Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83824.t1 | XP_003599006.2 | 94.8 | 194 | 5 | 1 | 1 | 194 | 1 | 189 | 4.50E-54 | 221.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83824.t1 | G7IZC1 | 94.8 | 194 | 5 | 1 | 1 | 194 | 1 | 189 | 3.3e-54 | 221.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene83824 | 0.830689 | 2.55E-55 | -1.69E-46 |
MS.gene049171 | MS.gene83824 | 0.911838 | 3.86E-83 | -1.69E-46 |
MS.gene049173 | MS.gene83824 | 0.858009 | 1.11E-62 | -1.69E-46 |
MS.gene049217 | MS.gene83824 | 0.869805 | 2.35E-66 | -1.69E-46 |
MS.gene049222 | MS.gene83824 | 0.912604 | 1.61E-83 | -1.69E-46 |
MS.gene049232 | MS.gene83824 | 0.860338 | 2.21E-63 | -1.69E-46 |
MS.gene049285 | MS.gene83824 | 0.921893 | 1.99E-88 | -1.69E-46 |
MS.gene049320 | MS.gene83824 | 0.909718 | 4.18E-82 | -1.69E-46 |
MS.gene049369 | MS.gene83824 | 0.802817 | 4.69E-49 | -1.69E-46 |
MS.gene049396 | MS.gene83824 | 0.837853 | 4.07E-57 | -1.69E-46 |
MS.gene04939 | MS.gene83824 | 0.804354 | 2.25E-49 | -1.69E-46 |
MS.gene049427 | MS.gene83824 | 0.808878 | 2.49E-50 | -1.69E-46 |
MS.gene049609 | MS.gene83824 | 0.901571 | 2.34E-78 | -1.69E-46 |
MS.gene049627 | MS.gene83824 | 0.807527 | 4.84E-50 | -1.69E-46 |
MS.gene049633 | MS.gene83824 | 0.869399 | 3.19E-66 | -1.69E-46 |
MS.gene049805 | MS.gene83824 | 0.876494 | 1.34E-68 | -1.69E-46 |
MS.gene05010 | MS.gene83824 | 0.884943 | 1.24E-71 | -1.69E-46 |
MS.gene050163 | MS.gene83824 | 0.889556 | 2.18E-73 | -1.69E-46 |
MS.gene050165 | MS.gene83824 | 0.87651 | 1.32E-68 | -1.69E-46 |
MS.gene050170 | MS.gene83824 | 0.843109 | 1.71E-58 | -1.69E-46 |
MS.gene050216 | MS.gene83824 | 0.825353 | 4.91E-54 | -1.69E-46 |
MS.gene050323 | MS.gene83824 | 0.86143 | 1.03E-63 | -1.69E-46 |
MS.gene050333 | MS.gene83824 | 0.871176 | 8.34E-67 | -1.69E-46 |
MS.gene050381 | MS.gene83824 | -0.803209 | 3.89E-49 | -1.69E-46 |
MS.gene050444 | MS.gene83824 | 0.828955 | 6.74E-55 | -1.69E-46 |
MS.gene050496 | MS.gene83824 | 0.824282 | 8.78E-54 | -1.69E-46 |
MS.gene050504 | MS.gene83824 | 0.896161 | 4.81E-76 | -1.69E-46 |
MS.gene050518 | MS.gene83824 | 0.895679 | 7.62E-76 | -1.69E-46 |
MS.gene050520 | MS.gene83824 | 0.806835 | 6.78E-50 | -1.69E-46 |
MS.gene050538 | MS.gene83824 | 0.870944 | 9.95E-67 | -1.69E-46 |
MS.gene050577 | MS.gene83824 | 0.863554 | 2.29E-64 | -1.69E-46 |
MS.gene050593 | MS.gene83824 | 0.85281 | 3.61E-61 | -1.69E-46 |
MS.gene050612 | MS.gene83824 | 0.894929 | 1.55E-75 | -1.69E-46 |
MS.gene050647 | MS.gene83824 | -0.81254 | 4.03E-51 | -1.69E-46 |
MS.gene050662 | MS.gene83824 | 0.829805 | 4.19E-55 | -1.69E-46 |
MS.gene050675 | MS.gene83824 | 0.867342 | 1.47E-65 | -1.69E-46 |
MS.gene050686 | MS.gene83824 | 0.812583 | 3.94E-51 | -1.69E-46 |
MS.gene050690 | MS.gene83824 | 0.807005 | 6.24E-50 | -1.69E-46 |
MS.gene050699 | MS.gene83824 | 0.8809 | 3.75E-70 | -1.69E-46 |
MS.gene050747 | MS.gene83824 | 0.907383 | 5.38E-81 | -1.69E-46 |
MS.gene050767 | MS.gene83824 | 0.812775 | 3.58E-51 | -1.69E-46 |
MS.gene050770 | MS.gene83824 | 0.815425 | 9.31E-52 | -1.69E-46 |
MS.gene050772 | MS.gene83824 | 0.926003 | 8.51E-91 | -1.69E-46 |
MS.gene05080 | MS.gene83824 | 0.910731 | 1.35E-82 | -1.69E-46 |
MS.gene05081 | MS.gene83824 | 0.844811 | 6.00E-59 | -1.69E-46 |
MS.gene050868 | MS.gene83824 | 0.886402 | 3.53E-72 | -1.69E-46 |
MS.gene050871 | MS.gene83824 | 0.883677 | 3.66E-71 | -1.69E-46 |
MS.gene050876 | MS.gene83824 | 0.805837 | 1.10E-49 | -1.69E-46 |
MS.gene050904 | MS.gene83824 | 0.829756 | 4.31E-55 | -1.69E-46 |
MS.gene050950 | MS.gene83824 | 0.902588 | 8.31E-79 | -1.69E-46 |
MS.gene050986 | MS.gene83824 | 0.877597 | 5.53E-69 | -1.69E-46 |
MS.gene05100 | MS.gene83824 | 0.866912 | 2.02E-65 | -1.69E-46 |
