Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659150 | KYP58465.1 | 100.000 | 136 | 0 | 0 | 1 | 136 | 5 | 140 | 1.76e-92 | 273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659150 | sp|P68428|H32_WHEAT | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 5.15e-95 | 272 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0659150 | 0.812769 | 3.588763e-51 | -8.615850e-47 |
| Msa0018920 | Msa0659150 | 0.813959 | 1.965437e-51 | -8.615850e-47 |
| Msa0019930 | Msa0659150 | 0.822367 | 2.461008e-53 | -8.615850e-47 |
| Msa0027280 | Msa0659150 | 0.827885 | 1.221671e-54 | -8.615850e-47 |
| Msa0030070 | Msa0659150 | 0.820881 | 5.426130e-53 | -8.615850e-47 |
| Msa0030690 | Msa0659150 | 0.810836 | 9.454740e-51 | -8.615850e-47 |
| Msa0032980 | Msa0659150 | 0.823198 | 1.576265e-53 | -8.615850e-47 |
| Msa0034830 | Msa0659150 | 0.807615 | 4.635718e-50 | -8.615850e-47 |
| Msa0035140 | Msa0659150 | 0.837058 | 6.504021e-57 | -8.615850e-47 |
| Msa0037740 | Msa0659150 | 0.805759 | 1.142961e-49 | -8.615850e-47 |
| Msa0050150 | Msa0659150 | 0.812920 | 3.325302e-51 | -8.615850e-47 |
| Msa0053070 | Msa0659150 | 0.815361 | 9.615922e-52 | -8.615850e-47 |
| Msa0056180 | Msa0659150 | 0.830767 | 2.439386e-55 | -8.615850e-47 |
| Msa0062340 | Msa0659150 | 0.810278 | 1.248052e-50 | -8.615850e-47 |
| Msa0067060 | Msa0659150 | 0.838383 | 2.971910e-57 | -8.615850e-47 |
| Msa0068150 | Msa0659150 | 0.838285 | 3.149432e-57 | -8.615850e-47 |
| Msa0073120 | Msa0659150 | 0.803876 | 2.828276e-49 | -8.615850e-47 |
| Msa0077560 | Msa0659150 | 0.806668 | 7.355895e-50 | -8.615850e-47 |
| Msa0091350 | Msa0659150 | 0.827532 | 1.485319e-54 | -8.615850e-47 |
| Msa0091360 | Msa0659150 | 0.826991 | 2.002227e-54 | -8.615850e-47 |
| Msa0098410 | Msa0659150 | 0.818418 | 1.980312e-52 | -8.615850e-47 |
| Msa0112670 | Msa0659150 | 0.840353 | 9.154173e-58 | -8.615850e-47 |
| Msa0115550 | Msa0659150 | 0.839692 | 1.361071e-57 | -8.615850e-47 |
| Msa0603410 | Msa0659150 | 0.811958 | 5.395449e-51 | -8.615850e-47 |
| Msa0603980 | Msa0659150 | 0.828014 | 1.137336e-54 | -8.615850e-47 |
| Msa0606100 | Msa0659150 | 0.822894 | 1.855348e-53 | -8.615850e-47 |
| Msa0607330 | Msa0659150 | 0.807797 | 4.239913e-50 | -8.615850e-47 |
| Msa0607800 | Msa0659150 | 0.822384 | 2.438497e-53 | -8.615850e-47 |
| Msa0613630 | Msa0659150 | 0.801307 | 9.577123e-49 | -8.615850e-47 |
| Msa0615630 | Msa0659150 | 0.833185 | 6.167824e-56 | -8.615850e-47 |
| Msa0620500 | Msa0659150 | 0.834993 | 2.173467e-56 | -8.615850e-47 |
| Msa0621710 | Msa0659150 | 0.831433 | 1.674065e-55 | -8.615850e-47 |
| Msa0622920 | Msa0659150 | 0.814019 | 1.906863e-51 | -8.615850e-47 |
| Msa0625620 | Msa0659150 | 0.842008 | 3.361041e-58 | -8.615850e-47 |
| Msa0630660 | Msa0659150 | 0.811734 | 6.037993e-51 | -8.615850e-47 |
| Msa0645340 | Msa0659150 | 0.804355 | 2.248087e-49 | -8.615850e-47 |
| Msa0647050 | Msa0659150 | 0.850641 | 1.488952e-60 | -8.615850e-47 |
| Msa0648040 | Msa0659150 | 0.822116 | 2.812861e-53 | -8.615850e-47 |
| Msa0648760 | Msa0659150 | 0.820064 | 8.355612e-53 | -8.615850e-47 |
| Msa0657700 | Msa0659150 | 0.801607 | 8.313942e-49 | -8.615850e-47 |
| Msa0658640 | Msa0659150 | 0.806980 | 6.319139e-50 | -8.615850e-47 |
| Msa0659150 | Msa0659200 | 0.844222 | 8.640533e-59 | -8.615850e-47 |
| Msa0659150 | Msa0666700 | 0.836641 | 8.309445e-57 | -8.615850e-47 |
| Msa0659150 | Msa0668900 | 0.835722 | 1.421709e-56 | -8.615850e-47 |
| Msa0659150 | Msa0687090 | 0.800855 | 1.184935e-48 | -8.615850e-47 |
