Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109260 | XP_013467009.1 | 98.964 | 193 | 2 | 0 | 1 | 193 | 368 | 560 | 1.79e-138 | 408 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109260 | A0A072VG87 | 98.964 | 193 | 2 | 0 | 1 | 193 | 368 | 560 | 8.57e-139 | 408 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0109260 | 0.802676 | 5.011233e-49 | -8.615850e-47 |
| Msa0014970 | Msa0109260 | 0.808609 | 2.847764e-50 | -8.615850e-47 |
| Msa0016830 | Msa0109260 | 0.829404 | 5.245864e-55 | -8.615850e-47 |
| Msa0022230 | Msa0109260 | 0.804815 | 1.802021e-49 | -8.615850e-47 |
| Msa0028410 | Msa0109260 | 0.817980 | 2.488740e-52 | -8.615850e-47 |
| Msa0028450 | Msa0109260 | 0.836296 | 1.016887e-56 | -8.615850e-47 |
| Msa0036560 | Msa0109260 | 0.805236 | 1.471563e-49 | -8.615850e-47 |
| Msa0037040 | Msa0109260 | 0.810755 | 9.845064e-51 | -8.615850e-47 |
| Msa0039780 | Msa0109260 | 0.816725 | 4.769684e-52 | -8.615850e-47 |
| Msa0046410 | Msa0109260 | 0.804875 | 1.751104e-49 | -8.615850e-47 |
| Msa0046670 | Msa0109260 | 0.801357 | 9.355401e-49 | -8.615850e-47 |
| Msa0063850 | Msa0109260 | 0.822545 | 2.237343e-53 | -8.615850e-47 |
| Msa0065190 | Msa0109260 | 0.825929 | 3.585407e-54 | -8.615850e-47 |
| Msa0067820 | Msa0109260 | 0.807795 | 4.244691e-50 | -8.615850e-47 |
| Msa0078160 | Msa0109260 | 0.800386 | 1.476665e-48 | -8.615850e-47 |
| Msa0078170 | Msa0109260 | 0.810341 | 1.209850e-50 | -8.615850e-47 |
| Msa0084550 | Msa0109260 | 0.801058 | 1.076813e-48 | -8.615850e-47 |
| Msa0087130 | Msa0109260 | 0.807600 | 4.670039e-50 | -8.615850e-47 |
| Msa0087370 | Msa0109260 | 0.823661 | 1.228201e-53 | -8.615850e-47 |
| Msa0089410 | Msa0109260 | 0.831502 | 1.610043e-55 | -8.615850e-47 |
| Msa0089470 | Msa0109260 | 0.804805 | 1.810775e-49 | -8.615850e-47 |
| Msa0090350 | Msa0109260 | 0.804903 | 1.727707e-49 | -8.615850e-47 |
| Msa0092750 | Msa0109260 | 0.827643 | 1.396937e-54 | -8.615850e-47 |
| Msa0096510 | Msa0109260 | 0.803011 | 4.272294e-49 | -8.615850e-47 |
| Msa0098800 | Msa0109260 | 0.802558 | 5.298994e-49 | -8.615850e-47 |
| Msa0099090 | Msa0109260 | 0.820178 | 7.870046e-53 | -8.615850e-47 |
| Msa0108500 | Msa0109260 | 0.819686 | 1.019527e-52 | -8.615850e-47 |
| Msa0109260 | Msa0110500 | 0.806646 | 7.436675e-50 | -8.615850e-47 |
| Msa0109260 | Msa0112800 | 0.802357 | 5.829672e-49 | -8.615850e-47 |
| Msa0109260 | Msa0114960 | 0.813814 | 2.115296e-51 | -8.615850e-47 |
| Msa0109260 | Msa0118250 | 0.812394 | 4.333387e-51 | -8.615850e-47 |
| Msa0109260 | Msa0124070 | 0.822240 | 2.633464e-53 | -8.615850e-47 |
| Msa0109260 | Msa0130620 | 0.800344 | 1.506269e-48 | -8.615850e-47 |
| Msa0109260 | Msa0133450 | 0.837355 | 5.457066e-57 | -8.615850e-47 |
| Msa0109260 | Msa0134120 | 0.835109 | 2.031697e-56 | -8.615850e-47 |
| Msa0109260 | Msa0136520 | 0.829707 | 4.427904e-55 | -8.615850e-47 |
| Msa0109260 | Msa0138340 | 0.807909 | 4.014340e-50 | -8.615850e-47 |
| Msa0109260 | Msa0139280 | 0.806779 | 6.968088e-50 | -8.615850e-47 |
| Msa0109260 | Msa0139920 | 0.810599 | 1.064104e-50 | -8.615850e-47 |
| Msa0109260 | Msa0140870 | 0.800970 | 1.122750e-48 | -8.615850e-47 |
| Msa0109260 | Msa0141760 | 0.816941 | 4.266027e-52 | -8.615850e-47 |
| Msa0109260 | Msa0143360 | 0.836079 | 1.154693e-56 | -8.615850e-47 |
| Msa0109260 | Msa0147800 | 0.811856 | 5.679425e-51 | -8.615850e-47 |
| Msa0109260 | Msa0147960 | 0.807135 | 5.859450e-50 | -8.615850e-47 |
| Msa0109260 | Msa0155500 | 0.906102 | 2.122775e-80 | -8.615850e-47 |
| Msa0109260 | Msa0164580 | 0.808649 | 2.792363e-50 | -8.615850e-47 |
| Msa0109260 | Msa0165820 | 0.801623 | 8.250347e-49 | -8.615850e-47 |
| Msa0109260 | Msa0166580 | 0.807886 | 4.059942e-50 | -8.615850e-47 |
| Msa0109260 | Msa0168470 | 0.811666 | 6.245685e-51 | -8.615850e-47 |
| Msa0109260 | Msa0170730 | 0.812162 | 4.869458e-51 | -8.615850e-47 |
| Msa0109260 | Msa0175240 | 0.806548 | 7.796747e-50 | -8.615850e-47 |
| Msa0109260 | Msa0184030 | 0.807662 | 4.529829e-50 | -8.615850e-47 |
| Msa0109260 | Msa0184850 | 0.811674 | 6.219801e-51 | -8.615850e-47 |
| Msa0109260 | Msa0186510 | 0.813567 | 2.397428e-51 | -8.615850e-47 |
| Msa0109260 | Msa0186750 | 0.804977 | 1.667495e-49 | -8.615850e-47 |
| Msa0109260 | Msa0194420 | 0.818097 | 2.340849e-52 | -8.615850e-47 |
| Msa0109260 | Msa0194750 | 0.814595 | 1.422220e-51 | -8.615850e-47 |
| Msa0109260 | Msa0197600 | 0.812524 | 4.060406e-51 | -8.615850e-47 |
| Msa0109260 | Msa0208040 | 0.805392 | 1.364960e-49 | -8.615850e-47 |
| Msa0109260 | Msa0208710 | 0.821388 | 4.145218e-53 | -8.615850e-47 |
| Msa0109260 | Msa0209590 | 0.814824 | 1.265247e-51 | -8.615850e-47 |
| Msa0109260 | Msa0232170 | 0.822297 | 2.554905e-53 | -8.615850e-47 |
| Msa0109260 | Msa0236690 | 0.811158 | 8.052607e-51 | -8.615850e-47 |
| Msa0109260 | Msa0249670 | 0.820416 | 6.937966e-53 | -8.615850e-47 |
| Msa0109260 | Msa0269660 | 0.815007 | 1.152636e-51 | -8.615850e-47 |
| Msa0109260 | Msa0272990 | 0.808127 | 3.607096e-50 | -8.615850e-47 |
| Msa0109260 | Msa0278080 | 0.808319 | 3.282823e-50 | -8.615850e-47 |
| Msa0109260 | Msa0307750 | 0.810444 | 1.148975e-50 | -8.615850e-47 |
| Msa0109260 | Msa0310260 | 0.816493 | 5.375478e-52 | -8.615850e-47 |
| Msa0109260 | Msa0314680 | 0.804594 | 2.004583e-49 | -8.615850e-47 |
| Msa0109260 | Msa0317630 | 0.801620 | 8.261537e-49 | -8.615850e-47 |
| Msa0109260 | Msa0324390 | 0.801752 | 7.762391e-49 | -8.615850e-47 |
| Msa0109260 | Msa0327870 | 0.820137 | 8.039106e-53 | -8.615850e-47 |
| Msa0109260 | Msa0340870 | 0.806397 | 8.390137e-50 | -8.615850e-47 |
| Msa0109260 | Msa0355990 | 0.828581 | 8.301777e-55 | -8.615850e-47 |
| Msa0109260 | Msa0367590 | 0.825567 | 4.369897e-54 | -8.615850e-47 |
| Msa0109260 | Msa0368620 | -0.807704 | 4.438569e-50 | -8.615850e-47 |
| Msa0109260 | Msa0370350 | 0.812812 | 3.512374e-51 | -8.615850e-47 |
| Msa0109260 | Msa0372550 | 0.803614 | 3.204494e-49 | -8.615850e-47 |
| Msa0109260 | Msa0372990 | 0.836759 | 7.750317e-57 | -8.615850e-47 |
| Msa0109260 | Msa0373110 | 0.821868 | 3.210955e-53 | -8.615850e-47 |
| Msa0109260 | Msa0375570 | 0.808531 | 2.958298e-50 | -8.615850e-47 |
| Msa0109260 | Msa0379890 | 0.802127 | 6.502553e-49 | -8.615850e-47 |
| Msa0109260 | Msa0385770 | 0.816067 | 6.692899e-52 | -8.615850e-47 |
| Msa0109260 | Msa0385870 | 0.819298 | 1.250079e-52 | -8.615850e-47 |
| Msa0109260 | Msa0389710 | -0.800498 | 1.401126e-48 | -8.615850e-47 |
| Msa0109260 | Msa0390350 | 0.802490 | 5.474126e-49 | -8.615850e-47 |
| Msa0109260 | Msa0404880 | 0.834696 | 2.581522e-56 | -8.615850e-47 |
| Msa0109260 | Msa0408490 | 0.804430 | 2.168555e-49 | -8.615850e-47 |
| Msa0109260 | Msa0413040 | 0.831990 | 1.219958e-55 | -8.615850e-47 |
| Msa0109260 | Msa0413050 | 0.800169 | 1.634877e-48 | -8.615850e-47 |
| Msa0109260 | Msa0415200 | 0.817783 | 2.757395e-52 | -8.615850e-47 |
| Msa0109260 | Msa0417850 | 0.800364 | 1.491847e-48 | -8.615850e-47 |
| Msa0109260 | Msa0421480 | 0.831208 | 1.901657e-55 | -8.615850e-47 |
| Msa0109260 | Msa0424220 | 0.810134 | 1.340282e-50 | -8.615850e-47 |
| Msa0109260 | Msa0425080 | 0.809102 | 2.233055e-50 | -8.615850e-47 |
| Msa0109260 | Msa0429500 | 0.821583 | 3.737756e-53 | -8.615850e-47 |
| Msa0109260 | Msa0429550 | 0.821467 | 3.975354e-53 | -8.615850e-47 |
| Msa0109260 | Msa0431940 | 0.804230 | 2.387215e-49 | -8.615850e-47 |
