AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42678


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42678.t1 MTR_3g105050 97.661 171 4 0 378 548 60 230 9.52e-113 335
MS.gene42678.t1 MTR_2g039140 41.304 184 75 3 1 183 120 271 1.09e-32 127
MS.gene42678.t1 MTR_4g036430 89.744 39 4 0 1 39 31 69 2.87e-19 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42678.t1 AT2G26340 61.677 167 61 2 385 548 87 253 4.68e-58 194
MS.gene42678.t1 AT2G26340 59.880 167 61 3 385 548 87 250 1.06e-53 183
MS.gene42678.t1 AT3G29785 58.889 90 36 1 11 100 7 95 7.01e-31 116

Find 134 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATACCAACTGAACTTAAT+TGG 0.091541 3.3:+86408597 None:intergenic
CTGAGAACTACGATGATTTC+TGG 0.189947 3.3:+86408313 None:intergenic
ATCTCATCTGTGGGACTTCC+TGG 0.243179 3.3:+86406811 None:intergenic
TCATCATCCTTCATCGATTC+TGG 0.247368 3.3:+86408857 None:intergenic
CTAGAAGACCTTCTTAATTC+AGG 0.247761 3.3:+86406715 None:intergenic
TTCGCCTCTTGATTCTTTGC+TGG 0.253882 3.3:+86408224 None:intergenic
GAGATCGGCAGAGGGAAAAT+TGG 0.292643 3.3:+86399590 None:intergenic
ACAGTTCCAGATCAAGGATT+TGG 0.307790 3.3:-86400017 MS.gene42678:CDS
AAAGCATTCAAGTTTACTAT+TGG 0.312591 3.3:-86404412 MS.gene42678:CDS
ACTACGATGATTTCTGGATT+TGG 0.314338 3.3:+86408319 None:intergenic
TTCTGCCAATTCCTCTGATT+GGG 0.327914 3.3:+86406786 None:intergenic
AACTACATGTTGTTAATTGA+TGG 0.335643 3.3:-86406664 MS.gene42678:CDS
ATTTCTGGATTTGGATTGTC+TGG 0.336440 3.3:+86408328 None:intergenic
ATTCTGCCAATTCCTCTGAT+TGG 0.336830 3.3:+86406785 None:intergenic
TCTCCGTTTCCATGTCTTCC+CGG 0.345652 3.3:+86398161 None:intergenic
AATACCAACTGAACTTAATT+GGG 0.364604 3.3:+86408598 None:intergenic
ATCACCTGTCCAGAGCAATA+AGG 0.367512 3.3:+86398737 None:intergenic
TGCCGATCTCTACTTCGCTC+TGG 0.368041 3.3:-86399577 MS.gene42678:CDS
AGATCGGCAGAGGGAAAATT+GGG 0.369482 3.3:+86399591 None:intergenic
TCGCCTCTTGATTCTTTGCT+GGG 0.374564 3.3:+86408225 None:intergenic
ATGGTGCGGACTTTGGCTTT+TGG 0.377376 3.3:-86408943 MS.gene42678:CDS
CATGCTTCATCATAATCTTC+AGG 0.392057 3.3:+86406634 None:intergenic
GTAGAGATGGATGATGTTCC+AGG 0.394130 3.3:-86406829 MS.gene42678:CDS
TACTGCTGAAGGAAGCATTA+TGG 0.402890 3.3:-86401383 MS.gene42678:CDS
GATTCCCCAATCAGAGGAAT+TGG 0.403290 3.3:-86406791 MS.gene42678:CDS
GACCTTCTTAATTCAGGAAC+TGG 0.408428 3.3:+86406721 None:intergenic
ACAGTAGCACTCCAACTATC+TGG 0.413891 3.3:+86408530 None:intergenic
TCATCCATCTCTACATAAAC+AGG 0.414467 3.3:+86406838 None:intergenic
AGAAATTCAACCAGAGGAAA+TGG 0.417568 3.3:-86408368 MS.gene42678:CDS
CAGTTCCAGATCAAGGATTT+GGG 0.422160 3.3:-86400016 MS.gene42678:intron
TCACCTGTCCAGAGCAATAA+GGG 0.422481 3.3:+86398738 None:intergenic
TGTCTTCCCTACCAGATAGT+TGG 0.424640 3.3:-86408541 MS.gene42678:CDS
CAGTTCTGCCCTTATTGCTC+TGG 0.425958 3.3:-86398746 MS.gene42678:CDS
TAGTTTATGTATCTGCTGTT+TGG 0.431465 3.3:+86406682 None:intergenic