| Msa0659150 | Msa0690320 | 0.804100 | 2.540785e-49 | -8.615850e-47 |
| Msa0659150 | Msa0690740 | 0.824317 | 8.618303e-54 | -8.615850e-47 |
| Msa0659150 | Msa0691270 | 0.803785 | 2.954206e-49 | -8.615850e-47 |
| Msa0659150 | Msa0698730 | 0.860580 | 1.870289e-63 | -8.615850e-47 |
| Msa0659150 | Msa0703600 | 0.815515 | 8.885570e-52 | -8.615850e-47 |
| Msa0659150 | Msa0709200 | 0.817763 | 2.785765e-52 | -8.615850e-47 |
| Msa0659150 | Msa0709440 | 0.823195 | 1.578795e-53 | -8.615850e-47 |
| Msa0659150 | Msa0711010 | 0.804871 | 1.754474e-49 | -8.615850e-47 |
| Msa0659150 | Msa0713920 | 0.810726 | 9.989536e-51 | -8.615850e-47 |
| Msa0659150 | Msa0714520 | 0.819990 | 8.689762e-53 | -8.615850e-47 |
| Msa0659150 | Msa0716480 | 0.832343 | 9.978640e-56 | -8.615850e-47 |
| Msa0659150 | Msa0717900 | 0.843409 | 1.425976e-58 | -8.615850e-47 |
| Msa0659150 | Msa0718040 | 0.838565 | 2.666178e-57 | -8.615850e-47 |
| Msa0659150 | Msa0720280 | 0.824718 | 6.932947e-54 | -8.615850e-47 |
| Msa0659150 | Msa0730930 | 0.801091 | 1.060300e-48 | -8.615850e-47 |
| Msa0659150 | Msa0735780 | 0.852562 | 4.255788e-61 | -8.615850e-47 |
| Msa0659150 | Msa0737020 | 0.819078 | 1.402972e-52 | -8.615850e-47 |
| Msa0659150 | Msa0740710 | 0.860952 | 1.442444e-63 | -8.615850e-47 |
| Msa0659150 | Msa0743440 | 0.813958 | 1.966893e-51 | -8.615850e-47 |
| Msa0659150 | Msa0747740 | 0.828103 | 1.082957e-54 | -8.615850e-47 |
| Msa0659150 | Msa0758590 | 0.816998 | 4.141956e-52 | -8.615850e-47 |
| Msa0659150 | Msa0758650 | 0.807235 | 5.580627e-50 | -8.615850e-47 |
| Msa0659150 | Msa0778600 | 0.836061 | 1.166705e-56 | -8.615850e-47 |
| Msa0659150 | Msa0780910 | 0.854786 | 9.759606e-62 | -8.615850e-47 |
| Msa0659150 | Msa0800660 | 0.824796 | 6.646447e-54 | -8.615850e-47 |
| Msa0659150 | Msa0803140 | 0.828458 | 8.892983e-55 | -8.615850e-47 |
| Msa0659150 | Msa0816080 | 0.824198 | 9.191697e-54 | -8.615850e-47 |
| Msa0659150 | Msa0821160 | 0.849017 | 4.234653e-60 | -8.615850e-47 |
| Msa0659150 | Msa0837460 | 0.834050 | 3.750011e-56 | -8.615850e-47 |
| Msa0659150 | Msa0841500 | 0.830069 | 3.614244e-55 | -8.615850e-47 |
| Msa0659150 | Msa0851300 | 0.844047 | 9.624814e-59 | -8.615850e-47 |
| Msa0659150 | Msa0879920 | 0.809104 | 2.231567e-50 | -8.615850e-47 |
| Msa0659150 | Msa0888790 | 0.801670 | 8.069778e-49 | -8.615850e-47 |
| Msa0659150 | Msa0900090 | 0.804005 | 2.657964e-49 | -8.615850e-47 |
| Msa0659150 | Msa0901120 | 0.806799 | 6.902311e-50 | -8.615850e-47 |
| Msa0659150 | Msa0909760 | 0.860334 | 2.221505e-63 | -8.615850e-47 |
| Msa0659150 | Msa0915520 | 0.810224 | 1.281999e-50 | -8.615850e-47 |
| Msa0659150 | Msa0931590 | 0.816799 | 4.590750e-52 | -8.615850e-47 |
| Msa0659150 | Msa0960770 | 0.829916 | 3.938461e-55 | -8.615850e-47 |
| Msa0659150 | Msa0980990 | 0.801781 | 7.656258e-49 | -8.615850e-47 |
| Msa0659150 | Msa1002640 | 0.822732 | 2.023783e-53 | -8.615850e-47 |
| Msa0659150 | Msa1008670 | 0.864141 | 1.505446e-64 | -8.615850e-47 |
| Msa0659150 | Msa1008680 | 0.849654 | 2.815258e-60 | -8.615850e-47 |
| Msa0659150 | Msa1033920 | 0.852774 | 3.702960e-61 | -8.615850e-47 |
| Msa0659150 | Msa1035220 | 0.801583 | 8.408616e-49 | -8.615850e-47 |
| Msa0659150 | Msa1035650 | 0.842453 | 2.562023e-58 | -8.615850e-47 |
| Msa0659150 | Msa1037540 | 0.806936 | 6.455992e-50 | -8.615850e-47 |
| Msa0659150 | Msa1060900 | 0.832456 | 9.354196e-56 | -8.615850e-47 |
| Msa0659150 | Msa1076020 | 0.824775 | 6.723107e-54 | -8.615850e-47 |
| Msa0659150 | Msa1081390 | 0.815769 | 7.801022e-52 | -8.615850e-47 |