| Msa0109260 | Msa0449220 | 0.811702 | 6.134409e-51 | -8.615850e-47 |
| Msa0109260 | Msa0453310 | 0.836267 | 1.034339e-56 | -8.615850e-47 |
| Msa0109260 | Msa0460220 | 0.818634 | 1.769406e-52 | -8.615850e-47 |
| Msa0109260 | Msa0463580 | 0.825797 | 3.854262e-54 | -8.615850e-47 |
| Msa0109260 | Msa0467480 | 0.818100 | 2.337710e-52 | -8.615850e-47 |
| Msa0109260 | Msa0468050 | -0.812244 | 4.674918e-51 | -8.615850e-47 |
| Msa0109260 | Msa0469770 | 0.812669 | 3.774020e-51 | -8.615850e-47 |
| Msa0109260 | Msa0469840 | 0.819668 | 1.029392e-52 | -8.615850e-47 |
| Msa0109260 | Msa0480260 | -0.808965 | 2.390131e-50 | -8.615850e-47 |
| Msa0109260 | Msa0483090 | 0.827654 | 1.388692e-54 | -8.615850e-47 |
| Msa0109260 | Msa0501540 | 0.811138 | 8.131632e-51 | -8.615850e-47 |
| Msa0109260 | Msa0510660 | 0.803314 | 3.698379e-49 | -8.615850e-47 |
| Msa0109260 | Msa0510750 | 0.800651 | 1.304164e-48 | -8.615850e-47 |
| Msa0109260 | Msa0512930 | 0.808636 | 2.809267e-50 | -8.615850e-47 |
| Msa0109260 | Msa0515400 | 0.823034 | 1.721350e-53 | -8.615850e-47 |
| Msa0109260 | Msa0515420 | 0.817045 | 4.042002e-52 | -8.615850e-47 |
| Msa0109260 | Msa0524730 | 0.804335 | 2.269817e-49 | -8.615850e-47 |
| Msa0109260 | Msa0525940 | 0.858360 | 8.688142e-63 | -8.615850e-47 |
| Msa0109260 | Msa0527210 | 0.807740 | 4.360066e-50 | -8.615850e-47 |
| Msa0109260 | Msa0530250 | 0.808977 | 2.376105e-50 | -8.615850e-47 |
| Msa0109260 | Msa0537960 | 0.817766 | 2.781819e-52 | -8.615850e-47 |
| Msa0109260 | Msa0538100 | 0.803458 | 3.452508e-49 | -8.615850e-47 |
| Msa0109260 | Msa0550840 | 0.804342 | 2.262015e-49 | -8.615850e-47 |
| Msa0109260 | Msa0554700 | 0.821668 | 3.572410e-53 | -8.615850e-47 |
| Msa0109260 | Msa0555510 | 0.818501 | 1.897188e-52 | -8.615850e-47 |
| Msa0109260 | Msa0558800 | 0.808056 | 3.735474e-50 | -8.615850e-47 |
| Msa0109260 | Msa0559640 | 0.801684 | 8.018099e-49 | -8.615850e-47 |
| Msa0109260 | Msa0565320 | 0.824082 | 9.783827e-54 | -8.615850e-47 |
| Msa0109260 | Msa0565430 | 0.809136 | 2.195911e-50 | -8.615850e-47 |
| Msa0109260 | Msa0565470 | 0.824771 | 6.738870e-54 | -8.615850e-47 |
| Msa0109260 | Msa0565930 | 0.834868 | 2.336523e-56 | -8.615850e-47 |
| Msa0109260 | Msa0566090 | 0.815000 | 1.156631e-51 | -8.615850e-47 |
| Msa0109260 | Msa0584250 | 0.813084 | 3.060846e-51 | -8.615850e-47 |
| Msa0109260 | Msa0585770 | 0.803536 | 3.326187e-49 | -8.615850e-47 |
| Msa0109260 | Msa0587060 | 0.835777 | 1.377097e-56 | -8.615850e-47 |
| Msa0109260 | Msa0595240 | 0.840276 | 9.582994e-58 | -8.615850e-47 |
| Msa0109260 | Msa0598470 | 0.806028 | 1.003392e-49 | -8.615850e-47 |
| Msa0109260 | Msa0606180 | 0.800877 | 1.172778e-48 | -8.615850e-47 |
| Msa0109260 | Msa0606260 | 0.815162 | 1.064683e-51 | -8.615850e-47 |
| Msa0109260 | Msa0606680 | 0.815441 | 9.229499e-52 | -8.615850e-47 |
| Msa0109260 | Msa0608940 | 0.853028 | 3.132170e-61 | -8.615850e-47 |
| Msa0109260 | Msa0614390 | 0.800982 | 1.116097e-48 | -8.615850e-47 |
| Msa0109260 | Msa0619450 | 0.816007 | 6.904200e-52 | -8.615850e-47 |
| Msa0109260 | Msa0619480 | 0.807657 | 4.541514e-50 | -8.615850e-47 |
| Msa0109260 | Msa0619530 | 0.801856 | 7.390159e-49 | -8.615850e-47 |
| Msa0109260 | Msa0623480 | 0.808596 | 2.866299e-50 | -8.615850e-47 |
| Msa0109260 | Msa0625900 | 0.802930 | 4.440938e-49 | -8.615850e-47 |
| Msa0109260 | Msa0626890 | 0.805483 | 1.306319e-49 | -8.615850e-47 |
| Msa0109260 | Msa0626900 | 0.806956 | 6.395474e-50 | -8.615850e-47 |
| Msa0109260 | Msa0640780 | 0.807965 | 3.906195e-50 | -8.615850e-47 |
| Msa0109260 | Msa0648410 | 0.818348 | 2.054129e-52 | -8.615850e-47 |
| Msa0109260 | Msa0649530 | 0.813401 | 2.607945e-51 | -8.615850e-47 |
| Msa0109260 | Msa0659580 | 0.818290 | 2.117189e-52 | -8.615850e-47 |
| Msa0109260 | Msa0659640 | 0.803815 | 2.911752e-49 | -8.615850e-47 |
| Msa0109260 | Msa0663690 | 0.802675 | 5.013445e-49 | -8.615850e-47 |
| Msa0109260 | Msa0665010 | 0.830835 | 2.347710e-55 | -8.615850e-47 |
| Msa0109260 | Msa0667680 | 0.814297 | 1.655155e-51 | -8.615850e-47 |
| Msa0109260 | Msa0668000 | 0.855606 | 5.634797e-62 | -8.615850e-47 |
| Msa0109260 | Msa0669710 | 0.801657 | 8.121261e-49 | -8.615850e-47 |
| Msa0109260 | Msa0669750 | 0.802964 | 4.369195e-49 | -8.615850e-47 |
| Msa0109260 | Msa0675250 | 0.815228 | 1.029370e-51 | -8.615850e-47 |
| Msa0109260 | Msa0681100 | 0.802160 | 6.400288e-49 | -8.615850e-47 |
| Msa0109260 | Msa0690920 | 0.805081 | 1.585344e-49 | -8.615850e-47 |
| Msa0109260 | Msa0691740 | 0.826455 | 2.688102e-54 | -8.615850e-47 |
| Msa0109260 | Msa0712670 | 0.859532 | 3.876957e-63 | -8.615850e-47 |
| Msa0109260 | Msa0714060 | 0.848986 | 4.320564e-60 | -8.615850e-47 |
| Msa0109260 | Msa0714200 | 0.853574 | 2.184711e-61 | -8.615850e-47 |
| Msa0109260 | Msa0714230 | 0.800259 | 1.567657e-48 | -8.615850e-47 |
| Msa0109260 | Msa0719160 | 0.809981 | 1.446387e-50 | -8.615850e-47 |
| Msa0109260 | Msa0730250 | 0.833411 | 5.416535e-56 | -8.615850e-47 |
| Msa0109260 | Msa0733460 | 0.815052 | 1.126572e-51 | -8.615850e-47 |
| Msa0109260 | Msa0741710 | 0.819025 | 1.441976e-52 | -8.615850e-47 |
| Msa0109260 | Msa0747900 | 0.819071 | 1.407818e-52 | -8.615850e-47 |
| Msa0109260 | Msa0748980 | 0.842756 | 2.128458e-58 | -8.615850e-47 |
| Msa0109260 | Msa0749160 | 0.840099 | 1.066272e-57 | -8.615850e-47 |
| Msa0109260 | Msa0752830 | 0.864901 | 8.712098e-65 | -8.615850e-47 |
| Msa0109260 | Msa0752950 | 0.838754 | 2.383261e-57 | -8.615850e-47 |
| Msa0109260 | Msa0754840 | 0.818932 | 1.514140e-52 | -8.615850e-47 |
| Msa0109260 | Msa0756440 | 0.855064 | 8.105879e-62 | -8.615850e-47 |
| Msa0109260 | Msa0768240 | 0.816104 | 6.568024e-52 | -8.615850e-47 |
| Msa0109260 | Msa0770540 | 0.817059 | 4.012130e-52 | -8.615850e-47 |
| Msa0109260 | Msa0776590 | 0.814700 | 1.348406e-51 | -8.615850e-47 |
| Msa0109260 | Msa0792860 | 0.805737 | 1.155288e-49 | -8.615850e-47 |
| Msa0109260 | Msa0801630 | 0.807020 | 6.196799e-50 | -8.615850e-47 |
| Msa0109260 | Msa0808500 | 0.816322 | 5.869737e-52 | -8.615850e-47 |
| Msa0109260 | Msa0825520 | 0.848138 | 7.418108e-60 | -8.615850e-47 |
| Msa0109260 | Msa0835010 | 0.804487 | 2.109515e-49 | -8.615850e-47 |
| Msa0109260 | Msa0835550 | 0.839747 | 1.316955e-57 | -8.615850e-47 |
| Msa0109260 | Msa0844970 | 0.805366 | 1.382305e-49 | -8.615850e-47 |
| Msa0109260 | Msa0849290 | 0.802763 | 4.808719e-49 | -8.615850e-47 |
| Msa0109260 | Msa0855050 | 0.812971 | 3.241124e-51 | -8.615850e-47 |
| Msa0109260 | Msa0864730 | 0.851609 | 7.941485e-61 | -8.615850e-47 |
| Msa0109260 | Msa0864750 | 0.850481 | 1.651820e-60 | -8.615850e-47 |
| Msa0109260 | Msa0866510 | 0.811973 | 5.355761e-51 | -8.615850e-47 |
| Msa0109260 | Msa0873070 | 0.806178 | 9.332242e-50 | -8.615850e-47 |
| Msa0109260 | Msa0880310 | 0.842098 | 3.180935e-58 | -8.615850e-47 |
| Msa0109260 | Msa0895850 | 0.855127 | 7.772856e-62 | -8.615850e-47 |
| Msa0109260 | Msa0899080 | 0.827920 | 1.198262e-54 | -8.615850e-47 |
| Msa0109260 | Msa0906180 | 0.804837 | 1.783016e-49 | -8.615850e-47 |
| Msa0109260 | Msa0927190 | 0.807450 | 5.025715e-50 | -8.615850e-47 |
| Msa0109260 | Msa0927890 | 0.842547 | 2.419250e-58 | -8.615850e-47 |
| Msa0109260 | Msa0930150 | 0.808766 | 2.636250e-50 | -8.615850e-47 |
| Msa0109260 | Msa0938150 | 0.806326 | 8.684573e-50 | -8.615850e-47 |
