AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0510450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510450 MtrunA17_Chr3g0115801 91.398 279 1 2 1 256 128 406 0.0 504
Msa0510450 MtrunA17_Chr8g0382201 72.760 279 53 2 1 256 207 485 1.64e-135 390
Msa0510450 MtrunA17_Chr3g0137941 35.766 274 141 5 1 253 134 393 4.49e-44 153
Msa0510450 MtrunA17_Chr3g0137941 32.804 189 108 5 64 250 121 292 6.62e-22 93.6
Msa0510450 MtrunA17_Chr3g0137941 26.744 172 101 3 2 150 229 398 2.18e-13 69.3
Msa0510450 MtrunA17_Chr1g0149111 35.379 277 138 6 1 253 151 410 1.80e-43 152
Msa0510450 MtrunA17_Chr1g0149111 31.818 198 118 4 58 254 132 313 3.46e-22 94.7
Msa0510450 MtrunA17_Chr4g0063561 34.672 274 144 5 1 253 135 394 1.24e-40 144
Msa0510450 MtrunA17_Chr4g0063561 30.457 197 117 5 61 254 119 298 4.29e-19 85.5
Msa0510450 MtrunA17_Chr7g0242311 36.820 239 126 7 17 253 141 356 2.70e-39 140
Msa0510450 MtrunA17_Chr7g0242311 28.188 149 101 3 17 164 232 375 1.45e-12 66.6
Msa0510450 MtrunA17_Chr4g0006851 36.864 236 124 7 17 250 143 355 4.04e-37 134
Msa0510450 MtrunA17_Chr4g0006851 26.111 180 109 3 78 250 102 264 5.23e-11 62.0
Msa0510450 MtrunA17_Chr4g0006851 26.712 146 101 3 17 161 234 374 5.33e-11 62.0
Msa0510450 MtrunA17_Chr8g0385571 32.740 281 150 7 1 256 239 505 5.66e-34 128
Msa0510450 MtrunA17_Chr8g0385571 29.167 192 120 4 65 254 227 404 2.43e-17 80.9
Msa0510450 MtrunA17_Chr7g0240341 29.252 294 151 7 1 253 37 314 1.04e-33 124
Msa0510450 MtrunA17_Chr7g0252401 31.071 280 153 7 1 256 219 482 2.80e-32 123
Msa0510450 MtrunA17_Chr7g0252401 30.366 191 119 4 62 250 204 382 3.33e-18 83.6
Msa0510450 MtrunA17_Chr8g0347451 30.693 303 154 8 1 256 63 356 3.83e-32 120
Msa0510450 MtrunA17_Chr5g0396801 31.353 303 150 9 1 256 50 341 5.40e-32 120
Msa0510450 MtrunA17_Chr5g0436041 29.795 292 150 7 1 253 46 321 5.40e-31 117
Msa0510450 MtrunA17_Chr3g0131501 31.317 281 154 9 1 256 217 483 8.02e-31 119
Msa0510450 MtrunA17_Chr3g0131501 28.125 192 122 4 65 254 205 382 1.86e-15 75.5
Msa0510450 MtrunA17_Chr6g0488081 29.252 294 153 6 1 255 31 308 7.22e-30 114
Msa0510450 MtrunA17_Chr6g0488081 25.854 205 120 5 63 250 17 206 9.23e-13 67.0
Msa0510450 MtrunA17_Chr3g0135861 27.907 301 155 5 1 255 47 331 6.41e-28 109
Msa0510450 MtrunA17_Chr4g0067231 29.084 251 149 8 17 247 78 319 1.35e-27 108
Msa0510450 MtrunA17_Chr4g0067231 25.463 216 129 5 57 250 2 207 4.35e-16 76.6
Msa0510450 MtrunA17_Chr4g0067231 29.221 154 88 4 15 148 175 327 4.37e-15 73.6
Msa0510450 MtrunA17_Chr2g0296061 27.413 259 157 9 17 254 77 325 2.48e-25 102
Msa0510450 MtrunA17_Chr2g0296061 27.922 154 90 3 15 148 174 326 7.66e-16 75.9
Msa0510450 MtrunA17_Chr2g0296061 24.885 217 129 6 56 250 2 206 7.10e-15 73.2
Msa0510450 MtrunA17_Chr4g0000261 24.658 292 167 6 3 256 80 356 5.21e-24 99.0
Msa0510450 MtrunA17_Chr4g0000261 28.426 197 123 4 64 250 65 253 2.93e-14 71.6
Msa0510450 MtrunA17_Chr8g0393031 28.622 283 141 11 1 241 30 293 1.15e-21 92.0
Msa0510450 MtrunA17_Chr3g0135801 28.425 292 153 11 1 252 46 321 2.76e-20 88.2
Msa0510450 MtrunA17_Chr6g0488341 26.613 248 146 5 17 255 13 233 5.25e-19 83.2
Msa0510450 MtrunA17_Chr5g0411411 25.287 261 168 7 6 253 51 297 6.26e-17 78.6
Msa0510450 MtrunA17_Chr6g0463041 26.070 257 131 5 42 255 2 242 7.69e-17 77.4
Msa0510450 MtrunA17_Chr8g0386871 26.639 244 158 5 16 256 365 590 1.66e-16 78.6
Msa0510450 MtrunA17_Chr8g0386871 26.887 212 123 7 49 250 299 488 5.77e-12 65.1
Msa0510450 MtrunA17_Chr8g0372531 24.900 249 174 6 15 255 64 307 2.23e-16 77.0
Msa0510450 MtrunA17_Chr2g0328891 27.197 239 142 8 17 241 121 341 1.93e-15 75.1
Msa0510450 MtrunA17_Chr7g0269701 31.472 197 111 8 67 253 24 206 2.94e-15 73.9
Msa0510450 MtrunA17_Chr7g0269701 26.860 242 154 7 17 249 75 302 2.07e-12 65.9
Msa0510450 MtrunA17_Chr4g0028531 31.387 137 84 3 17 145 169 303 3.50e-15 73.9
Msa0510450 MtrunA17_Chr4g0028531 24.111 253 154 10 14 247 64 297 2.32e-11 62.8
Msa0510450 MtrunA17_Chr8g0366791 24.521 261 170 8 6 253 51 297 9.72e-15 72.4
Msa0510450 MtrunA17_Chr5g0423111 28.685 251 155 6 11 249 63 301 2.89e-14 71.6
Msa0510450 MtrunA17_Chr5g0423111 28.108 185 111 6 76 253 33 202 3.48e-11 62.4
Msa0510450 MtrunA17_Chr4g0040341 26.778 239 143 9 17 241 130 350 1.78e-13 69.3
Msa0510450 MtrunA17_Chr1g0195101 25.896 251 160 8 13 253 69 303 2.78e-13 68.6
Msa0510450 MtrunA17_Chr1g0195101 26.984 189 111 7 76 253 31 203 5.76e-11 61.6
Msa0510450 MtrunA17_Chr8g0383321 32.124 193 99 7 60 251 47 208 3.82e-13 68.2
Msa0510450 MtrunA17_Chr3g0088301 24.686 239 148 8 17 241 148 368 1.09e-12 67.0
Msa0510450 MtrunA17_Chr1g0201361 28.571 238 124 9 31 255 7 211 5.56e-12 64.7
Msa0510450 MtrunA17_Chr6g0455381 24.380 242 172 5 17 250 65 303 9.98e-12 63.9
Msa0510450 MtrunA17_Chr4g0004571 25.510 196 128 5 59 250 10 191 1.01e-11 63.9
Msa0510450 MtrunA17_Chr8g0352031 24.167 240 149 7 17 241 123 344 2.01e-11 63.2
Msa0510450 MtrunA17_Chr7g0219891 23.016 252 163 8 17 250 69 307 4.95e-11 62.0
Msa0510450 MtrunA17_Chr1g0200171 27.206 136 97 2 17 152 658 791 5.38e-11 62.4
Msa0510450 MtrunA17_Chr3g0126331 25.194 258 164 9 17 254 140 388 8.06e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510450 AT5G64970.2 72.760 279 53 2 1 256 23 301 1.26e-142 402
Msa0510450 AT5G64970.1 72.760 279 53 2 1 256 147 425 1.26e-141 404
Msa0510450 AT5G64970.3 71.318 258 51 2 1 235 147 404 1.60e-126 365
Msa0510450 AT1G78180.1 70.609 279 59 2 1 256 140 418 2.58e-124 360
Msa0510450 AT4G32400.1 33.577 274 147 5 1 253 126 385 1.24e-40 144
Msa0510450 AT4G32400.1 33.508 191 110 5 61 250 110 284 1.68e-21 92.8
Msa0510450 AT3G55640.1 30.717 293 148 8 1 254 50 326 6.94e-37 133
Msa0510450 AT3G55640.4 30.717 293 148 8 1 254 50 326 6.94e-37 133
Msa0510450 AT3G53940.1 30.375 293 147 7 1 253 85 360 2.50e-35 129
Msa0510450 AT3G51870.1 33.898 236 131 8 17 250 145 357 2.61e-35 130
Msa0510450 AT3G51870.1 27.027 148 104 3 17 164 236 379 3.43e-11 63.2
Msa0510450 AT5G01500.1 36.017 236 126 8 17 250 173 385 7.73e-35 129
Msa0510450 AT5G01500.1 27.778 180 106 4 78 250 132 294 4.61e-11 62.8
Msa0510450 AT2G37890.1 29.693 293 149 9 1 253 57 332 1.47e-34 127
Msa0510450 AT4G26180.1 29.630 297 149 9 1 255 33 311 5.13e-33 123
Msa0510450 AT5G51050.1 30.605 281 153 6 1 256 235 498 5.55e-33 125
Msa0510450 AT5G51050.1 29.101 189 118 5 65 250 223 398 1.29e-14 73.6
Msa0510450 AT4G01100.3 31.023 303 153 8 1 256 4 297 1.49e-32 121
Msa0510450 AT4G01100.1 31.023 303 153 8 1 256 54 347 3.35e-32 121
Msa0510450 AT4G01100.2 30.599 317 150 9 1 256 54 361 3.53e-30 116