| Msa0659150 | Msa1082200 | 0.819621 | 1.054991e-52 | -8.615850e-47 |
| Msa0659150 | Msa1082380 | 0.837409 | 5.286178e-57 | -8.615850e-47 |
| Msa0659150 | Msa1084530 | 0.819641 | 1.043954e-52 | -8.615850e-47 |
| Msa0659150 | Msa1090140 | 0.827590 | 1.438086e-54 | -8.615850e-47 |
| Msa0659150 | Msa1114630 | 0.800730 | 1.256424e-48 | -8.615850e-47 |
| Msa0659150 | Msa1116190 | 0.847480 | 1.125863e-59 | -8.615850e-47 |
| Msa0659150 | Msa1116220 | 0.819780 | 9.704265e-53 | -8.615850e-47 |
| Msa0659150 | Msa1116660 | 0.861817 | 7.858649e-64 | -8.615850e-47 |
| Msa0659150 | Msa1116740 | 0.842678 | 2.232823e-58 | -8.615850e-47 |
| Msa0659150 | Msa1125820 | 0.824523 | 7.708053e-54 | -8.615850e-47 |
| Msa0659150 | Msa1125990 | 0.825690 | 4.085364e-54 | -8.615850e-47 |
| Msa0659150 | Msa1127280 | 0.824547 | 7.610229e-54 | -8.615850e-47 |
| Msa0659150 | Msa1130420 | 0.816474 | 5.428154e-52 | -8.615850e-47 |
| Msa0659150 | Msa1132530 | 0.832424 | 9.529309e-56 | -8.615850e-47 |
| Msa0659150 | Msa1139050 | 0.819804 | 9.581325e-53 | -8.615850e-47 |
| Msa0659150 | Msa1148630 | 0.824134 | 9.517548e-54 | -8.615850e-47 |
| Msa0659150 | Msa1149450 | 0.807670 | 4.511783e-50 | -8.615850e-47 |
| Msa0659150 | Msa1159590 | 0.813625 | 2.327722e-51 | -8.615850e-47 |
| Msa0659150 | Msa1162880 | 0.872972 | 2.108448e-67 | -8.615850e-47 |
| Msa0659150 | Msa1163180 | 0.812904 | 3.351665e-51 | -8.615850e-47 |
| Msa0659150 | Msa1165480 | 0.832766 | 7.839743e-56 | -8.615850e-47 |
| Msa0659150 | Msa1171070 | 0.813838 | 2.090083e-51 | -8.615850e-47 |
| Msa0659150 | Msa1171290 | 0.815828 | 7.570251e-52 | -8.615850e-47 |
| Msa0659150 | Msa1190390 | 0.838488 | 2.791655e-57 | -8.615850e-47 |
| Msa0659150 | Msa1213830 | 0.810855 | 9.364409e-51 | -8.615850e-47 |
| Msa0659150 | Msa1214350 | 0.851523 | 8.395452e-61 | -8.615850e-47 |
| Msa0659150 | Msa1215980 | 0.833771 | 4.403694e-56 | -8.615850e-47 |
| Msa0659150 | Msa1218820 | 0.816243 | 6.113358e-52 | -8.615850e-47 |
| Msa0659150 | Msa1219770 | 0.821342 | 4.248212e-53 | -8.615850e-47 |
| Msa0659150 | Msa1226520 | 0.807501 | 4.900742e-50 | -8.615850e-47 |
| Msa0659150 | Msa1244240 | 0.840740 | 7.246279e-58 | -8.615850e-47 |
| Msa0659150 | Msa1254420 | 0.810455 | 1.142757e-50 | -8.615850e-47 |
| Msa0659150 | Msa1254540 | 0.860756 | 1.653970e-63 | -8.615850e-47 |
| Msa0659150 | Msa1263740 | 0.813394 | 2.616546e-51 | -8.615850e-47 |
| Msa0659150 | Msa1263780 | 0.849957 | 2.316661e-60 | -8.615850e-47 |
| Msa0659150 | Msa1266690 | 0.809319 | 2.006395e-50 | -8.615850e-47 |
| Msa0659150 | Msa1294460 | 0.831602 | 1.520916e-55 | -8.615850e-47 |
| Msa0659150 | Msa1294790 | 0.815263 | 1.010936e-51 | -8.615850e-47 |
| Msa0659150 | Msa1300460 | 0.811700 | 6.140711e-51 | -8.615850e-47 |
| Msa0659150 | Msa1301820 | 0.800639 | 1.311290e-48 | -8.615850e-47 |
| Msa0659150 | Msa1305780 | 0.861321 | 1.113498e-63 | -8.615850e-47 |
| Msa0659150 | Msa1306570 | 0.820931 | 5.284428e-53 | -8.615850e-47 |
| Msa0659150 | Msa1332950 | 0.823347 | 1.454498e-53 | -8.615850e-47 |
| Msa0659150 | Msa1333360 | 0.804833 | 1.786445e-49 | -8.615850e-47 |
| Msa0659150 | Msa1338210 | 0.807864 | 4.103143e-50 | -8.615850e-47 |
| Msa0659150 | Msa1339170 | 0.838305 | 3.111297e-57 | -8.615850e-47 |
| Msa0659150 | Msa1339230 | 0.802877 | 4.554986e-49 | -8.615850e-47 |
| Msa0659150 | Msa1343180 | 0.829194 | 5.899613e-55 | -8.615850e-47 |
| Msa0659150 | Msa1361930 | 0.826179 | 3.127073e-54 | -8.615850e-47 |