ATTGATTTAACGGAGGCATC+AGG 0.434244 3.3:+86398781 None:intergenic
GAGATCCGACGGAGAGAGTT+GGG 0.442215 3.3:-86408434 MS.gene42678:CDS
AGACATGGAAACGGAGAACT+TGG 0.443335 3.3:-86398155 MS.gene42678:CDS
GCAAATGTTGCTTCCACCTC+AGG 0.445655 3.3:-86408194 MS.gene42678:CDS
GCATTCAAGTTTACTATTGG+AGG 0.446523 3.3:-86404409 MS.gene42678:CDS
ACCATCAGACGTGTTAAGTA+AGG 0.446609 3.3:-86398212 MS.gene42678:CDS
AAGTTCGATGGTGCGGACTT+TGG 0.452497 3.3:-86408950 MS.gene42678:CDS
GCCGATCTCTACTTCGCTCT+GGG 0.469537 3.3:-86399576 MS.gene42678:CDS
TGAACTTTATTTGATGCTGA+AGG 0.474628 3.3:+86408704 None:intergenic
TAGCTGATTCATACTTGGAC+CGG 0.479874 3.3:-86398180 MS.gene42678:CDS
GGTTATAGCTGATTCATACT+TGG 0.482554 3.3:-86398185 MS.gene42678:CDS
ATTTGATGATGTTCGTGATC+TGG 0.482957 3.3:-86408468 MS.gene42678:CDS
CTGCCCTTATTGCTCTGGAC+AGG 0.483084 3.3:-86398741 MS.gene42678:intron
CATTACCCAAATCCTTGATC+TGG 0.483632 3.3:+86400011 None:intergenic
TTTACCACGTCCATTTCCTC+TGG 0.487326 3.3:+86408358 None:intergenic
ATTCTGTTTCTGAAGGTCAC+TGG 0.496213 3.3:-86398845 MS.gene42678:intron
CTTAATTCAGGAACTGGAGT+AGG 0.496648 3.3:+86406727 None:intergenic
GAAACGGAGAACTTGGACCC+TGG 0.503257 3.3:-86398148 MS.gene42678:CDS
TTATGGACAAATATGTTAAG+AGG 0.506114 3.3:-86401366 MS.gene42678:intron
CCCTTACTTAACACGTCTGA+TGG 0.507207 3.3:+86398211 None:intergenic
TCTATCGAGTGTTGGAATTG+TGG 0.512167 3.3:-86408281 MS.gene42678:CDS
TGGTTTCAGCCTCTTACAAA+CGG 0.513105 3.3:-86398236 MS.gene42678:intron
CGCGTCACCTCCTCCTGAGG+TGG 0.515832 3.3:+86408181 None:intergenic
CACGCAGAAGCAAGGAATCA+AGG 0.516697 3.3:+86398818 None:intergenic
CTGATGGTACCGTTTGTAAG+AGG 0.521003 3.3:+86398227 None:intergenic
AGCGAAGTAGAGATCGGCAG+AGG 0.521610 3.3:+86399581 None:intergenic
CCTCACACAGTTCCAGATCA+AGG 0.524145 3.3:-86400023 MS.gene42678:CDS
TCTGGTTTCTTTCCTGTGAG+AGG 0.524616 3.3:+86408875 None:intergenic
CACAGCTGTGAGTAGCTCCT+CGG 0.527844 3.3:-86408507 MS.gene42678:CDS
GATTCTAATTGCTTTAAACC+AGG 0.530046 3.3:+86398130 None:intergenic
CTCCAGTTCCTGAATTAAGA+AGG 0.530952 3.3:-86406723 MS.gene42678:CDS
ACAGCTGTGAGTAGCTCCTC+GGG 0.532462 3.3:-86408506 MS.gene42678:CDS
AAAGAAACCAGAATCGATGA+AGG 0.539324 3.3:-86408864 MS.gene42678:CDS
TGTTGGAATTGTGGAAAGAC+GGG 0.540082 3.3:-86408272 MS.gene42678:CDS
GATTGGGGAATCTCATCTGT+GGG 0.541163 3.3:+86406802 None:intergenic
TGATTGGGGAATCTCATCTG+TGG 0.543207 3.3:+86406801 None:intergenic
AGAGATCCGACGGAGAGAGT+TGG 0.549236 3.3:-86408435 MS.gene42678:CDS
CAAATAAAGTTCATTTGATG+AGG 0.550433 3.3:-86408694 MS.gene42678:CDS
GGAACTGGAGTAGGATGCAC+TGG 0.552002 3.3:+86406736 None:intergenic
TATGCTTCTGACAGTGGCAA+TGG 0.552161 3.3:-86399006 MS.gene42678:CDS
ATTCTAATTGCTTTAAACCA+GGG 0.552324 3.3:+86398131 None:intergenic
AACCACCGCTGGTCTTATGA+AGG 0.557775 3.3:-86408750 MS.gene42678:CDS
TAGCACTCCAACTATCTGGT+AGG 0.558134 3.3:+86408534 None:intergenic