MS.gene05105 | MS.gene83824 | 0.856098 | 4.05E-62 | -1.69E-46 |
MS.gene051167 | MS.gene83824 | -0.802345 | 5.86E-49 | -1.69E-46 |
MS.gene051228 | MS.gene83824 | 0.852442 | 4.60E-61 | -1.69E-46 |
MS.gene051268 | MS.gene83824 | 0.823996 | 1.03E-53 | -1.69E-46 |
MS.gene051317 | MS.gene83824 | 0.834726 | 2.54E-56 | -1.69E-46 |
MS.gene051387 | MS.gene83824 | 0.834643 | 2.66E-56 | -1.69E-46 |
MS.gene051551 | MS.gene83824 | 0.879912 | 8.46E-70 | -1.69E-46 |
MS.gene051617 | MS.gene83824 | 0.818393 | 2.01E-52 | -1.69E-46 |
MS.gene051666 | MS.gene83824 | 0.860836 | 1.56E-63 | -1.69E-46 |
MS.gene051694 | MS.gene83824 | 0.829377 | 5.33E-55 | -1.69E-46 |
MS.gene051734 | MS.gene83824 | 0.843212 | 1.61E-58 | -1.69E-46 |
MS.gene051810 | MS.gene83824 | 0.872729 | 2.54E-67 | -1.69E-46 |
MS.gene051838 | MS.gene83824 | 0.855023 | 8.33E-62 | -1.69E-46 |
MS.gene051858 | MS.gene83824 | 0.852646 | 4.03E-61 | -1.69E-46 |
MS.gene051874 | MS.gene83824 | 0.848422 | 6.19E-60 | -1.69E-46 |
MS.gene051949 | MS.gene83824 | 0.824057 | 9.92E-54 | -1.69E-46 |
MS.gene052164 | MS.gene83824 | 0.879815 | 9.16E-70 | -1.69E-46 |
MS.gene052271 | MS.gene83824 | 0.852141 | 5.61E-61 | -1.69E-46 |
MS.gene052379 | MS.gene83824 | 0.852708 | 3.87E-61 | -1.69E-46 |
MS.gene052421 | MS.gene83824 | 0.85562 | 5.58E-62 | -1.69E-46 |
MS.gene052482 | MS.gene83824 | 0.859205 | 4.86E-63 | -1.69E-46 |
MS.gene052484 | MS.gene83824 | 0.805414 | 1.35E-49 | -1.69E-46 |
MS.gene052486 | MS.gene83824 | 0.853368 | 2.50E-61 | -1.69E-46 |
MS.gene052501 | MS.gene83824 | 0.817972 | 2.50E-52 | -1.69E-46 |
MS.gene052503 | MS.gene83824 | 0.854033 | 1.61E-61 | -1.69E-46 |
MS.gene052505 | MS.gene83824 | 0.814429 | 1.55E-51 | -1.69E-46 |
MS.gene052506 | MS.gene83824 | 0.837586 | 4.76E-57 | -1.69E-46 |
MS.gene052605 | MS.gene83824 | 0.813714 | 2.23E-51 | -1.69E-46 |
MS.gene052615 | MS.gene83824 | 0.880637 | 4.66E-70 | -1.69E-46 |
MS.gene052670 | MS.gene83824 | 0.823413 | 1.40E-53 | -1.69E-46 |
MS.gene052822 | MS.gene83824 | 0.847366 | 1.21E-59 | -1.69E-46 |
MS.gene052823 | MS.gene83824 | 0.845761 | 3.32E-59 | -1.69E-46 |
MS.gene052825 | MS.gene83824 | 0.841256 | 5.31E-58 | -1.69E-46 |
MS.gene052870 | MS.gene83824 | 0.863418 | 2.52E-64 | -1.69E-46 |
MS.gene052872 | MS.gene83824 | 0.861745 | 8.27E-64 | -1.69E-46 |
MS.gene052916 | MS.gene83824 | 0.837163 | 6.11E-57 | -1.69E-46 |
MS.gene052966 | MS.gene83824 | 0.849878 | 2.44E-60 | -1.69E-46 |
MS.gene052982 | MS.gene83824 | 0.802516 | 5.41E-49 | -1.69E-46 |
MS.gene053009 | MS.gene83824 | 0.852105 | 5.74E-61 | -1.69E-46 |
MS.gene053103 | MS.gene83824 | 0.835508 | 1.61E-56 | -1.69E-46 |
MS.gene053104 | MS.gene83824 | 0.868755 | 5.16E-66 | -1.69E-46 |
MS.gene053107 | MS.gene83824 | 0.80314 | 4.02E-49 | -1.69E-46 |
MS.gene053117 | MS.gene83824 | 0.809384 | 1.94E-50 | -1.69E-46 |
MS.gene053203 | MS.gene83824 | 0.876627 | 1.20E-68 | -1.69E-46 |
MS.gene053207 | MS.gene83824 | 0.883022 | 6.38E-71 | -1.69E-46 |
MS.gene053213 | MS.gene83824 | 0.908848 | 1.09E-81 | -1.69E-46 |
MS.gene053286 | MS.gene83824 | 0.905386 | 4.53E-80 | -1.69E-46 |
MS.gene053322 | MS.gene83824 | 0.848834 | 4.76E-60 | -1.69E-46 |
MS.gene053420 | MS.gene83824 | -0.812742 | 3.64E-51 | -1.69E-46 |
MS.gene053436 | MS.gene83824 | 0.849278 | 3.58E-60 | -1.69E-46 |
MS.gene053479 | MS.gene83824 | 0.854192 | 1.45E-61 | -1.69E-46 |
MS.gene053480 | MS.gene83824 | 0.836254 | 1.04E-56 | -1.69E-46 |
MS.gene053574 | MS.gene83824 | 0.918758 | 1.05E-86 | -1.69E-46 |
MS.gene053579 | MS.gene83824 | 0.809474 | 1.86E-50 | -1.69E-46 |
MS.gene053626 | MS.gene83824 | 0.883431 | 4.51E-71 | -1.69E-46 |
MS.gene053632 | MS.gene83824 | 0.887364 | 1.52E-72 | -1.69E-46 |
MS.gene053824 | MS.gene83824 | 0.893044 | 9.07E-75 | -1.69E-46 |