| Msa0659150 | Msa1364040 | 0.812852 | 3.441584e-51 | -8.615850e-47 |
| Msa0659150 | Msa1364410 | 0.849112 | 3.985578e-60 | -8.615850e-47 |
| Msa0659150 | Msa1368750 | 0.838318 | 3.088504e-57 | -8.615850e-47 |
| Msa0659150 | Msa1374790 | 0.844543 | 7.085040e-59 | -8.615850e-47 |
| Msa0659150 | Msa1375350 | 0.826501 | 2.620827e-54 | -8.615850e-47 |
| Msa0659150 | Msa1381470 | 0.801656 | 8.122124e-49 | -8.615850e-47 |
| Msa0659150 | Msa1387440 | 0.807931 | 3.971088e-50 | -8.615850e-47 |
| Msa0659150 | Msa1387500 | 0.848423 | 6.187001e-60 | -8.615850e-47 |
| Msa0659150 | Msa1393560 | 0.821326 | 4.286167e-53 | -8.615850e-47 |
| Msa0659150 | Msa1399460 | 0.817535 | 3.136529e-52 | -8.615850e-47 |
| Msa0659150 | Msa1406720 | 0.810468 | 1.135829e-50 | -8.615850e-47 |
| Msa0659150 | Msa1410190 | 0.814093 | 1.836226e-51 | -8.615850e-47 |
| Msa0659150 | Msa1417060 | 0.800136 | 1.660218e-48 | -8.615850e-47 |
| Msa0659150 | Msa1426110 | 0.811940 | 5.443411e-51 | -8.615850e-47 |
| Msa0659150 | Msa1426320 | 0.828000 | 1.146352e-54 | -8.615850e-47 |
| Msa0659150 | Msa1434640 | 0.816054 | 6.737475e-52 | -8.615850e-47 |
| Msa0659150 | Msa1435100 | 0.809293 | 2.032700e-50 | -8.615850e-47 |
| Msa0659150 | Msa1439730 | 0.805678 | 1.189017e-49 | -8.615850e-47 |
| Msa0659150 | Msa1442260 | 0.856389 | 3.326592e-62 | -8.615850e-47 |
| Msa0659150 | Msa1446100 | 0.820706 | 5.952296e-53 | -8.615850e-47 |
| Msa0659150 | Msa1447170 | 0.835028 | 2.129786e-56 | -8.615850e-47 |
| Msa0659150 | Msa1450190 | 0.821504 | 3.899207e-53 | -8.615850e-47 |
| Msa0659150 | Msa1451820 | 0.842556 | 2.405476e-58 | -8.615850e-47 |
| Msa0659150 | Msa1454010 | 0.847303 | 1.259670e-59 | -8.615850e-47 |
| Msa0122330 | Msa0659150 | 0.815804 | 7.663842e-52 | -8.615850e-47 |
| Msa0123070 | Msa0659150 | 0.819867 | 9.270948e-53 | -8.615850e-47 |
| Msa0125590 | Msa0659150 | 0.822685 | 2.075773e-53 | -8.615850e-47 |
| Msa0127340 | Msa0659150 | 0.816736 | 4.742139e-52 | -8.615850e-47 |
| Msa0127680 | Msa0659150 | 0.856821 | 2.483215e-62 | -8.615850e-47 |
| Msa0140380 | Msa0659150 | 0.812281 | 4.588042e-51 | -8.615850e-47 |
| Msa0141640 | Msa0659150 | 0.833550 | 5.000455e-56 | -8.615850e-47 |
| Msa0156050 | Msa0659150 | 0.824351 | 8.460272e-54 | -8.615850e-47 |
| Msa0156090 | Msa0659150 | 0.812815 | 3.507037e-51 | -8.615850e-47 |
| Msa0158900 | Msa0659150 | 0.808033 | 3.777625e-50 | -8.615850e-47 |
| Msa0159590 | Msa0659150 | 0.826788 | 2.238801e-54 | -8.615850e-47 |
| Msa0165830 | Msa0659150 | 0.817588 | 3.050302e-52 | -8.615850e-47 |
| Msa0170070 | Msa0659150 | 0.831449 | 1.659250e-55 | -8.615850e-47 |
| Msa0172510 | Msa0659150 | 0.835539 | 1.582571e-56 | -8.615850e-47 |
| Msa0190570 | Msa0659150 | 0.800476 | 1.415610e-48 | -8.615850e-47 |
| Msa0190730 | Msa0659150 | 0.841652 | 4.172764e-58 | -8.615850e-47 |
| Msa0194630 | Msa0659150 | 0.827608 | 1.424412e-54 | -8.615850e-47 |
| Msa0200050 | Msa0659150 | 0.804169 | 2.457603e-49 | -8.615850e-47 |
| Msa0233020 | Msa0659150 | 0.854735 | 1.009874e-61 | -8.615850e-47 |
| Msa0367150 | Msa0659150 | 0.801055 | 1.078624e-48 | -8.615850e-47 |
| Msa0367520 | Msa0659150 | 0.815916 | 7.234309e-52 | -8.615850e-47 |
| Msa0368860 | Msa0659150 | 0.800881 | 1.170253e-48 | -8.615850e-47 |
| Msa0373170 | Msa0659150 | 0.830246 | 3.272232e-55 | -8.615850e-47 |
| Msa0373500 | Msa0659150 | 0.845002 | 5.328615e-59 | -8.615850e-47 |
| Msa0377710 | Msa0659150 | 0.814086 | 1.842302e-51 | -8.615850e-47 |
| Msa0380490 | Msa0659150 | 0.807781 | 4.275013e-50 | -8.615850e-47 |