ACTCGAAATCTATCGAGTGT+TGG 0.561027 3.3:-86408289 MS.gene42678:CDS
GTGAAAATTGAAAAGTTCGA+TGG 0.563926 3.3:-86408962 MS.gene42678:CDS
TGCCTCCGTTAAATCAATGA+AGG 0.566338 3.3:-86398776 MS.gene42678:CDS
GTGTTGGAATTGTGGAAAGA+CGG 0.567490 3.3:-86408273 MS.gene42678:CDS
CTCTGTATGCAATACTGAAG+AGG 0.567853 3.3:+86408400 None:intergenic
ACAACCCAATTAAGTTCAGT+TGG 0.568124 3.3:-86408602 MS.gene42678:CDS
GTTGCTTCCACCTCAGGAGG+AGG 0.568689 3.3:-86408188 MS.gene42678:intron
TCTTGAAGCACGCAGAAGCA+AGG 0.570877 3.3:+86398810 None:intergenic
TCTGCCAATTCCTCTGATTG+GGG 0.571085 3.3:+86406787 None:intergenic
GGACCGGGAAGACATGGAAA+CGG 0.574097 3.3:-86398164 MS.gene42678:CDS
TTTACACTTCGGATGACAGA+AGG 0.576141 3.3:-86408665 MS.gene42678:CDS
GCCCAGAGCGAAGTAGAGAT+CGG 0.581943 3.3:+86399575 None:intergenic
ATACTTGGACCGGGAAGACA+TGG 0.582312 3.3:-86398170 MS.gene42678:CDS
AGCTGATTCATACTTGGACC+GGG 0.583181 3.3:-86398179 MS.gene42678:CDS
AGACGTGTTAAGTAAGGGAA+AGG 0.583469 3.3:-86398206 MS.gene42678:CDS
TGAGGCAGTTGTTTACACTT+CGG 0.585632 3.3:-86408676 MS.gene42678:CDS
GTTACAGGTGCTACTGCTGA+AGG 0.587152 3.3:-86401394 MS.gene42678:intron
CTCCCACTTACTAGCATCCG+TGG 0.588137 3.3:+86406606 None:intergenic
AAGCTACATCAACCTCTCAC+AGG 0.592140 3.3:-86408887 MS.gene42678:CDS
GATGACAGAAGGCGCATCAG+TGG 0.593273 3.3:-86408654 MS.gene42678:CDS
AAATGGACGTGGTAAATCAA+AGG 0.596335 3.3:-86408351 MS.gene42678:CDS
CCTTGATCTGGAACTGTGTG+AGG 0.597626 3.3:+86400023 None:intergenic
AGCACTCCAACTATCTGGTA+GGG 0.597976 3.3:+86408535 None:intergenic
CCATCAGACGTGTTAAGTAA+GGG 0.598697 3.3:-86398211 MS.gene42678:CDS
TACATGTTGTTAATTGATGG+AGG 0.599569 3.3:-86406661 MS.gene42678:CDS
CTTCTCGATAGACAAGCACT+TGG 0.601850 3.3:-86408827 MS.gene42678:CDS
CGAGCCTGTTTATGTAGAGA+TGG 0.602356 3.3:-86406842 MS.gene42678:CDS
AATGTTGCTTCCACCTCAGG+AGG 0.603928 3.3:-86408191 MS.gene42678:CDS
GCGAAGTAGAGATCGGCAGA+GGG 0.604621 3.3:+86399582 None:intergenic
AATCGATGAAGGATGATGAG+TGG 0.606445 3.3:-86408853 MS.gene42678:CDS
AATTGAAAAGTTCGATGGTG+CGG 0.608192 3.3:-86408957 MS.gene42678:CDS
TGGTATTGAATTTGACGATG+AGG 0.610535 3.3:-86408582 MS.gene42678:CDS
CAAGTGCTTGTCTATCGAGA+AGG 0.612004 3.3:+86408828 None:intergenic
TATGGCTGCAGACGAAGGAA+AGG 0.614378 3.3:-86408984 MS.gene42678:CDS
GGAGTTATGGCTGCAGACGA+AGG 0.617375 3.3:-86408989 None:intergenic
ATTCACCCAACTCTCTCCGT+CGG 0.618585 3.3:+86408429 None:intergenic
AGCCTTCATAAGACCAGCGG+TGG 0.620835 3.3:+86408748 None:intergenic
GAATCAAGAGGCGAAAGATG+AGG 0.623736 3.3:-86408216 MS.gene42678:CDS
GCAAAAGAGAAAACCACCGC+TGG 0.626545 3.3:-86408761 MS.gene42678:CDS
TTTACACGAAGAGATGCTGC+AGG 0.626649 3.3:+86399553 None:intergenic
AGATGAGATTCCCCAATCAG+AGG 0.627217 3.3:-86406797 MS.gene42678:CDS
TACTCAGTGAAGAGATCCGA+CGG 0.629113 3.3:-86408445 MS.gene42678:CDS
CAACGCGTCACCTCCTCCTG+AGG 0.630580 3.3:+86408178 None:intergenic
TGCCTTCATTGATTTAACGG+AGG 0.631585 3.3:+86398774 None:intergenic