| Msa0109260 | Msa0938370 | 0.823469 | 1.362152e-53 | -8.615850e-47 |
| Msa0109260 | Msa0961200 | 0.801860 | 7.375767e-49 | -8.615850e-47 |
| Msa0109260 | Msa0961230 | 0.831734 | 1.411024e-55 | -8.615850e-47 |
| Msa0109260 | Msa0967250 | 0.829528 | 4.894459e-55 | -8.615850e-47 |
| Msa0109260 | Msa0967260 | 0.870318 | 1.597554e-66 | -8.615850e-47 |
| Msa0109260 | Msa0968960 | 0.807522 | 4.851432e-50 | -8.615850e-47 |
| Msa0109260 | Msa0975460 | 0.825036 | 5.833868e-54 | -8.615850e-47 |
| Msa0109260 | Msa0995660 | 0.827074 | 1.912117e-54 | -8.615850e-47 |
| Msa0109260 | Msa0998940 | 0.840648 | 7.662614e-58 | -8.615850e-47 |
| Msa0109260 | Msa0999480 | 0.823664 | 1.226265e-53 | -8.615850e-47 |
| Msa0109260 | Msa1015020 | 0.815926 | 7.197078e-52 | -8.615850e-47 |
| Msa0109260 | Msa1019040 | 0.807491 | 4.926401e-50 | -8.615850e-47 |
| Msa0109260 | Msa1019370 | 0.827438 | 1.564325e-54 | -8.615850e-47 |
| Msa0109260 | Msa1021680 | 0.808256 | 3.385966e-50 | -8.615850e-47 |
| Msa0109260 | Msa1022660 | 0.808287 | 3.335216e-50 | -8.615850e-47 |
| Msa0109260 | Msa1031220 | 0.820001 | 8.635359e-53 | -8.615850e-47 |
| Msa0109260 | Msa1041620 | 0.805072 | 1.592362e-49 | -8.615850e-47 |
| Msa0109260 | Msa1042380 | 0.835729 | 1.416080e-56 | -8.615850e-47 |
| Msa0109260 | Msa1045860 | 0.821912 | 3.137433e-53 | -8.615850e-47 |
| Msa0109260 | Msa1045950 | 0.819013 | 1.451668e-52 | -8.615850e-47 |
| Msa0109260 | Msa1055490 | 0.816492 | 5.379089e-52 | -8.615850e-47 |
| Msa0109260 | Msa1056520 | 0.802249 | 6.135699e-49 | -8.615850e-47 |
| Msa0109260 | Msa1056590 | 0.808812 | 2.576970e-50 | -8.615850e-47 |
| Msa0109260 | Msa1066790 | 0.821421 | 4.073700e-53 | -8.615850e-47 |
| Msa0109260 | Msa1066980 | 0.819304 | 1.245993e-52 | -8.615850e-47 |
| Msa0109260 | Msa1067910 | 0.808606 | 2.851249e-50 | -8.615850e-47 |
| Msa0109260 | Msa1071380 | 0.846575 | 1.992337e-59 | -8.615850e-47 |
| Msa0109260 | Msa1071460 | 0.822189 | 2.706205e-53 | -8.615850e-47 |
| Msa0109260 | Msa1072640 | 0.809043 | 2.299466e-50 | -8.615850e-47 |
| Msa0109260 | Msa1083660 | 0.803061 | 4.171272e-49 | -8.615850e-47 |
| Msa0109260 | Msa1085370 | 0.823028 | 1.726389e-53 | -8.615850e-47 |
| Msa0109260 | Msa1087410 | 0.816633 | 5.001498e-52 | -8.615850e-47 |
| Msa0109260 | Msa1098470 | 0.820679 | 6.036940e-53 | -8.615850e-47 |
| Msa0109260 | Msa1099330 | 0.802820 | 4.678527e-49 | -8.615850e-47 |
| Msa0109260 | Msa1101300 | 0.813609 | 2.347615e-51 | -8.615850e-47 |
| Msa0109260 | Msa1104420 | 0.824811 | 6.592718e-54 | -8.615850e-47 |
| Msa0109260 | Msa1105680 | 0.801949 | 7.073558e-49 | -8.615850e-47 |
| Msa0109260 | Msa1110030 | 0.829479 | 5.031695e-55 | -8.615850e-47 |
| Msa0109260 | Msa1112230 | 0.846704 | 1.837586e-59 | -8.615850e-47 |
| Msa0109260 | Msa1113210 | 0.809410 | 1.918136e-50 | -8.615850e-47 |
| Msa0109260 | Msa1125100 | 0.829747 | 4.329999e-55 | -8.615850e-47 |
| Msa0109260 | Msa1125150 | 0.833566 | 4.953609e-56 | -8.615850e-47 |
| Msa0109260 | Msa1136770 | 0.802274 | 6.064336e-49 | -8.615850e-47 |
| Msa0109260 | Msa1143860 | 0.806432 | 8.249301e-50 | -8.615850e-47 |
| Msa0109260 | Msa1144470 | 0.811469 | 6.893163e-51 | -8.615850e-47 |
| Msa0109260 | Msa1145070 | 0.830063 | 3.626206e-55 | -8.615850e-47 |
| Msa0109260 | Msa1145430 | 0.803935 | 2.749075e-49 | -8.615850e-47 |
| Msa0109260 | Msa1147600 | 0.810259 | 1.259891e-50 | -8.615850e-47 |
| Msa0109260 | Msa1147870 | 0.823843 | 1.113681e-53 | -8.615850e-47 |
| Msa0109260 | Msa1166520 | 0.811901 | 5.551919e-51 | -8.615850e-47 |
| Msa0109260 | Msa1172120 | 0.809268 | 2.057817e-50 | -8.615850e-47 |
| Msa0109260 | Msa1182950 | 0.804199 | 2.422380e-49 | -8.615850e-47 |
| Msa0109260 | Msa1182960 | 0.816156 | 6.394877e-52 | -8.615850e-47 |
| Msa0109260 | Msa1186010 | 0.839807 | 1.270564e-57 | -8.615850e-47 |
| Msa0109260 | Msa1193680 | 0.823646 | 1.238425e-53 | -8.615850e-47 |
| Msa0109260 | Msa1195860 | 0.806079 | 9.791807e-50 | -8.615850e-47 |
| Msa0109260 | Msa1199690 | 0.809592 | 1.753453e-50 | -8.615850e-47 |
| Msa0109260 | Msa1203840 | 0.851821 | 6.914477e-61 | -8.615850e-47 |
| Msa0109260 | Msa1203860 | 0.860958 | 1.436334e-63 | -8.615850e-47 |
| Msa0109260 | Msa1206510 | 0.803842 | 2.874486e-49 | -8.615850e-47 |
| Msa0109260 | Msa1211280 | 0.845135 | 4.903386e-59 | -8.615850e-47 |
| Msa0109260 | Msa1211370 | 0.813747 | 2.188444e-51 | -8.615850e-47 |
| Msa0109260 | Msa1224310 | 0.808745 | 2.663628e-50 | -8.615850e-47 |
| Msa0109260 | Msa1225140 | 0.806578 | 7.686841e-50 | -8.615850e-47 |
| Msa0109260 | Msa1230190 | 0.800067 | 1.714737e-48 | -8.615850e-47 |
| Msa0109260 | Msa1240240 | 0.859303 | 4.542063e-63 | -8.615850e-47 |
| Msa0109260 | Msa1245870 | 0.813612 | 2.343736e-51 | -8.615850e-47 |
| Msa0109260 | Msa1250490 | 0.813654 | 2.294893e-51 | -8.615850e-47 |
| Msa0109260 | Msa1265900 | 0.808518 | 2.977731e-50 | -8.615850e-47 |
| Msa0109260 | Msa1272770 | 0.805655 | 1.202208e-49 | -8.615850e-47 |
| Msa0109260 | Msa1285870 | 0.812708 | 3.700224e-51 | -8.615850e-47 |
| Msa0109260 | Msa1286950 | 0.807519 | 4.857693e-50 | -8.615850e-47 |
| Msa0109260 | Msa1288970 | 0.804829 | 1.790594e-49 | -8.615850e-47 |
| Msa0109260 | Msa1293580 | 0.807889 | 4.053588e-50 | -8.615850e-47 |
| Msa0109260 | Msa1296270 | 0.849920 | 2.372571e-60 | -8.615850e-47 |
| Msa0109260 | Msa1296610 | 0.817478 | 3.230102e-52 | -8.615850e-47 |
| Msa0109260 | Msa1297550 | 0.802561 | 5.292325e-49 | -8.615850e-47 |
| Msa0109260 | Msa1303470 | 0.809089 | 2.247969e-50 | -8.615850e-47 |
| Msa0109260 | Msa1317340 | 0.800917 | 1.150828e-48 | -8.615850e-47 |
| Msa0109260 | Msa1319230 | 0.814640 | 1.389809e-51 | -8.615850e-47 |
| Msa0109260 | Msa1320660 | 0.831166 | 1.947603e-55 | -8.615850e-47 |
| Msa0109260 | Msa1326900 | 0.830788 | 2.411521e-55 | -8.615850e-47 |
| Msa0109260 | Msa1329820 | 0.860998 | 1.397016e-63 | -8.615850e-47 |
| Msa0109260 | Msa1330900 | 0.813412 | 2.593029e-51 | -8.615850e-47 |
| Msa0109260 | Msa1330910 | 0.858242 | 9.422809e-63 | -8.615850e-47 |
| Msa0109260 | Msa1336350 | 0.816470 | 5.438673e-52 | -8.615850e-47 |
| Msa0109260 | Msa1339310 | 0.803306 | 3.712844e-49 | -8.615850e-47 |
| Msa0109260 | Msa1346220 | 0.842594 | 2.350820e-58 | -8.615850e-47 |
| Msa0109260 | Msa1346340 | 0.827812 | 1.272410e-54 | -8.615850e-47 |
| Msa0109260 | Msa1356730 | 0.810422 | 1.161821e-50 | -8.615850e-47 |
| Msa0109260 | Msa1357760 | 0.812013 | 5.248344e-51 | -8.615850e-47 |
| Msa0109260 | Msa1364520 | 0.802070 | 6.680143e-49 | -8.615850e-47 |
| Msa0109260 | Msa1364850 | 0.817385 | 3.390006e-52 | -8.615850e-47 |
| Msa0109260 | Msa1368660 | 0.801155 | 1.029043e-48 | -8.615850e-47 |
| Msa0109260 | Msa1371060 | 0.819350 | 1.216265e-52 | -8.615850e-47 |
| Msa0109260 | Msa1371540 | 0.805196 | 1.499981e-49 | -8.615850e-47 |
| Msa0109260 | Msa1372470 | 0.813116 | 3.012553e-51 | -8.615850e-47 |
| Msa0109260 | Msa1376010 | 0.806448 | 8.186843e-50 | -8.615850e-47 |
| Msa0109260 | Msa1381300 | 0.806972 | 6.344166e-50 | -8.615850e-47 |
| Msa0109260 | Msa1381720 | 0.814261 | 1.685655e-51 | -8.615850e-47 |
| Msa0109260 | Msa1381830 | 0.852927 | 3.348478e-61 | -8.615850e-47 |
| Msa0109260 | Msa1382100 | 0.815628 | 8.385144e-52 | -8.615850e-47 |
| Msa0109260 | Msa1384620 | 0.847474 | 1.130108e-59 | -8.615850e-47 |