MS.gene053916 | MS.gene83824 | 0.885989 | 5.05E-72 | -1.69E-46 |
MS.gene054003 | MS.gene83824 | 0.851105 | 1.10E-60 | -1.69E-46 |
MS.gene054374 | MS.gene83824 | 0.810666 | 1.03E-50 | -1.69E-46 |
MS.gene054408 | MS.gene83824 | 0.887267 | 1.66E-72 | -1.69E-46 |
MS.gene054595 | MS.gene83824 | 0.876898 | 9.68E-69 | -1.69E-46 |
MS.gene054600 | MS.gene83824 | 0.891773 | 2.92E-74 | -1.69E-46 |
MS.gene054642 | MS.gene83824 | 0.916259 | 2.21E-85 | -1.69E-46 |
MS.gene054706 | MS.gene83824 | -0.823319 | 1.48E-53 | -1.69E-46 |
MS.gene05470 | MS.gene83824 | 0.864891 | 8.78E-65 | -1.69E-46 |
MS.gene054927 | MS.gene83824 | 0.863763 | 1.97E-64 | -1.69E-46 |
MS.gene05494 | MS.gene83824 | 0.82267 | 2.09E-53 | -1.69E-46 |
MS.gene054954 | MS.gene83824 | 0.896284 | 4.28E-76 | -1.69E-46 |
MS.gene05505 | MS.gene83824 | 0.885092 | 1.09E-71 | -1.69E-46 |
MS.gene055154 | MS.gene83824 | -0.816736 | 4.74E-52 | -1.69E-46 |
MS.gene055206 | MS.gene83824 | 0.860508 | 1.97E-63 | -1.69E-46 |
MS.gene055212 | MS.gene83824 | 0.850826 | 1.32E-60 | -1.69E-46 |
MS.gene055224 | MS.gene83824 | 0.880367 | 5.82E-70 | -1.69E-46 |
MS.gene055289 | MS.gene83824 | 0.867553 | 1.26E-65 | -1.69E-46 |
MS.gene055362 | MS.gene83824 | 0.898144 | 7.08E-77 | -1.69E-46 |
MS.gene055397 | MS.gene83824 | 0.80612 | 9.60E-50 | -1.69E-46 |
MS.gene055499 | MS.gene83824 | 0.824173 | 9.32E-54 | -1.69E-46 |
MS.gene055502 | MS.gene83824 | 0.904043 | 1.85E-79 | -1.69E-46 |
MS.gene055577 | MS.gene83824 | 0.889256 | 2.85E-73 | -1.69E-46 |
MS.gene055636 | MS.gene83824 | 0.802511 | 5.42E-49 | -1.69E-46 |
MS.gene055638 | MS.gene83824 | 0.814666 | 1.37E-51 | -1.69E-46 |
MS.gene055647 | MS.gene83824 | 0.819948 | 8.88E-53 | -1.69E-46 |
MS.gene055722 | MS.gene83824 | 0.890121 | 1.31E-73 | -1.69E-46 |
MS.gene055748 | MS.gene83824 | 0.880863 | 3.86E-70 | -1.69E-46 |
MS.gene055750 | MS.gene83824 | 0.878821 | 2.06E-69 | -1.69E-46 |
MS.gene055751 | MS.gene83824 | 0.874496 | 6.45E-68 | -1.69E-46 |
MS.gene055776 | MS.gene83824 | 0.826912 | 2.09E-54 | -1.69E-46 |
MS.gene05589 | MS.gene83824 | 0.862477 | 4.93E-64 | -1.69E-46 |
MS.gene05592 | MS.gene83824 | 0.870009 | 2.02E-66 | -1.69E-46 |
MS.gene055941 | MS.gene83824 | 0.862263 | 5.73E-64 | -1.69E-46 |
MS.gene056040 | MS.gene83824 | 0.819863 | 9.29E-53 | -1.69E-46 |
MS.gene056046 | MS.gene83824 | 0.806417 | 8.31E-50 | -1.69E-46 |
MS.gene056083 | MS.gene83824 | 0.848003 | 8.08E-60 | -1.69E-46 |
MS.gene056166 | MS.gene83824 | 0.847449 | 1.15E-59 | -1.69E-46 |
MS.gene056374 | MS.gene83824 | 0.852804 | 3.63E-61 | -1.69E-46 |
MS.gene056409 | MS.gene83824 | 0.813865 | 2.06E-51 | -1.69E-46 |
MS.gene056422 | MS.gene83824 | 0.830536 | 2.78E-55 | -1.69E-46 |
MS.gene056446 | MS.gene83824 | 0.851555 | 8.22E-61 | -1.69E-46 |
MS.gene056448 | MS.gene83824 | 0.82466 | 7.16E-54 | -1.69E-46 |
MS.gene056449 | MS.gene83824 | 0.833356 | 5.59E-56 | -1.69E-46 |
MS.gene056487 | MS.gene83824 | 0.815434 | 9.26E-52 | -1.69E-46 |
MS.gene056504 | MS.gene83824 | 0.875631 | 2.65E-68 | -1.69E-46 |
MS.gene056510 | MS.gene83824 | 0.890661 | 8.05E-74 | -1.69E-46 |
MS.gene056511 | MS.gene83824 | 0.813476 | 2.51E-51 | -1.69E-46 |
MS.gene056610 | MS.gene83824 | 0.823932 | 1.06E-53 | -1.69E-46 |
MS.gene056657 | MS.gene83824 | 0.903551 | 3.09E-79 | -1.69E-46 |
MS.gene056692 | MS.gene83824 | 0.87629 | 1.57E-68 | -1.69E-46 |
MS.gene056897 | MS.gene83824 | 0.831649 | 1.48E-55 | -1.69E-46 |
MS.gene056898 | MS.gene83824 | 0.840068 | 1.09E-57 | -1.69E-46 |
MS.gene056947 | MS.gene83824 | 0.825768 | 3.91E-54 | -1.69E-46 |
MS.gene057011 | MS.gene83824 | 0.828747 | 7.57E-55 | -1.69E-46 |
MS.gene057048 | MS.gene83824 | 0.812893 | 3.37E-51 | -1.69E-46 |
MS.gene057076 | MS.gene83824 | 0.876438 | 1.40E-68 | -1.69E-46 |