| Msa0382230 | Msa0659150 | 0.806629 | 7.497242e-50 | -8.615850e-47 |
| Msa0383000 | Msa0659150 | 0.822534 | 2.250345e-53 | -8.615850e-47 |
| Msa0409830 | Msa0659150 | 0.817337 | 3.474718e-52 | -8.615850e-47 |
| Msa0412130 | Msa0659150 | 0.836397 | 9.586960e-57 | -8.615850e-47 |
| Msa0416160 | Msa0659150 | 0.803833 | 2.886669e-49 | -8.615850e-47 |
| Msa0421130 | Msa0659150 | 0.815063 | 1.119931e-51 | -8.615850e-47 |
| Msa0421750 | Msa0659150 | 0.820656 | 6.113098e-53 | -8.615850e-47 |
| Msa0422050 | Msa0659150 | 0.866069 | 3.731782e-65 | -8.615850e-47 |
| Msa0432010 | Msa0659150 | 0.842570 | 2.386082e-58 | -8.615850e-47 |
| Msa0433150 | Msa0659150 | 0.802669 | 5.027173e-49 | -8.615850e-47 |
| Msa0456670 | Msa0659150 | 0.842804 | 2.067809e-58 | -8.615850e-47 |
| Msa0462780 | Msa0659150 | 0.814676 | 1.364385e-51 | -8.615850e-47 |
| Msa0466520 | Msa0659150 | 0.806075 | 9.809691e-50 | -8.615850e-47 |
| Msa0466880 | Msa0659150 | 0.813795 | 2.135839e-51 | -8.615850e-47 |
| Msa0467690 | Msa0659150 | 0.826051 | 3.353759e-54 | -8.615850e-47 |
| Msa0468620 | Msa0659150 | 0.829595 | 4.713439e-55 | -8.615850e-47 |
| Msa0468700 | Msa0659150 | 0.846847 | 1.678946e-59 | -8.615850e-47 |
| Msa0480730 | Msa0659150 | 0.800619 | 1.323569e-48 | -8.615850e-47 |
| Msa0481890 | Msa0659150 | 0.821521 | 3.863788e-53 | -8.615850e-47 |
| Msa0272260 | Msa0659150 | 0.845234 | 4.611843e-59 | -8.615850e-47 |
| Msa0495550 | Msa0659150 | 0.809165 | 2.165058e-50 | -8.615850e-47 |
| Msa0507020 | Msa0659150 | 0.809116 | 2.217837e-50 | -8.615850e-47 |
| Msa0507810 | Msa0659150 | 0.812139 | 4.926071e-51 | -8.615850e-47 |
| Msa0507920 | Msa0659150 | 0.828783 | 7.421057e-55 | -8.615850e-47 |
| Msa0512530 | Msa0659150 | 0.808914 | 2.450634e-50 | -8.615850e-47 |
| Msa0513080 | Msa0659150 | 0.801771 | 7.693276e-49 | -8.615850e-47 |
| Msa0514020 | Msa0659150 | 0.815795 | 7.698224e-52 | -8.615850e-47 |
| Msa0514500 | Msa0659150 | 0.827651 | 1.390523e-54 | -8.615850e-47 |
| Msa0514580 | Msa0659150 | 0.842675 | 2.237665e-58 | -8.615850e-47 |
| Msa0520680 | Msa0659150 | 0.800223 | 1.594402e-48 | -8.615850e-47 |
| Msa0520870 | Msa0659150 | 0.849433 | 3.243528e-60 | -8.615850e-47 |
| Msa0521680 | Msa0659150 | 0.814491 | 1.499798e-51 | -8.615850e-47 |
| Msa0531960 | Msa0659150 | 0.861152 | 1.253912e-63 | -8.615850e-47 |
| Msa0534100 | Msa0659150 | 0.814010 | 1.915050e-51 | -8.615850e-47 |
| Msa0548000 | Msa0659150 | 0.809200 | 2.128337e-50 | -8.615850e-47 |
| Msa0550590 | Msa0659150 | 0.857028 | 2.157180e-62 | -8.615850e-47 |
| Msa0554300 | Msa0659150 | 0.825758 | 3.935666e-54 | -8.615850e-47 |
| Msa0561560 | Msa0659150 | 0.835112 | 2.027868e-56 | -8.615850e-47 |
| Msa0563900 | Msa0659150 | 0.800059 | 1.721433e-48 | -8.615850e-47 |
| Msa0567170 | Msa0659150 | 0.808313 | 3.293378e-50 | -8.615850e-47 |
| Msa0571620 | Msa0659150 | 0.807908 | 4.016997e-50 | -8.615850e-47 |
| Msa0577280 | Msa0659150 | 0.816653 | 4.950541e-52 | -8.615850e-47 |
| Msa0577330 | Msa0659150 | 0.815442 | 9.227484e-52 | -8.615850e-47 |
| Msa0580200 | Msa0659150 | 0.820488 | 6.678949e-53 | -8.615850e-47 |
| Msa0585340 | Msa0659150 | 0.804690 | 1.913614e-49 | -8.615850e-47 |
| Msa0586200 | Msa0659150 | 0.804889 | 1.739543e-49 | -8.615850e-47 |
| Msa0588920 | Msa0659150 | 0.801043 | 1.084479e-48 | -8.615850e-47 |
| Msa0590200 | Msa0659150 | 0.836267 | 1.034220e-56 | -8.615850e-47 |