| Msa0109260 | Msa1384980 | 0.803590 | 3.241269e-49 | -8.615850e-47 |
| Msa0109260 | Msa1388270 | 0.858379 | 8.576269e-63 | -8.615850e-47 |
| Msa0109260 | Msa1390480 | 0.806357 | 8.556307e-50 | -8.615850e-47 |
| Msa0109260 | Msa1391400 | 0.801305 | 9.587659e-49 | -8.615850e-47 |
| Msa0109260 | Msa1392570 | 0.827838 | 1.253915e-54 | -8.615850e-47 |
| Msa0109260 | Msa1395580 | 0.808963 | 2.392390e-50 | -8.615850e-47 |
| Msa0109260 | Msa1395700 | 0.807755 | 4.329277e-50 | -8.615850e-47 |
| Msa0109260 | Msa1397550 | 0.829261 | 5.682620e-55 | -8.615850e-47 |
| Msa0109260 | Msa1413880 | 0.851474 | 8.669442e-61 | -8.615850e-47 |
| Msa0109260 | Msa1414000 | 0.838216 | 3.281380e-57 | -8.615850e-47 |
| Msa0109260 | Msa1414280 | 0.801600 | 8.340677e-49 | -8.615850e-47 |
| Msa0109260 | Msa1414790 | 0.804531 | 2.065532e-49 | -8.615850e-47 |
| Msa0109260 | Msa1418010 | 0.807530 | 4.832424e-50 | -8.615850e-47 |
| Msa0109260 | Msa1418840 | 0.810547 | 1.091781e-50 | -8.615850e-47 |
| Msa0109260 | Msa1419040 | 0.800603 | 1.333805e-48 | -8.615850e-47 |
| Msa0109260 | Msa1424250 | 0.800715 | 1.265404e-48 | -8.615850e-47 |
| Msa0109260 | Msa1427260 | 0.837130 | 6.230762e-57 | -8.615850e-47 |
| Msa0109260 | Msa1430940 | 0.804260 | 2.352871e-49 | -8.615850e-47 |
| Msa0109260 | Msa1432250 | 0.801469 | 8.873619e-49 | -8.615850e-47 |
| Msa0109260 | Msa1434850 | 0.822047 | 2.918846e-53 | -8.615850e-47 |
| Msa0109260 | Msa1435690 | 0.813830 | 2.098367e-51 | -8.615850e-47 |
| Msa0109260 | Msa1436660 | 0.807616 | 4.634346e-50 | -8.615850e-47 |
| Msa0109260 | Msa1446220 | 0.808465 | 3.055971e-50 | -8.615850e-47 |
| Msa0109260 | Msa1447990 | 0.801170 | 1.021441e-48 | -8.615850e-47 |
| Msa0109260 | Msa1450850 | 0.806449 | 8.182808e-50 | -8.615850e-47 |
| Msa0109260 | Msa1451690 | 0.813191 | 2.899698e-51 | -8.615850e-47 |
| Msa0109260 | Msa1452300 | 0.809661 | 1.694269e-50 | -8.615850e-47 |
| Msa0109260 | Msa1459630 | 0.839174 | 1.854871e-57 | -8.615850e-47 |
| Msa0109260 | Msa1463500 | 0.801275 | 9.721549e-49 | -8.615850e-47 |
| Msa0109260 | Msa1465380 | 0.802543 | 5.336255e-49 | -8.615850e-47 |
| Msa0109260 | Msa1465410 | 0.804895 | 1.734068e-49 | -8.615850e-47 |
| Msa0109260 | Msa1465950 | 0.801255 | 9.815020e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109260 | MtrunA17_Chr1g0166271 | 98.964 | 193 | 2 | 0 | 1 | 193 | 368 | 560 | 1.65e-142 | 408 |
| Msa0109260 | MtrunA17_Chr3g0143811 | 43.333 | 180 | 88 | 5 | 7 | 185 | 239 | 405 | 4.47e-34 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0109260 | AT3G55760.2 | 80.423 | 189 | 37 | 0 | 1 | 189 | 388 | 576 | 8.48e-111 | 328 |
| Msa0109260 | AT3G55760.3 | 80.423 | 189 | 37 | 0 | 1 | 189 | 388 | 576 | 8.48e-111 | 328 |
| Msa0109260 | AT3G55760.1 | 80.423 | 189 | 37 | 0 | 1 | 189 | 388 | 576 | 8.48e-111 | 328 |
| Msa0109260 | AT1G42430.2 | 44.865 | 185 | 87 | 6 | 7 | 190 | 213 | 383 | 3.57e-36 | 130 |
| Msa0109260 | AT1G42430.1 | 44.865 | 185 | 87 | 6 | 7 | 190 | 230 | 400 | 3.57e-36 | 130 |
Find 141 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATATGGTTTCGGCAAATT+AGG | 0.113199 | 1_3:-21194539 | None:intergenic |
| ACCATTCTGTTGTCTTAATT+TGG | 0.162728 | 1_3:-21194769 | None:intergenic |
| GAAATGTTTGGCGTGAATTT+TGG | 0.187840 | 1_3:+21192751 | Msa0109260:five_prime_UTR |
| TATGAAAGATTCCCTCATTT+TGG | 0.191007 | 1_3:+21194448 | Msa0109260:CDS |
| TAGAGTGGCAAGAGAAGTTT+TGG | 0.220340 | 1_3:+21192664 | Msa0109260:five_prime_UTR |
| CAAGAGTCCGGAACACAAAA+TGG | 0.241861 | 1_3:+21192132 | Msa0109260:five_prime_UTR |
| TGGAGAAAACTGCAGATAAA+TGG | 0.248578 | 1_3:+21193238 | Msa0109260:CDS |
| TTCTGATGAGTTTGGCTATA+AGG | 0.253590 | 1_3:+21192692 | Msa0109260:five_prime_UTR |
| GACCTTTCCTTCTCGATAAC+AGG | 0.274398 | 1_3:-21192312 | None:intergenic |
| CCAGCATCGAGGGGTGTGTT+TGG | 0.316320 | 1_3:-21193363 | None:intergenic |
| TTCAACCCATTAGCATCATT+TGG | 0.328459 | 1_3:-21192249 | None:intergenic |
| TATATGGTTTCGGCAAATTA+GGG | 0.337964 | 1_3:-21194538 | None:intergenic |
| TGGGAGGCTTCTGATGAGTT+TGG | 0.351158 | 1_3:+21192684 | Msa0109260:five_prime_UTR |
| CAGATGGTGGATGGGAGAAA+TGG | 0.354452 | 1_3:+21194230 | Msa0109260:CDS |
| GTGATGAGTGGCAGGAAAAT+TGG | 0.354598 | 1_3:+21193277 | Msa0109260:CDS |
| ACCCCTCCAGTCATCGTTAG+AGG | 0.358186 | 1_3:+21192401 | Msa0109260:five_prime_UTR |
| CTTTCACTGCTTTGAAAACT+CGG | 0.376409 | 1_3:+21194474 | Msa0109260:CDS |
| GATCTGACAGAATCAGATTC+AGG | 0.377933 | 1_3:+21192084 | None:intergenic |
| AGATGGTGGATGGGAGAAAT+GGG | 0.378142 | 1_3:+21194231 | Msa0109260:CDS |
| GGAGAAAACTGCAGATAAAT+GGG | 0.383196 | 1_3:+21193239 | Msa0109260:CDS |
| CATCTGGTCAAGCTGAGAAA+TGG | 0.383913 | 1_3:+21193316 | Msa0109260:CDS |
| GGGAGAAATGGGGCGACAAA+TGG | 0.387783 | 1_3:+21194242 | Msa0109260:CDS |
| CCAAACACACCCCTCGATGC+TGG | 0.389295 | 1_3:+21193363 | Msa0109260:CDS |
| CAGCATCGAGGGGTGTGTTT+GGG | 0.394807 | 1_3:-21193362 | None:intergenic |
| ATGATTTACTGTCCACTTCA+AGG | 0.402636 | 1_3:-21192521 | None:intergenic |
| GGAAAACGGGCTACTGCATA+TGG | 0.406999 | 1_3:+21193218 | Msa0109260:intron |
| GCATAAAATACACTGACAAA+TGG | 0.414004 | 1_3:+21194194 | Msa0109260:CDS |
| TCTTTCTGTGTTCCTGACTT+TGG | 0.415793 | 1_3:-21192168 | None:intergenic |
| TGGCTATAAGGAACTTGGTT+CGG | 0.423384 | 1_3:+21192704 | Msa0109260:five_prime_UTR |
| GCAGATAAATGGGGAAGAAA+TGG | 0.424698 | 1_3:+21193249 | Msa0109260:CDS |
| GGTGAGCAACACAATGGTTC+TGG | 0.424760 | 1_3:+21194355 | Msa0109260:CDS |
| ATGCTGGGCATGCTCATGTC+TGG | 0.426296 | 1_3:+21193379 | Msa0109260:CDS |
| GTTCCTCCAAATGATGCTAA+TGG | 0.427103 | 1_3:+21192243 | Msa0109260:five_prime_UTR |
| GCCGAAACCATATAAAATAT+AGG | 0.432274 | 1_3:+21194547 | Msa0109260:three_prime_UTR |
| TTCCTTCTCGATAACAGGAT+TGG | 0.433266 | 1_3:-21192307 | None:intergenic |
| GAACTTGGTTCGGAGAAATC+TGG | 0.433556 | 1_3:+21192714 | Msa0109260:five_prime_UTR |
| ATCTGGTCAAGCTGAGAAAT+GGG | 0.440062 | 1_3:+21193317 | Msa0109260:CDS |
| TTGGAGAGAATCCATGCGTC+AGG | 0.446144 | 1_3:+21192770 | Msa0109260:exon |
| GAGCAGTAGTGGTGAACATT+GGG | 0.446442 | 1_3:+21194399 | Msa0109260:CDS |
| GGAGAAATGGGGCGACAAAT+GGG | 0.449865 | 1_3:+21194243 | Msa0109260:CDS |
| GACAGTAAATCATCACCTAT+TGG | 0.451090 | 1_3:+21192531 | Msa0109260:five_prime_UTR |
| CTCCACCATCTCGTTCCATC+AGG | 0.454183 | 1_3:-21192561 | None:intergenic |
| TCCACCATCTGTTGAACGCT+CGG | 0.460074 | 1_3:-21194218 | None:intergenic |
| CACACGAAATGCAAGATACT+TGG | 0.460475 | 1_3:+21194425 | Msa0109260:CDS |
| CAAGCTCTTCTGAAAGTGTA+AGG | 0.460941 | 1_3:+21194615 | Msa0109260:three_prime_UTR |
| CATAAAATACACTGACAAAT+GGG | 0.461214 | 1_3:+21194195 | Msa0109260:CDS |
| ATAACAGGATTGGATAATGT+TGG | 0.462117 | 1_3:-21192297 | None:intergenic |
| CTGAGAAATGGGCACACAAA+TGG | 0.464068 | 1_3:+21193328 | Msa0109260:CDS |
| CTTACAATTTATGCAGAAAG+TGG | 0.464214 | 1_3:+21194674 | Msa0109260:three_prime_UTR |
| GAGAGCGCTGGAACCGGACT+TGG | 0.466122 | 1_3:+21194332 | Msa0109260:CDS |
| TTGAAAACTCGGTTCAACTC+AGG | 0.466626 | 1_3:+21194485 | Msa0109260:CDS |
| CCATCAGGATTCACACCAAT+AGG | 0.468455 | 1_3:-21192546 | None:intergenic |
| AGCACGGAGAGCGCTGGAAC+CGG | 0.469923 | 1_3:+21194326 | Msa0109260:CDS |
| ATGGAATCAAGAGAGATTGC+GGG | 0.475273 | 1_3:-21192335 | None:intergenic |
| AAATCTGGACGTGATGCAAA+TGG | 0.476678 | 1_3:+21192729 | Msa0109260:five_prime_UTR |