MS.gene057086 | MS.gene83824 | 0.8044 | 2.20E-49 | -1.69E-46 |
MS.gene057129 | MS.gene83824 | 0.863972 | 1.70E-64 | -1.69E-46 |
MS.gene057146 | MS.gene83824 | 0.826993 | 2.00E-54 | -1.69E-46 |
MS.gene057331 | MS.gene83824 | 0.86449 | 1.17E-64 | -1.69E-46 |
MS.gene057416 | MS.gene83824 | 0.899345 | 2.17E-77 | -1.69E-46 |
MS.gene057658 | MS.gene83824 | 0.85824 | 9.44E-63 | -1.69E-46 |
MS.gene057734 | MS.gene83824 | 0.840335 | 9.25E-58 | -1.69E-46 |
MS.gene057831 | MS.gene83824 | 0.872393 | 3.29E-67 | -1.69E-46 |
MS.gene05787 | MS.gene83824 | 0.860814 | 1.59E-63 | -1.69E-46 |
MS.gene057926 | MS.gene83824 | 0.821347 | 4.24E-53 | -1.69E-46 |
MS.gene058019 | MS.gene83824 | 0.831702 | 1.44E-55 | -1.69E-46 |
MS.gene058130 | MS.gene83824 | 0.891735 | 3.03E-74 | -1.69E-46 |
MS.gene058323 | MS.gene83824 | 0.839377 | 1.64E-57 | -1.69E-46 |
MS.gene058334 | MS.gene83824 | -0.801755 | 7.75E-49 | -1.69E-46 |
MS.gene058338 | MS.gene83824 | 0.858145 | 1.01E-62 | -1.69E-46 |
MS.gene05837 | MS.gene83824 | 0.89715 | 1.86E-76 | -1.69E-46 |
MS.gene058419 | MS.gene83824 | 0.919102 | 6.84E-87 | -1.69E-46 |
MS.gene058459 | MS.gene83824 | 0.807145 | 5.83E-50 | -1.69E-46 |
MS.gene058544 | MS.gene83824 | 0.902976 | 5.58E-79 | -1.69E-46 |
MS.gene058723 | MS.gene83824 | 0.8734 | 1.51E-67 | -1.69E-46 |
MS.gene058773 | MS.gene83824 | 0.906824 | 9.81E-81 | -1.69E-46 |
MS.gene058838 | MS.gene83824 | 0.859818 | 3.18E-63 | -1.69E-46 |
MS.gene05883 | MS.gene83824 | 0.820345 | 7.21E-53 | -1.69E-46 |
MS.gene059022 | MS.gene83824 | 0.898043 | 7.81E-77 | -1.69E-46 |
MS.gene059023 | MS.gene83824 | 0.903254 | 4.20E-79 | -1.69E-46 |
MS.gene059029 | MS.gene83824 | 0.859806 | 3.21E-63 | -1.69E-46 |
MS.gene05913 | MS.gene83824 | 0.874411 | 6.90E-68 | -1.69E-46 |
MS.gene05914 | MS.gene83824 | 0.819593 | 1.07E-52 | -1.69E-46 |
MS.gene059305 | MS.gene83824 | 0.807665 | 4.52E-50 | -1.69E-46 |
MS.gene05934 | MS.gene83824 | 0.864221 | 1.42E-64 | -1.69E-46 |
MS.gene059367 | MS.gene83824 | 0.84072 | 7.33E-58 | -1.69E-46 |
MS.gene059368 | MS.gene83824 | 0.811609 | 6.43E-51 | -1.69E-46 |
MS.gene059536 | MS.gene83824 | 0.835056 | 2.10E-56 | -1.69E-46 |
MS.gene059667 | MS.gene83824 | 0.883742 | 3.47E-71 | -1.69E-46 |
MS.gene059677 | MS.gene83824 | 0.91006 | 2.86E-82 | -1.69E-46 |
MS.gene059688 | MS.gene83824 | 0.816808 | 4.57E-52 | -1.69E-46 |
MS.gene059695 | MS.gene83824 | 0.80159 | 8.38E-49 | -1.69E-46 |
MS.gene059711 | MS.gene83824 | 0.823625 | 1.25E-53 | -1.69E-46 |
MS.gene059718 | MS.gene83824 | 0.909877 | 3.50E-82 | -1.69E-46 |
MS.gene059756 | MS.gene83824 | 0.846228 | 2.48E-59 | -1.69E-46 |
MS.gene059801 | MS.gene83824 | 0.833219 | 6.05E-56 | -1.69E-46 |
MS.gene059865 | MS.gene83824 | 0.886924 | 2.24E-72 | -1.69E-46 |
MS.gene059902 | MS.gene83824 | 0.851258 | 9.98E-61 | -1.69E-46 |
MS.gene059960 | MS.gene83824 | 0.837492 | 5.04E-57 | -1.69E-46 |
MS.gene06000 | MS.gene83824 | 0.826716 | 2.33E-54 | -1.69E-46 |
MS.gene060482 | MS.gene83824 | 0.832418 | 9.56E-56 | -1.69E-46 |
MS.gene060703 | MS.gene83824 | 0.848634 | 5.41E-60 | -1.69E-46 |
MS.gene060728 | MS.gene83824 | 0.808612 | 2.84E-50 | -1.69E-46 |
MS.gene060762 | MS.gene83824 | 0.886481 | 3.30E-72 | -1.69E-46 |
MS.gene060778 | MS.gene83824 | 0.840099 | 1.07E-57 | -1.69E-46 |
MS.gene06077 | MS.gene83824 | 0.888884 | 3.97E-73 | -1.69E-46 |
MS.gene060804 | MS.gene83824 | 0.843154 | 1.67E-58 | -1.69E-46 |
MS.gene060818 | MS.gene83824 | 0.816084 | 6.64E-52 | -1.69E-46 |
MS.gene060835 | MS.gene83824 | 0.862257 | 5.76E-64 | -1.69E-46 |
MS.gene060837 | MS.gene83824 | 0.845589 | 3.70E-59 | -1.69E-46 |
MS.gene06092 | MS.gene83824 | 0.915416 | 6.04E-85 | -1.69E-46 |
MS.gene06097 | MS.gene83824 | 0.826773 | 2.26E-54 | -1.69E-46 |
MS.gene060982 | MS.gene83824 | 0.866595 | 2.54E-65 | -1.69E-46 |