AACTGTGTGAGGATTACAGC+TGG 0.642570 3.3:+86400034 None:intergenic
AGAGGAAGAAATTCAACCAG+AGG 0.643795 3.3:-86408374 MS.gene42678:CDS
GCGCAATATGCTTCTGACAG+TGG 0.644065 3.3:-86399012 MS.gene42678:CDS
CTGTTTCTGAAGGTCACTGG+AGG 0.644931 3.3:-86398842 MS.gene42678:intron
TCAACCAGAGGAAATGGACG+TGG 0.665050 3.3:-86408362 MS.gene42678:CDS
GCTCCCAGCAAAGAATCAAG+AGG 0.671318 3.3:-86408228 MS.gene42678:CDS
GGATGCACTGGTGTGTCAGA+CGG 0.673844 3.3:+86406748 None:intergenic
GTATTGCATACAGAGTCAAG+AGG 0.682691 3.3:-86408392 MS.gene42678:CDS
GCTGGTACGTAAGTCTCCAG+AGG 0.686740 3.3:+86400052 None:intergenic
TGATGAAGCATGTCAGACCA+CGG 0.691661 3.3:-86406623 MS.gene42678:CDS
AAGAGCCTTCATAAGACCAG+CGG 0.707222 3.3:+86408745 None:intergenic
ACAATGTTGATGATTGTCTG+AGG 0.713768 3.3:-86398969 MS.gene42678:intron
GATCGGCAGAGGGAAAATTG+GGG 0.716033 3.3:+86399592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr3.3 gene 86398120 86409005 86398120 ID=MS.gene42678
chr3.3 mRNA 86398120 86409005 86398120 ID=MS.gene42678.t1;Parent=MS.gene42678
chr3.3 exon 86408189 86409005 86408189 ID=MS.gene42678.t1.exon1;Parent=MS.gene42678.t1
chr3.3 CDS 86408189 86409005 86408189 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86406617 86406871 86406617 ID=MS.gene42678.t1.exon2;Parent=MS.gene42678.t1
chr3.3 CDS 86406617 86406871 86406617 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86404380 86404436 86404380 ID=MS.gene42678.t1.exon3;Parent=MS.gene42678.t1
chr3.3 CDS 86404380 86404436 86404380 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86401367 86401409 86401367 ID=MS.gene42678.t1.exon4;Parent=MS.gene42678.t1
chr3.3 CDS 86401367 86401409 86401367 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86400017 86400087 86400017 ID=MS.gene42678.t1.exon5;Parent=MS.gene42678.t1
chr3.3 CDS 86400017 86400087 86400017 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86399543 86399637 86399543 ID=MS.gene42678.t1.exon6;Parent=MS.gene42678.t1
chr3.3 CDS 86399543 86399637 86399543 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86398970 86399037 86398970 ID=MS.gene42678.t1.exon7;Parent=MS.gene42678.t1
chr3.3 CDS 86398970 86399037 86398970 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86398742 86398852 86398742 ID=MS.gene42678.t1.exon8;Parent=MS.gene42678.t1
chr3.3 CDS 86398742 86398852 86398742 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
chr3.3 exon 86398120 86398249 86398120 ID=MS.gene42678.t1.exon9;Parent=MS.gene42678.t1
chr3.3 CDS 86398120 86398249 86398120 ID=cds.MS.gene42678.t1;Parent=MS.gene42678.t1
Gene Sequence

>MS.gene42678