| Msa0593400 | Msa0659150 | 0.804829 | 1.790559e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659150 | MtrunA17_Chr5g0410931 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr5g0410951 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr8g0383851 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr8g0383781 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr8g0390361 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr2g0295191 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr7g0237661 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr4g0033041 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr7g0218971 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr4g0046301 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr8g0364801 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 3.79e-96 | 272 |
| Msa0659150 | MtrunA17_Chr4g0054161 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0659150 | MtrunA17_Chr8g0363741 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0659150 | MtrunA17_Chr1g0156021 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 2.60e-93 | 265 |
| Msa0659150 | MtrunA17_Chr4g0054151 | 97.059 | 136 | 4 | 0 | 1 | 136 | 4 | 139 | 2.61e-93 | 265 |
| Msa0659150 | MtrunA17_Chr8g0388121 | 96.324 | 136 | 5 | 0 | 1 | 136 | 1 | 136 | 1.09e-92 | 264 |
| Msa0659150 | MtrunA17_Chr2g0319141 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.10e-86 | 248 |
| Msa0659150 | MtrunA17_Chr2g0319151 | 89.706 | 136 | 14 | 0 | 1 | 136 | 1 | 136 | 1.10e-86 | 248 |
| Msa0659150 | MtrunA17_Chr2g0319131 | 85.616 | 146 | 11 | 1 | 1 | 136 | 1 | 146 | 1.38e-82 | 238 |
| Msa0659150 | MtrunA17_Chr2g0319121 | 84.559 | 136 | 19 | 2 | 1 | 135 | 1 | 135 | 5.82e-75 | 219 |
| Msa0659150 | MtrunA17_Chr7g0218961 | 86.607 | 112 | 15 | 0 | 25 | 136 | 2 | 113 | 8.01e-66 | 195 |
| Msa0659150 | MtrunA17_Chr7g0222991 | 67.164 | 134 | 43 | 1 | 1 | 134 | 10 | 142 | 5.47e-56 | 171 |
| Msa0659150 | MtrunA17_Chr5g0407311 | 67.241 | 116 | 35 | 2 | 1 | 116 | 1 | 113 | 1.29e-45 | 144 |
| Msa0659150 | MtrunA17_Chr7g0223001 | 58.647 | 133 | 41 | 3 | 3 | 134 | 27 | 146 | 5.46e-43 | 139 |
| Msa0659150 | MtrunA17_Chr7g0240791 | 100.000 | 66 | 0 | 0 | 1 | 66 | 1 | 66 | 9.61e-41 | 133 |
| Msa0659150 | MtrunA17_Chr8g0347231 | 55.102 | 98 | 43 | 1 | 37 | 133 | 28 | 125 | 3.80e-30 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659150 | AT1G09200.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0659150 | AT5G65360.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0659150 | AT5G10390.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0659150 | AT5G10400.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0659150 | AT3G27360.1 | 99.265 | 136 | 1 | 0 | 1 | 136 | 1 | 136 | 1.62e-95 | 271 |
| Msa0659150 | AT4G40030.3 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT4G40030.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT4G40030.4 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT5G10980.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT4G40040.2 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT4G40040.3 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT4G40040.1 | 97.059 | 136 | 4 | 0 | 1 | 136 | 1 | 136 | 3.59e-93 | 265 |
| Msa0659150 | AT4G40030.2 | 97.059 | 136 | 4 | 0 | 1 | 136 | 29 | 164 | 7.05e-93 | 266 |
| Msa0659150 | AT5G65350.1 | 94.853 | 136 | 7 | 0 | 1 | 136 | 1 | 136 | 5.30e-91 | 260 |
| Msa0659150 | AT1G75600.1 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 1.25e-89 | 256 |
| Msa0659150 | AT1G13370.1 | 93.382 | 136 | 9 | 0 | 1 | 136 | 1 | 136 | 5.55e-89 | 254 |