Msa0510450 AT5G61810.2 29.749 279 153 7 1 256 77 335 4.27e-30 115
Msa0510450 AT5G07320.1 30.403 273 147 7 1 250 221 473 1.05e-29 116
Msa0510450 AT5G61810.1 29.749 279 153 7 1 256 220 478 3.87e-29 114
Msa0510450 AT1G14560.1 29.333 300 151 7 1 255 39 322 2.52e-27 107
Msa0510450 AT3G20240.1 26.298 289 160 7 3 253 66 339 1.61e-26 105
Msa0510450 AT3G20240.1 27.225 191 131 3 65 250 52 239 6.98e-16 76.6
Msa0510450 AT4G26180.2 28.520 277 138 9 1 235 33 291 3.81e-26 103
Msa0510450 AT4G26180.2 25.123 203 124 3 63 250 19 208 5.97e-12 64.7
Msa0510450 AT5G48970.2 27.413 259 160 7 17 254 13 264 2.04e-25 101
Msa0510450 AT5G48970.2 28.289 152 98 4 100 250 1 142 5.98e-14 70.1
Msa0510450 AT5G48970.2 25.641 156 92 4 16 148 111 265 2.39e-13 68.6
Msa0510450 AT5G48970.1 27.413 259 160 7 17 254 84 335 7.93e-25 101
Msa0510450 AT5G48970.1 28.500 200 117 7 67 250 24 213 4.52e-16 77.0
Msa0510450 AT5G48970.1 25.641 156 92 4 16 148 182 336 4.73e-13 68.2
Msa0510450 AT3G55640.2 33.333 177 86 4 1 145 50 226 9.10e-24 96.7
Msa0510450 AT3G55640.3 33.333 177 86 4 1 145 50 226 9.10e-24 96.7
Msa0510450 AT3G53940.2 31.383 188 96 4 1 155 85 272 2.79e-22 93.6
Msa0510450 AT3G53940.2 27.805 205 131 6 56 250 61 258 2.63e-11 62.8
Msa0510450 AT1G14560.2 30.085 236 113 5 1 200 39 258 3.34e-21 90.9
Msa0510450 AT1G14560.2 29.167 168 90 4 99 250 62 216 9.86e-13 67.0
Msa0510450 AT3G21390.2 24.096 249 172 5 16 248 100 347 4.01e-21 91.3
Msa0510450 AT3G21390.2 27.111 225 134 8 46 250 16 230 3.40e-17 80.5
Msa0510450 AT3G21390.1 24.900 249 168 6 17 248 79 325 4.30e-21 90.9
Msa0510450 AT3G21390.1 26.768 198 121 6 67 250 21 208 1.11e-15 75.9
Msa0510450 AT3G21390.1 24.667 150 89 4 15 140 176 325 4.07e-11 62.8
Msa0510450 AT5G56450.1 26.780 295 158 9 1 252 46 325 1.27e-20 89.7
Msa0510450 AT1G14560.3 29.412 238 127 6 43 255 3 224 2.57e-19 84.3
Msa0510450 AT4G11440.1 28.980 245 155 5 16 255 375 605 7.34e-19 85.9
Msa0510450 AT4G11440.1 28.054 221 121 6 48 250 298 498 1.09e-13 70.9
Msa0510450 AT4G11440.2 28.980 245 155 5 16 255 375 605 7.34e-19 85.9
Msa0510450 AT4G11440.2 28.054 221 121 6 48 250 298 498 1.09e-13 70.9
Msa0510450 AT5G26200.1 24.521 261 164 7 15 250 82 334 7.07e-18 82.0
Msa0510450 AT5G46800.2 25.094 267 164 7 6 253 50 299 1.75e-16 77.8
Msa0510450 AT5G46800.3 25.094 267 164 7 6 253 50 299 1.75e-16 77.8
Msa0510450 AT5G46800.1 25.094 267 164 7 6 253 50 299 1.75e-16 77.8
Msa0510450 AT1G25380.1 30.579 242 145 7 17 249 75 302 2.72e-16 77.8
Msa0510450 AT1G25380.1 32.258 186 98 8 76 250 33 201 7.77e-13 67.8
Msa0510450 AT1G25380.2 30.579 242 145 7 17 249 75 302 2.72e-16 77.8
Msa0510450 AT1G25380.2 32.258 186 98 8 76 250 33 201 7.77e-13 67.8
Msa0510450 AT5G17400.1 26.639 244 145 8 13 241 65 289 1.94e-15 74.7
Msa0510450 AT5G66380.1 25.397 252 166 7 15 254 60 301 9.82e-15 72.8
Msa0510450 AT4G39460.2 32.804 189 95 6 60 247 53 210 1.46e-14 72.4
Msa0510450 AT4G39460.1 32.804 189 95 6 60 247 53 210 1.46e-14 72.4
Msa0510450 AT4G39460.3 32.804 189 95 6 60 247 53 210 1.46e-14 72.4
Msa0510450 AT4G28390.1 25.941 239 145 7 17 241 138 358 7.72e-14 70.9
Msa0510450 AT4G28390.2 25.941 239 145 7 17 241 138 358 7.72e-14 70.9
Msa0510450 AT2G47490.1 30.688 189 103 8 76 253 29 200 1.93e-13 69.3
Msa0510450 AT2G47490.1 26.613 248 159 9 11 249 63 296 7.10e-11 61.6
Msa0510450 AT4G27940.1 25.869 259 158 7 17 253 161 407 8.18e-13 67.8
Msa0510450 AT2G30160.1 28.692 237 149 6 19 250 97 318 1.08e-12 67.4
Msa0510450 AT5G13490.1 24.583 240 148 8 17 241 143 364 1.11e-12 67.4
Msa0510450 AT5G13490.2 24.583 240 148 8 17 241 143 364 1.11e-12 67.4
Msa0510450 AT5G58970.1 21.951 246 170 3 17 256 72 301 1.86e-12 66.2
Msa0510450 AT3G08580.2 23.750 240 150 7 17 241 139 360 4.02e-12 65.9
Msa0510450 AT3G08580.1 23.750 240 150 7 17 241 139 360 4.02e-12 65.9
Msa0510450 AT1G34065.2 30.102 196 103 7 62 255 72 235 8.61e-12 64.7
Msa0510450 AT1G34065.1 30.102 196 103 7 62 255 79 242 9.21e-12 64.7
Msa0510450 AT5G01340.1 22.892 249 155 8 17 247 64 293 4.83e-11 62.4
Msa0510450 AT1G07030.1 27.311 238 148 8 19 250 95 313 6.34e-11 62.0
Msa0510450 AT3G54110.1 23.661 224 146 5 17 232 70 276 9.31e-11 61.2

Find 76 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGGTTGAAAACATAATTT+TGG 0.224614 3_4:-59485717 Msa0510450:three_prime_UTR
ACTTATTCCCAGCTTATTAC+AGG 0.250299 3_4:-59489595 Msa0510450:intron
CTCTACCAGCAGAAAGCTTT+TGG 0.255138 3_4:-59485645 Msa0510450:three_prime_UTR
CAAGCAAGTTCCTTTGCTTT+AGG 0.259883 3_4:-59485475 Msa0510450:three_prime_UTR
AGCAATAAACCTCTCAAAAT+TGG 0.279930 3_4:+59490723 None:intergenic
AGTAGCTTATCGGTTATTCT+TGG 0.304069 3_4:-59485439 Msa0510450:three_prime_UTR
CTTGATTCTTTGCTTTCCTT+CGG 0.314639 3_4:+59489848 None:intergenic
CCATGCAACAATGTCCTTAC+TGG 0.315349 3_4:+59489771 None:intergenic
CGAGAATATGATATTGTTGT+TGG 0.316307 3_4:-59485785 Msa0510450:three_prime_UTR
CATATTCTCGCTTATAAATC+AGG 0.331698 3_4:+59485798 None:intergenic
GAAACTTTGGGTGGTGTAAT+TGG 0.334173 3_4:-59490011 Msa0510450:CDS
TTTATTGCTGGTGCTGCTGC+TGG 0.342340 3_4:-59490709 Msa0510450:CDS
TCCGCCAGGTGCCACTATCT+TGG 0.344178 3_4:+59490034 None:intergenic
TAATTCTTAAAGTAGCTTAT+CGG 0.346289 3_4:-59485449 Msa0510450:three_prime_UTR
TTGATTCTTTGCTTTCCTTC+GGG 0.346752 3_4:+59489849 None:intergenic
ATATTTGATGTTGGCCTTTG+AGG 0.350606 3_4:-59485735 Msa0510450:three_prime_UTR
TTGTTGCATGGGGCTATTGC+TGG 0.364598 3_4:-59489759 Msa0510450:CDS
CGGTTCGCAGAATATTTAGA+AGG 0.372550 3_4:+59490827 None:intergenic
AGCAAAGGAACTTGCTTGCT+TGG 0.376039 3_4:+59485480 None:intergenic
TGCCTCCTCACCACTTCAAA+TGG 0.377301 3_4:+59489711 None:intergenic
GGCACCTGGCGGAGAAACTT+TGG 0.384109 3_4:-59490024 Msa0510450:CDS
AAACAACTACTTAGATTCTC+TGG 0.390111 3_4:-59490760 Msa0510450:CDS
CTTCAGTTTGAATCATGTAT+TGG 0.396950 3_4:+59489982 None:intergenic
TGCAACTAAGTTTATGTGCC+TGG 0.424513 3_4:+59485600 None:intergenic
GTAGCTTATCGGTTATTCTT+GGG 0.427051 3_4:-59485438 Msa0510450:three_prime_UTR
CCATAAAAGACTGCACTAGA+AGG 0.429795 3_4:+59489909 None:intergenic
GCACCTGGCGGAGAAACTTT+GGG 0.438440 3_4:-59490023 Msa0510450:CDS
GGCATTTCAGCCCTCTATGC+AGG 0.455367 3_4:-59489618 Msa0510450:CDS
ATTTAATACCTGTAATAAGC+TGG 0.455738 3_4:+59489587 None:intergenic
AAGAACTTAATTTAGTAGAC+TGG 0.463964 3_4:+59489673 None:intergenic
ACGGAATAAGCATTAGAATC+AGG 0.474678 3_4:+59485566 None:intergenic
AGCTAGAGTTGGGGCCAGTA+AGG 0.478052 3_4:-59489785 Msa0510450:intron
CAGTAAGGACATTGTTGCAT+GGG 0.487811 3_4:-59489770 Msa0510450:CDS