MS.gene061041 | MS.gene83824 | 0.840652 | 7.64E-58 | -1.69E-46 |
MS.gene061134 | MS.gene83824 | 0.817202 | 3.73E-52 | -1.69E-46 |
MS.gene061150 | MS.gene83824 | 0.890181 | 1.24E-73 | -1.69E-46 |
MS.gene061200 | MS.gene83824 | 0.854138 | 1.50E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83824.t1 | MTR_3g026020 | 95.361 | 194 | 4 | 1 | 1 | 194 | 1 | 189 | 8.22e-128 | 357 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83824.t1 | AT5G08050 | 63.190 | 163 | 45 | 2 | 31 | 192 | 8 | 156 | 4.87e-51 | 162 |
Find 40 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTGTCGAGGTTGGATTAC+AGG | 0.269782 | 3.2:+15959848 | MS.gene83824:CDS |
GAGACAGAAGGAACTGGTTT+GGG | 0.333662 | 3.2:-15958344 | None:intergenic |
TGTGTTGTTGGTGGTTCTGC+TGG | 0.362863 | 3.2:+15959888 | MS.gene83824:CDS |
TAAAACTGTAGCTTCTAAAA+AGG | 0.383526 | 3.2:+15958367 | MS.gene83824:CDS |
GTTGCTTTGGTCTGTGTTGT+TGG | 0.388658 | 3.2:+15959876 | MS.gene83824:CDS |
ATTACAGGCTGTGGTTGCTT+TGG | 0.392075 | 3.2:+15959863 | MS.gene83824:CDS |
AGAGACAGAAGGAACTGGTT+TGG | 0.399810 | 3.2:-15958345 | None:intergenic |
CATTCTTGTGAGGAGTTTAA+CGG | 0.401167 | 3.2:-15959595 | None:intergenic |
TAGCGATAATCCTGCTTTCT+CGG | 0.404741 | 3.2:-15959670 | None:intergenic |
TAAACCTGCTTTCTCTGCCT+TGG | 0.422974 | 3.2:-15959637 | None:intergenic |
CGTTAAACTCCTCACAAGAA+TGG | 0.466698 | 3.2:+15959596 | MS.gene83824:CDS |
GCCATGGATTTGACCAGAAA+AGG | 0.471154 | 3.2:-15958317 | None:intergenic |
AAGAGTGATCCTGGAGTTGA+TGG | 0.471176 | 3.2:-15959762 | None:intergenic |
TTTGTGTTGAAGGAGGAGAA+TGG | 0.472964 | 3.2:-15958277 | None:intergenic |
GATCAAGCTGTTACTACAGA+TGG | 0.487910 | 3.2:-15958252 | None:intergenic |
CTATCAACAATAGAGAAACT+TGG | 0.493062 | 3.2:+15959690 | MS.gene83824:CDS |
CTGAGTGTGAAGAGTGATCC+TGG | 0.494258 | 3.2:-15959771 | None:intergenic |
ACCTCGACAACATTATCTTC+AGG | 0.496205 | 3.2:-15959837 | None:intergenic |
GAAGATAATGTTGTCGAGGT+TGG | 0.502536 | 3.2:+15959840 | MS.gene83824:CDS |
AACTGGTTTGGGAGTAGCCA+TGG | 0.510271 | 3.2:-15958333 | None:intergenic |
TTATCAGCCGCCGAGAAAGC+AGG | 0.520670 | 3.2:+15959660 | MS.gene83824:CDS |
GCTTTGGTCTGTGTTGTTGG+TGG | 0.531295 | 3.2:+15959879 | MS.gene83824:CDS |
CGAGGTTGGATTACAGGCTG+TGG | 0.533900 | 3.2:+15959854 | MS.gene83824:CDS |
AATTCAACTGTATTCCCACT+TGG | 0.537612 | 3.2:+15959537 | MS.gene83824:CDS |
TCCTAGGTTGTTCCCCAAGT+GGG | 0.538069 | 3.2:-15959551 | None:intergenic |
CTCTCAAAAGCAGAAGAACT+CGG | 0.539080 | 3.2:+15959717 | MS.gene83824:CDS |
TTAACCAAGGCAGAGAAAGC+AGG | 0.541705 | 3.2:+15959633 | MS.gene83824:CDS |
GCTACTGATCCATCAACTCC+AGG | 0.551246 | 3.2:+15959753 | MS.gene83824:CDS |
ATTCAACTGTATTCCCACTT+GGG | 0.553323 | 3.2:+15959538 | MS.gene83824:CDS |
ACTTATGATGATGACAATGA+AGG | 0.557494 | 3.2:+15958220 | None:intergenic |
GTCGATGTTACAGCACTCCT+AGG | 0.557906 | 3.2:-15959567 | None:intergenic |
TCCCACTTGGGGAACAACCT+AGG | 0.596244 | 3.2:+15959550 | MS.gene83824:CDS |
TTCAACTGTATTCCCACTTG+GGG | 0.603934 | 3.2:+15959539 | MS.gene83824:CDS |
GGAACAAGATAAACAAACAA+AGG | 0.608952 | 3.2:-15959816 | None:intergenic |
TAAGTTGCTCCATTCTTGTG+AGG | 0.609463 | 3.2:-15959605 | None:intergenic |
CTCCTAGGTTGTTCCCCAAG+TGG | 0.623775 | 3.2:-15959552 | None:intergenic |
TCCTGAAGATAATGTTGTCG+AGG | 0.624110 | 3.2:+15959836 | MS.gene83824:CDS |
GTTACTACAGATGGATGCTG+AGG | 0.660105 | 3.2:-15958243 | None:intergenic |
CGATAATCCTGCTTTCTCGG+CGG | 0.695629 | 3.2:-15959667 | None:intergenic |
GCAACTTAGACTATTAACCA+AGG | 0.701816 | 3.2:+15959620 | MS.gene83824:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAGTAAAGTTTCTATGT+AGG | - | chr3.2:15958935-15958954 | None:intergenic | 20.0% |
!! | ATCCTTTCTCATAATTAAAT+TGG | - | chr3.2:15958521-15958540 | None:intergenic | 20.0% |