| TGAGTAAGTAAACTCTCAAA+TGG | 0.477010 | 1_3:-21192354 | None:intergenic |
| TGTGTTGCTCACCCCAAGTC+CGG | 0.478776 | 1_3:-21194345 | None:intergenic |
| TGGTAAAGGTGATGAGTGGC+AGG | 0.479211 | 1_3:+21193269 | Msa0109260:CDS |
| CACCTACAAATGACACCATC+AGG | 0.483819 | 1_3:-21192606 | None:intergenic |
| CAAACACACCCCTCGATGCT+GGG | 0.486060 | 1_3:+21193364 | Msa0109260:CDS |
| TTCCTCCAAATGATGCTAAT+GGG | 0.498741 | 1_3:+21192244 | Msa0109260:five_prime_UTR |
| TTCGAACACTACAATGCATC+TGG | 0.499013 | 1_3:+21193300 | Msa0109260:CDS |
| ACGAGATGGTGGAGAGAGAC+GGG | 0.501456 | 1_3:+21192570 | Msa0109260:five_prime_UTR |
| ATGAGCATGCCCAGCATCGA+GGG | 0.501980 | 1_3:-21193373 | None:intergenic |
| AAATGCTCATGGCATCAAGC+AGG | 0.505562 | 1_3:+21194282 | Msa0109260:CDS |
| AGAGCGCTGGAACCGGACTT+GGG | 0.507830 | 1_3:+21194333 | Msa0109260:CDS |
| AACTACTTCTGCCGCATGGT+CGG | 0.509484 | 1_3:-21192493 | None:intergenic |
| GAGTTTGGCTATAAGGAACT+TGG | 0.516769 | 1_3:+21192699 | Msa0109260:five_prime_UTR |
| TTTGAACCTCTAACGATGAC+TGG | 0.524222 | 1_3:-21192407 | None:intergenic |
| ACACAGAAAGATGGTATCCC+AGG | 0.524867 | 1_3:+21192180 | Msa0109260:five_prime_UTR |
| AAGGTAAGCACGGAGAGCGC+TGG | 0.526501 | 1_3:+21194320 | Msa0109260:CDS |
| AAGAGTCCGGAACACAAAAT+GGG | 0.528614 | 1_3:+21192133 | Msa0109260:five_prime_UTR |
| AGCGTTCAACAGATGGTGGA+TGG | 0.528680 | 1_3:+21194221 | Msa0109260:CDS |
| TGAAAACTCGGTTCAACTCA+GGG | 0.532760 | 1_3:+21194486 | Msa0109260:CDS |
| AGAGTCTCCTTCTGTGGAAG+AGG | 0.534266 | 1_3:+21192446 | Msa0109260:five_prime_UTR |
| CTGAAAGTGTAAGGAATGAA+TGG | 0.535552 | 1_3:+21194624 | Msa0109260:three_prime_UTR |
| TCTGGATGGGTTCACAAGTA+CGG | 0.540590 | 1_3:+21194373 | Msa0109260:CDS |
| TGTTGGATTAACTAAAGACT+TGG | 0.541957 | 1_3:-21192280 | None:intergenic |
| AACCCATTAGCATCATTTGG+AGG | 0.542056 | 1_3:-21192246 | None:intergenic |
| TGATTTACTGTCCACTTCAA+GGG | 0.542973 | 1_3:-21192520 | None:intergenic |
| AGAGCAGTAGTGGTGAACAT+TGG | 0.544824 | 1_3:+21194398 | Msa0109260:CDS |
| GACCTGATGGTGTCATTTGT+AGG | 0.552905 | 1_3:+21192604 | Msa0109260:five_prime_UTR |
| TAGGGTTCTTGCCTTTCAGA+AGG | 0.553381 | 1_3:-21194520 | None:intergenic |
| CAGTGAAAGAAACCAAAATG+AGG | 0.556652 | 1_3:-21194460 | None:intergenic |
| AACCTCTAACGATGACTGGA+GGG | 0.560870 | 1_3:-21192403 | None:intergenic |
| AGCAACACAATGGTTCTGGA+TGG | 0.562143 | 1_3:+21194359 | Msa0109260:CDS |
| GTGATGCAAATGGAAATGTT+TGG | 0.566936 | 1_3:+21192739 | Msa0109260:five_prime_UTR |
| AACGAGATGGTGGAGAGAGA+CGG | 0.567285 | 1_3:+21192569 | Msa0109260:five_prime_UTR |
| GACTGGAGGGGTGGAAGTGT+AGG | 0.568589 | 1_3:-21192390 | None:intergenic |
| AATTTCGATCTAAATGCTCA+TGG | 0.570710 | 1_3:+21194271 | Msa0109260:CDS |
| TGGGCCGAGCGTTCAACAGA+TGG | 0.571017 | 1_3:+21194214 | Msa0109260:CDS |
| AATAATGCTAACCTGACGCA+TGG | 0.573117 | 1_3:-21192781 | None:intergenic |
| ATGCTCATGTCTGGCACGAA+AGG | 0.573497 | 1_3:+21193388 | Msa0109260:CDS |
| ATCCAATCCTGTTATCGAGA+AGG | 0.574315 | 1_3:+21192305 | Msa0109260:five_prime_UTR |
| ATATGATCAATCATATACTC+AGG | 0.583609 | 1_3:-21194592 | None:intergenic |
| CTCGAACTACTTCTGCCGCA+TGG | 0.584775 | 1_3:-21192497 | None:intergenic |
| AAATGGGGAAGAAATGGTAA+AGG | 0.588296 | 1_3:+21193255 | Msa0109260:CDS |
| AAGTACGGAAAGAGCAGTAG+TGG | 0.590362 | 1_3:+21194388 | Msa0109260:CDS |
| AAGTCAGGAACACAGAAAGA+TGG | 0.592163 | 1_3:+21192171 | Msa0109260:five_prime_UTR |
| CCTATTGGTGTGAATCCTGA+TGG | 0.594533 | 1_3:+21192546 | Msa0109260:five_prime_UTR |
| AGTGAAAGAAACCAAAATGA+GGG | 0.598165 | 1_3:-21194459 | None:intergenic |
| CAGGGAGAGACATGGTGGGA+AGG | 0.601474 | 1_3:+21194301 | Msa0109260:CDS |
| AGTAGTTCGAGCCCTTGAAG+TGG | 0.603050 | 1_3:+21192509 | Msa0109260:five_prime_UTR |
| GCGTTCAACAGATGGTGGAT+GGG | 0.603310 | 1_3:+21194222 | Msa0109260:CDS |
| GAATGTAGAGTCTCCTTCTG+TGG | 0.604329 | 1_3:+21192440 | Msa0109260:five_prime_UTR |
| GGAATTGAGCAAAGACCTGA+TGG | 0.605980 | 1_3:+21192591 | Msa0109260:five_prime_UTR |
| AGACTCTACATTCGAAGAAG+CGG | 0.610888 | 1_3:-21192430 | None:intergenic |
| GAGCGCTGGAACCGGACTTG+GGG | 0.611983 | 1_3:+21194334 | Msa0109260:CDS |
| GCAACACAATGGTTCTGGAT+GGG | 0.612606 | 1_3:+21194360 | Msa0109260:CDS |
| GAAACATATGACGGGTATGG+TGG | 0.617066 | 1_3:+21194169 | Msa0109260:CDS |
| TCTAACGATGACTGGAGGGG+TGG | 0.618684 | 1_3:-21192399 | None:intergenic |
| GTGCTGACAAAGCTTTAGAG+TGG | 0.618802 | 1_3:+21192649 | Msa0109260:five_prime_UTR |
| GCCAAATTAAGACAACAGAA+TGG | 0.620849 | 1_3:+21194768 | Msa0109260:three_prime_UTR |
| GGTGGGGTGAAACATATGAC+GGG | 0.620853 | 1_3:+21194161 | Msa0109260:intron |
| ATCCTGTTATCGAGAAGGAA+AGG | 0.623492 | 1_3:+21192310 | Msa0109260:five_prime_UTR |
| AATGGAATCAAGAGAGATTG+CGG | 0.628547 | 1_3:-21192336 | None:intergenic |
| AATGCTCATGGCATCAAGCA+GGG | 0.630523 | 1_3:+21194283 | Msa0109260:CDS |
| AGGTGGGGTGAAACATATGA+CGG | 0.630842 | 1_3:+21194160 | Msa0109260:intron |
| GCCGAGCGTTCAACAGATGG+TGG | 0.631424 | 1_3:+21194217 | Msa0109260:CDS |
| TCAAGCAGGGAGAGACATGG+TGG | 0.631506 | 1_3:+21194296 | Msa0109260:CDS |
| ACATGGTGGGAAGGTAAGCA+CGG | 0.635347 | 1_3:+21194310 | Msa0109260:CDS |
| GGTGAAACATATGACGGGTA+TGG | 0.637599 | 1_3:+21194166 | Msa0109260:CDS |
| TGAGCATGCCCAGCATCGAG+GGG | 0.641935 | 1_3:-21193372 | None:intergenic |
| GAACCTCTAACGATGACTGG+AGG | 0.643267 | 1_3:-21192404 | None:intergenic |
| ACCTCTAACGATGACTGGAG+GGG | 0.644048 | 1_3:-21192402 | None:intergenic |
| TTGGTCATGGACACCTCCGG+TGG | 0.645266 | 1_3:+21192212 | Msa0109260:five_prime_UTR |
| GGAGGAACATCACTATCCAC+CGG | 0.646860 | 1_3:-21192228 | None:intergenic |
| ATCCTGATGGAACGAGATGG+TGG | 0.651460 | 1_3:+21192559 | Msa0109260:five_prime_UTR |
| GCATCAAGCAGGGAGAGACA+TGG | 0.651698 | 1_3:+21194293 | Msa0109260:CDS |
| GATGGTGGATGGGAGAAATG+GGG | 0.658644 | 1_3:+21194232 | Msa0109260:CDS |
| CATGAGCATGCCCAGCATCG+AGG | 0.662387 | 1_3:-21193374 | None:intergenic |
| TGCGTTATCTTCCGACCATG+CGG | 0.664436 | 1_3:+21192482 | Msa0109260:five_prime_UTR |
| TGTAGGTGGACAGTGATCAG+AGG | 0.666697 | 1_3:+21192621 | Msa0109260:five_prime_UTR |
| TGGAATCAAGAGAGATTGCG+GGG | 0.668792 | 1_3:-21192334 | None:intergenic |
| GAGAAAACTGCAGATAAATG+GGG | 0.669452 | 1_3:+21193240 | Msa0109260:CDS |
| GAAATGGTAAAGGTGATGAG+TGG | 0.671438 | 1_3:+21193265 | Msa0109260:CDS |
| CAAGCAGGGAGAGACATGGT+GGG | 0.687145 | 1_3:+21194297 | Msa0109260:CDS |
| ACTTGGGGTGAGCAACACAA+TGG | 0.688078 | 1_3:+21194349 | Msa0109260:CDS |
| CTGATGGTGTCATTTGTAGG+TGG | 0.699847 | 1_3:+21192607 | Msa0109260:five_prime_UTR |
| TGAATCCTGATGGAACGAGA+TGG | 0.700722 | 1_3:+21192556 | Msa0109260:five_prime_UTR |
| GGAACATCACTATCCACCGG+AGG | 0.717633 | 1_3:-21192225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAGATAATTATAAATTTT+TGG | - | chr1_3:21193006-21193025 | None:intergenic | 10.0% |
| !!! | AATTTATAATTATCTGAAAT+CGG | + | chr1_3:21193008-21193027 | Msa0109260:intron | 10.0% |
| !!! | GTGTTTTTTGTTAAATTTTT+AGG | + | chr1_3:21193811-21193830 | Msa0109260:intron | 15.0% |
| !! | ATATTATATCTTAAGCAATA+AGG | + | chr1_3:21194088-21194107 | Msa0109260:intron | 15.0% |
| !!! | AAAAGTTCCTATATTTTATA+TGG | - | chr1_3:21194557-21194576 | None:intergenic | 15.0% |
| !! | AATTACATAAATTCACACAA+GGG | - | chr1_3:21193743-21193762 | None:intergenic | 20.0% |