GCATTGGCTATATTTGATGT+TGG 0.490417 3_4:-59485744 Msa0510450:three_prime_UTR
ACCACTTGAAAGACTTAAGC+TGG 0.503394 3_4:-59490941 Msa0510450:CDS
CCAGTAAGGACATTGTTGCA+TGG 0.504976 3_4:-59489771 Msa0510450:CDS
GAATATGCATAAACATGGGC+AGG 0.505465 3_4:-59489826 Msa0510450:CDS
GGGAATAAGTCCTGCATAGA+GGG 0.511616 3_4:+59489608 None:intergenic
GCCTCCTCACCACTTCAAAT+GGG 0.526042 3_4:+59489712 None:intergenic
AAGCTGGAATATATTGTTCG+TGG 0.526261 3_4:-59490925 Msa0510450:intron
ATAGATTCGGACCAAGATAG+TGG 0.529404 3_4:-59490045 Msa0510450:intron
ACTTAGATTCTCTGGAAATG+AGG 0.532399 3_4:-59490752 Msa0510450:CDS
TTTAATACCTGTAATAAGCT+GGG 0.532838 3_4:+59489588 None:intergenic
TAAGCATTAGAATCAGGATC+TGG 0.534571 3_4:+59485572 None:intergenic
CCAGTCCAAAAGCTTTCTGC+TGG 0.539839 3_4:+59485640 None:intergenic
TGAAGTTTCATGAACAGAGA+AGG 0.548830 3_4:-59485367 Msa0510450:three_prime_UTR
ATATGATATTGTTGTTGGAA+TGG 0.554892 3_4:-59485780 Msa0510450:three_prime_UTR
GCAACTAAGTTTATGTGCCT+GGG 0.555908 3_4:+59485601 None:intergenic
ATCAAGAATATGCATAAACA+TGG 0.565369 3_4:-59489831 Msa0510450:CDS
TGGGAATAAGTCCTGCATAG+AGG 0.566782 3_4:+59489607 None:intergenic
CCACCCAAAGTTTCTCCGCC+AGG 0.569871 3_4:+59490020 None:intergenic
AGAATTAAAACCTAAAGCAA+AGG 0.572591 3_4:+59485465 None:intergenic
GATTGTTCTCAAAGTAGAGT+AGG 0.575263 3_4:-59485868 Msa0510450:exon
AGTACCATCACTTATAAGCA+TGG 0.578373 3_4:-59489934 Msa0510450:CDS
GCTACAACTCAAGGTTTGAG+AGG 0.579884 3_4:-59490865 Msa0510450:intron
CAATACATGATTCAAACTGA+AGG 0.582238 3_4:-59489981 Msa0510450:CDS
TCCAGCTTAAGTCTTTCAAG+TGG 0.587617 3_4:+59490940 None:intergenic
GGAGCCATGCTTATAAGTGA+TGG 0.588027 3_4:+59489930 None:intergenic
TTTGTCAAAATTGTGGAACA+AGG 0.592430 3_4:-59489642 Msa0510450:CDS
TCTTATCTGCATTCACCCGA+AGG 0.594846 3_4:-59489864 Msa0510450:CDS
ACCCATTTGAAGTGGTGAGG+AGG 0.596577 3_4:-59489713 Msa0510450:CDS
TGCTACATACCCATTTGAAG+TGG 0.602917 3_4:-59489721 Msa0510450:CDS
CGGACCAAGATAGTGGCACC+TGG 0.603892 3_4:-59490038 Msa0510450:CDS
TCACCACGTACAGTATCAAG+TGG 0.614556 3_4:+59490661 None:intergenic
CTAAAATTAACAGCTTTGAA+CGG 0.620147 3_4:+59490802 None:intergenic
GTCAAAATTGTGGAACAAGG+AGG 0.624778 3_4:-59489639 Msa0510450:CDS
CACGTACAGTATCAAGTGGA+AGG 0.625172 3_4:+59490665 None:intergenic
AAGTAACTAATTGATGCTGA+AGG 0.627682 3_4:+59485909 None:intergenic
CCTTTGATCAGCTAGAGTTG+GGG 0.635456 3_4:-59489794 Msa0510450:intron
TCAAGAATATGCATAAACAT+GGG 0.635732 3_4:-59489830 Msa0510450:CDS
CATACCCATTTGAAGTGGTG+AGG 0.653731 3_4:-59489716 Msa0510450:CDS
AGTAAGGACATTGTTGCATG+GGG 0.675534 3_4:-59489769 Msa0510450:CDS
CCTGGCGGAGAAACTTTGGG+TGG 0.690555 3_4:-59490020 Msa0510450:CDS
ACCAAGATAGTGGCACCTGG+CGG 0.692494 3_4:-59490035 Msa0510450:CDS
ATTAACAGCTTTGAACGGAG+CGG 0.702918 3_4:+59490807 None:intergenic
GCTTTACAGTCAATATACCC+AGG 0.713430 3_4:-59485618 Msa0510450:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTATTTTTCTTGTTT+TGG + chr3_4:59488981-59489000 None:intergenic 10.0%
!!! TTTTCACAAATAAATTTATT+TGG - chr3_4:59489045-59489064 Msa0510450:intron 10.0%
!! TTTCACAAATAAATTTATTT+GGG - chr3_4:59489046-59489065 Msa0510450:intron 10.0%
!!! GGTTTTTATAATAAATTTTT+TGG - chr3_4:59490052-59490071 Msa0510450:intron 10.0%
!!! ATTGATCTTATGAAATTTTA+CGG + chr3_4:59487095-59487114 None:intergenic 15.0%
!! ATAAAATATGTTTGTGAAAT+TGG + chr3_4:59487364-59487383 None:intergenic 15.0%
!! TTCACAAATAAATTTATTTG+GGG - chr3_4:59489047-59489066 Msa0510450:intron 15.0%
!! AAAAATAAAAATAATGCTTG+TGG - chr3_4:59489319-59489338 Msa0510450:intron 15.0%
!!! AATAAATTTTTTGGAAATGT+TGG - chr3_4:59490061-59490080 Msa0510450:intron 15.0%
!! CAGAAAAATAAATAAATGAA+AGG + chr3_4:59490305-59490324 None:intergenic 15.0%
!!! TCTTTAACTTTCTTTAGTTA+AGG - chr3_4:59485800-59485819 Msa0510450:three_prime_UTR 20.0%
!!! TAGGTATAATTTGTTTCATA+TGG - chr3_4:59485990-59486009 Msa0510450:intron 20.0%
!! AATAATCAATATGAACAGAA+TGG + chr3_4:59486860-59486879 None:intergenic 20.0%
!! AATGTGATTAATGTTCATAT+AGG - chr3_4:59486925-59486944 Msa0510450:intron 20.0%
!! ATGTGATTAATGTTCATATA+GGG - chr3_4:59486926-59486945 Msa0510450:intron 20.0%
!!! TTGATCTTATGAAATTTTAC+GGG + chr3_4:59487094-59487113 None:intergenic 20.0%
!! AATACATTTCCATGATAAAA+AGG + chr3_4:59487138-59487157 None:intergenic 20.0%
!!! TTTCAGTATCATAGTATTTT+GGG + chr3_4:59487425-59487444 None:intergenic 20.0%
!! TATGATACTGAAACTTAATT+AGG - chr3_4:59487432-59487451 Msa0510450:intron 20.0%
!!! TAATGCTAATCTTCATTTTA+AGG - chr3_4:59488509-59488528 Msa0510450:intron 20.0%
!! AGTGCAATTAAATTACTTAA+AGG + chr3_4:59488763-59488782 None:intergenic 20.0%
!! TTTAAGTAATTTAATTGCAC+TGG - chr3_4:59488762-59488781 Msa0510450:intron 20.0%
!!! AAAATGAGTATGATTTTACA+AGG - chr3_4:59489527-59489546 Msa0510450:intron 20.0%
!! TTGACACAATTAAATAACTT+AGG - chr3_4:59490261-59490280 Msa0510450:intron 20.0%
!! TAATTCTTAAAGTAGCTTAT+CGG - chr3_4:59490866-59490885 Msa0510450:intron 20.0%
!!! CTAAAATTAACAGCTTTGAA+CGG + chr3_4:59485516-59485535 None:intergenic 25.0%
! ATGTGCAAGTTTATTCAATT+GGG + chr3_4:59485715-59485734 None:intergenic 25.0%
! AAACTATTTATGCAAAACAG+AGG + chr3_4:59485957-59485976 None:intergenic 25.0%
! AACAGGATATCAAACATATT+TGG + chr3_4:59486073-59486092 None:intergenic 25.0%
! TGTTGTAACATGCATTTATT+TGG - chr3_4:59486130-59486149 Msa0510450:intron 25.0%
! ATCAAGAATATGCATAAACA+TGG - chr3_4:59486484-59486503 Msa0510450:intron 25.0%
! TCAAGAATATGCATAAACAT+GGG - chr3_4:59486485-59486504 Msa0510450:intron 25.0%
! AAGAACTTAATTTAGTAGAC+TGG + chr3_4:59486645-59486664 None:intergenic 25.0%
! TTTAATACCTGTAATAAGCT+GGG + chr3_4:59486730-59486749 None:intergenic 25.0%
! ATTTAATACCTGTAATAAGC+TGG + chr3_4:59486731-59486750 None:intergenic 25.0%
!!! GTTTTTTGACTATTGCTATT+AGG - chr3_4:59487059-59487078 Msa0510450:intron 25.0%
!! TGATCTTATGAAATTTTACG+GGG + chr3_4:59487093-59487112 None:intergenic 25.0%
!! TGATAAAAAGGTTTTTGCTT+TGG + chr3_4:59487126-59487145 None:intergenic 25.0%
!! AAGCAAAAACCTTTTTATCA+TGG - chr3_4:59487126-59487145 Msa0510450:intron 25.0%
! ATCATGGAAATGTATTTACT+AGG - chr3_4:59487142-59487161 Msa0510450:intron 25.0%
! TCATGGAAATGTATTTACTA+GGG - chr3_4:59487143-59487162 Msa0510450:intron 25.0%
! ACCATGATATAAAATCTATG+CGG - chr3_4:59487166-59487185 Msa0510450:intron 25.0%
! AATATGTTTGTGAAATTGGT+AGG + chr3_4:59487360-59487379 None:intergenic 25.0%
!! GTTTCAGTATCATAGTATTT+TGG + chr3_4:59487426-59487445 None:intergenic 25.0%
!! TGGCATTTATGAATTTTGTA+TGG + chr3_4:59487481-59487500 None:intergenic 25.0%