!! | TACCAATTTAATTATGAGAA+AGG | + | chr3.2:15958516-15958535 | MS.gene83824:intron | 20.0% |
!!! | ATAAACTGTAATTTGTCATA+GGG | + | chr3.2:15958661-15958680 | MS.gene83824:intron | 20.0% |
!!! | ATATTTGTTTTCCTTTGTTT+TGG | + | chr3.2:15959286-15959305 | MS.gene83824:intron | 20.0% |
!!! | TTATTTTATTTTCTGCAAGT+TGG | - | chr3.2:15959937-15959956 | None:intergenic | 20.0% |
! | ACAGCATAATATTGCATAAA+AGG | - | chr3.2:15958467-15958486 | None:intergenic | 25.0% |
! | ATTACAGTTTATGTATACCT+AGG | - | chr3.2:15958653-15958672 | None:intergenic | 25.0% |
! | ATTGAAAACGTAAAATAACC+AGG | - | chr3.2:15958898-15958917 | None:intergenic | 25.0% |
! | CATAGAAACTTTACTTTATC+AGG | + | chr3.2:15958936-15958955 | MS.gene83824:intron | 25.0% |
! | TATACTGTAAAAAAATCACC+TGG | + | chr3.2:15958877-15958896 | MS.gene83824:intron | 25.0% |
!! | CATAAACTGTAATTTGTCAT+AGG | + | chr3.2:15958660-15958679 | MS.gene83824:intron | 25.0% |
!! | TAAAACTGTAGCTTCTAAAA+AGG | + | chr3.2:15958367-15958386 | MS.gene83824:CDS | 25.0% |
!! | TAAACTGTAATTTGTCATAG+GGG | + | chr3.2:15958662-15958681 | MS.gene83824:intron | 25.0% |
!! | TGGAATCTTTAGGAAAAAAA+AGG | + | chr3.2:15958851-15958870 | MS.gene83824:intron | 25.0% |
!! | TTTAATGCTCTTTGATGATA+TGG | + | chr3.2:15958620-15958639 | MS.gene83824:intron | 25.0% |
!!! | AGCTTTGTTTTACTTCTTTT+AGG | + | chr3.2:15959792-15959811 | MS.gene83824:CDS | 25.0% |
!!! | TGGAAATGCTTTGTTTAAAT+AGG | - | chr3.2:15959056-15959075 | None:intergenic | 25.0% |
AATTTACATGATGCCATGTT+TGG | - | chr3.2:15959076-15959095 | None:intergenic | 30.0% | |
ACCATATGAGTTGTACTTAT+CGG | - | chr3.2:15958736-15958755 | None:intergenic | 30.0% | |
AGTACAACTCATATGGTAAA+AGG | + | chr3.2:15958739-15958758 | MS.gene83824:intron | 30.0% | |
ATGGCATCATGTAAATTCTA+CGG | + | chr3.2:15959079-15959098 | MS.gene83824:intron | 30.0% | |
CACACATTGTTAAATTTCAC+AGG | - | chr3.2:15958581-15958600 | None:intergenic | 30.0% | |
CCACTTTAATAAACGGTTTA+TGG | - | chr3.2:15959435-15959454 | None:intergenic | 30.0% | |
CCATAAACCGTTTATTAAAG+TGG | + | chr3.2:15959432-15959451 | MS.gene83824:intron | 30.0% | |
CTATCAACAATAGAGAAACT+TGG | + | chr3.2:15959690-15959709 | MS.gene83824:CDS | 30.0% | |
GGAACAAGATAAACAAACAA+AGG | - | chr3.2:15959819-15959838 | None:intergenic | 30.0% | |
GGTCTGATAAGTACTAAAAA+TGG | + | chr3.2:15958977-15958996 | MS.gene83824:intron | 30.0% | |
TGTTTGTTCTACCAAAACAA+AGG | - | chr3.2:15959300-15959319 | None:intergenic | 30.0% | |
TTATGCAATATTATGCTGTG+TGG | + | chr3.2:15958468-15958487 | MS.gene83824:intron | 30.0% | |
! | AAACAAAGCATTTCCAAACA+TGG | + | chr3.2:15959060-15959079 | MS.gene83824:intron | 30.0% |
! | ACAGTCATTGTTATTGTCAT+AGG | - | chr3.2:15959343-15959362 | None:intergenic | 30.0% |
! | CTCTTTGATGATATGGTATA+TGG | + | chr3.2:15958627-15958646 | MS.gene83824:intron | 30.0% |
!! | ACTTTATCAGGCTTTTAAGT+AGG | + | chr3.2:15958948-15958967 | MS.gene83824:intron | 30.0% |
!! | ATGCTTTGTTTAAATAGGTC+TGG | - | chr3.2:15959051-15959070 | None:intergenic | 30.0% |
!! | TTTCTACGGTAATTTTCAAG+TGG | + | chr3.2:15959402-15959421 | MS.gene83824:intron | 30.0% |
AATATTATGCTGTGTGGAAC+TGG | + | chr3.2:15958474-15958493 | MS.gene83824:intron | 35.0% | |
AATTCAACTGTATTCCCACT+TGG | + | chr3.2:15959537-15959556 | MS.gene83824:CDS | 35.0% | |
ACATTTGATATGCTGAGATG+CGG | + | chr3.2:15958770-15958789 | MS.gene83824:intron | 35.0% | |
ACTAGTTCGAAAAGACATCT+GGG | + | chr3.2:15959234-15959253 | MS.gene83824:intron | 35.0% | |
ATTCAACTGTATTCCCACTT+GGG | + | chr3.2:15959538-15959557 | MS.gene83824:CDS | 35.0% | |
CATTCTTGTGAGGAGTTTAA+CGG | - | chr3.2:15959598-15959617 | None:intergenic | 35.0% | |
CGGTAGACCACTTTAATAAA+CGG | - | chr3.2:15959442-15959461 | None:intergenic | 35.0% | |