| Msa0659150 | AT1G19890.1 | 89.781 | 137 | 13 | 1 | 1 | 136 | 1 | 137 | 1.07e-83 | 241 |
| Msa0659150 | AT5G12910.1 | 71.111 | 135 | 34 | 2 | 1 | 135 | 1 | 130 | 9.90e-67 | 198 |
| Msa0659150 | AT1G01370.2 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0659150 | AT1G01370.1 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0659150 | AT1G01370.4 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
| Msa0659150 | AT1G01370.3 | 53.982 | 113 | 49 | 2 | 24 | 134 | 63 | 174 | 2.97e-31 | 110 |
Find 36 sgRNAs with CRISPR-Local
Find 36 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGGTTGCCAGTTGCTTC+CGG | 0.239809 | 4_3:-69465053 | None:intergenic |
| TTTGGTTGCCAGTTGCTTCC+GGG | 0.293951 | 4_3:-69465052 | None:intergenic |
| TCTCTCAAAGCAACTGTTCC+AGG | 0.333816 | 4_3:-69465132 | None:intergenic |
| ATTCCAGAGCAGTGCTGTTT+CGG | 0.340103 | 4_3:+69465254 | Msa0659150:CDS |
| AGCTGATTTCCGAGCGGCTT+TGG | 0.366844 | 4_3:-69465070 | None:intergenic |
| CAAGGCTCCCCGGAAGCAAC+TGG | 0.376550 | 4_3:+69465044 | Msa0659150:CDS |
| AGAAGCGGCTGAAGCTTACT+TGG | 0.416086 | 4_3:+69465284 | Msa0659150:CDS |
| GAGCCGAAACAGCACTGCTC+TGG | 0.422418 | 4_3:-69465257 | None:intergenic |
| TTCTTCACTCCTCCGGTCGC+CGG | 0.442119 | 4_3:-69465093 | None:intergenic |
| GACGTTGGAATGGAAGTTTA+CGG | 0.458530 | 4_3:-69465191 | None:intergenic |
| AGGCATGATTGTAACTCTCT+TGG | 0.461766 | 4_3:-69465346 | None:intergenic |
| CGGAAATCAGCTCCGGCGAC+CGG | 0.461897 | 4_3:+69465081 | Msa0659150:CDS |
| CTTGCAAGCTGAATGTCCTT+AGG | 0.462646 | 4_3:-69465366 | None:intergenic |
| CCACCGGCGGCAAGGCTCCC+CGG | 0.480154 | 4_3:+69465034 | Msa0659150:CDS |
| TCGCAAGTCCACCGGCGGCA+AGG | 0.488583 | 4_3:+69465026 | Msa0659150:CDS |
| AGCCGCTCGGAAATCAGCTC+CGG | 0.498921 | 4_3:+69465074 | Msa0659150:CDS |
| GTGTGGCTTCTTCACTCCTC+CGG | 0.499925 | 4_3:-69465100 | None:intergenic |
| TTGGTTGCCAGTTGCTTCCG+GGG | 0.522282 | 4_3:-69465051 | None:intergenic |
| CTTCCGGGGAGCCTTGCCGC+CGG | 0.543290 | 4_3:-69465037 | None:intergenic |
| CCGGGGAGCCTTGCCGCCGG+TGG | 0.548377 | 4_3:-69465034 | None:intergenic |
| GGACTTGCGAGCAGTCTGCT+TGG | 0.551577 | 4_3:-69465013 | None:intergenic |
| AACTGGCAACCAAAGCCGCT+CGG | 0.560134 | 4_3:+69465061 | Msa0659150:CDS |
| CAGACTGCTCGCAAGTCCAC+CGG | 0.562052 | 4_3:+69465018 | Msa0659150:CDS |
| GCGGCTGAAGCTTACTTGGT+CGG | 0.565776 | 4_3:+69465288 | Msa0659150:CDS |
| GAGAGTTACAATCATGCCTA+AGG | 0.573275 | 4_3:+69465350 | Msa0659150:CDS |
| AAGAAGAATCAGAGGAGAGA+GGG | 0.573886 | 4_3:+69465386 | Msa0659150:CDS |
| TCACGAACAAGACGTTGGAA+TGG | 0.598115 | 4_3:-69465201 | None:intergenic |
| AAATCAGCTCCGGCGACCGG+AGG | 0.599225 | 4_3:+69465084 | Msa0659150:CDS |
| CAAGAAGAATCAGAGGAGAG+AGG | 0.603703 | 4_3:+69465385 | Msa0659150:CDS |
| CGATTTCACGAACAAGACGT+TGG | 0.613448 | 4_3:-69465206 | None:intergenic |
| CAGCTTGCAAGAAGAATCAG+AGG | 0.621034 | 4_3:+69465378 | Msa0659150:CDS |
| ACTGCTCGCAAGTCCACCGG+CGG | 0.647164 | 4_3:+69465021 | Msa0659150:CDS |
| AAGCCACACAGATTCAGACC+TGG | 0.672238 | 4_3:+69465114 | Msa0659150:CDS |
| TGTTTCGGCTCTTCAAGAAG+CGG | 0.672573 | 4_3:+69465269 | Msa0659150:CDS |
| CGCCGGAGCTGATTTCCGAG+CGG | 0.685230 | 4_3:-69465076 | None:intergenic |
| GTTCCAGGTCTGAATCTGTG+TGG | 0.688220 | 4_3:-69465117 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GACGTTGGAATGGAAGTTTA+CGG | - | chr4_3:69465194-69465213 | None:intergenic | 40.0% | |
| AGGCATGATTGTAACTCTCT+TGG | - | chr4_3:69465349-69465368 | None:intergenic | 40.0% | |