!! GACAGTTTTCACAAATTAAT+AGG - chr3_4:59487742-59487761 Msa0510450:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr3_4:59488173-59488192 Msa0510450:intron 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + chr3_4:59488298-59488317 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr3_4:59488315-59488334 Msa0510450:intron 25.0%
!!! TTTTATGTTTTTTCCCAACT+AGG - chr3_4:59488792-59488811 Msa0510450:intron 25.0%
! ACAAATAAATTTATTTGGGG+TGG - chr3_4:59489050-59489069 Msa0510450:intron 25.0%
!! AACTAGACCTTTTTCTTTAA+TGG + chr3_4:59489202-59489221 None:intergenic 25.0%
! GAGTCAAGATTATAATTTAG+TGG + chr3_4:59489278-59489297 None:intergenic 25.0%
!! AGGCTTTTCTATTATAAAAC+CGG + chr3_4:59489365-59489384 None:intergenic 25.0%
! AGAGAAATATGGAGAAAAAA+GGG + chr3_4:59489693-59489712 None:intergenic 25.0%
!! TTTTATGTTCTTTTGCAAGA+AGG + chr3_4:59490234-59490253 None:intergenic 25.0%
!!! ATGAGATCATCAGTTTTATA+CGG - chr3_4:59490480-59490499 Msa0510450:intron 25.0%
!! ATATGATATTGTTGTTGGAA+TGG - chr3_4:59490535-59490554 Msa0510450:intron 25.0%
!! AATTATGTTTTCAACCTCAA+AGG + chr3_4:59490597-59490616 None:intergenic 25.0%
!! TGAGGTTGAAAACATAATTT+TGG - chr3_4:59490598-59490617 Msa0510450:intron 25.0%
! AGTTAACAAAAATGTGTAGA+CGG + chr3_4:59490771-59490790 None:intergenic 25.0%
!!! GTTGGTTTTTATCATTAGTA+TGG - chr3_4:59490807-59490826 Msa0510450:CDS 25.0%
! AGAATTAAAACCTAAAGCAA+AGG + chr3_4:59490853-59490872 None:intergenic 25.0%
AAACAACTACTTAGATTCTC+TGG - chr3_4:59485555-59485574 Msa0510450:three_prime_UTR 30.0%
AGCAATAAACCTCTCAAAAT+TGG + chr3_4:59485595-59485614 None:intergenic 30.0%
!! AATTTTGAGAGGTTTATTGC+TGG - chr3_4:59485594-59485613 Msa0510450:three_prime_UTR 30.0%
CATGTGCAAGTTTATTCAAT+TGG + chr3_4:59485716-59485735 None:intergenic 30.0%
ATGAACATGACTATTGATCT+TGG - chr3_4:59485733-59485752 Msa0510450:three_prime_UTR 30.0%
TCTTTAGTTAAGGAGACATT+TGG - chr3_4:59485810-59485829 Msa0510450:three_prime_UTR 30.0%
AGGAACATATATGGATACAA+GGG + chr3_4:59485937-59485956 None:intergenic 30.0%
!! ATTATGGAAGTACTTCAAAC+AGG + chr3_4:59486090-59486109 None:intergenic 30.0%
! TGTTTGAAGTACTTCCATAA+TGG - chr3_4:59486089-59486108 Msa0510450:intron 30.0%
TCTTACAACACATACCATTA+TGG + chr3_4:59486106-59486125 None:intergenic 30.0%
AAATGCATGTTACATGATTC+AGG + chr3_4:59486177-59486196 None:intergenic 30.0%
TACTGTGTGTCTTATAGATT+CGG - chr3_4:59486257-59486276 Msa0510450:intron 30.0%
CTTCAGTTTGAATCATGTAT+TGG + chr3_4:59486336-59486355 None:intergenic 30.0%
CAATACATGATTCAAACTGA+AGG - chr3_4:59486334-59486353 Msa0510450:intron 30.0%
! AGCAACTTTTGTCAAAATTG+TGG - chr3_4:59486666-59486685 Msa0510450:intron 30.0%
TTTGTCAAAATTGTGGAACA+AGG - chr3_4:59486673-59486692 Msa0510450:intron 30.0%
!! TTTTGAATTCCTATTTGCTG+AGG - chr3_4:59486809-59486828 Msa0510450:intron 30.0%
GTTATAATTCCTCAGCAAAT+AGG + chr3_4:59486821-59486840 None:intergenic 30.0%
GCACATGGTAAAATGTAAAA+TGG + chr3_4:59486973-59486992 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr3_4:59487835-59487854 None:intergenic 30.0%
TTACACGGTTTAGATATCTT+GGG - chr3_4:59487838-59487857 Msa0510450:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr3_4:59488169-59488188 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr3_4:59488320-59488339 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr3_4:59488355-59488374 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr3_4:59488359-59488378 Msa0510450:intron 30.0%
TCTTTGATAGAACATTATGG+CGG - chr3_4:59488362-59488381 Msa0510450:intron 30.0%
!! AATCTTCATTTTAAGGAACC+AGG - chr3_4:59488516-59488535 Msa0510450:intron 30.0%
GCTAAGAAATGTAAATTGGT+AGG + chr3_4:59488646-59488665 None:intergenic 30.0%
GCATGCTAAGAAATGTAAAT+TGG + chr3_4:59488650-59488669 None:intergenic 30.0%
GTGCATGTTATTAGAGTTAA+AGG + chr3_4:59488819-59488838 None:intergenic 30.0%
TTCTCTGTGTACTTACTATA+AGG - chr3_4:59488945-59488964 Msa0510450:intron 30.0%
GGAAACTCAAAAATTGTCAA+CGG + chr3_4:59489171-59489190 None:intergenic 30.0%
! TTTTCTTTAATGGAGATGGA+CGG + chr3_4:59489192-59489211 None:intergenic 30.0%
TCCATCTCCATTAAAGAAAA+AGG - chr3_4:59489192-59489211 Msa0510450:intron 30.0%
! ACCTTTTTCTTTAATGGAGA+TGG + chr3_4:59489196-59489215 None:intergenic 30.0%
AGTTAGTTGTTTGATGTTGA+TGG - chr3_4:59489218-59489237 Msa0510450:intron 30.0%
! GGCTTTTCTATTATAAAACC+GGG + chr3_4:59489364-59489383 None:intergenic 30.0%
GAAATGGATAAAAATGATGG+AGG + chr3_4:59489385-59489404 None:intergenic 30.0%
GTGGAAATGGATAAAAATGA+TGG + chr3_4:59489388-59489407 None:intergenic 30.0%
ATGGAGTAGTTTCAATTTCA+AGG + chr3_4:59489451-59489470 None:intergenic 30.0%
! GATTTTACAAGGATATTCAG+TGG - chr3_4:59489538-59489557 Msa0510450:intron 30.0%
CAGAGAAATATGGAGAAAAA+AGG + chr3_4:59489694-59489713 None:intergenic 30.0%
TAGAAAGAAGCAGAGAAATA+TGG + chr3_4:59489704-59489723 None:intergenic 30.0%
AGAAAACTCAAAATACAGAG+AGG + chr3_4:59489871-59489890 None:intergenic 30.0%
! TGTTTCTCAGTTTCTGTTTT+TGG - chr3_4:59489931-59489950 Msa0510450:CDS 30.0%
AAAGAAGCAAAACTCTGATT+TGG - chr3_4:59490031-59490050 Msa0510450:CDS 30.0%
!!! TTTTTTGGAAATGTTGGACT+AGG - chr3_4:59490067-59490086 Msa0510450:intron 30.0%
GAAAGGAAAAATTCATCATG+TGG + chr3_4:59490288-59490307 None:intergenic 30.0%
!!! TGTTTTGATTTCTCTTTCTC+AGG - chr3_4:59490378-59490397 Msa0510450:intron 30.0%
AAGTAACTAATTGATGCTGA+AGG + chr3_4:59490409-59490428 None:intergenic 30.0%
CATATTCTCGCTTATAAATC+AGG + chr3_4:59490520-59490539 None:intergenic 30.0%
CGAGAATATGATATTGTTGT+TGG - chr3_4:59490530-59490549 Msa0510450:intron 30.0%
! TGGTAATTTTCAACTTGCAT+TGG - chr3_4:59490555-59490574 Msa0510450:intron 30.0%
!!! TGATGACTTTTTCAGAAGTA+TGG + chr3_4:59490633-59490652 None:intergenic 30.0%
! TACTTCTGAAAAAGTCATCA+CGG - chr3_4:59490633-59490652 Msa0510450:intron 30.0%
GATAAAAACCAACTGCAAAT+GGG + chr3_4:59490800-59490819 None:intergenic 30.0%
TGATAAAAACCAACTGCAAA+TGG + chr3_4:59490801-59490820 None:intergenic 30.0%
AAGCTGGAATATATTGTTCG+TGG - chr3_4:59485390-59485409 Msa0510450:three_prime_UTR 35.0%
AAGTCAATTGCTACAACTCA+AGG - chr3_4:59485441-59485460 Msa0510450:three_prime_UTR 35.0%
! ACTTAGATTCTCTGGAAATG+AGG - chr3_4:59485563-59485582 Msa0510450:three_prime_UTR 35.0%
! AGGAAACTACCAATTTTGAG+AGG - chr3_4:59485583-59485602 Msa0510450:three_prime_UTR 35.0%
! TTAAGGAGACATTTGGAGTT+TGG - chr3_4:59485817-59485836 Msa0510450:three_prime_UTR 35.0%
! GAAACGTCATGCTTTATTGA+AGG + chr3_4:59485888-59485907 None:intergenic 35.0%
GAACATATATGGATACAAGG+GGG + chr3_4:59485935-59485954 None:intergenic 35.0%
GGAACATATATGGATACAAG+GGG + chr3_4:59485936-59485955 None:intergenic 35.0%