GCAACTTAGACTATTAACCA+AGG | + | chr3.2:15959620-15959639 | MS.gene83824:CDS | 35.0% | |
GTACTATGAGTCGTAATTTC+AGG | - | chr3.2:15959152-15959171 | None:intergenic | 35.0% | |
TACTAGTTCGAAAAGACATC+TGG | + | chr3.2:15959233-15959252 | MS.gene83824:intron | 35.0% | |
TCCGATAAGTACAACTCATA+TGG | + | chr3.2:15958732-15958751 | MS.gene83824:intron | 35.0% | |
! | AACTTTTGTCCCCAAAAAAC+AGG | - | chr3.2:15959474-15959493 | None:intergenic | 35.0% |
!! | AGGCTTTTAAGTAGGCTAAA+AGG | + | chr3.2:15958956-15958975 | MS.gene83824:intron | 35.0% |
AAGAGTGACATGGTTGTCAT+CGG | + | chr3.2:15959377-15959396 | MS.gene83824:intron | 40.0% | |
ACCTCGACAACATTATCTTC+AGG | - | chr3.2:15959840-15959859 | None:intergenic | 40.0% | |
ACTCATATGGTAAAAGGCTG+AGG | + | chr3.2:15958745-15958764 | MS.gene83824:intron | 40.0% | |
CATTTGATATGCTGAGATGC+GGG | + | chr3.2:15958771-15958790 | MS.gene83824:intron | 40.0% | |
CGTTAAACTCCTCACAAGAA+TGG | + | chr3.2:15959596-15959615 | MS.gene83824:CDS | 40.0% | |
CTCATATGGTAAAAGGCTGA+GGG | + | chr3.2:15958746-15958765 | MS.gene83824:intron | 40.0% | |
CTCTCAAAAGCAGAAGAACT+CGG | + | chr3.2:15959717-15959736 | MS.gene83824:CDS | 40.0% | |
CTCTGTCTTAATGAGTGAGA+CGG | + | chr3.2:15959198-15959217 | MS.gene83824:intron | 40.0% | |
GAAGATAATGTTGTCGAGGT+TGG | + | chr3.2:15959840-15959859 | MS.gene83824:CDS | 40.0% | |
GATCAAGCTGTTACTACAGA+TGG | - | chr3.2:15958255-15958274 | None:intergenic | 40.0% | |
GATGATATGGTATATGGCCT+AGG | + | chr3.2:15958633-15958652 | MS.gene83824:intron | 40.0% | |
GCATCATGTAAATTCTACGG+TGG | + | chr3.2:15959082-15959101 | MS.gene83824:intron | 40.0% | |
TAAGTTGCTCCATTCTTGTG+AGG | - | chr3.2:15959608-15959627 | None:intergenic | 40.0% | |
TAGCGATAATCCTGCTTTCT+CGG | - | chr3.2:15959673-15959692 | None:intergenic | 40.0% | |
TCATATGGTAAAAGGCTGAG+GGG | + | chr3.2:15958747-15958766 | MS.gene83824:intron | 40.0% | |
TCCTGAAGATAATGTTGTCG+AGG | + | chr3.2:15959836-15959855 | MS.gene83824:CDS | 40.0% | |
TTCAACTGTATTCCCACTTG+GGG | + | chr3.2:15959539-15959558 | MS.gene83824:CDS | 40.0% | |
TTCTACTTCCAAGAGTGACA+TGG | + | chr3.2:15959367-15959386 | MS.gene83824:intron | 40.0% | |
TTTGTGTTGAAGGAGGAGAA+TGG | - | chr3.2:15958280-15958299 | None:intergenic | 40.0% | |
! | GGTTGTCATCGGTATTTCTA+CGG | + | chr3.2:15959388-15959407 | MS.gene83824:intron | 40.0% |
! | GTTTTGTCGCTGGAATCTTT+AGG | + | chr3.2:15958841-15958860 | MS.gene83824:intron | 40.0% |
! | TCACACTTTCTCACCTTTTC+TGG | + | chr3.2:15958304-15958323 | MS.gene83824:CDS | 40.0% |
! | TTTCAAGTGTTAATCCACCG+TGG | - | chr3.2:15959125-15959144 | None:intergenic | 40.0% |
!! | ACCTTTTCTGGTCAAATCCA+TGG | + | chr3.2:15958316-15958335 | MS.gene83824:CDS | 40.0% |
!! | CAAAAAACAGGCTGGTTCTA+CGG | - | chr3.2:15959462-15959481 | None:intergenic | 40.0% |
!! | GTGTGAGAGTTTTGTGTTGA+AGG | - | chr3.2:15958290-15958309 | None:intergenic | 40.0% |
!! | TGAGAGTTTTGTGTTGAAGG+AGG | - | chr3.2:15958287-15958306 | None:intergenic | 40.0% |
!!! | CTACGGTAATTTTCAAGTGG+TGG | + | chr3.2:15959405-15959424 | MS.gene83824:intron | 40.0% |
!!! | GCTACAGTTTTAGAGACAGA+AGG | - | chr3.2:15958359-15958378 | None:intergenic | 40.0% |
!!! | GTAGAACCAGCCTGTTTTTT+GGG | + | chr3.2:15959461-15959480 | MS.gene83824:intron | 40.0% |
!!! | GTTTTAGAGACAGAAGGAAC+TGG | - | chr3.2:15958353-15958372 | None:intergenic | 40.0% |
!!! | TAGAACCAGCCTGTTTTTTG+GGG | + | chr3.2:15959462-15959481 | MS.gene83824:intron | 40.0% |
AAGAGTGATCCTGGAGTTGA+TGG | - | chr3.2:15959765-15959784 | None:intergenic | 45.0% | |
AGAGACAGAAGGAACTGGTT+TGG | - | chr3.2:15958348-15958367 | None:intergenic | 45.0% | |
ATTACAGGCTGTGGTTGCTT+TGG | + | chr3.2:15959863-15959882 | MS.gene83824:CDS | 45.0% | |
CGACAAAACTCACACTCACA+CGG | - | chr3.2:15958830-15958849 | None:intergenic | 45.0% | |