| GAGAGTTACAATCATGCCTA+AGG | + | chr4_3:69465350-69465369 | Msa0659150:CDS | 40.0% | |
| AAGAAGAATCAGAGGAGAGA+GGG | + | chr4_3:69465386-69465405 | Msa0659150:CDS | 40.0% | |
| TCTCTCAAAGCAACTGTTCC+AGG | - | chr4_3:69465135-69465154 | None:intergenic | 45.0% | |
| TCACGAACAAGACGTTGGAA+TGG | - | chr4_3:69465204-69465223 | None:intergenic | 45.0% | |
| CGATTTCACGAACAAGACGT+TGG | - | chr4_3:69465209-69465228 | None:intergenic | 45.0% | |
| !! | ATTCCAGAGCAGTGCTGTTT+CGG | + | chr4_3:69465254-69465273 | Msa0659150:CDS | 45.0% |
| TGTTTCGGCTCTTCAAGAAG+CGG | + | chr4_3:69465269-69465288 | Msa0659150:CDS | 45.0% | |
| CTTGCAAGCTGAATGTCCTT+AGG | - | chr4_3:69465369-69465388 | None:intergenic | 45.0% | |
| CAGCTTGCAAGAAGAATCAG+AGG | + | chr4_3:69465378-69465397 | Msa0659150:CDS | 45.0% | |
| CAAGAAGAATCAGAGGAGAG+AGG | + | chr4_3:69465385-69465404 | Msa0659150:CDS | 45.0% | |
| TTTGGTTGCCAGTTGCTTCC+GGG | - | chr4_3:69465055-69465074 | None:intergenic | 50.0% | |
| CTTTGGTTGCCAGTTGCTTC+CGG | - | chr4_3:69465056-69465075 | None:intergenic | 50.0% | |
| AAGCCACACAGATTCAGACC+TGG | + | chr4_3:69465114-69465133 | Msa0659150:CDS | 50.0% | |
| GTTCCAGGTCTGAATCTGTG+TGG | - | chr4_3:69465120-69465139 | None:intergenic | 50.0% | |
| AGAAGCGGCTGAAGCTTACT+TGG | + | chr4_3:69465284-69465303 | Msa0659150:CDS | 50.0% | |
| TTGGTTGCCAGTTGCTTCCG+GGG | - | chr4_3:69465054-69465073 | None:intergenic | 55.0% | |
| AACTGGCAACCAAAGCCGCT+CGG | + | chr4_3:69465061-69465080 | Msa0659150:CDS | 55.0% | |
| ! | AGCTGATTTCCGAGCGGCTT+TGG | - | chr4_3:69465073-69465092 | None:intergenic | 55.0% |
| GTGTGGCTTCTTCACTCCTC+CGG | - | chr4_3:69465103-69465122 | None:intergenic | 55.0% | |
| GCGGCTGAAGCTTACTTGGT+CGG | + | chr4_3:69465288-69465307 | Msa0659150:CDS | 55.0% | |
| GGACTTGCGAGCAGTCTGCT+TGG | - | chr4_3:69465016-69465035 | None:intergenic | 60.0% | |
| CAGACTGCTCGCAAGTCCAC+CGG | + | chr4_3:69465018-69465037 | Msa0659150:CDS | 60.0% | |
| AGCCGCTCGGAAATCAGCTC+CGG | + | chr4_3:69465074-69465093 | Msa0659150:CDS | 60.0% | |
| TTCTTCACTCCTCCGGTCGC+CGG | - | chr4_3:69465096-69465115 | None:intergenic | 60.0% | |
| GAGCCGAAACAGCACTGCTC+TGG | - | chr4_3:69465260-69465279 | None:intergenic | 60.0% | |
| ACTGCTCGCAAGTCCACCGG+CGG | + | chr4_3:69465021-69465040 | Msa0659150:CDS | 65.0% | |
| CAAGGCTCCCCGGAAGCAAC+TGG | + | chr4_3:69465044-69465063 | Msa0659150:CDS | 65.0% | |
| ! | CGCCGGAGCTGATTTCCGAG+CGG | - | chr4_3:69465079-69465098 | None:intergenic | 65.0% |
| CGGAAATCAGCTCCGGCGAC+CGG | + | chr4_3:69465081-69465100 | Msa0659150:CDS | 65.0% | |
| AAATCAGCTCCGGCGACCGG+AGG | + | chr4_3:69465084-69465103 | Msa0659150:CDS | 65.0% | |
| TCGCAAGTCCACCGGCGGCA+AGG | + | chr4_3:69465026-69465045 | Msa0659150:CDS | 70.0% | |
| CTTCCGGGGAGCCTTGCCGC+CGG | - | chr4_3:69465040-69465059 | None:intergenic | 75.0% | |
| ! | CCACCGGCGGCAAGGCTCCC+CGG | + | chr4_3:69465034-69465053 | Msa0659150:CDS | 80.0% |
| ! | CCGGGGAGCCTTGCCGCCGG+TGG | - | chr4_3:69465037-69465056 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 69465003 | 69465413 | 69465003 | ID=Msa0659150;Name=Msa0659150 |
| chr4_3 | mRNA | 69465003 | 69465413 | 69465003 | ID=Msa0659150-mRNA-1;Parent=Msa0659150;Name=Msa0659150-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|136 |
| chr4_3 | exon | 69465003 | 69465413 | 69465003 | ID=Msa0659150-mRNA-1:exon:20362;Parent=Msa0659150-mRNA-1 |
| chr4_3 | CDS | 69465003 | 69465413 | 69465003 | ID=Msa0659150-mRNA-1:cds;Parent=Msa0659150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