GAGGAACATATATGGATACA+AGG + chr3_4:59485938-59485957 None:intergenic 35.0%
GCAAAACAGAGGAACATATA+TGG + chr3_4:59485946-59485965 None:intergenic 35.0%
ACACATTCAGCATAATCACT+TGG - chr3_4:59486228-59486247 Msa0510450:intron 35.0%
! AGGCATCTTTTCTCTATACA+AGG - chr3_4:59486354-59486373 Msa0510450:intron 35.0%
! GGCATCTTTTCTCTATACAA+GGG - chr3_4:59486355-59486374 Msa0510450:intron 35.0%
AGTACCATCACTTATAAGCA+TGG - chr3_4:59486381-59486400 Msa0510450:intron 35.0%
TTGATTCTTTGCTTTCCTTC+GGG + chr3_4:59486469-59486488 None:intergenic 35.0%
CTTGATTCTTTGCTTTCCTT+CGG + chr3_4:59486470-59486489 None:intergenic 35.0%
ACTTATTCCCAGCTTATTAC+AGG - chr3_4:59486720-59486739 Msa0510450:intron 35.0%
AACATGACATTCTTGTGTTG+AGG + chr3_4:59487034-59487053 None:intergenic 35.0%
! GCCGCATAGATTTTATATCA+TGG + chr3_4:59487170-59487189 None:intergenic 35.0%
! ATAGAAGCATGCTTCCATTT+AGG - chr3_4:59487229-59487248 Msa0510450:intron 35.0%
! TCCTTGACGTTTTATATCCA+TGG + chr3_4:59487518-59487537 None:intergenic 35.0%
ACAAAAGCAGAACTCAAAAC+AGG - chr3_4:59487686-59487705 Msa0510450:intron 35.0%
CAAAAGCAGAACTCAAAACA+GGG - chr3_4:59487687-59487706 Msa0510450:intron 35.0%
AGCATAGTGACATGAAATGA+CGG - chr3_4:59487795-59487814 Msa0510450:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr3_4:59487823-59487842 Msa0510450:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr3_4:59487834-59487853 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr3_4:59487836-59487855 None:intergenic 35.0%
GTTACACGGTTTAGATATCT+TGG - chr3_4:59487837-59487856 Msa0510450:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr3_4:59487865-59487884 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr3_4:59487898-59487917 Msa0510450:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr3_4:59487963-59487982 Msa0510450:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr3_4:59487972-59487991 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr3_4:59487976-59487995 Msa0510450:intron 35.0%
AGACTAGACATGATAGGATT+AGG - chr3_4:59488111-59488130 Msa0510450:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr3_4:59488162-59488181 Msa0510450:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr3_4:59488182-59488201 Msa0510450:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr3_4:59488187-59488206 Msa0510450:intron 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr3_4:59488239-59488258 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr3_4:59488240-59488259 Msa0510450:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr3_4:59488243-59488262 Msa0510450:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr3_4:59488327-59488346 Msa0510450:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr3_4:59488339-59488358 Msa0510450:intron 35.0%
GAAATGTAAATTGGTAGGAG+CGG + chr3_4:59488641-59488660 None:intergenic 35.0%
TAGAGTTAAAGGACCTAGTT+GGG + chr3_4:59488808-59488827 None:intergenic 35.0%
TTAGAGTTAAAGGACCTAGT+TGG + chr3_4:59488809-59488828 None:intergenic 35.0%
! AAGCTAGCCAAAATTTTCTG+AGG - chr3_4:59488852-59488871 Msa0510450:intron 35.0%
! AGCTAGCCAAAATTTTCTGA+GGG - chr3_4:59488853-59488872 Msa0510450:intron 35.0%
!!! GTTTTGATTGGTTAGGTTAG+AGG + chr3_4:59489422-59489441 None:intergenic 35.0%
AGTTTCAATTTCAAGGTGGA+TGG + chr3_4:59489444-59489463 None:intergenic 35.0%
GAGTAGTTTCAATTTCAAGG+TGG + chr3_4:59489448-59489467 None:intergenic 35.0%
GAAATATGGAGAAAAAAGGG+AGG + chr3_4:59489690-59489709 None:intergenic 35.0%
AACTATCATCCTCCTTTACA+CGG + chr3_4:59489772-59489791 None:intergenic 35.0%
! TAGTTAGTGATGGAAGTTCA+CGG - chr3_4:59489787-59489806 Msa0510450:intron 35.0%
!!! TCTCAGTTTCTGTTTTTGGT+AGG - chr3_4:59489935-59489954 Msa0510450:CDS 35.0%
! ACGTTTTTATTGGAGTTGGA+TGG - chr3_4:59490165-59490184 Msa0510450:intron 35.0%
CTTAACTCTCAATACATGCA+CGG + chr3_4:59490209-59490228 None:intergenic 35.0%
GATTGTTCTCAAAGTAGAGT+AGG - chr3_4:59490447-59490466 Msa0510450:intron 35.0%
!! GCATTGGCTATATTTGATGT+TGG - chr3_4:59490571-59490590 Msa0510450:intron 35.0%
!! ATATTTGATGTTGGCCTTTG+AGG - chr3_4:59490580-59490599 Msa0510450:intron 35.0%
!!! ACTTTTTCAGAAGTATGGAG+TGG + chr3_4:59490628-59490647 None:intergenic 35.0%
TAAGCATTAGAATCAGGATC+TGG + chr3_4:59490746-59490765 None:intergenic 35.0%
ACGGAATAAGCATTAGAATC+AGG + chr3_4:59490752-59490771 None:intergenic 35.0%
! AGTAGCTTATCGGTTATTCT+TGG - chr3_4:59490876-59490895 Msa0510450:intron 35.0%
! GTAGCTTATCGGTTATTCTT+GGG - chr3_4:59490877-59490896 Msa0510450:intron 35.0%
TGAAGTTTCATGAACAGAGA+AGG - chr3_4:59490948-59490967 Msa0510450:CDS 35.0%
ACCACTTGAAAGACTTAAGC+TGG - chr3_4:59485374-59485393 Msa0510450:three_prime_UTR 40.0%
TCCAGCTTAAGTCTTTCAAG+TGG + chr3_4:59485378-59485397 None:intergenic 40.0%
ATATTGTTCGTGGTGAGAAG+AGG - chr3_4:59485400-59485419 Msa0510450:three_prime_UTR 40.0%
! CTCAAGGTTTGAGAGGTTTT+TGG - chr3_4:59485457-59485476 Msa0510450:three_prime_UTR 40.0%
!! AGGTTTGAGAGGTTTTTGGA+AGG - chr3_4:59485461-59485480 Msa0510450:three_prime_UTR 40.0%
!! GGTTTGAGAGGTTTTTGGAA+GGG - chr3_4:59485462-59485481 Msa0510450:three_prime_UTR 40.0%
!! GTTTGAGAGGTTTTTGGAAG+GGG - chr3_4:59485463-59485482 Msa0510450:three_prime_UTR 40.0%
CGGTTCGCAGAATATTTAGA+AGG + chr3_4:59485491-59485510 None:intergenic 40.0%
!! ATTAACAGCTTTGAACGGAG+CGG + chr3_4:59485511-59485530 None:intergenic 40.0%
ACAGTGAGTCCATGTGATTA+TGG - chr3_4:59486018-59486037 Msa0510450:intron 40.0%
CAGTGAGTCCATGTGATTAT+GGG - chr3_4:59486019-59486038 Msa0510450:intron 40.0%
AACATGGTCCCATAATCACA+TGG + chr3_4:59486030-59486049 None:intergenic 40.0%
! GCTGATTTCAGCTTCTAACA+TGG + chr3_4:59486046-59486065 None:intergenic 40.0%
TGTTAGAAGCTGAAATCAGC+AGG - chr3_4:59486046-59486065 Msa0510450:intron 40.0%
ATAGATTCGGACCAAGATAG+TGG - chr3_4:59486270-59486289 Msa0510450:intron 40.0%
GAAACTTTGGGTGGTGTAAT+TGG - chr3_4:59486304-59486323 Msa0510450:intron 40.0%
CCATAAAAGACTGCACTAGA+AGG + chr3_4:59486409-59486428 None:intergenic 40.0%
! CCTTCTAGTGCAGTCTTTTA+TGG - chr3_4:59486406-59486425 Msa0510450:intron 40.0%
GAATATGCATAAACATGGGC+AGG - chr3_4:59486489-59486508 Msa0510450:intron 40.0%
CAGTAAGGACATTGTTGCAT+GGG - chr3_4:59486545-59486564 Msa0510450:intron 40.0%
AGTAAGGACATTGTTGCATG+GGG - chr3_4:59486546-59486565 Msa0510450:intron 40.0%
TGCTACATACCCATTTGAAG+TGG - chr3_4:59486594-59486613 Msa0510450:intron 40.0%
GTCAAAATTGTGGAACAAGG+AGG - chr3_4:59486676-59486695 Msa0510450:intron 40.0%
!! TTTTACCATGTGCTGATCAC+AGG - chr3_4:59486980-59486999 Msa0510450:intron 40.0%