| !! | AAATTACATAAATTCACACA+AGG | - | chr1_3:21193744-21193763 | None:intergenic | 20.0% |
| !! | TTAATTCTCTTGTATGATAT+AGG | + | chr1_3:21193835-21193854 | Msa0109260:intron | 20.0% |
| !! | GGAATAAGTTAGATTAAAAA+GGG | - | chr1_3:21193967-21193986 | None:intergenic | 20.0% |
| !! | TGGAATAAGTTAGATTAAAA+AGG | - | chr1_3:21193968-21193987 | None:intergenic | 20.0% |
| !!! | TTTTAATCTAACTTATTCCA+AGG | + | chr1_3:21193968-21193987 | Msa0109260:intron | 20.0% |
| !!! | TCCTATATTTTATATGGTTT+CGG | - | chr1_3:21194551-21194570 | None:intergenic | 20.0% |
| ! | TCCCTCATAAATAAATTAGT+CGG | + | chr1_3:21193085-21193104 | Msa0109260:intron | 25.0% |
| ! | ACCGACTAATTTATTTATGA+GGG | - | chr1_3:21193089-21193108 | None:intergenic | 25.0% |
| !! | TACCGACTAATTTATTTATG+AGG | - | chr1_3:21193090-21193109 | None:intergenic | 25.0% |
| ! | TCATAGTATTTAGTCCATAA+AGG | + | chr1_3:21193458-21193477 | Msa0109260:intron | 25.0% |
| !!! | AATTCCTTTTTTGCAAACAA+AGG | - | chr1_3:21193521-21193540 | None:intergenic | 25.0% |
| ! | GTATGTATTATCCAAATATG+AGG | + | chr1_3:21193774-21193793 | Msa0109260:intron | 25.0% |
| ! | ACAAAAAACACATAAAGCAA+TGG | - | chr1_3:21193802-21193821 | None:intergenic | 25.0% |
| ! | GCAATATTTATCAAAACCTT+GGG | - | chr1_3:21194022-21194041 | None:intergenic | 25.0% |
| ! | TGCAATATTTATCAAAACCT+TGG | - | chr1_3:21194023-21194042 | None:intergenic | 25.0% |
| ! | CATAAAATACACTGACAAAT+GGG | + | chr1_3:21194195-21194214 | Msa0109260:CDS | 25.0% |
| ! | ATATGATCAATCATATACTC+AGG | - | chr1_3:21194595-21194614 | None:intergenic | 25.0% |
| TGTTGGATTAACTAAAGACT+TGG | - | chr1_3:21192283-21192302 | None:intergenic | 30.0% | |
| ATAACAGGATTGGATAATGT+TGG | - | chr1_3:21192300-21192319 | None:intergenic | 30.0% | |
| TGAGTAAGTAAACTCTCAAA+TGG | - | chr1_3:21192357-21192376 | None:intergenic | 30.0% | |
| TAGAAGAGCTTAAGAAACAT+TGG | - | chr1_3:21193050-21193069 | None:intergenic | 30.0% | |
| ! | ATACTGAGCATGATTTTCAA+TGG | + | chr1_3:21193193-21193212 | Msa0109260:intron | 30.0% |
| GGACTAAATACTATGAAAAG+AGG | - | chr1_3:21193454-21193473 | None:intergenic | 30.0% | |
| GAAAGATCACTAAACCTTTA+TGG | - | chr1_3:21193475-21193494 | None:intergenic | 30.0% | |
| ! | GATTCCTTTGTTTGCAAAAA+AGG | + | chr1_3:21193514-21193533 | Msa0109260:intron | 30.0% |
| CAAGATATAAACATGTCTCA+TGG | + | chr1_3:21193595-21193614 | Msa0109260:intron | 30.0% | |
| TCTTGTATGATATAGGCAAA+AGG | + | chr1_3:21193842-21193861 | Msa0109260:intron | 30.0% | |
| ATTTATCAAAACCTTGGGTA+AGG | - | chr1_3:21194017-21194036 | None:intergenic | 30.0% | |
| AAATATTGCAAATAGCTTCC+TGG | + | chr1_3:21194033-21194052 | Msa0109260:intron | 30.0% | |
| GCATAAAATACACTGACAAA+TGG | + | chr1_3:21194194-21194213 | Msa0109260:CDS | 30.0% | |
| AATTTCGATCTAAATGCTCA+TGG | + | chr1_3:21194271-21194290 | Msa0109260:CDS | 30.0% | |
| ! | TATGAAAGATTCCCTCATTT+TGG | + | chr1_3:21194448-21194467 | Msa0109260:CDS | 30.0% |
| AGTGAAAGAAACCAAAATGA+GGG | - | chr1_3:21194462-21194481 | None:intergenic | 30.0% | |
| AAGTACAAAAACCTTCTGAA+AGG | + | chr1_3:21194509-21194528 | Msa0109260:CDS | 30.0% | |
| TATATGGTTTCGGCAAATTA+GGG | - | chr1_3:21194541-21194560 | None:intergenic | 30.0% | |
| TTATATGGTTTCGGCAAATT+AGG | - | chr1_3:21194542-21194561 | None:intergenic | 30.0% | |
| GCCGAAACCATATAAAATAT+AGG | + | chr1_3:21194547-21194566 | Msa0109260:three_prime_UTR | 30.0% | |
| CTTACAATTTATGCAGAAAG+TGG | + | chr1_3:21194674-21194693 | Msa0109260:three_prime_UTR | 30.0% | |
| ACCATTCTGTTGTCTTAATT+TGG | - | chr1_3:21194772-21194791 | None:intergenic | 30.0% | |
| !! | AGTATTTTTGTGCAAGAGTC+CGG | + | chr1_3:21192120-21192139 | Msa0109260:five_prime_UTR | 35.0% |
| TTCCTCCAAATGATGCTAAT+GGG | + | chr1_3:21192244-21192263 | Msa0109260:five_prime_UTR | 35.0% | |
| TTCAACCCATTAGCATCATT+TGG | - | chr1_3:21192252-21192271 | None:intergenic | 35.0% | |
| AATGGAATCAAGAGAGATTG+CGG | - | chr1_3:21192339-21192358 | None:intergenic | 35.0% | |
| TGATTTACTGTCCACTTCAA+GGG | - | chr1_3:21192523-21192542 | None:intergenic | 35.0% | |
| ATGATTTACTGTCCACTTCA+AGG | - | chr1_3:21192524-21192543 | None:intergenic | 35.0% | |
| GACAGTAAATCATCACCTAT+TGG | + | chr1_3:21192531-21192550 | Msa0109260:five_prime_UTR | 35.0% | |
| TTCTGATGAGTTTGGCTATA+AGG | + | chr1_3:21192692-21192711 | Msa0109260:five_prime_UTR | 35.0% | |
| GTGATGCAAATGGAAATGTT+TGG | + | chr1_3:21192739-21192758 | Msa0109260:five_prime_UTR | 35.0% | |
| ! | GAAATGTTTGGCGTGAATTT+TGG | + | chr1_3:21192751-21192770 | Msa0109260:five_prime_UTR | 35.0% |
| TCACCTGAAAACTAAGTGAT+TGG | + | chr1_3:21192849-21192868 | Msa0109260:intron | 35.0% | |
| !! | AGACCAATCACTTAGTTTTC+AGG | - | chr1_3:21192855-21192874 | None:intergenic | 35.0% |
| !! | TGGTCAATGGACTATACTTA+AGG | + | chr1_3:21192879-21192898 | Msa0109260:intron | 35.0% |
| TACTTAAGGTCGAATCAATC+AGG | + | chr1_3:21192893-21192912 | Msa0109260:intron | 35.0% | |
| ! | AGAAACATTGGCTACAAGAA+TGG | - | chr1_3:21193038-21193057 | None:intergenic | 35.0% |
| CTTATGAACCTACAGAGTAT+TGG | + | chr1_3:21193154-21193173 | Msa0109260:intron | 35.0% | |
| ! | GATTTTCAATGGCAGGAAAA+CGG | + | chr1_3:21193204-21193223 | Msa0109260:intron | 35.0% |
| ! | ATTTTCAATGGCAGGAAAAC+GGG | + | chr1_3:21193205-21193224 | Msa0109260:intron | 35.0% |
| TGGAGAAAACTGCAGATAAA+TGG | + | chr1_3:21193238-21193257 | Msa0109260:CDS | 35.0% | |
| GGAGAAAACTGCAGATAAAT+GGG | + | chr1_3:21193239-21193258 | Msa0109260:CDS | 35.0% | |
| GAGAAAACTGCAGATAAATG+GGG | + | chr1_3:21193240-21193259 | Msa0109260:CDS | 35.0% | |
| AAATGGGGAAGAAATGGTAA+AGG | + | chr1_3:21193255-21193274 | Msa0109260:CDS | 35.0% | |
| AAGCAATGGAACCTCATATT+TGG | - | chr1_3:21193788-21193807 | None:intergenic | 35.0% | |
| TGCATACAAAAAGCAGAAGT+TGG | - | chr1_3:21193870-21193889 | None:intergenic | 35.0% | |
| GATTAAAAAGGGAAGCAAAG+TGG | - | chr1_3:21193956-21193975 | None:intergenic | 35.0% | |
| CAGTGAAAGAAACCAAAATG+AGG | - | chr1_3:21194463-21194482 | None:intergenic | 35.0% | |
| !! | CTTTCACTGCTTTGAAAACT+CGG | + | chr1_3:21194474-21194493 | Msa0109260:CDS | 35.0% |
| ! | CTGAAAGTGTAAGGAATGAA+TGG | + | chr1_3:21194624-21194643 | Msa0109260:three_prime_UTR | 35.0% |
| GCCAAATTAAGACAACAGAA+TGG | + | chr1_3:21194768-21194787 | Msa0109260:three_prime_UTR | 35.0% | |
| AAGAGTCCGGAACACAAAAT+GGG | + | chr1_3:21192133-21192152 | Msa0109260:five_prime_UTR | 40.0% | |
| ! | AAGAGTCCCATTTTGTGTTC+CGG | - | chr1_3:21192142-21192161 | None:intergenic | 40.0% |
| ! | ACTCTTTTTGTGCCAAAGTC+AGG | + | chr1_3:21192156-21192175 | Msa0109260:five_prime_UTR | 40.0% |
| TCTTTCTGTGTTCCTGACTT+TGG | - | chr1_3:21192171-21192190 | None:intergenic | 40.0% | |
| AAGTCAGGAACACAGAAAGA+TGG | + | chr1_3:21192171-21192190 | Msa0109260:five_prime_UTR | 40.0% | |
| ATGACCAAAAATCAGGACCT+GGG | - | chr1_3:21192200-21192219 | None:intergenic | 40.0% | |
| GTTCCTCCAAATGATGCTAA+TGG | + | chr1_3:21192243-21192262 | Msa0109260:five_prime_UTR | 40.0% | |
| AACCCATTAGCATCATTTGG+AGG | - | chr1_3:21192249-21192268 | None:intergenic | 40.0% | |
| ATCCAATCCTGTTATCGAGA+AGG | + | chr1_3:21192305-21192324 | Msa0109260:five_prime_UTR | 40.0% | |
| TTCCTTCTCGATAACAGGAT+TGG | - | chr1_3:21192310-21192329 | None:intergenic | 40.0% | |
| ATCCTGTTATCGAGAAGGAA+AGG | + | chr1_3:21192310-21192329 | Msa0109260:five_prime_UTR | 40.0% | |