ATGGCTGCAGACGAAGGAAAGGTGAAAATTGAAAAGTTCGATGGTGCGGACTTTGGCTTTTGGAAGATGCAGATCGAAGATTATTTGTATCAGAAAAAGCTACATCAACCTCTCACAGGAAAGAAACCAGAATCGATGAAGGATGATGAGTGGAACCTTCTCGATAGACAAGCACTTGGTGTTGTGCGATTGTCGTTATCTCGAAATGTTGCTTTTAACATAGCAAAAGAGAAAACCACCGCTGGTCTTATGAAGGCTCTTTCTAGCATGTACGAAAAGCCTTCAGCATCAAATAAAGTTCATTTGATGAGGCAGTTGTTTACACTTCGGATGACAGAAGGCGCATCAGTGGCGCAACATATCAATGAACTTAATATTGTCACAACCCAATTAAGTTCAGTTGGTATTGAATTTGACGATGAGGTACGAGCATTGATACTTTTGTCTTCCCTACCAGATAGTTGGAGTGCTACTGTCACAGCTGTGAGTAGCTCCTCGGGAAGCAAAAAGATGAAATTTGATGATGTTCGTGATCTGGTACTCAGTGAAGAGATCCGACGGAGAGAGTTGGGTGAATCTTCATCCTCTTCAGTATTGCATACAGAGTCAAGAGGAAGAAATTCAACCAGAGGAAATGGACGTGGTAAATCAAAGGCCAGACAATCCAAATCCAGAAATCATCGTAGTTCTCAGAACTCGAAATCTATCGAGTGTTGGAATTGTGGAAAGACGGGACACTTCAAAAATCAGTGTAGGCTCCCAGCAAAGAATCAAGAGGCGAAAGATGAGGCAAATGTTGCTTCCACCTCAGGAGGAGGTGACGCGTTGATATGTTCTTTGGAGAGCAAGGAAGAGTCTTGGGTGTTAGACTCTGGAGCGTCTTTTCATGCTACTTCCCAGAAAGAATTCTTCAAGAATTATGTCCCCGGTAACCTTGGTAAAGTTTACCTTGGAAATGAACAATCTTGTAAGGTTGTGGGCAAAGGTGAAGTTAAGATTAAGTTGAATGGGTCTGTATGGGAATTGAAAAATGTCAGACATATTCCCGACCTCACGAAAAACTTAATCTCCGTAGGCCAGTTGGCTGACGAAGGCTACACAACAGTCTTCCACGGTGATTACTGGAAGATTTCAAAAGGTGCAATGACCATAGCTCGCGGTAGAAAGAGTGGTACTCTTTACAAGACAGCTGGAGCATGCCATTTGATTGCAGTTGCAACAAATGAAAATCCTAATCTATGGCACAAGAGATTAGGCCATATGAGTGAAAAGGGGATGAAGGTTATGCACTCAAAAGGAAAACTACCAAGTCTTCGGTCAATAGAAATTGACATATGTGAAGACTGTATACTTGGAAAGCAGAAGAGAGTCAGCTTTCAGACAAGTGGAAGAACCCCAAAGAAGGAGAAACTTGAGCTTGTTCACTCTGATGTTTGGGGTCCAACAACTGTCCCATCCATTGGTGGGAAGCATTACTTCGTGACTTTTATCGATGATCACTCTAGGAAGGTATGGGTATACTTTCTGAAACATAAGTCTGAAGTATTTGAAGCTTTCAAGAGATGGAAAGCCATGGTGGAAAATGAGACAAGTTTGAAGATCAAAAAGCTCAGAACCGACAATGGTGGTGAATATGAAGACACCAAATTCAAGAAGTTTTGTTATGAGCACGAGATCAGAATGGAAAGAACTGTGCCAGGCACTCCCCAACATAATGGTGTAGCTGAGCGTATGAATAGAACATTGACTGAGAGAGCCAGAAGCTTGCGTGTGCAGTCAGGCTTACCAAAGAACTTCTGGGCAGAAGCAGTCAACACATCAGCTTACTTAATCAACCGAGGTCCATCGGTGCCATTGGAGCATAAAATACCAGAAGAGGTATGGAGTGGAAAAGAGGTAAAACTCTCACATCTTAGAGTTTTCGGCTGTGTAGCATATGTGCATATTAGTGATCAAGGTAGAAATAAACTTGATCCCAAATCCAAGAAGTGCACTTTCATCGGTTATGGTGAAGATGAGTTTGGCTACCGCCTCTGGGATGATGAAAACAAAAAGATGGTTCGCAGTAGAGATGTGATCTTCAATGAAAGAGTGATGTACAAAGACAAGCATAACACAACCACCAACGACTCAGGATTGAGCGAGCCTGTTTATGTAGAGATGGATGATGTTCCAGGAAGTCCCACAGATGAGATTCCCCAATCAGAGGAATTGGCAGAATCAAGCATCAGACAACCGTCTGACACACCAGTGCATCCTACTCCAGTTCCTGAATTAAGAAGGTCTTCTAGACTTCGTGTTCCAAACAGCAGATACATAAACTACATGTTGTTAATTGATGGAGGAGAGCCTGAAGATTATGATGAAGCATGTCAGACCACGGATGCTAGTAAGTGGGAGCTTGCCATGAAAGACGAAATGAAGTCTTTGATCTCCAATCAGACATGGGAACTAGCTAAGTTACCCAAGGGAAAGAAGGCATTTCACAACAAATGAGTGTATCGAGTAAAGGAGGACCATGATGGCTCTAAGAGATACAAAGCCCGACTAGTGGTCAAAGGATTCCAGCAGAAAGAAGGAATTGACTACACCGAGATTTTTGCTCCAGTGGTGAAGCTCAATACTATCAGGTCTGTCTTAAGTATTGTTGCCAGCGAAAATCTCTATCTTGAGCAGTTAGATGTGAAGACTGCATTTCTTCATGGAGACTTAAATGAGGAGATATACATGCACCAACCAGAAGGATTCTCAGAAAAAGGGAAAGAGAATATGGTGTGCAGGTTAAAGAAGAGCTTGTATGGCCTGAAACAAGCTCCAAGGCAGTGGTATATGAAGTTTGAAAGCTTCATGCACAAGGAAGGTTTCCAGAAGTGCAATGCCGACCATTGTTGCTTCTTCAAGAGATATAAGTCAAGTTATATCATTTTGCTACTTTATGTTGATGATATGTTAGTAGCAGGCTCAGACATTGATGAGATCAAAAACTTGAAGATGCAATTGTCAAAAGAGTTTGACATGAAGGATTTAGGTCAGGCAAAGAAAATTCTTGGTATGCAAATCACGAGAGATAAGCAAAAAGGAGTTTTGCAGTTATCTCAAGCAGAGTACATCAACCGTGTTTTGCAAAGATTCAACATGGGCGATGCCAAATCGGTTAGCACACCGTTGGCAAGTCATTTTCGCCTATCTCAAGAACAATCACCTCAGACGGAGGAAGAAAAAGAACTCATGGCCAGGATTCCATATGCTTCAGCAATTGGAAGTTTGATGTACGCAATGGTCTGTACGAGGCCAGACATTGGCCATGCAGTGGGAGTTATTAGCAGGTTTATGTCAAATCCAGGTAAAGCTAATTGGGAAGCGGTTAAATGGATTTTGAGGTATCTAAGAGGCACCACAGAGAAATGTTTGTACTTCAGCAAAGCAGAGATAAAAGTAGAAGGCTACGTAGATGCAGACTTTGCTGGTGAAGTTGATCACCGAAGAAGTACAACTGGTTATATATTTACTGTTGGTACTGGAGCAGTTAGTTGGATGTCGCGAATACAAAAGATTGTCGCTTTATCCACTACAGAGGCTGAGTATGTAGCAGTAACAGAAGCTAGCAAAGAATTGATATGGCTTCAAGGATTGTTAACAGAGTTAGGATTCATGCAGGAGAAATGTGCTTTGTACAGTGATAGTCAGAGTGCGATACATCTGGCAAGGAATTCAGCATTTCATTCGAGAACAAAGCACATAGGTCTTCGTTATCACTTCATCAGATCTCTTCTTGAGGATGAGGTTCTAACATTGATCAAAATTCAAGGAAGTAAGAATCCCGCAGATATGTTAACAAAGGTGGTGACTATCGACAAACTGAAGTTGTGCTCAACTTCAGTTGGCCTGTTAGAATAAGAGACCAGAGAAGGCTGCTGCATGATCGAGGTGTGAAGACCGATTGAAATCAGTCTTCAAGTGGGAGATTGTTGGCAAATGGAGGGACCCACCATTGCATGTGTGAATAAAAGAATGAATAAAATACACCGAAAGTTAAATGACCGAAAGTTTTTGGTATTTGACAGCAATACATGTTTGAAAAGCATGGCAATTGTTGGTGAACATTGTTGGGTACCTACTACATAGTGCAATTGTTGGTGAATAATTGGTAGTAGGTAATTGGTAGTAGGTGAGGCAATGACTTTGCACCCCTATAAATTGCTTGCTTGCAAACCATTGTAATTACAACACAGAACAACAACAACAACACAAAATATATTACATCAGTAGAGAGTTTAGAAAAACTCAGTGTGAGAATTTTAGGAGAAAATTCCTGGGTGTAATTGGGTTGTGGGTAGTGAGAGTTTGTGAGTGTTTGTAAACACATATTTCCTTTATTAAAAAGATCTGCAGCAGCAGTCCGGAGAGTAGGCATTATTGGCCGAACTTCGTTAACAATCTTGTGTGTTGTTATTCCGCATTTATTCCACTTCTACTTAATCTGACCATGGGGAAATTGTGCGTAGTTTCCTAACAACAAAGTCATCATATCATCCATACCATAACAAATCCTTACCTTGGCCAAATTAGGTAAAGCATTCAAGTTTACTATTGGAGGATCAAGCGACTCTCGCGAACTCAACAGATGTAATTTTGCATTCAAATCTTCTAGAATAGGAAAACCATATATAAACTTCACAAAACATTCAGGAGGTGTGAAAAAAACTCTATCCAAATGAAGAGTTTTGACAAGAGGAAAATCCACTTTATCAAATTTTTTGATAAGTAAGTTTCCCAACGTAAGAATCTGAAGAGCCTTACAATTGAGAATGCGAGGAGGTAAATTGATAGAACGCTGTTTATCAGTCATGTTGAAGTTAAGATTCTTGACTCCTCTTTCCATCACAAATTTAAACATTCTATCAAATTGTCTTTGGTTGAAGCGGGAAGAGTGACTTAATTTGAAAGTAAAGGAATAGATGGGAGTTTTTTTGTCTCGCAACCGGAACATGGCTAAGTCAACAAATCTGCGAAAGCTGTTGAAATTTGGGGAGGTTTTGTCGTCAAAATCAAGAGTGAACACGGAGAGCCATACCGGTTTCCATCTCTTAGAAAGTATACTTGTGGTTGCAGCAAGTTTGGTTGGGAGAAAAGAGAGAATATGACTGAGTATTGAATCCGGCATGTAGCTAATTCTATCAACCGTGGGAACTGATCGCCTACAAGAAAAAGAAGTCATCTTTTCTTCTAATGCCGGCAAAGCAAAGGGTGAAGGTTTGTGTGTATATATACACATATATATAGAAGTCTTCTCTTGTAGTTGTATCCGATCACGAAAGTCAATTAGGTTTTGTTTTTTTTTTCTTTTCTTTCTTGGGTACCAAGTCAAATAGGATTTTCCCCTTAAAAAAAAACAAAGAAAGTCAAATAGGATTTGGGCAATATATCTTTTTTTTCTTAAAAAAAACACCAAAATCAAAATTAATTTATCAATGTCTTTTTTATGAAATATTAAATATAAATTTTGATTCAAATATCAAAAATATTTTAAAAGAAAAAACACACACACACACACATATATATATAACCAAGTCCTAGCTTCATCCGGGCTTTGTTTGAGAGTTTAGAGGAGAGGCAAGGAAAGACTTTGGGGACATAAATATATGAAAAATTGATAAATCTTTCACATTTTTTTAAAGAGTCTTTTTCTAGAGAGTGATAAATCAATGTTTATGATTTTTTTTTTGGTGAACAATCAATGTTTATGATTAATATATTTTTAAACAGGGCTAAGTCCGTACAGAGCTTGCTCTGGCTTTAAACGGGACCCCCGCAAGTGGGCGGTGGGATTGGTCCCTTCAGATTAGTCGATTATTGGATCGGATAACGAGTTTTCAAAAAAAATAATAATTAATTTTAAGAATATTATAACAACAATATATATTAAATTTGAGGAATTCATATAAACCCTCCCAAACACCCAAAACCCTCATCCAATACAGTTTTTTAGGTCCCCAAATAAGGAGGATTTTATATTTTGAAGAAAAATAAGTCTCTCCTTCCAATGTCCTCTATTTCTTTCATTTATCTTTCCTTTTCTTTCAAACACTCCACTCCCTTTCCATTGGCTATATTCCGTCAAATTGTATTATATATATAAACATTCAAGAAAAGTTAATAGACGGATTTTTGGATCTTCCAATTTCAAATAAAAAATAGACACCGTTTTTGCAAAAGTTCTTACAAACTAGATTTATGCAAAAAAAACCAGCCATACTAAAAAAAGAATAAAGATACAAAAAAAAGTAGAAAAGAAAGATTTTAAATTAAACCAGTTAAAAAAAATTACCTCAATTTTCAACAAGTCCCCCACAACGATGCGAAAGAAATTATAAATCTCAAGGCAAGTGTAAGAATATATTGTCGTAGTAAAAAGAGTATTATTTCCCCATGAAATTATGAATCTCAAGACAAGTTTTCTTTTCTAAGTGTTTAGTTAAATTGTATTTTGGTTTTGAAAGACGGTGTTTGGTTTTGGTTTTGAAAATATGCAATTAATTAAAAACGTTTGGGGATCATGGAGTTCAAATTACAATGAATAATCCTAGTTCAAAATCTTTTCTTATGTTTTGTAAAATCATTGCCTATAAGGATGAGGTAACTTTTAAAAATATCTTTTGTCATCTTGCAAGAACAAAGGGCTTGCCTTACCAACATAGCTCGTTATTCTCACGATTTCTATGTTCGTAAGATTGGTTGCACCCTATTACTCATATCATTCCAAAAATCTTTAAGTTGTTCTCATGCTTCAAGACTTTTGTCTAGCTTTATATATCCAACAATTTTTTTGTCTCTCAACAAGAGAAAAAGGATCGTGGAAAGTTCATCATAAGATCACTTTCCATGATCTCAAGACAAGGGTGAACTACTCACTCATCGTAATGACGAGCTTCATAAATAAAAACAGAGATAAGAAAATAAACTAAAAGAAAATTTTATTAAATTCTTTTTCAAAATTTATTTGTGTCGTTTAGCTTTCAAGAAAATAAGCTACACATAAGTATGTTACTAGTTATTTAAAGCGTGTTTGTTTCATGATTTCAATATTTATTTGTGTCGTTTAGCTTTCATATGAATTATCACCACATATGTATTTGATATTTTTTTTTTGACCAAATTATTTGATAAATTCTTTATATTTCTAAAAAAGTGGATCGCTAGATTAAAAATTGAGTAAATTTTATTCTCAAAAGTAAATAATAAGTCAGAACAATTTTTTATAAATTTGTATGTATTAAACATGAAGGAGAAGAGATAAGAGTATTGTGTGGATAATGGCATCATCATCATCATCAGTTGTGAGTCCCGCGCATGTTAGCAAGTACAGCAAACCATTGCATTGTTGTTCAAGTCGGAAGGTGAAGTGTGAACTGTCGCCATCATGGAAGGAAGGCAGGCGCATGGTCTCCATCTCTCTTGTTCTCTCCCACTTCATTCTCTTTCCTAACCGTATCTCCTCTCTCTCTTTTTAATCATTTTTTTTTCTTTCTGTTTACGGTAACAACTTTCACCTTCTTTGTTATGCACATTGAATTTCTCTTTTATTCTATGTTACAGGTGCTACTGCTGAAGGAAGCATTATGGACAAATATGTTAAGAGGTATATTCATTTTTTTTTGCTTAAATTTGGTTTGAAATTATACTTTTTCATACACCCTTGTTTTGGATTTGTGATTTGTCTATATTAAGTTCCCATTATTCCCTGTTTGGAATCCTATTTGTTTAATCAAGGCTTATTATAAACTATAAGTTGTTTTCGTATATAAACTATAAGCTATTCTGAAGAACTTAAGAAAATAAGCTGAAAATAATTTAAGAACTTGTCATATGCTATTATTATTAGCTCTTCCGGTTCCTAACAGTCTCTCCAGTAACCGGGCAAGTAGATAAACTTAAGTAAGTCAATCCAAATAGCCCTAAAGTTTAATTAAATCAAACAAGATATTCACATCTCCAAAAACTTATCTTAGTTTTCCCCAGTGGTGGTGCTTAATGGTACTTGCCCATTAAGAATTGGGTACCTCCATTTTAGACATTATTTGAATGATACTTTATTGGCAAAAGTACGTCTACGCTATATAGGTACTCTCCCTTTTAGAATGCAATGTTATTCGTGAGACCTATTTCGTAATTTTTTTTGAGGTGCTAGCTTGAAGGGATAAAGTGCAAACATATTAGGGAGCCTTGTTCTTTGTCATGTTATTAGCCGAATCGAAGTACATACTCCTTTTTGTTCATTCTTTGAGAATATAAAAAAAAAGACATGCATGATCATAGGATATTGGTGGGGATGTACATGATTCGTTTGATGATGGTGGTAGTGATCGACTTCTTGAATTGAAAGAATTGTCTCTTGATGAATTAAACATATAAGCTATACTTTTCCGGATGATGAGAACACGGAGATGAAAATGATACAATTAGTATTAAACGGTAAACAGTGAGCAATTGAGTGCAGTTGAATACAACCAAGACTTATTTCAATTAGGGCTAATGATATATTTTGTTGCATTTTGACATTAGTTGGGGAAAAACATACATTTATGATATATTTCCCAGTATTTTTGATGTGGATAATCAAAAAAGAATGTCTGATTTTTTGTTATGATCACAAGTAGGTTTTTTTTAAGCTGTGATTATTATCTGCATATATAGTCACATATTAAATATACGAAAGTCTCTTTACAAATAATATGCATTTATGTTAAAGTGCCTACGTTGTATCATATCTTTAGTCCTTGAATTAAATTAGAGTAGCTTTTAGATTTGCTTTTTATAATTTGTACTGGGTCTTGTATTATTGACATTAAACTTAAATTAATGTTTTGTTCCTCCAAAGAATGATAATTCTGATTCTAATTTGTTCTTAACTACTCTAGAAAAAAGCTAGAGCCTCTGGAGACTTACGTACCAGCTGTAATCCTCACACAGTTCCAGATCAAGGATTTGGGTAATGCCAGTTTTTCGTGAACCGCTTTCTCTGTCATGCTAGATATCCAGATATTTGTAAACCTCTGATTTTGGTGTTACGTATTTATATCATACTTGGTTCTTATGGATTTGCTAAGATAACTATGTAAAGCAAATAAACACTCTATAAACATGAATTTAACAAGACGCGTTTTTCCTTCTTTCATTGGTAAATTTGGCCTCATTCTGATAAACGAATGCATTTATTCACTTGATTCATGTTGCTGAATCTTCTTGTCATTATTTTCCATGTTCACTCTTCACAACTAGGATTGCTCTAGGTATTTCACATGTTCTGCAATTATCATAAATTGAAGTTGATATGAAATCTGCTTATGCCTTTCTTTCTACTATTACAGAAAAAACTTTAGAGGGTAATGAGCCCCAATTTTCCCTCTGCCGATCTCTACTTCGCTCTGGGCCTGCAGCATCTCTTCGTGTAAATATTCGAGCAGTAAGTAAAGGCTTCCTTTAACTTCTGAGTTCTTCTTTACTCTCGCATCTCTTTTACCTTTGGATGTTAAAAGTTTTTCGTATACGATTTATTTTTCAAAAAAATGAATTCCCTGTTGGAAGTTTTCCCCCTCCCTTTTGATTGAGTCAGTCCAAAGCAATCTGAGTCTTCATTTTTGTAATTGAGTTTCAACTTTCAAGTGTATATATACTTAAAGTCGGTATTATTTTCTACACAGCTTCTCAAGATTTTCAAGTCCCATGGAAGGAAAAATAAAAGAGCATTCATTATAAGCCAATTTCTTCCATATCATGCAGATTTCAGAAAACTCCCAAACAGCATAGAACAATAGATAGCTTCATTGATTGTTTTTAAAGCTCGACCCATTGTTGATATGATATTCGTTAAATAATCTATTTACGATTGTCCATGTTTATCATCATTTACTTTATGATATATATTCACCTGTATGAAAGTTAATTAGTGGTTCACAAACTTTTTCTAGGTCGCGCAATATGCTTCTGACAGTGGCAATGGTAAAACTGCATTGAACAATGTTGATGATTGTCTGAGGTGACATAATCAATTTCCCGCAAAAATTATTATGAAAATAATGTGCTTGAAATAACTATTACCAGTTTTATGATTATGAAAAACTTAAATCCCAACTGAAGAATTCTGTTTCTGAAGGTCACTGGAGGACCTTGATTCCTTGCTTCTGCGTGCTTCAAGAAATGATCCTGATGCCTCCGTTAAATCAATGAAGGCAAAAGTCAGTTCTGCCCTTATTGCTCTGGACAGGTGATTTGAATTCTTTGTGTGGTTTTCCTCCCTTTTTCTTGTACATAATAAGGATTTAGATCCTTTGCAGAATCTCTCTTAATCTTACAGCCTTTGGCCGACTAGCTAAGGTCCCGTTTATTTTGTGAAAACATTTTATATTCATCTTCTAAAATATGTGTTCATTTTAACTTGCTAATAAGAAGATATGAGACTTTTGAAACGAATCATTGTGATGGAAAGGAGATGAAATGTTAGCTAGGGATGATGCATATCTAGAAATAATGAAAACCATTATTTTGACATTTTTATTGTTTACAAAAAATGTAAACAATTGTTCGCTTCAAGAGTCTTGCATTTTGCTAACAGAGTAAAATTAGCAGAGATTTTAAAAAAATAATAGAAAATGTTTTCGCAAAATAATGGGATTTAACTTTTTCGCTAGTGTCATACCAATTTACAGTTTACACACAGCACCATCTGATGATATTCTTAATATGCTTTTGGTTTCAGCCTCTTACAAACGGTACCATCAGACGTGTTAAGTAAGGGAAAGGTTATAGCTGATTCATACTTGGACCGGGAAGACATGGAAACGGAGAACTTGGACCCTGGTTTAAAGCAATTAGAATCAATACTGTGA

Protein sequence

>MS.gene42678.t1

MAADEGKVKIEKFDGADFGFWKMQIEDYLYQKKLHQPLTGKKPESMKDDEWNLLDRQALGVVRLSLSRNVAFNIAKEKTTAGLMKALSSMYEKPSASNKVHLMRQLFTLRMTEGASVAQHINELNIVTTQLSSVGIEFDDEVRALILLSSLPDSWSATVTAVSSSSGSKKMKFDDVRDLVLSEEIRRRELGESSSSSVLHTESRGRNSTRGNGRGKSKARQSKSRNHRSSQNSKSIECWNCGKTGHFKNQCRLPAKNQEAKDEANVASTSGGGLSEPVYVEMDDVPGSPTDEIPQSEELAESSIRQPSDTPVHPTPVPELRRSSRLRVPNSRYINYMLLIDGGEPEDYDEACQTTDASKAFKFTIGGSSDSRELNRCATAEGSIMDKYVKRKKLEPLETYVPAVILTQFQIKDLEKTLEGNEPQFSLCRSLLRSGPAASLRVNIRAVAQYASDSGNGKTALNNVDDCLRSLEDLDSLLLRASRNDPDASVKSMKAKVSSALIALDSLLQTVPSDVLSKGKVIADSYLDREDMETENLDPGLKQLESIL