AAGATCGAAGTTTAGACCAG+AGG + chr3_4:59487207-59487226 None:intergenic 40.0%
! TGAGAGCGATTTTGCCTAAA+TGG + chr3_4:59487246-59487265 None:intergenic 40.0%
CAAAATCGCTCTCATGATCA+AGG - chr3_4:59487252-59487271 Msa0510450:intron 40.0%
! TCTTTTTCCTACGTAGGATC+AGG - chr3_4:59487284-59487303 Msa0510450:intron 40.0%
! CTTTTTCCTACGTAGGATCA+GGG - chr3_4:59487285-59487304 Msa0510450:intron 40.0%
TGTCACAAGATTGCAAATCG+CGG - chr3_4:59487311-59487330 Msa0510450:intron 40.0%
CAAATCGCGGAATTGTAACA+TGG - chr3_4:59487324-59487343 Msa0510450:intron 40.0%
!! CCATGGCTTTAGTTTGTTTG+TGG + chr3_4:59487501-59487520 None:intergenic 40.0%
CCACAAACAAACTAAAGCCA+TGG - chr3_4:59487498-59487517 Msa0510450:intron 40.0%
GCCATGGATATAAAACGTCA+AGG - chr3_4:59487514-59487533 Msa0510450:intron 40.0%
AGGGCAATTCAAACATGAGA+GGG - chr3_4:59487706-59487725 Msa0510450:intron 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr3_4:59487858-59487877 Msa0510450:intron 40.0%
GTACATCATCGTATTCAAGC+TGG - chr3_4:59487897-59487916 Msa0510450:intron 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr3_4:59488105-59488124 Msa0510450:intron 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr3_4:59488136-59488155 Msa0510450:intron 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr3_4:59488137-59488156 Msa0510450:intron 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr3_4:59488138-59488157 Msa0510450:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr3_4:59488268-59488287 Msa0510450:intron 40.0%
AGTGACATGAAAACTAGCTG+TGG - chr3_4:59488448-59488467 Msa0510450:intron 40.0%
TAAGCACACGAGACATGAAA+GGG + chr3_4:59488476-59488495 None:intergenic 40.0%
TTAAGCACACGAGACATGAA+AGG + chr3_4:59488477-59488496 None:intergenic 40.0%
!! CATTTTAAGGAACCAGGTTG+TGG - chr3_4:59488522-59488541 Msa0510450:intron 40.0%
TCGCAAGTCAAAGTGTAGAA+TGG + chr3_4:59488719-59488738 None:intergenic 40.0%
! GCTAGCCAAAATTTTCTGAG+GGG - chr3_4:59488854-59488873 Msa0510450:intron 40.0%
!! CTAGCCAAAATTTTCTGAGG+GGG - chr3_4:59488855-59488874 Msa0510450:intron 40.0%
AAAATTGTCAACGGTGTGCA+CGG + chr3_4:59489162-59489181 None:intergenic 40.0%
TAAAACCGGGCTTCTTTGAA+GGG + chr3_4:59489351-59489370 None:intergenic 40.0%
ATAAAACCGGGCTTCTTTGA+AGG + chr3_4:59489352-59489371 None:intergenic 40.0%
TAGGTTAGAGGTGAGTGTAA+GGG + chr3_4:59489410-59489429 None:intergenic 40.0%
TTAGGTTAGAGGTGAGTGTA+AGG + chr3_4:59489411-59489430 None:intergenic 40.0%
!!! GTGGATGGTTTTGATTGGTT+AGG + chr3_4:59489429-59489448 None:intergenic 40.0%
!!! TCAAGGTGGATGGTTTTGAT+TGG + chr3_4:59489434-59489453 None:intergenic 40.0%
AAATGACTATGGAGTACAGG+CGG + chr3_4:59489477-59489496 None:intergenic 40.0%
CTGAAATGACTATGGAGTAC+AGG + chr3_4:59489480-59489499 None:intergenic 40.0%
!!! TTTTGGGGCTGAAATGACTA+TGG + chr3_4:59489488-59489507 None:intergenic 40.0%
! TCATCTTCCCAGCGATTTTT+GGG + chr3_4:59489504-59489523 None:intergenic 40.0%
! TTCATCTTCCCAGCGATTTT+TGG + chr3_4:59489505-59489524 None:intergenic 40.0%
CAAGGATATTCAGTGGAAGT+TGG - chr3_4:59489545-59489564 Msa0510450:intron 40.0%
GATATTCAGTGGAAGTTGGA+GGG - chr3_4:59489549-59489568 Msa0510450:intron 40.0%
ATATTCAGTGGAAGTTGGAG+GGG - chr3_4:59489550-59489569 Msa0510450:intron 40.0%
TAGTCACAAATTGCAGAGAC+TGG - chr3_4:59489587-59489606 Msa0510450:intron 40.0%
TGAGATGGAATGTTTCACGA+TGG - chr3_4:59489613-59489632 Msa0510450:CDS 40.0%
AAAAAAGGGAGGTTCATGTC+CGG + chr3_4:59489679-59489698 None:intergenic 40.0%
! TACCGATTGTTTCCGTGTAA+AGG - chr3_4:59489757-59489776 Msa0510450:CDS 40.0%
CTCCTTTACACGGAAACAAT+CGG + chr3_4:59489762-59489781 None:intergenic 40.0%
AGGAGGATGATAGTTAGTGA+TGG - chr3_4:59489777-59489796 Msa0510450:CDS 40.0%
TATAGACGAGACTGTGAGAA+GGG + chr3_4:59489848-59489867 None:intergenic 40.0%
!! TTGGTAGGAGTATTGTGATG+AGG - chr3_4:59489950-59489969 Msa0510450:CDS 40.0%
! GGAAATGTTGGACTAGGATA+TGG - chr3_4:59490073-59490092 Msa0510450:intron 40.0%
CCAATAAAAACGTGTCCATG+TGG + chr3_4:59490158-59490177 None:intergenic 40.0%
! CCACATGGACACGTTTTTAT+TGG - chr3_4:59490155-59490174 Msa0510450:intron 40.0%
! GGACACGTTTTTATTGGAGT+TGG - chr3_4:59490161-59490180 Msa0510450:intron 40.0%
CGTGCATGTATTGAGAGTTA+AGG - chr3_4:59490207-59490226 Msa0510450:intron 40.0%
CTGAAAAAGTCATCACGGTA+TGG - chr3_4:59490638-59490657 Msa0510450:intron 40.0%
GCTTTACAGTCAATATACCC+AGG - chr3_4:59490697-59490716 Msa0510450:CDS 40.0%
GCAACTAAGTTTATGTGCCT+GGG + chr3_4:59490717-59490736 None:intergenic 40.0%
TGCAACTAAGTTTATGTGCC+TGG + chr3_4:59490718-59490737 None:intergenic 40.0%
! CTTCTTTTCCCATTTGCAGT+TGG - chr3_4:59490789-59490808 Msa0510450:CDS 40.0%
CAAGCAAGTTCCTTTGCTTT+AGG - chr3_4:59490840-59490859 Msa0510450:CDS 40.0%
!!! GGGCATTTTTTGCAACTAAC+TGG - chr3_4:59490897-59490916 Msa0510450:intron 40.0%
GCTACAACTCAAGGTTTGAG+AGG - chr3_4:59485450-59485469 Msa0510450:three_prime_UTR 45.0%
CACGTACAGTATCAAGTGGA+AGG + chr3_4:59485653-59485672 None:intergenic 45.0%
CTTCCACTTGATACTGTACG+TGG - chr3_4:59485651-59485670 Msa0510450:three_prime_UTR 45.0%
TCACCACGTACAGTATCAAG+TGG + chr3_4:59485657-59485676 None:intergenic 45.0%
! ATTCAGGTTCTGACACTGGT+TGG + chr3_4:59486161-59486180 None:intergenic 45.0%
! CATGATTCAGGTTCTGACAC+TGG + chr3_4:59486165-59486184 None:intergenic 45.0%
GGAGCCATGCTTATAAGTGA+TGG + chr3_4:59486388-59486407 None:intergenic 45.0%
TCTTATCTGCATTCACCCGA+AGG - chr3_4:59486451-59486470 Msa0510450:intron 45.0%
TGCCTTTGATCAGCTAGAGT+TGG - chr3_4:59486519-59486538 Msa0510450:intron 45.0%
GCCTTTGATCAGCTAGAGTT+GGG - chr3_4:59486520-59486539 Msa0510450:intron 45.0%
CCTTTGATCAGCTAGAGTTG+GGG - chr3_4:59486521-59486540 Msa0510450:intron 45.0%
CCATGCAACAATGTCCTTAC+TGG + chr3_4:59486547-59486566 None:intergenic 45.0%
CCAGTAAGGACATTGTTGCA+TGG - chr3_4:59486544-59486563 Msa0510450:intron 45.0%
! CATACCCATTTGAAGTGGTG+AGG - chr3_4:59486599-59486618 Msa0510450:intron 45.0%
GGGAATAAGTCCTGCATAGA+GGG + chr3_4:59486710-59486729 None:intergenic 45.0%
TGGGAATAAGTCCTGCATAG+AGG + chr3_4:59486711-59486730 None:intergenic 45.0%
!! GATCACAGGCTAGCTCTATA+TGG - chr3_4:59486994-59487013 Msa0510450:intron 45.0%
GCTTTATGATTGCCTTCCTC+TGG - chr3_4:59487188-59487207 Msa0510450:intron 45.0%
TCGAAGTTTAGACCAGAGGA+AGG + chr3_4:59487203-59487222 None:intergenic 45.0%
GCTCTCATGATCAAGGTAGT+CGG - chr3_4:59487259-59487278 Msa0510450:intron 45.0%
! TCGGAGTCTTTTTCCTACGT+AGG - chr3_4:59487278-59487297 Msa0510450:intron 45.0%
GGAAAGGGTCACACATCAAA+CGG - chr3_4:59487574-59487593 Msa0510450:intron 45.0%
GAAAGGGTCACACATCAAAC+GGG - chr3_4:59487575-59487594 Msa0510450:intron 45.0%