| ATGGAATCAAGAGAGATTGC+GGG | - | chr1_3:21192338-21192357 | None:intergenic | 40.0% | |
| TTTGAACCTCTAACGATGAC+TGG | - | chr1_3:21192410-21192429 | None:intergenic | 40.0% | |
| AGACTCTACATTCGAAGAAG+CGG | - | chr1_3:21192433-21192452 | None:intergenic | 40.0% | |
| ! | TTCTTTTCCTCTTCCACAGA+AGG | - | chr1_3:21192456-21192475 | None:intergenic | 40.0% |
| ! | TAGAGTGGCAAGAGAAGTTT+TGG | + | chr1_3:21192664-21192683 | Msa0109260:five_prime_UTR | 40.0% |
| ! | AGAGTGGCAAGAGAAGTTTT+GGG | + | chr1_3:21192665-21192684 | Msa0109260:five_prime_UTR | 40.0% |
| GAGTTTGGCTATAAGGAACT+TGG | + | chr1_3:21192699-21192718 | Msa0109260:five_prime_UTR | 40.0% | |
| TGGCTATAAGGAACTTGGTT+CGG | + | chr1_3:21192704-21192723 | Msa0109260:five_prime_UTR | 40.0% | |
| AAATCTGGACGTGATGCAAA+TGG | + | chr1_3:21192729-21192748 | Msa0109260:five_prime_UTR | 40.0% | |
| AATAATGCTAACCTGACGCA+TGG | - | chr1_3:21192784-21192803 | None:intergenic | 40.0% | |
| !! | ACTAAGTGATTGGTCTCAAG+TGG | + | chr1_3:21192859-21192878 | Msa0109260:intron | 40.0% |
| TTTCAGCCAGGGAACAAATT+CGG | - | chr1_3:21192923-21192942 | None:intergenic | 40.0% | |
| GCTAAAGATTGTTTCAGCCA+GGG | - | chr1_3:21192934-21192953 | None:intergenic | 40.0% | |
| AGCTAAAGATTGTTTCAGCC+AGG | - | chr1_3:21192935-21192954 | None:intergenic | 40.0% | |
| TAAGATTCATGAACGCACCA+AGG | - | chr1_3:21193138-21193157 | None:intergenic | 40.0% | |
| ! | TGAAGCATCCAATACTCTGT+AGG | - | chr1_3:21193165-21193184 | None:intergenic | 40.0% |
| ! | TGAGCATGATTTTCAATGGC+AGG | + | chr1_3:21193197-21193216 | Msa0109260:intron | 40.0% |
| GCAGATAAATGGGGAAGAAA+TGG | + | chr1_3:21193249-21193268 | Msa0109260:CDS | 40.0% | |
| GAAATGGTAAAGGTGATGAG+TGG | + | chr1_3:21193265-21193284 | Msa0109260:CDS | 40.0% | |
| TTCGAACACTACAATGCATC+TGG | + | chr1_3:21193300-21193319 | Msa0109260:CDS | 40.0% | |
| ATCTGGTCAAGCTGAGAAAT+GGG | + | chr1_3:21193317-21193336 | Msa0109260:CDS | 40.0% | |
| !! | ATCGCAAATGAGCATTGAGT+GGG | - | chr1_3:21193556-21193575 | None:intergenic | 40.0% |
| AAAAAGGGAAGCAAAGTGGA+GGG | - | chr1_3:21193952-21193971 | None:intergenic | 40.0% | |
| TAAAAAGGGAAGCAAAGTGG+AGG | - | chr1_3:21193953-21193972 | None:intergenic | 40.0% | |
| ! | CAAAACCTTGGGTAAGGTTT+TGG | - | chr1_3:21194011-21194030 | None:intergenic | 40.0% |
| TTGTGATCTGTTCCTTTGTC+AGG | + | chr1_3:21194140-21194159 | Msa0109260:intron | 40.0% | |
| CACACGAAATGCAAGATACT+TGG | + | chr1_3:21194425-21194444 | Msa0109260:CDS | 40.0% | |
| TTGAAAACTCGGTTCAACTC+AGG | + | chr1_3:21194485-21194504 | Msa0109260:CDS | 40.0% | |
| TGAAAACTCGGTTCAACTCA+GGG | + | chr1_3:21194486-21194505 | Msa0109260:CDS | 40.0% | |
| ! | CAAGCTCTTCTGAAAGTGTA+AGG | + | chr1_3:21194615-21194634 | Msa0109260:three_prime_UTR | 40.0% |
| CAAGAGTCCGGAACACAAAA+TGG | + | chr1_3:21192132-21192151 | Msa0109260:five_prime_UTR | 45.0% | |
| ACACAGAAAGATGGTATCCC+AGG | + | chr1_3:21192180-21192199 | Msa0109260:five_prime_UTR | 45.0% | |
| ! | GTATCCCAGGTCCTGATTTT+TGG | + | chr1_3:21192193-21192212 | Msa0109260:five_prime_UTR | 45.0% |
| CATGACCAAAAATCAGGACC+TGG | - | chr1_3:21192201-21192220 | None:intergenic | 45.0% | |
| !!! | CAGGTCCTGATTTTTGGTCA+TGG | + | chr1_3:21192199-21192218 | Msa0109260:five_prime_UTR | 45.0% |
| GGTGTCCATGACCAAAAATC+AGG | - | chr1_3:21192207-21192226 | None:intergenic | 45.0% | |
| !! | TTTTTGGTCATGGACACCTC+CGG | + | chr1_3:21192209-21192228 | Msa0109260:five_prime_UTR | 45.0% |
| GACCTTTCCTTCTCGATAAC+AGG | - | chr1_3:21192315-21192334 | None:intergenic | 45.0% | |
| TGGAATCAAGAGAGATTGCG+GGG | - | chr1_3:21192337-21192356 | None:intergenic | 45.0% | |
| AACCTCTAACGATGACTGGA+GGG | - | chr1_3:21192406-21192425 | None:intergenic | 45.0% | |
| GAATGTAGAGTCTCCTTCTG+TGG | + | chr1_3:21192440-21192459 | Msa0109260:five_prime_UTR | 45.0% | |
| CCATCAGGATTCACACCAAT+AGG | - | chr1_3:21192549-21192568 | None:intergenic | 45.0% | |
| CCTATTGGTGTGAATCCTGA+TGG | + | chr1_3:21192546-21192565 | Msa0109260:five_prime_UTR | 45.0% | |
| TGAATCCTGATGGAACGAGA+TGG | + | chr1_3:21192556-21192575 | Msa0109260:five_prime_UTR | 45.0% | |
| GGAATTGAGCAAAGACCTGA+TGG | + | chr1_3:21192591-21192610 | Msa0109260:five_prime_UTR | 45.0% | |
| !! | GACCTGATGGTGTCATTTGT+AGG | + | chr1_3:21192604-21192623 | Msa0109260:five_prime_UTR | 45.0% |
| CACCTACAAATGACACCATC+AGG | - | chr1_3:21192609-21192628 | None:intergenic | 45.0% | |
| !! | CTGATGGTGTCATTTGTAGG+TGG | + | chr1_3:21192607-21192626 | Msa0109260:five_prime_UTR | 45.0% |
| !! | GTGCTGACAAAGCTTTAGAG+TGG | + | chr1_3:21192649-21192668 | Msa0109260:five_prime_UTR | 45.0% |
| !! | GAACTTGGTTCGGAGAAATC+TGG | + | chr1_3:21192714-21192733 | Msa0109260:five_prime_UTR | 45.0% |
| !! | GATTGGTCTCAAGTGGTCAA+TGG | + | chr1_3:21192866-21192885 | Msa0109260:intron | 45.0% |
| ! | GCTAGACTTTTCTTACCTCC+TGG | + | chr1_3:21192952-21192971 | Msa0109260:intron | 45.0% |
| ! | ACCCTCTTGTTTCCTGAGTT+CGG | - | chr1_3:21192978-21192997 | None:intergenic | 45.0% |
| TCCTTTGCAAACTGTAGCCT+TGG | + | chr1_3:21193118-21193137 | Msa0109260:intron | 45.0% | |
| ACCAAGGCTACAGTTTGCAA+AGG | - | chr1_3:21193122-21193141 | None:intergenic | 45.0% | |
| GTGATGAGTGGCAGGAAAAT+TGG | + | chr1_3:21193277-21193296 | Msa0109260:CDS | 45.0% | |
| CATCTGGTCAAGCTGAGAAA+TGG | + | chr1_3:21193316-21193335 | Msa0109260:CDS | 45.0% | |
| CTGAGAAATGGGCACACAAA+TGG | + | chr1_3:21193328-21193347 | Msa0109260:CDS | 45.0% | |
| !! | CATCGCAAATGAGCATTGAG+TGG | - | chr1_3:21193557-21193576 | None:intergenic | 45.0% |
| CACTCAATGCTCATTTGCGA+TGG | + | chr1_3:21193555-21193574 | Msa0109260:intron | 45.0% | |
| !! | AACCTTGGGTAAGGTTTTGG+AGG | - | chr1_3:21194008-21194027 | None:intergenic | 45.0% |
| GTTAACTCGCAGATTCTTCC+AGG | - | chr1_3:21194054-21194073 | None:intergenic | 45.0% | |
| TGATCTGTTCCTTTGTCAGG+TGG | + | chr1_3:21194143-21194162 | Msa0109260:intron | 45.0% | |
| GATCTGTTCCTTTGTCAGGT+GGG | + | chr1_3:21194144-21194163 | Msa0109260:intron | 45.0% | |
| ATCTGTTCCTTTGTCAGGTG+GGG | + | chr1_3:21194145-21194164 | Msa0109260:intron | 45.0% | |
| AGGTGGGGTGAAACATATGA+CGG | + | chr1_3:21194160-21194179 | Msa0109260:intron | 45.0% | |
| !! | GGTGAAACATATGACGGGTA+TGG | + | chr1_3:21194166-21194185 | Msa0109260:CDS | 45.0% |
| !! | GAAACATATGACGGGTATGG+TGG | + | chr1_3:21194169-21194188 | Msa0109260:CDS | 45.0% |
| !! | AGATGGTGGATGGGAGAAAT+GGG | + | chr1_3:21194231-21194250 | Msa0109260:CDS | 45.0% |
| AAATGCTCATGGCATCAAGC+AGG | + | chr1_3:21194282-21194301 | Msa0109260:CDS | 45.0% | |
| AATGCTCATGGCATCAAGCA+GGG | + | chr1_3:21194283-21194302 | Msa0109260:CDS | 45.0% | |
| !! | AGCAACACAATGGTTCTGGA+TGG | + | chr1_3:21194359-21194378 | Msa0109260:CDS | 45.0% |
| !! | GCAACACAATGGTTCTGGAT+GGG | + | chr1_3:21194360-21194379 | Msa0109260:CDS | 45.0% |
| ! | TCTGGATGGGTTCACAAGTA+CGG | + | chr1_3:21194373-21194392 | Msa0109260:CDS | 45.0% |
| AAGTACGGAAAGAGCAGTAG+TGG | + | chr1_3:21194388-21194407 | Msa0109260:CDS | 45.0% | |
| AGAGCAGTAGTGGTGAACAT+TGG | + | chr1_3:21194398-21194417 | Msa0109260:CDS | 45.0% | |
| GAGCAGTAGTGGTGAACATT+GGG | + | chr1_3:21194399-21194418 | Msa0109260:CDS | 45.0% | |
| TAGGGTTCTTGCCTTTCAGA+AGG | - | chr1_3:21194523-21194542 | None:intergenic | 45.0% | |
| GGAGGAACATCACTATCCAC+CGG | - | chr1_3:21192231-21192250 | None:intergenic | 50.0% | |
| ACCTCTAACGATGACTGGAG+GGG | - | chr1_3:21192405-21192424 | None:intergenic | 50.0% | |
| GAACCTCTAACGATGACTGG+AGG | - | chr1_3:21192407-21192426 | None:intergenic | 50.0% | |
| AGAGTCTCCTTCTGTGGAAG+AGG | + | chr1_3:21192446-21192465 | Msa0109260:five_prime_UTR | 50.0% | |
| TGCGTTATCTTCCGACCATG+CGG | + | chr1_3:21192482-21192501 | Msa0109260:five_prime_UTR | 50.0% | |
| AACTACTTCTGCCGCATGGT+CGG | - | chr1_3:21192496-21192515 | None:intergenic | 50.0% | |
| AGTAGTTCGAGCCCTTGAAG+TGG | + | chr1_3:21192509-21192528 | Msa0109260:five_prime_UTR | 50.0% | |
| ATCCTGATGGAACGAGATGG+TGG | + | chr1_3:21192559-21192578 | Msa0109260:five_prime_UTR | 50.0% | |
| !! | AACGAGATGGTGGAGAGAGA+CGG | + | chr1_3:21192569-21192588 | Msa0109260:five_prime_UTR | 50.0% |
| TGTAGGTGGACAGTGATCAG+AGG | + | chr1_3:21192621-21192640 | Msa0109260:five_prime_UTR | 50.0% | |
| !!! | GTGGCAAGAGAAGTTTTGGG+AGG | + | chr1_3:21192668-21192687 | Msa0109260:five_prime_UTR | 50.0% |
| TGGGAGGCTTCTGATGAGTT+TGG | + | chr1_3:21192684-21192703 | Msa0109260:five_prime_UTR | 50.0% | |
| TTGGAGAGAATCCATGCGTC+AGG | + | chr1_3:21192770-21192789 | Msa0109260:exon | 50.0% | |
| ! | GGAACACCGAATTTGTTCCC+TGG | + | chr1_3:21192914-21192933 | Msa0109260:intron | 50.0% |
| GCCGAACTCAGGAAACAAGA+GGG | + | chr1_3:21192974-21192993 | Msa0109260:intron | 50.0% | |
| !! | GGAAAACGGGCTACTGCATA+TGG | + | chr1_3:21193218-21193237 | Msa0109260:intron | 50.0% |
| TGGTAAAGGTGATGAGTGGC+AGG | + | chr1_3:21193269-21193288 | Msa0109260:CDS | 50.0% | |
| ATGCTCATGTCTGGCACGAA+AGG | + | chr1_3:21193388-21193407 | Msa0109260:CDS | 50.0% | |
| !!! | AGGTTTTGGAGGCTGACACA+GGG | - | chr1_3:21193997-21194016 | None:intergenic | 50.0% |
| !!! | AAGGTTTTGGAGGCTGACAC+AGG | - | chr1_3:21193998-21194017 | None:intergenic | 50.0% |
| AGCCTCCAAAACCTTACCCA+AGG | + | chr1_3:21194003-21194022 | Msa0109260:intron | 50.0% | |
| TGTTTCACCCCACCTGACAA+AGG | - | chr1_3:21194155-21194174 | None:intergenic | 50.0% | |
| GGTGGGGTGAAACATATGAC+GGG | + | chr1_3:21194161-21194180 | Msa0109260:intron | 50.0% | |
| TCCACCATCTGTTGAACGCT+CGG | - | chr1_3:21194221-21194240 | None:intergenic | 50.0% | |
| !! | AGCGTTCAACAGATGGTGGA+TGG | + | chr1_3:21194221-21194240 | Msa0109260:CDS | 50.0% |
| !! | GCGTTCAACAGATGGTGGAT+GGG | + | chr1_3:21194222-21194241 | Msa0109260:CDS | 50.0% |
| !! | CAGATGGTGGATGGGAGAAA+TGG | + | chr1_3:21194230-21194249 | Msa0109260:CDS | 50.0% |
| !! | GATGGTGGATGGGAGAAATG+GGG | + | chr1_3:21194232-21194251 | Msa0109260:CDS | 50.0% |
| GGAGAAATGGGGCGACAAAT+GGG | + | chr1_3:21194243-21194262 | Msa0109260:CDS | 50.0% | |
| ! | ACATGGTGGGAAGGTAAGCA+CGG | + | chr1_3:21194310-21194329 | Msa0109260:CDS | 50.0% |
| ACTTGGGGTGAGCAACACAA+TGG | + | chr1_3:21194349-21194368 | Msa0109260:CDS | 50.0% | |
| GGTGAGCAACACAATGGTTC+TGG | + | chr1_3:21194355-21194374 | Msa0109260:CDS | 50.0% | |
| GGAACATCACTATCCACCGG+AGG | - | chr1_3:21192228-21192247 | None:intergenic | 55.0% | |
| TCTAACGATGACTGGAGGGG+TGG | - | chr1_3:21192402-21192421 | None:intergenic | 55.0% | |
| ACCCCTCCAGTCATCGTTAG+AGG | + | chr1_3:21192401-21192420 | Msa0109260:five_prime_UTR | 55.0% | |
| CTCGAACTACTTCTGCCGCA+TGG | - | chr1_3:21192500-21192519 | None:intergenic | 55.0% | |
| CTCCACCATCTCGTTCCATC+AGG | - | chr1_3:21192564-21192583 | None:intergenic | 55.0% | |
| !! | ACGAGATGGTGGAGAGAGAC+GGG | + | chr1_3:21192570-21192589 | Msa0109260:five_prime_UTR | 55.0% |
| CTTGTTTCCTGAGTTCGGCC+AGG | - | chr1_3:21192973-21192992 | None:intergenic | 55.0% | |
| GGCCGAACTCAGGAAACAAG+AGG | + | chr1_3:21192973-21192992 | Msa0109260:intron | 55.0% | |
| ! | CAGCATCGAGGGGTGTGTTT+GGG | - | chr1_3:21193365-21193384 | None:intergenic | 55.0% |
| CAAACACACCCCTCGATGCT+GGG | + | chr1_3:21193364-21193383 | Msa0109260:CDS | 55.0% | |
| ! | ATGAGCATGCCCAGCATCGA+GGG | - | chr1_3:21193376-21193395 | None:intergenic | 55.0% |
| ATGCTGGGCATGCTCATGTC+TGG | + | chr1_3:21193379-21193398 | Msa0109260:CDS | 55.0% | |
| AGGGAAGCAAAGTGGAGGGT+GGG | - | chr1_3:21193948-21193967 | None:intergenic | 55.0% | |
| AAGGGAAGCAAAGTGGAGGG+TGG | - | chr1_3:21193949-21193968 | None:intergenic | 55.0% | |
| GGGAGAAATGGGGCGACAAA+TGG | + | chr1_3:21194242-21194261 | Msa0109260:CDS | 55.0% | |
| GCATCAAGCAGGGAGAGACA+TGG | + | chr1_3:21194293-21194312 | Msa0109260:CDS | 55.0% | |
| TCAAGCAGGGAGAGACATGG+TGG | + | chr1_3:21194296-21194315 | Msa0109260:CDS | 55.0% | |
| CAAGCAGGGAGAGACATGGT+GGG | + | chr1_3:21194297-21194316 | Msa0109260:CDS | 55.0% | |
| ! | TGTGTTGCTCACCCCAAGTC+CGG | - | chr1_3:21194348-21194367 | None:intergenic | 55.0% |
| TTGGTCATGGACACCTCCGG+TGG | + | chr1_3:21192212-21192231 | Msa0109260:five_prime_UTR | 60.0% | |
| ! | GACTGGAGGGGTGGAAGTGT+AGG | - | chr1_3:21192393-21192412 | None:intergenic | 60.0% |
| CTTACCTCCTGGCCGAACTC+AGG | + | chr1_3:21192963-21192982 | Msa0109260:intron | 60.0% | |
| GTTTCCTGAGTTCGGCCAGG+AGG | - | chr1_3:21192970-21192989 | None:intergenic | 60.0% | |
| ! | CCAGCATCGAGGGGTGTGTT+TGG | - | chr1_3:21193366-21193385 | None:intergenic | 60.0% |
| CCAAACACACCCCTCGATGC+TGG | + | chr1_3:21193363-21193382 | Msa0109260:CDS | 60.0% | |
| ! | TGAGCATGCCCAGCATCGAG+GGG | - | chr1_3:21193375-21193394 | None:intergenic | 60.0% |
| CATGAGCATGCCCAGCATCG+AGG | - | chr1_3:21193377-21193396 | None:intergenic | 60.0% | |
| AGGCTGACACAGGGTAGCCT+TGG | - | chr1_3:21193988-21194007 | None:intergenic | 60.0% | |
| TGGGCCGAGCGTTCAACAGA+TGG | + | chr1_3:21194214-21194233 | Msa0109260:CDS | 60.0% | |
| GCCGAGCGTTCAACAGATGG+TGG | + | chr1_3:21194217-21194236 | Msa0109260:CDS | 60.0% | |
| ! | CAGGGAGAGACATGGTGGGA+AGG | + | chr1_3:21194301-21194320 | Msa0109260:CDS | 60.0% |
| ! | AAGGTAAGCACGGAGAGCGC+TGG | + | chr1_3:21194320-21194339 | Msa0109260:CDS | 60.0% |
| !! | AGAGCGCTGGAACCGGACTT+GGG | + | chr1_3:21194333-21194352 | Msa0109260:CDS | 60.0% |
| !! | AGCACGGAGAGCGCTGGAAC+CGG | + | chr1_3:21194326-21194345 | Msa0109260:CDS | 65.0% |
| !! | GAGAGCGCTGGAACCGGACT+TGG | + | chr1_3:21194332-21194351 | Msa0109260:CDS | 65.0% |
| !! | GAGCGCTGGAACCGGACTTG+GGG | + | chr1_3:21194334-21194353 | Msa0109260:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 21192093 | 21194794 | 21192093 | ID=Msa0109260;Name=Msa0109260 |
| chr1_3 | mRNA | 21192093 | 21194794 | 21192093 | ID=Msa0109260-mRNA-1;Parent=Msa0109260;Name=Msa0109260-mRNA-1;_AED=0.00;_eAED=0.00;_QI=690|1|1|1|1|1|3|251|193 |
| chr1_3 | exon | 21192093 | 21192791 | 21192093 | ID=Msa0109260-mRNA-1:exon:7588;Parent=Msa0109260-mRNA-1 |
| chr1_3 | exon | 21193219 | 21193409 | 21193219 | ID=Msa0109260-mRNA-1:exon:7589;Parent=Msa0109260-mRNA-1 |
| chr1_3 | exon | 21194162 | 21194794 | 21194162 | ID=Msa0109260-mRNA-1:exon:7590;Parent=Msa0109260-mRNA-1 |
| chr1_3 | five_prime_UTR | 21192093 | 21192782 | 21192093 | ID=Msa0109260-mRNA-1:five_prime_utr;Parent=Msa0109260-mRNA-1 |
| chr1_3 | CDS | 21192783 | 21192791 | 21192783 | ID=Msa0109260-mRNA-1:cds;Parent=Msa0109260-mRNA-1 |
| chr1_3 | CDS | 21193219 | 21193409 | 21193219 | ID=Msa0109260-mRNA-1:cds;Parent=Msa0109260-mRNA-1 |
| chr1_3 | CDS | 21194162 | 21194543 | 21194162 | ID=Msa0109260-mRNA-1:cds;Parent=Msa0109260-mRNA-1 |
| chr1_3 | three_prime_UTR | 21194544 | 21194794 | 21194544 | ID=Msa0109260-mRNA-1:three_prime_utr;Parent=Msa0109260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