CGTCTCACTCATTAAGACAG+AGG | - | chr3.2:15959200-15959219 | None:intergenic | 45.0% | |
GATGACAACCATGTCACTCT+TGG | - | chr3.2:15959378-15959397 | None:intergenic | 45.0% | |
GCCATGGATTTGACCAGAAA+AGG | - | chr3.2:15958320-15958339 | None:intergenic | 45.0% | |
GTTACTACAGATGGATGCTG+AGG | - | chr3.2:15958246-15958265 | None:intergenic | 45.0% | |
TAAACCTGCTTTCTCTGCCT+TGG | - | chr3.2:15959640-15959659 | None:intergenic | 45.0% | |
TGTTGTCGAGGTTGGATTAC+AGG | + | chr3.2:15959848-15959867 | MS.gene83824:CDS | 45.0% | |
TTAACCAAGGCAGAGAAAGC+AGG | + | chr3.2:15959633-15959652 | MS.gene83824:CDS | 45.0% | |
TTTGTCCCCAAAAAACAGGC+TGG | - | chr3.2:15959470-15959489 | None:intergenic | 45.0% | |
! | ACACGGACGAAGTGTTAAGT+AGG | - | chr3.2:15958813-15958832 | None:intergenic | 45.0% |
! | CACGGACGAAGTGTTAAGTA+GGG | - | chr3.2:15958812-15958831 | None:intergenic | 45.0% |
! | GAGACAGAAGGAACTGGTTT+GGG | - | chr3.2:15958347-15958366 | None:intergenic | 45.0% |
! | GTTGCTTTGGTCTGTGTTGT+TGG | + | chr3.2:15959876-15959895 | MS.gene83824:CDS | 45.0% |
!! | CGAGTTCTTCTGCTTTTGAG+AGG | - | chr3.2:15959719-15959738 | None:intergenic | 45.0% |
!!! | CGTAGAACCAGCCTGTTTTT+TGG | + | chr3.2:15959460-15959479 | MS.gene83824:intron | 45.0% |
AAATTCTACGGTGGTCCACC+TGG | + | chr3.2:15959091-15959110 | MS.gene83824:intron | 50.0% | |
CGATAATCCTGCTTTCTCGG+CGG | - | chr3.2:15959670-15959689 | None:intergenic | 50.0% | |
CTGAGTGTGAAGAGTGATCC+TGG | - | chr3.2:15959774-15959793 | None:intergenic | 50.0% | |
GCTACTGATCCATCAACTCC+AGG | + | chr3.2:15959753-15959772 | MS.gene83824:CDS | 50.0% | |
GTCGATGTTACAGCACTCCT+AGG | - | chr3.2:15959570-15959589 | None:intergenic | 50.0% | |
TCCTAGGTTGTTCCCCAAGT+GGG | - | chr3.2:15959554-15959573 | None:intergenic | 50.0% | |
! | GCTTTGGTCTGTGTTGTTGG+TGG | + | chr3.2:15959879-15959898 | MS.gene83824:CDS | 50.0% |
!! | AACTGGTTTGGGAGTAGCCA+TGG | - | chr3.2:15958336-15958355 | None:intergenic | 50.0% |
!! | GTGAGTGTGAGTTTTGTCGC+TGG | + | chr3.2:15958831-15958850 | MS.gene83824:intron | 50.0% |
!! | TGTGTTGTTGGTGGTTCTGC+TGG | + | chr3.2:15959888-15959907 | MS.gene83824:CDS | 50.0% |
CGAGGTTGGATTACAGGCTG+TGG | + | chr3.2:15959854-15959873 | MS.gene83824:CDS | 55.0% | |
CTCCTAGGTTGTTCCCCAAG+TGG | - | chr3.2:15959555-15959574 | None:intergenic | 55.0% | |
GAGTGAGACGGTGACTCGAT+TGG | + | chr3.2:15959210-15959229 | MS.gene83824:intron | 55.0% | |
TCCACCTGGATAGGTGTCCA+CGG | + | chr3.2:15959105-15959124 | MS.gene83824:intron | 55.0% | |
TCCCACTTGGGGAACAACCT+AGG | + | chr3.2:15959550-15959569 | MS.gene83824:CDS | 55.0% | |
TTATCAGCCGCCGAGAAAGC+AGG | + | chr3.2:15959660-15959679 | MS.gene83824:CDS | 55.0% | |
!!! | GGTGGTTCTGCTGGTTTTGC+TGG | + | chr3.2:15959897-15959916 | MS.gene83824:CDS | 55.0% |
ACCGTGGACACCTATCCAGG+TGG | - | chr3.2:15959109-15959128 | None:intergenic | 60.0% | |
ACCTGGATAGGTGTCCACGG+TGG | + | chr3.2:15959108-15959127 | MS.gene83824:intron | 60.0% | |
CTACGGTGGTCCACCTGGAT+AGG | + | chr3.2:15959096-15959115 | MS.gene83824:intron | 60.0% | |
TCCACCGTGGACACCTATCC+AGG | - | chr3.2:15959112-15959131 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 15958224 | 15959956 | 15958224 | ID=MS.gene83824 |
chr3.2 | mRNA | 15958224 | 15959956 | 15958224 | ID=MS.gene83824.t1;Parent=MS.gene83824 |
chr3.2 | exon | 15958224 | 15958388 | 15958224 | ID=MS.gene83824.t1.exon1;Parent=MS.gene83824.t1 |
chr3.2 | CDS | 15958224 | 15958388 | 15958224 | ID=cds.MS.gene83824.t1;Parent=MS.gene83824.t1 |
chr3.2 | exon | 15959537 | 15959956 | 15959537 | ID=MS.gene83824.t1.exon2;Parent=MS.gene83824.t1 |
chr3.2 | CDS | 15959537 | 15959956 | 15959537 | ID=cds.MS.gene83824.t1;Parent=MS.gene83824.t1 |
Gene Sequence |
Protein sequence |