TCTATGCATGCCTGATGCAA+AGG - chr3_4:59487615-59487634 Msa0510450:intron 45.0%
CTATGCATGCCTGATGCAAA+GGG - chr3_4:59487616-59487635 Msa0510450:intron 45.0%
CAGGGCAATTCAAACATGAG+AGG - chr3_4:59487705-59487724 Msa0510450:intron 45.0%
! ATGAGAGGGAGTACGACAAA+TGG - chr3_4:59487720-59487739 Msa0510450:intron 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr3_4:59487901-59487920 Msa0510450:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr3_4:59487910-59487929 Msa0510450:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr3_4:59487924-59487943 Msa0510450:intron 45.0%
CTTATCGCACAAAACACCTG+AGG + chr3_4:59487943-59487962 None:intergenic 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr3_4:59488010-59488029 Msa0510450:intron 45.0%
TCCGTACCATACAACATTGC+CGG + chr3_4:59488014-59488033 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr3_4:59488018-59488037 Msa0510450:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr3_4:59488019-59488038 Msa0510450:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr3_4:59488055-59488074 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr3_4:59488058-59488077 Msa0510450:intron 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr3_4:59488252-59488271 Msa0510450:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr3_4:59488262-59488281 Msa0510450:intron 45.0%
AACGCCTTATCCCACTAAGT+GGG + chr3_4:59488409-59488428 None:intergenic 45.0%
CAGAGCAGTTATCCACAGAT+CGG + chr3_4:59488550-59488569 None:intergenic 45.0%
CGATTTGACTACCACGATTG+CGG - chr3_4:59488736-59488755 Msa0510450:intron 45.0%
TACTTAAAGGACCGCAATCG+TGG + chr3_4:59488750-59488769 None:intergenic 45.0%
AATAACATGCACACCGTCAG+CGG - chr3_4:59488827-59488846 Msa0510450:intron 45.0%
! TTGGCCCCCTCAGAAAATTT+TGG + chr3_4:59488862-59488881 None:intergenic 45.0%
AAATTGTCAACGGTGTGCAC+GGG + chr3_4:59489161-59489180 None:intergenic 45.0%
TATTCCCCTTCAAAGAAGCC+CGG - chr3_4:59489343-59489362 Msa0510450:intron 45.0%
! AAAACCGGGCTTCTTTGAAG+GGG + chr3_4:59489350-59489369 None:intergenic 45.0%
TATGGAGTACAGGCGGATAA+TGG + chr3_4:59489470-59489489 None:intergenic 45.0%
ATTTCAGCCCCAAAAATCGC+TGG - chr3_4:59489493-59489512 Msa0510450:intron 45.0%
TTTCAGCCCCAAAAATCGCT+GGG - chr3_4:59489494-59489513 Msa0510450:intron 45.0%
! CATCTTCCCAGCGATTTTTG+GGG + chr3_4:59489503-59489522 None:intergenic 45.0%
GGATATTCAGTGGAAGTTGG+AGG - chr3_4:59489548-59489567 Msa0510450:intron 45.0%
TATTCAGTGGAAGTTGGAGG+GGG - chr3_4:59489551-59489570 Msa0510450:intron 45.0%
TCACAAATTGCAGAGACTGG+TGG - chr3_4:59489590-59489609 Msa0510450:intron 45.0%
GATGGAATGTTTCACGATGG+TGG - chr3_4:59489616-59489635 Msa0510450:CDS 45.0%
! AATGTTTCACGATGGTGGCA+GGG - chr3_4:59489621-59489640 Msa0510450:CDS 45.0%
CGATTGTTTCCGTGTAAAGG+AGG - chr3_4:59489760-59489779 Msa0510450:CDS 45.0%
GGAAGTTCACGGTACATAGA+TGG - chr3_4:59489798-59489817 Msa0510450:intron 45.0%
AGTTCACGGTACATAGATGG+TGG - chr3_4:59489801-59489820 Msa0510450:intron 45.0%
GTTCACGGTACATAGATGGT+GGG - chr3_4:59489802-59489821 Msa0510450:intron 45.0%
!! GTACATAGATGGTGGGCTAT+GGG - chr3_4:59489809-59489828 Msa0510450:intron 45.0%
GTATAGACGAGACTGTGAGA+AGG + chr3_4:59489849-59489868 None:intergenic 45.0%
GTTTGAGAGAGAGAGAGAAG+AGG + chr3_4:59489902-59489921 None:intergenic 45.0%
! GAGTATTGTGATGAGGAGTC+AGG - chr3_4:59489957-59489976 Msa0510450:CDS 45.0%
! TTGCTTCTTTTCCCATCGCT+GGG + chr3_4:59490021-59490040 None:intergenic 45.0%
! TTTGCTTCTTTTCCCATCGC+TGG + chr3_4:59490022-59490041 None:intergenic 45.0%
! GTTGGACTAGGATATGGTGT+AGG - chr3_4:59490079-59490098 Msa0510450:intron 45.0%
! CTCTACCAGCAGAAAGCTTT+TGG - chr3_4:59490670-59490689 Msa0510450:intron 45.0%
! AGCAAAGGAACTTGCTTGCT+TGG + chr3_4:59490838-59490857 None:intergenic 45.0%
!! TAGTTTAATAAAAAAATAAT+AGG - chr3_4:59485971-59485990 Msa0510450:intron 5.0%
!!! TTTTATTTTTTCTATATATT+TGG + chr3_4:59488881-59488900 None:intergenic 5.0%
!! TTTATTGCTGGTGCTGCTGC+TGG - chr3_4:59485606-59485625 Msa0510450:three_prime_UTR 50.0%
CCCCAACTCTAGCTGATCAA+AGG + chr3_4:59486524-59486543 None:intergenic 50.0%
TTGTTGCATGGGGCTATTGC+TGG - chr3_4:59486556-59486575 Msa0510450:intron 50.0%
! ACCCATTTGAAGTGGTGAGG+AGG - chr3_4:59486602-59486621 Msa0510450:intron 50.0%
GCCTCCTCACCACTTCAAAT+GGG + chr3_4:59486606-59486625 None:intergenic 50.0%
TGCCTCCTCACCACTTCAAA+TGG + chr3_4:59486607-59486626 None:intergenic 50.0%
TTTCCTACGTAGGATCAGGG+AGG - chr3_4:59487288-59487307 Msa0510450:intron 50.0%
AGAGCAGTGCAGAGAACAGA+GGG - chr3_4:59487553-59487572 Msa0510450:intron 50.0%
AGTGCAGAGAACAGAGGGAA+AGG - chr3_4:59487558-59487577 Msa0510450:intron 50.0%
GTGCAGAGAACAGAGGGAAA+GGG - chr3_4:59487559-59487578 Msa0510450:intron 50.0%
GGCATGCATAGACTCACACA+AGG + chr3_4:59487607-59487626 None:intergenic 50.0%
AAAGGGTCGTGCATGCATGA+TGG - chr3_4:59487633-59487652 Msa0510450:intron 50.0%
AAGGGTCGTGCATGCATGAT+GGG - chr3_4:59487634-59487653 Msa0510450:intron 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr3_4:59488005-59488024 Msa0510450:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr3_4:59488066-59488085 Msa0510450:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr3_4:59488086-59488105 Msa0510450:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr3_4:59488230-59488249 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr3_4:59488404-59488423 None:intergenic 50.0%
ACGCCTTATCCCACTAAGTG+GGG + chr3_4:59488408-59488427 None:intergenic 50.0%
CAACGCCTTATCCCACTAAG+TGG + chr3_4:59488410-59488429 None:intergenic 50.0%
!! GCATGATTCCACCGGTTCTA+CGG - chr3_4:59488597-59488616 Msa0510450:intron 50.0%
GTAAATTGGTAGGAGCGGCT+GGG + chr3_4:59488636-59488655 None:intergenic 50.0%
TGTAAATTGGTAGGAGCGGC+TGG + chr3_4:59488637-59488656 None:intergenic 50.0%
AAACACAGCGAGACCTAGCA+TGG - chr3_4:59488680-59488699 Msa0510450:intron 50.0%
GGTGAGTGTAAGGGTGGAAA+TGG + chr3_4:59489401-59489420 None:intergenic 50.0%
GTTAGAGGTGAGTGTAAGGG+TGG + chr3_4:59489407-59489426 None:intergenic 50.0%
! GAATGTTTCACGATGGTGGC+AGG - chr3_4:59489620-59489639 Msa0510450:CDS 50.0%
!! GGTACATAGATGGTGGGCTA+TGG - chr3_4:59489808-59489827 Msa0510450:intron 50.0%
TGATGAGGAGTCAGGTCTGT+TGG - chr3_4:59489965-59489984 Msa0510450:CDS 50.0%
TCAGCATCGTAACGTCCACA+TGG - chr3_4:59490140-59490159 Msa0510450:intron 50.0%
CCAGTCCAAAAGCTTTCTGC+TGG + chr3_4:59490678-59490697 None:intergenic 50.0%
! CCAGCAGAAAGCTTTTGGAC+TGG - chr3_4:59490675-59490694 Msa0510450:CDS 50.0%
! CAGGTTCTGACACTGGTTGG+AGG + chr3_4:59486158-59486177 None:intergenic 55.0%
! ACCAAGATAGTGGCACCTGG+CGG - chr3_4:59486280-59486299 Msa0510450:intron 55.0%
GCACCTGGCGGAGAAACTTT+GGG - chr3_4:59486292-59486311 Msa0510450:intron 55.0%
AGCTAGAGTTGGGGCCAGTA+AGG - chr3_4:59486530-59486549 Msa0510450:intron 55.0%
GGCATTTCAGCCCTCTATGC+AGG - chr3_4:59486697-59486716 Msa0510450:intron 55.0%
! GCTAGCCTGTGATCAGCACA+TGG + chr3_4:59486988-59487007 None:intergenic 55.0%
ACACCTCCCTGATCCTACGT+AGG + chr3_4:59487294-59487313 None:intergenic 55.0%
CAGAGCAGTGCAGAGAACAG+AGG - chr3_4:59487552-59487571 Msa0510450:intron 55.0%
CATGCACGACCCTTTGCATC+AGG + chr3_4:59487628-59487647 None:intergenic 55.0%
! GTCGTGCATGCATGATGGGA+AGG - chr3_4:59487638-59487657 Msa0510450:intron 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr3_4:59487992-59488011 Msa0510450:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr3_4:59488022-59488041 Msa0510450:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr3_4:59488078-59488097 Msa0510450:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr3_4:59488229-59488248 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3_4:59488396-59488415 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3_4:59488395-59488414 Msa0510450:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3_4:59488396-59488415 Msa0510450:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr3_4:59488402-59488421 Msa0510450:intron 55.0%
CACAGATCGGATCCACAACC+TGG + chr3_4:59488537-59488556 None:intergenic 55.0%
CAGGTTGTGGATCCGATCTG+TGG - chr3_4:59488535-59488554 Msa0510450:intron 55.0%
GTCATGGTGAGCCGTAGAAC+CGG + chr3_4:59488611-59488630 None:intergenic 55.0%
TGCGACTTTGCGACCATGCT+AGG + chr3_4:59488696-59488715 None:intergenic 55.0%
TGGAAGTTGGAGGGGGTTGT+TGG - chr3_4:59489558-59489577 Msa0510450:intron 55.0%
! TGCAGAGACTGGTGGTGAGA+TGG - chr3_4:59489598-59489617 Msa0510450:CDS 55.0%
CATCGCTGGGAAGCAAAGAG+GGG + chr3_4:59490008-59490027 None:intergenic 55.0%
CCATCGCTGGGAAGCAAAGA+GGG + chr3_4:59490009-59490028 None:intergenic 55.0%
CCTCTTTGCTTCCCAGCGAT+GGG - chr3_4:59490007-59490026 Msa0510450:CDS 55.0%
! CGGACCAAGATAGTGGCACC+TGG - chr3_4:59486277-59486296 Msa0510450:intron 60.0%
!! TCCGCCAGGTGCCACTATCT+TGG + chr3_4:59486284-59486303 None:intergenic 60.0%
GGCACCTGGCGGAGAAACTT+TGG - chr3_4:59486291-59486310 Msa0510450:intron 60.0%
CCACCCAAAGTTTCTCCGCC+AGG + chr3_4:59486298-59486317 None:intergenic 60.0%
CCTGGCGGAGAAACTTTGGG+TGG - chr3_4:59486295-59486314 Msa0510450:intron 60.0%
ATGGTGAGCCGTAGAACCGG+TGG + chr3_4:59488608-59488627 None:intergenic 60.0%
TAGGAGCGGCTGGGTTGTCA+TGG + chr3_4:59488627-59488646 None:intergenic 60.0%
!! TTGGCTAGCTTCGCCGCTGA+CGG + chr3_4:59488843-59488862 None:intergenic 60.0%
! CACGATGGTGGCAGGGAGTT+TGG - chr3_4:59489628-59489647 Msa0510450:CDS 60.0%
TGGCAGGGAGTTTGGACCCA+CGG - chr3_4:59489636-59489655 Msa0510450:CDS 60.0%
GAGTTTGGACCCACGGGACA+CGG - chr3_4:59489643-59489662 Msa0510450:CDS 60.0%
AGTTTGGACCCACGGGACAC+GGG - chr3_4:59489644-59489663 Msa0510450:CDS 60.0%
GGGAGGTTCATGTCCGGCAT+TGG + chr3_4:59489673-59489692 None:intergenic 60.0%
CCCTCTTTGCTTCCCAGCGA+TGG - chr3_4:59490006-59490025 Msa0510450:CDS 60.0%
CCCATCGCTGGGAAGCAAAG+AGG + chr3_4:59490010-59490029 None:intergenic 60.0%
GCAGCACGCAGCAGCAGTGA+CGG - chr3_4:59487660-59487679 Msa0510450:intron 65.0%
GAGAAGACCCGTAGACGCCG+TGG - chr3_4:59488219-59488238 Msa0510450:intron 65.0%
GGAATCATGCGCGCTCGCTG+AGG + chr3_4:59488587-59488606 None:intergenic 65.0%
GCGAGCGCGCATGATTCCAC+CGG - chr3_4:59488589-59488608 Msa0510450:intron 65.0%
GGCAGGGAGTTTGGACCCAC+GGG - chr3_4:59489637-59489656 Msa0510450:CDS 65.0%
GTTTGGACCCACGGGACACG+GGG - chr3_4:59489645-59489664 Msa0510450:CDS 65.0%
ATTGGAGCCCCGTGTCCCGT+GGG + chr3_4:59489655-59489674 None:intergenic 65.0%
CATTGGAGCCCCGTGTCCCG+TGG + chr3_4:59489656-59489675 None:intergenic 70.0%
GGGACACGGGGCTCCAATGC+CGG - chr3_4:59489657-59489676 Msa0510450:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 59485363 59490974 59485363 ID=Msa0510450;Name=Msa0510450
chr3_4 mRNA 59485363 59490974 59485363 ID=Msa0510450-mRNA-1;Parent=Msa0510450;Name=Msa0510450-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0.2|1|0.25|0.2|5|506|256
chr3_4 exon 59485363 59485937 59485363 ID=Msa0510450-mRNA-1:exon:14027;Parent=Msa0510450-mRNA-1
chr3_4 exon 59489596 59489801 59489596 ID=Msa0510450-mRNA-1:exon:14026;Parent=Msa0510450-mRNA-1
chr3_4 exon 59489820 59490063 59489820 ID=Msa0510450-mRNA-1:exon:14025;Parent=Msa0510450-mRNA-1
chr3_4 exon 59490672 59490874 59490672 ID=Msa0510450-mRNA-1:exon:14024;Parent=Msa0510450-mRNA-1
chr3_4 exon 59490926 59490974 59490926 ID=Msa0510450-mRNA-1:exon:14023;Parent=Msa0510450-mRNA-1
chr3_4 CDS 59490926 59490974 59490926 ID=Msa0510450-mRNA-1:cds;Parent=Msa0510450-mRNA-1
chr3_4 CDS 59490672 59490874 59490672 ID=Msa0510450-mRNA-1:cds;Parent=Msa0510450-mRNA-1
chr3_4 CDS 59489820 59490063 59489820 ID=Msa0510450-mRNA-1:cds;Parent=Msa0510450-mRNA-1
chr3_4 CDS 59489596 59489801 59489596 ID=Msa0510450-mRNA-1:cds;Parent=Msa0510450-mRNA-1
chr3_4 CDS 59485869 59485937 59485869 ID=Msa0510450-mRNA-1:cds;Parent=Msa0510450-mRNA-1
chr3_4 three_prime_UTR 59485363 59485868 59485363 ID=Msa0510450-mRNA-1:three_prime_utr;Parent=Msa0510450-mRNA-1
Gene Sequence

>Msa0510450

ACTTGTGTTGCACCACTTGAAAGACTTAAGCTGGAATATATTGTTCGTGGTTTGAGAGGTTTTTGGAAGGGGAACCTTCTAAATATTCTGCGAACCGCTCCGTTCAAAGCTGTTAATTTTAGTGCTTACGACACATATAGAAAACAACTACTTAGATTCTCTGGAAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGAGTTACTGCTACTATTATTTGCCTTCCACTTGATACTATTCGGACCAAGATAGTGGCACCTGGCGGAGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAATACATGATTCAAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCATCACTTATAAGCATGGCTCCTTCTAGTGCAGTCTTTTATGGCGTATACGATATGCTAAAATCATCTTATCTGCATTCACCCGAAGGAAAGCAAAGAATCAAGAATATGCATAAACATGGGCAGGAACTGAAGTTGGGGCCAGTAAGGACATTGTTGCATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTGAGGAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCAACTTTTGTCAAAATTGTGGAACAAGGAGGCATTTCAGCCCTCTATGCAGGACTTATTCCCAGCTTATTACAGGTACTTCCTTCAGCATCAATTAGTTACTTTGTGTATGAGTTTATGAAGATTGTTCTCAAAGTAGAGTAG
Protein sequence

>Msa0510450

TCVAPLERLKLEYIVRGLRGFWKGNLLNILRTAPFKAVNFSAYDTYRKQLLRFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAPGGETLGGVIGAFQYMIQTEGIFSLYKGLVPSLISMAPSSAVFYGVYDMLKSSYLHSPEGKQRIKNMHKHGQELKLGPVRTLLHGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLATFVKIVEQGGISALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVE*