AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0797810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797810 MtrunA17_Chr5g0424201 94.065 337 19 1 1 337 1 336 0.0 655
Msa0797810 MtrunA17_Chr5g0424211 82.596 339 54 4 1 337 1 336 0.0 549
Msa0797810 MtrunA17_Chr3g0114871 69.784 278 76 2 5 282 6 275 3.24e-143 405
Msa0797810 MtrunA17_Chr3g0114861 49.112 338 164 5 1 337 1 331 1.07e-102 305
Msa0797810 MtrunA17_Chr5g0398291 39.412 340 190 6 5 332 7 342 1.26e-78 244
Msa0797810 MtrunA17_Chr7g0242551 36.795 337 195 8 3 327 12 342 2.88e-70 223
Msa0797810 MtrunA17_Chr7g0239111 36.991 319 191 6 20 334 31 343 1.89e-66 213
Msa0797810 MtrunA17_Chr5g0437181 34.036 332 206 6 3 327 11 336 4.73e-65 209
Msa0797810 MtrunA17_Chr3g0113641 33.735 332 207 5 3 327 12 337 2.49e-64 207
Msa0797810 MtrunA17_Chr7g0239101 35.202 321 198 6 18 334 29 343 1.17e-63 206
Msa0797810 MtrunA17_Chr4g0006371 35.043 351 200 10 3 331 11 355 4.34e-63 204
Msa0797810 MtrunA17_Chr7g0239121 35.737 319 196 7 20 334 27 340 9.69e-63 203
Msa0797810 MtrunA17_Chr7g0239821 35.737 319 195 6 20 334 40 352 1.25e-62 203
Msa0797810 MtrunA17_Chr2g0296371 36.593 317 186 7 19 327 27 336 1.56e-61 200
Msa0797810 MtrunA17_Chr3g0126741 35.562 329 197 7 10 331 25 345 2.84e-61 200
Msa0797810 MtrunA17_Chr8g0345831 37.224 317 178 7 20 329 18 320 4.96e-60 196
Msa0797810 MtrunA17_Chr3g0145171 35.507 276 168 5 42 311 50 321 1.21e-59 195
Msa0797810 MtrunA17_Chr4g0064781 37.586 290 171 7 44 329 50 333 6.20e-59 193
Msa0797810 MtrunA17_Chr8g0370721 35.495 293 176 8 42 328 50 335 7.94e-58 191
Msa0797810 MtrunA17_Chr5g0412651 34.405 311 195 5 24 328 19 326 9.80e-58 190
Msa0797810 MtrunA17_Chr5g0412671 36.082 291 178 4 44 328 38 326 2.46e-57 189
Msa0797810 MtrunA17_Chr3g0128001 36.624 314 186 8 18 327 13 317 2.66e-56 186
Msa0797810 MtrunA17_Chr5g0412681 35.034 294 176 8 44 330 33 318 6.21e-56 185
Msa0797810 MtrunA17_Chr5g0423251 31.595 326 212 7 6 327 10 328 4.85e-55 183
Msa0797810 MtrunA17_Chr3g0109041 30.409 342 225 6 2 336 6 341 7.75e-55 182
Msa0797810 MtrunA17_Chr7g0239071 36.170 282 173 5 49 328 6 282 7.77e-55 181
Msa0797810 MtrunA17_Chr7g0265221 32.727 330 195 8 20 328 38 361 1.06e-54 183
Msa0797810 MtrunA17_Chr7g0250511 33.742 326 195 8 13 328 18 332 2.25e-54 181
Msa0797810 MtrunA17_Chr3g0145181 32.441 299 192 6 42 333 47 342 2.60e-54 181
Msa0797810 MtrunA17_Chr7g0232161 35.106 282 174 5 4 281 20 296 3.28e-54 180
Msa0797810 MtrunA17_Chr4g0050031 33.557 298 183 6 44 333 62 352 3.69e-54 181
Msa0797810 MtrunA17_Chr1g0179801 33.436 326 191 9 20 328 38 354 4.47e-54 181
Msa0797810 MtrunA17_Chr8g0370711 34.932 292 177 8 42 327 50 334 7.50e-54 180
Msa0797810 MtrunA17_Chr5g0426891 34.906 318 192 7 18 328 14 323 9.70e-54 179
Msa0797810 MtrunA17_Chr1g0184111 31.348 319 211 5 13 328 7 320 1.02e-53 179
Msa0797810 MtrunA17_Chr8g0375671 32.249 338 212 7 2 328 11 342 2.95e-53 179
Msa0797810 MtrunA17_Chr5g0421041 32.317 328 209 7 4 327 8 326 4.04e-53 178
Msa0797810 MtrunA17_Chr8g0375701 34.161 322 192 8 20 331 31 342 4.70e-53 178
Msa0797810 MtrunA17_Chr5g0420981 32.166 314 199 7 4 310 13 319 6.75e-53 178
Msa0797810 MtrunA17_Chr1g0184161 30.721 319 212 5 19 334 14 326 2.30e-52 176
Msa0797810 MtrunA17_Chr8g0371931 33.876 307 189 6 6 305 4 303 7.71e-52 175
Msa0797810 MtrunA17_Chr7g0220011 33.538 325 199 8 18 336 14 327 8.18e-52 174
Msa0797810 MtrunA17_Chr5g0423191 30.303 330 215 8 4 327 8 328 1.08e-51 174
Msa0797810 MtrunA17_Chr1g0184121 30.094 319 215 5 13 328 7 320 1.38e-51 174
Msa0797810 MtrunA17_Chr1g0162191 32.416 327 209 7 7 327 10 330 4.68e-51 173
Msa0797810 MtrunA17_Chr3g0145201 32.441 299 192 6 42 333 682 977 9.86e-51 181
Msa0797810 MtrunA17_Chr8g0371921 33.550 307 190 6 6 305 4 303 2.99e-50 171
Msa0797810 MtrunA17_Chr2g0314401 29.091 330 223 6 4 328 12 335 4.87e-50 170
Msa0797810 MtrunA17_Chr8g0375681 36.626 243 149 3 73 314 15 253 6.43e-50 168
Msa0797810 MtrunA17_Chr3g0102041 34.343 297 179 7 18 305 14 303 1.00e-49 169
Msa0797810 MtrunA17_Chr8g0365241 31.024 332 213 9 4 328 18 340 1.37e-49 169
Msa0797810 MtrunA17_Chr1g0184151 31.293 294 194 4 44 334 38 326 1.67e-49 168
Msa0797810 MtrunA17_Chr8g0375601 30.247 324 213 6 13 328 15 333 1.82e-49 169
Msa0797810 MtrunA17_Chr3g0087031 31.751 337 217 8 4 334 19 348 4.09e-49 168
Msa0797810 MtrunA17_Chr2g0332191 33.673 294 181 7 44 331 52 337 6.68e-49 167
Msa0797810 MtrunA17_Chr5g0421011 30.275 327 217 7 6 328 10 329 2.97e-48 166
Msa0797810 MtrunA17_Chr5g0423221 34.191 272 174 4 64 334 93 360 8.29e-48 165
Msa0797810 MtrunA17_Chr5g0405411 32.881 295 186 5 18 305 14 303 1.20e-47 164
Msa0797810 MtrunA17_Chr7g0265351 35.117 299 173 9 38 328 33 318 1.52e-47 163
Msa0797810 MtrunA17_Chr2g0314391 29.091 330 223 6 4 328 31 354 2.23e-47 164
Msa0797810 MtrunA17_Chr8g0375571 31.068 309 201 6 22 328 33 331 2.50e-47 163
Msa0797810 MtrunA17_Chr5g0420951 29.091 330 223 7 4 328 13 336 3.29e-47 163
Msa0797810 MtrunA17_Chr3g0125201 33.221 298 177 7 42 328 1 287 3.94e-47 161
Msa0797810 MtrunA17_Chr1g0162361 32.278 316 191 7 20 320 4 311 5.60e-47 162
Msa0797810 MtrunA17_Chr3g0093741 35.616 292 169 8 44 328 56 335 1.88e-46 161
Msa0797810 MtrunA17_Chr1g0184101 30.671 313 209 4 19 328 13 320 2.16e-46 160
Msa0797810 MtrunA17_Chr2g0314381 29.909 331 220 8 4 328 37 361 2.19e-46 161
Msa0797810 MtrunA17_Chr3g0093761 35.540 287 175 6 44 328 56 334 2.46e-46 160
Msa0797810 MtrunA17_Chr1g0162351 31.420 331 198 9 24 331 51 375 2.47e-46 161
Msa0797810 MtrunA17_Chr5g0421101 28.875 329 223 7 4 328 8 329 3.12e-46 160
Msa0797810 MtrunA17_Chr3g0093751 35.540 287 176 6 44 328 56 335 6.06e-46 159
Msa0797810 MtrunA17_Chr3g0126761 43.605 172 95 1 157 328 44 213 1.64e-45 155
Msa0797810 MtrunA17_Chr5g0420941 29.394 330 222 7 8 333 10 332 1.85e-45 158
Msa0797810 MtrunA17_Chr4g0045411 29.429 333 201 10 22 332 10 330 2.11e-45 158
Msa0797810 MtrunA17_Chr5g0423201 28.012 332 231 6 6 334 10 336 2.42e-45 158
Msa0797810 MtrunA17_Chr8g0336781 31.633 294 185 6 44 328 95 381 2.71e-45 159
Msa0797810 MtrunA17_Chr7g0220001 31.034 290 192 5 18 305 16 299 2.72e-45 157
Msa0797810 MtrunA17_Chr6g0455481 30.211 331 218 9 1 327 1 322 8.64e-45 156
Msa0797810 MtrunA17_Chr5g0421091 30.723 332 207 10 6 328 11 328 1.05e-44 156
Msa0797810 MtrunA17_Chr1g0162321 30.699 329 203 8 24 331 51 375 1.06e-44 157
Msa0797810 MtrunA17_Chr2g0311631 30.976 297 186 7 43 328 54 342 6.20e-44 154
Msa0797810 MtrunA17_Chr8g0336851 31.633 294 184 6 44 328 60 345 6.82e-44 154
Msa0797810 MtrunA17_Chr8g0336751 33.951 324 192 11 16 328 66 378 1.49e-43 154
Msa0797810 MtrunA17_Chr5g0420721 36.239 218 135 3 111 327 16 230 2.88e-43 150
Msa0797810 MtrunA17_Chr8g0354261 30.938 320 200 7 18 325 42 352 1.28e-42 151
Msa0797810 MtrunA17_Chr5g0420901 28.182 330 226 7 3 328 6 328 1.40e-42 150
Msa0797810 MtrunA17_Chr8g0336761 31.757 296 179 8 44 327 60 344 1.54e-42 150
Msa0797810 MtrunA17_Chr2g0311831 31.546 317 201 6 20 328 44 352 2.33e-42 150
Msa0797810 MtrunA17_Chr3g0121141 32.993 294 181 9 45 332 5 288 4.68e-42 148
Msa0797810 MtrunA17_Chr2g0311761 31.250 320 199 8 20 328 44 353 6.10e-42 149
Msa0797810 MtrunA17_Chr2g0289341 32.646 291 178 9 45 328 5 284 1.11e-41 147
Msa0797810 MtrunA17_Chr8g0348081 31.208 298 180 7 44 328 60 345 1.29e-41 148
Msa0797810 MtrunA17_Chr8g0354241 30.368 326 194 9 18 325 42 352 1.31e-41 149
Msa0797810 MtrunA17_Chr2g0311701 29.518 332 207 11 13 328 37 357 1.64e-41 148
Msa0797810 MtrunA17_Chr8g0336861 29.874 318 204 7 20 328 39 346 2.45e-41 147
Msa0797810 MtrunA17_Chr4g0045441 33.333 303 175 9 45 328 33 327 3.16e-41 147
Msa0797810 MtrunA17_Chr2g0311691 29.730 333 211 11 14 332 32 355 6.89e-41 146
Msa0797810 MtrunA17_Chr4g0045471 31.818 330 199 11 20 328 4 328 8.83e-41 146
Msa0797810 MtrunA17_Chr1g0148771 32.526 289 183 6 44 331 63 340 9.04e-41 146
Msa0797810 MtrunA17_Chr8g0336631 30.375 293 188 6 44 327 60 345 1.86e-40 145
Msa0797810 MtrunA17_Chr2g0311921 29.630 324 199 9 20 328 30 339 2.55e-40 145
Msa0797810 MtrunA17_Chr4g0045451 30.448 335 198 11 24 333 8 332 2.59e-40 144
Msa0797810 MtrunA17_Chr7g0225881 30.868 311 183 9 40 334 63 357 4.51e-40 144
Msa0797810 MtrunA17_Chr5g0423211 27.928 333 225 11 3 328 7 331 7.62e-40 143
Msa0797810 MtrunA17_Chr2g0311861 30.530 321 179 8 20 328 40 328 1.50e-39 142
Msa0797810 MtrunA17_Chr7g0239091 32.390 318 195 8 20 333 136 437 2.02e-39 144
Msa0797810 MtrunA17_Chr4g0045431 28.916 332 203 8 24 331 8 330 2.19e-39 142
Msa0797810 MtrunA17_Chr2g0311681 29.641 334 210 12 14 332 32 355 6.92e-39 141
Msa0797810 MtrunA17_Chr4g0066121 31.419 296 181 9 44 327 60 345 1.61e-38 140
Msa0797810 MtrunA17_Chr2g0311711 28.487 337 199 10 14 328 36 352 1.05e-37 138
Msa0797810 MtrunA17_Chr1g0191201 30.547 311 191 9 41 337 50 349 1.45e-37 138
Msa0797810 MtrunA17_Chr3g0114881 85.714 70 9 1 268 337 1 69 1.48e-37 129
Msa0797810 MtrunA17_Chr5g0439011 31.525 295 179 9 42 324 3 286 2.49e-37 136
Msa0797810 MtrunA17_Chr6g0474391 30.868 311 189 7 17 311 40 340 2.60e-37 137
Msa0797810 MtrunA17_Chr6g0472861 29.377 337 191 13 18 327 37 353 3.59e-37 137
Msa0797810 MtrunA17_Chr1g0184241 29.358 327 194 9 18 328 43 348 3.71e-37 136
Msa0797810 MtrunA17_Chr1g0187831 28.698 338 203 9 12 328 35 355 6.46e-37 136
Msa0797810 MtrunA17_Chr1g0204181 30.968 310 191 9 41 337 56 355 1.21e-36 135
Msa0797810 MtrunA17_Chr8g0351101 29.355 310 200 7 17 314 30 332 9.78e-36 133
Msa0797810 MtrunA17_Chr4g0064771 39.548 177 100 4 158 333 27 197 1.28e-35 128
Msa0797810 MtrunA17_Chr2g0285931 27.273 319 207 10 24 329 12 318 1.44e-35 132
Msa0797810 MtrunA17_Chr6g0488511 32.432 296 173 10 42 328 1 278 2.16e-35 130
Msa0797810 MtrunA17_Chr7g0266651 29.518 332 211 10 13 331 28 349 2.37e-35 132
Msa0797810 MtrunA17_Chr2g0319491 29.630 297 178 7 41 327 30 305 1.64e-34 129
Msa0797810 MtrunA17_Chr3g0125421 30.000 310 194 8 41 337 33 332 1.78e-34 129
Msa0797810 MtrunA17_Chr7g0235951 28.788 330 207 11 14 328 38 354 2.56e-34 129
Msa0797810 MtrunA17_Chr3g0130391 29.712 313 191 10 41 337 63 362 7.98e-34 128
Msa0797810 MtrunA17_Chr1g0187821 28.788 330 200 9 17 328 39 351 8.34e-34 127
Msa0797810 MtrunA17_Chr4g0055591 29.052 327 198 9 18 328 34 342 8.99e-34 127
Msa0797810 MtrunA17_Chr2g0314371 26.791 321 200 9 4 296 12 325 4.92e-33 125
Msa0797810 MtrunA17_Chr4g0045461 31.847 314 182 10 44 333 26 331 9.57e-33 125
Msa0797810 MtrunA17_Chr8g0358941 27.113 284 179 8 43 310 26 297 1.49e-32 124
Msa0797810 MtrunA17_Chr2g0313111 26.871 294 198 8 43 329 27 310 1.92e-32 123
Msa0797810 MtrunA17_Chr1g0187811 27.434 339 210 10 12 328 150 474 1.94e-32 126
Msa0797810 MtrunA17_Chr1g0167961 29.674 337 189 14 18 330 44 356 2.18e-32 124
Msa0797810 MtrunA17_Chr8g0364471 26.647 334 221 9 14 334 38 360 2.64e-32 124
Msa0797810 MtrunA17_Chr1g0167911 28.242 347 206 10 3 334 28 346 4.34e-32 123
Msa0797810 MtrunA17_Chr2g0311741 28.947 304 180 7 41 327 24 308 8.82e-32 121
Msa0797810 MtrunA17_Chr4g0009561 30.132 302 189 10 43 329 6 300 1.59e-31 120
Msa0797810 MtrunA17_Chr4g0052251 28.571 294 191 9 44 327 29 313 1.80e-31 120
Msa0797810 MtrunA17_Chr4g0068891 30.375 293 184 9 44 327 20 301 2.99e-31 120
Msa0797810 MtrunA17_Chr1g0170631 35.838 173 106 4 159 328 2 172 2.86e-30 114
Msa0797810 MtrunA17_Chr8g0335411 29.755 326 205 10 16 328 40 354 5.34e-30 117
Msa0797810 MtrunA17_Chr7g0247991 29.882 338 189 11 16 328 40 354 1.55e-29 116
Msa0797810 MtrunA17_Chr7g0236011 28.358 335 198 10 16 328 40 354 8.74e-29 114
Msa0797810 MtrunA17_Chr5g0420881 41.270 126 72 2 204 328 1 125 8.88e-29 108
Msa0797810 MtrunA17_Chr1g0194321 29.470 302 187 9 44 327 20 313 1.03e-28 113
Msa0797810 MtrunA17_Chr1g0161041 31.579 323 204 9 19 334 70 382 3.49e-28 113
Msa0797810 MtrunA17_Chr4g0066991 28.308 325 191 10 16 328 40 334 8.16e-28 111
Msa0797810 MtrunA17_Chr3g0105281 30.597 268 153 9 44 297 34 282 1.10e-27 110
Msa0797810 MtrunA17_Chr1g0161081 31.056 322 188 11 19 327 47 347 2.70e-27 110
Msa0797810 MtrunA17_Chr4g0075471 38.816 152 80 4 195 333 11 162 3.65e-27 104
Msa0797810 MtrunA17_Chr4g0053251 26.562 320 193 9 44 332 8 316 4.85e-27 108
Msa0797810 MtrunA17_Chr4g0011311 28.846 260 166 7 16 267 40 288 6.92e-27 107
Msa0797810 MtrunA17_Chr1g0167951 26.769 325 207 10 18 328 29 336 1.42e-26 107
Msa0797810 MtrunA17_Chr3g0092531 26.966 267 186 3 61 327 30 287 1.49e-26 107
Msa0797810 MtrunA17_Chr3g0138351 24.917 301 211 4 39 328 2 298 3.01e-26 106
Msa0797810 MtrunA17_Chr1g0161111 30.650 323 195 11 19 328 106 412 4.09e-26 107
Msa0797810 MtrunA17_Chr8g0389941 29.221 308 182 12 46 328 36 332 7.01e-26 105
Msa0797810 MtrunA17_Chr1g0158011 35.359 181 112 5 151 328 64 242 1.93e-25 102
Msa0797810 MtrunA17_Chr4g0055911 26.797 306 206 8 33 328 3 300 1.92e-24 101
Msa0797810 MtrunA17_Chr1g0167931 33.333 177 112 4 153 326 124 297 2.23e-24 101
Msa0797810 MtrunA17_Chr7g0235981 38.194 144 85 3 153 295 130 270 2.80e-24 101
Msa0797810 MtrunA17_Chr8g0362741 28.958 259 152 7 16 267 40 273 2.81e-24 100
Msa0797810 MtrunA17_Chr8g0336801 35.938 128 78 2 204 328 11 137 4.02e-24 96.7
Msa0797810 MtrunA17_Chr7g0247741 29.470 302 179 10 43 328 10 293 4.41e-24 100
Msa0797810 MtrunA17_Chr5g0394071 34.132 167 101 2 161 327 6 163 4.93e-24 97.1
Msa0797810 MtrunA17_Chr8g0336871 34.375 160 93 4 174 330 7 157 1.22e-23 95.9
Msa0797810 MtrunA17_Chr8g0348951 29.658 263 165 8 42 294 8 260 3.06e-23 98.2
Msa0797810 MtrunA17_Chr7g0233661 39.683 126 69 1 202 327 19 137 1.41e-22 92.4
Msa0797810 MtrunA17_Chr8g0384461 25.000 308 210 8 41 337 44 341 1.64e-22 96.7
Msa0797810 MtrunA17_Chr4g0009541 25.325 308 201 10 39 329 2 297 9.99e-22 94.0
Msa0797810 MtrunA17_Chr4g0055871 24.013 304 212 7 33 328 3 295 1.22e-21 93.6
Msa0797810 MtrunA17_Chr6g0486831 29.268 328 202 11 28 333 7 326 2.74e-21 93.2
Msa0797810 MtrunA17_Chr5g0407781 26.846 298 193 8 44 334 5 284 1.36e-20 90.5
Msa0797810 MtrunA17_Chr8g0384481 25.234 321 196 9 39 337 54 352 2.76e-20 90.5
Msa0797810 MtrunA17_Chr4g0004071 25.092 271 174 6 43 298 8 264 7.59e-20 88.6
Msa0797810 MtrunA17_Chr4g0004061 26.766 269 173 9 43 298 8 265 4.99e-19 86.3
Msa0797810 MtrunA17_Chr4g0037611 39.806 103 61 1 196 297 28 130 1.84e-18 82.0
Msa0797810 MtrunA17_Chr1g0158031 31.928 166 104 5 167 328 1 161 3.67e-18 81.3
Msa0797810 MtrunA17_Chr2g0319521 32.773 119 78 1 149 267 8 124 4.81e-18 79.7
Msa0797810 MtrunA17_Chr8g0364171 36.283 113 70 1 155 267 16 126 6.84e-18 79.3
Msa0797810 MtrunA17_Chr1g0158021 26.667 225 146 6 43 259 48 261 3.02e-17 80.5
Msa0797810 MtrunA17_Chr8g0375581 39.080 87 50 2 178 263 1 85 7.18e-16 72.0
Msa0797810 MtrunA17_Chr8g0336831 29.843 191 114 7 44 224 60 240 1.31e-15 75.5
Msa0797810 MtrunA17_Chr2g0293931 31.507 146 86 4 163 297 13 155 5.46e-15 72.8
Msa0797810 MtrunA17_Chr8g0375641 26.543 162 110 3 2 157 11 169 1.24e-14 71.2
Msa0797810 MtrunA17_Chr3g0092581 28.000 150 106 1 178 327 12 159 2.65e-14 70.5
Msa0797810 MtrunA17_Chr1g0148781 24.262 305 201 8 44 328 8 302 2.74e-14 72.8
Msa0797810 MtrunA17_Chr7g0256741 25.080 311 201 14 33 328 2 295 6.63e-13 68.6
Msa0797810 MtrunA17_Chr8g0375661 25.000 160 111 3 4 157 13 169 7.84e-13 65.9
Msa0797810 MtrunA17_Chr2g0311611 38.028 71 37 1 204 267 1 71 1.74e-11 59.3
Msa0797810 MtrunA17_Chr1g0184141 28.682 129 88 2 83 211 4 128 2.06e-11 60.8
Msa0797810 MtrunA17_Chr2g0293941 31.624 117 70 5 40 152 15 125 3.28e-11 61.2
Msa0797810 MtrunA17_Chr7g0219991 31.250 144 91 5 18 157 14 153 4.18e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0797810 AT5G08640.2 56.845 336 143 2 1 336 1 334 2.92e-143 408
Msa0797810 AT5G08640.1 56.845 336 143 2 1 336 1 334 2.92e-143 408
Msa0797810 AT5G63590.1 51.389 288 140 0 42 329 12 299 6.68e-112 328
Msa0797810 AT5G63600.1 42.587 317 170 4 16 332 10 314 5.76e-95 285
Msa0797810 AT5G63600.2 42.453 318 170 5 16 332 10 315 6.43e-94 283
Msa0797810 AT5G43935.1 42.953 298 140 5 43 335 18 290 8.34e-88 266
Msa0797810 AT4G22880.1 40.751 346 182 8 3 332 4 342 1.46e-81 252
Msa0797810 AT4G22880.2 40.751 346 182 8 3 332 4 342 1.46e-81 252
Msa0797810 AT4G22880.3 40.751 346 182 8 3 332 4 342 1.46e-81 252
Msa0797810 AT5G63595.1 42.966 263 128 2 45 307 26 266 2.22e-75 233
Msa0797810 AT2G38240.1 35.866 329 198 7 6 327 9 331 2.53e-67 215
Msa0797810 AT5G05600.1 35.088 342 209 5 3 337 24 359 2.62e-66 213
Msa0797810 AT3G11180.1 34.639 332 204 6 3 327 53 378 5.87e-66 213
Msa0797810 AT3G11180.2 34.639 332 204 6 3 327 53 378 6.02e-66 213
Msa0797810 AT5G63580.2 46.222 225 119 2 44 268 19 241 6.05e-66 208
Msa0797810 AT5G63580.1 46.847 222 116 2 44 265 19 238 8.83e-66 208
Msa0797810 AT3G21420.1 35.294 340 205 6 1 329 9 344 1.49e-63 206
Msa0797810 AT4G10500.1 33.227 313 198 5 20 327 20 326 4.56e-61 199
Msa0797810 AT4G10490.1 34.277 318 191 8 20 328 18 326 2.21e-60 197
Msa0797810 AT1G49390.1 33.437 323 202 7 16 329 15 333 1.49e-59 195
Msa0797810 AT4G16330.2 32.831 332 208 7 12 337 32 354 4.53e-58 192
Msa0797810 AT5G20400.1 34.862 327 195 7 16 331 15 334 5.48e-58 191
Msa0797810 AT1G17020.1 32.298 322 207 5 18 331 27 345 1.12e-56 188
Msa0797810 AT5G24530.1 34.286 315 195 7 18 327 13 320 2.37e-54 181
Msa0797810 AT5G54000.2 32.177 317 202 7 16 323 15 327 3.01e-54 181
Msa0797810 AT3G55970.1 34.024 338 203 9 3 327 11 341 4.15e-54 181
Msa0797810 AT1G49390.2 36.434 258 158 5 74 329 1 254 9.74e-54 177
Msa0797810 AT5G20550.1 34.237 295 182 7 42 328 43 333 2.16e-53 179
Msa0797810 AT1G17010.1 31.212 330 216 8 6 328 14 339 5.36e-53 178
Msa0797810 AT3G19010.1 35.897 312 171 10 43 334 27 329 9.79e-53 177
Msa0797810 AT3G19010.4 35.897 312 171 10 43 334 27 329 9.79e-53 177
Msa0797810 AT5G05600.2 34.559 272 166 4 3 267 24 290 1.79e-52 175
Msa0797810 AT3G13610.1 32.288 319 206 6 13 328 31 342 3.67e-52 176
Msa0797810 AT4G25300.1 31.667 300 197 4 18 312 26 322 7.27e-52 175
Msa0797810 AT2G36690.2 31.832 333 205 9 9 328 21 344 3.08e-51 174
Msa0797810 AT2G36690.1 31.832 333 205 9 9 328 21 344 3.08e-51 174
Msa0797810 AT1G78550.1 31.790 324 209 7 18 333 27 346 1.80e-50 172
Msa0797810 AT2G44800.1 32.087 321 194 8 20 328 27 335 1.90e-50 172
Msa0797810 AT3G60290.1 35.016 317 181 12 31 337 44 345 3.95e-50 171
Msa0797810 AT5G54000.1 34.661 251 159 4 74 323 1 247 1.66e-49 167
Msa0797810 AT4G25310.1 32.012 328 210 7 12 334 21 340 2.22e-49 169
Msa0797810 AT1G55290.1 33.218 289 181 6 44 328 62 342 4.16e-49 168
Msa0797810 AT3G51240.1 32.542 295 187 5 18 305 13 302 7.63e-49 167
Msa0797810 AT3G12900.1 33.438 317 195 9 18 328 31 337 6.52e-48 165
Msa0797810 AT4G16330.1 35.271 258 151 6 86 337 1 248 4.53e-47 160
Msa0797810 AT1G15550.1 32.877 292 185 6 44 331 57 341 6.08e-46 160
Msa0797810 AT1G06650.2 33.333 297 174 10 44 327 64 349 1.62e-45 159
Msa0797810 AT5G43440.1 33.758 314 182 9 35 335 53 353 1.88e-45 159
Msa0797810 AT1G06640.1 31.627 332 192 13 16 327 33 349 2.85e-45 158
Msa0797810 AT3G19010.3 33.654 312 148 10 43 334 27 299 2.19e-44 155
Msa0797810 AT1G78550.2 33.333 267 170 5 71 333 6 268 3.39e-44 153
Msa0797810 AT3G19000.1 31.935 310 182 7 43 331 31 332 1.35e-43 154
Msa0797810 AT5G43450.1 32.508 323 188 10 20 327 35 342 6.29e-43 152
Msa0797810 AT4G21690.1 30.183 328 199 10 17 331 26 336 2.70e-42 150
Msa0797810 AT3G55970.2 33.453 278 166 8 3 267 11 282 3.20e-42 149
Msa0797810 AT1G03410.1 34.021 291 172 10 41 320 91 372 1.21e-41 149
Msa0797810 AT1G77330.1 31.270 307 182 9 42 334 1 292 1.27e-41 147
Msa0797810 AT1G62380.1 31.399 293 182 8 42 328 5 284 1.38e-41 147
Msa0797810 AT1G03410.2 34.021 291 172 10 41 320 54 335 1.45e-41 149
Msa0797810 AT5G59540.1 32.107 299 179 8 42 327 59 346 2.25e-41 148
Msa0797810 AT1G06645.1 31.288 326 194 12 18 327 48 359 2.37e-41 148
Msa0797810 AT5G07480.1 31.894 301 179 9 44 328 44 334 1.09e-40 146
Msa0797810 AT1G12010.1 31.757 296 181 11 40 328 3 284 1.50e-40 145
Msa0797810 AT1G04350.1 32.450 302 181 10 37 327 51 340 1.51e-40 145
Msa0797810 AT5G51810.1 29.394 330 192 7 18 329 40 346 3.21e-40 145
Msa0797810 AT5G59530.1 31.683 303 176 10 42 327 56 344 5.86e-40 144
Msa0797810 AT4G25420.1 29.080 337 204 9 18 337 38 356 7.80e-40 144
Msa0797810 AT3G19010.2 34.959 246 133 8 43 268 27 265 9.41e-40 142
Msa0797810 AT1G80340.1 31.208 298 194 6 44 337 50 340 4.35e-39 142
Msa0797810 AT2G30830.1 31.270 307 186 10 42 333 52 348 6.75e-39 141
Msa0797810 AT2G30840.1 30.464 302 195 8 31 327 51 342 1.26e-38 140
Msa0797810 AT1G80330.1 30.000 310 194 9 34 331 39 337 2.91e-38 139
Msa0797810 AT1G04380.1 30.743 296 182 10 42 327 43 325 1.54e-37 137
Msa0797810 AT1G06620.1 31.498 327 186 11 20 327 38 345 2.90e-37 137
Msa0797810 AT3G19000.2 32.283 254 144 6 43 275 31 277 5.50e-37 134
Msa0797810 AT3G61400.1 31.475 305 184 11 36 327 59 351 6.15e-37 136
Msa0797810 AT3G51240.2 33.784 222 141 3 86 305 1 218 1.76e-36 133
Msa0797810 AT5G43440.2 35.537 242 134 6 35 266 53 282 1.92e-36 133
Msa0797810 AT5G07200.1 29.819 332 208 8 20 337 37 357 5.57e-36 134
Msa0797810 AT1G03400.1 31.849 292 180 9 42 327 54 332 1.03e-35 132
Msa0797810 AT5G12270.1 30.584 291 190 4 44 328 56 340 1.42e-35 132
Msa0797810 AT1G60980.1 31.095 283 169 6 42 305 55 330 1.61e-35 133
Msa0797810 AT1G06640.2 31.502 273 159 9 16 273 33 292 3.32e-35 130
Msa0797810 AT1G06640.3 31.835 267 154 9 16 267 33 286 6.40e-35 129
Msa0797810 AT2G30840.3 30.464 302 189 9 31 327 51 336 7.12e-35 130
Msa0797810 AT1G06650.1 34.052 232 136 7 44 267 64 286 7.37e-35 129
Msa0797810 AT1G02400.1 29.206 315 207 9 23 327 1 309 1.24e-34 129
Msa0797810 AT1G05010.1 33.577 274 163 10 45 310 5 267 1.50e-34 129
Msa0797810 AT1G78440.1 26.578 301 195 10 44 329 18 307 3.88e-34 128
Msa0797810 AT5G43450.2 32.432 259 149 7 20 266 35 279 1.63e-33 125
Msa0797810 AT1G44090.1 27.937 315 192 9 42 337 61 359 2.09e-33 127
Msa0797810 AT4G21200.1 32.491 277 168 7 29 297 25 290 1.49e-32 124
Msa0797810 AT4G25300.2 34.911 169 108 2 145 312 61 228 2.51e-31 119
Msa0797810 AT5G07480.2 32.420 219 138 6 116 328 11 225 2.58e-31 118
Msa0797810 AT1G50960.1 28.302 318 206 6 17 327 12 314 3.22e-31 120
Msa0797810 AT5G58660.1 28.247 308 190 8 17 298 4 306 4.80e-31 120
Msa0797810 AT1G03400.2 34.649 228 135 6 42 267 54 269 5.95e-31 120
Msa0797810 AT4G25310.2 28.049 328 195 8 12 334 21 312 8.20e-31 119
Msa0797810 AT5G59540.2 31.780 236 141 5 42 267 59 284 1.10e-30 118
Msa0797810 AT1G47990.1 26.214 309 201 8 33 327 4 299 1.22e-30 118
Msa0797810 AT2G19590.1 28.912 294 185 8 41 328 8 283 4.08e-30 117
Msa0797810 AT1G06620.2 33.080 263 142 9 20 266 38 282 7.04e-30 115
Msa0797810 AT1G30040.1 28.477 302 188 11 44 328 31 321 7.31e-30 117
Msa0797810 AT2G30840.2 30.252 238 155 4 31 266 51 279 3.97e-29 114
Msa0797810 AT1G04380.2 31.064 235 143 7 42 269 43 265 4.09e-29 113
Msa0797810 AT2G25450.1 29.758 289 181 9 44 320 55 333 2.74e-28 113
Msa0797810 AT2G34555.1 27.425 299 194 11 44 328 27 316 4.22e-28 112
Msa0797810 AT4G25420.2 28.464 267 162 7 18 267 38 292 5.55e-28 110
Msa0797810 AT5G51810.2 27.306 271 162 6 18 270 40 293 7.75e-27 107
Msa0797810 AT3G61400.2 31.535 241 145 8 36 267 59 288 1.09e-26 107
Msa0797810 AT4G23340.1 28.289 304 182 7 42 328 8 292 5.65e-26 106
Msa0797810 AT5G58660.2 27.174 276 171 7 17 267 4 274 1.73e-25 103
Msa0797810 AT3G47190.1 28.000 250 158 7 42 279 30 269 4.46e-25 103
Msa0797810 AT3G50210.4 26.102 295 178 8 44 305 8 295 4.12e-24 101
Msa0797810 AT3G50210.1 26.102 295 178 8 44 305 8 295 4.12e-24 101
Msa0797810 AT3G50210.3 26.102 295 178 8 44 305 8 295 4.12e-24 101
Msa0797810 AT1G02400.2 27.734 256 171 7 23 269 1 251 4.01e-23 97.1
Msa0797810 AT2G19590.2 28.571 266 159 8 71 328 26 268 4.41e-23 97.8
Msa0797810 AT1G14130.1 27.857 280 187 6 44 320 9 276 1.48e-22 96.3
Msa0797810 AT4G22870.1 45.918 98 51 2 236 332 2 98 3.77e-21 87.4
Msa0797810 AT3G49630.3 26.978 278 187 6 63 329 37 309 3.85e-21 92.8
Msa0797810 AT3G49630.1 26.978 278 187 6 63 329 41 313 3.90e-21 92.8
Msa0797810 AT3G49620.1 26.616 263 169 6 63 309 66 320 9.07e-20 89.4
Msa0797810 AT1G30040.2 27.350 234 149 9 44 267 31 253 1.85e-19 87.0
Msa0797810 AT4G22870.2 46.067 89 46 2 245 332 52 139 3.59e-19 83.6
Msa0797810 AT3G46500.5 25.753 299 202 9 44 328 17 309 4.32e-19 87.0
Msa0797810 AT1G14120.2 27.397 292 184 10 37 320 4 275 2.06e-18 84.7
Msa0797810 AT1G14120.1 27.397 292 184 10 37 320 4 275 2.06e-18 84.7
Msa0797810 AT1G14120.3 27.397 292 184 10 37 320 4 275 2.06e-18 84.7
Msa0797810 AT1G52820.1 25.175 286 189 7 42 314 10 283 1.14e-17 82.8
Msa0797810 AT3G50210.2 29.448 163 108 3 149 305 52 213 2.03e-17 80.9
Msa0797810 AT4G23340.2 32.402 179 104 5 161 328 2 174 3.49e-17 79.3
Msa0797810 AT3G49630.2 28.962 183 124 4 149 329 62 240 1.41e-16 79.0
Msa0797810 AT4G16770.1 26.484 219 139 5 39 243 17 227 4.06e-16 77.4
Msa0797810 AT3G46490.1 23.397 312 200 9 44 328 17 316 4.53e-15 75.5
Msa0797810 AT1G52800.1 24.815 270 169 8 43 294 9 262 2.07e-14 73.2
Msa0797810 AT3G46500.7 24.627 268 183 8 44 297 17 279 2.93e-14 72.8
Msa0797810 AT1G28030.1 26.814 317 196 11 40 337 9 308 3.14e-14 72.8
Msa0797810 AT4G03070.1 22.112 303 215 8 39 329 9 302 2.07e-12 67.4
Msa0797810 AT3G46480.1 33.051 118 72 3 216 328 154 269 1.72e-11 64.3
Msa0797810 AT1G52820.2 24.268 239 156 7 42 267 10 236 3.03e-11 63.5

Find 89 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGTTCCTGATCTTGTTCT+AGG 0.155967 5_3:+10107500 Msa0797810:CDS
CCTTGGACTGTTGTTGTTCC+TGG 0.208400 5_3:-10104561 None:intergenic
ATCATTTGTTTCATATTATA+TGG 0.244488 5_3:+10104862 Msa0797810:CDS
AAGTAACAATGGAGGTTCTA+AGG 0.267350 5_3:+10104460 Msa0797810:exon
GTGATTCAGTTTCTGATCTA+AGG 0.272680 5_3:-10104539 None:intergenic
CCAACTTCTTGTTCTGGCTT+TGG 0.292897 5_3:-10108764 None:intergenic
TAATGGAAGCAAGTACAAAA+TGG 0.302252 5_3:+10104649 Msa0797810:CDS
AAAAGTTTGTCAACTGGTCT+TGG 0.310609 5_3:+10107395 Msa0797810:CDS
CTACAAACCCCGCTTCTTAC+AGG 0.316915 5_3:+10104916 Msa0797810:CDS
ATGTGAATGACAAGGGCATT+AGG 0.322438 5_3:-10107629 None:intergenic
CACTTCATTGGGGACCAAAA+TGG 0.327391 5_3:-10107555 None:intergenic
ACCTGTTGGGTCTGATTCAT+TGG 0.330054 5_3:+10104785 Msa0797810:CDS
TGAGGACCAACTTCTTGTTC+TGG 0.331450 5_3:-10108770 None:intergenic
ACTGAGCAATGGAAAATATA+AGG 0.341279 5_3:+10108676 Msa0797810:CDS
TAACTTCATTTGGAATTTCA+TGG 0.342482 5_3:-10104692 None:intergenic
TTGTCTTGGTTAACAAACTT+TGG 0.344536 5_3:-10108794 None:intergenic
TGAAGACCCTGCACTTCATT+GGG 0.346500 5_3:-10107566 None:intergenic
TTGAAGACCCTGCACTTCAT+TGG 0.353572 5_3:-10107567 None:intergenic
TGTCTTGGTTAACAAACTTT+GGG 0.383372 5_3:-10108793 None:intergenic
GGGTTGCTGAAATCTATTAT+AGG 0.383741 5_3:-10104600 None:intergenic
GTACAAAACAAAGAAATATA+AGG 0.384846 5_3:+10108829 Msa0797810:CDS
AAAGTTTGTCAACTGGTCTT+GGG 0.397315 5_3:+10107396 Msa0797810:CDS
TGTGAATGACAAGGGCATTA+GGG 0.398910 5_3:-10107628 None:intergenic
ATAAAATATGTAGCTAAAGT+TGG 0.400019 5_3:+10108995 Msa0797810:three_prime_UTR
CTGTAAGAAGCGGGGTTTGT+AGG 0.401849 5_3:-10104915 None:intergenic
TAGAACCTCCATTGTTACTT+TGG 0.407103 5_3:-10104457 None:intergenic
AATGGAAGCAAGTACAAAAT+GGG 0.407140 5_3:+10104650 Msa0797810:CDS
AGGGAAGTGAATGAGGAATA+TGG 0.424371 5_3:+10107338 Msa0797810:intron
CATTCACATTGGTGACCAAA+TGG 0.441391 5_3:+10107643 Msa0797810:CDS
CTATTCAAAAGTTTGTCAAC+TGG 0.450928 5_3:+10107389 Msa0797810:CDS
TATATATACATACCTCCATT+TGG 0.456033 5_3:-10107658 None:intergenic
GCTTGAAGAACATGAACTTA+AGG 0.461104 5_3:+10107418 Msa0797810:CDS
GAGGTTATTGCTAAACCTGT+TGG 0.467337 5_3:+10104771 Msa0797810:CDS
AGGTGAATGGGAAGAAAGGT+TGG 0.469295 5_3:+10104835 Msa0797810:CDS
TTTGGTCCCCAATGAAGTGC+AGG 0.480854 5_3:+10107559 Msa0797810:CDS
AGGTTATTGCTAAACCTGTT+GGG 0.485082 5_3:+10104772 Msa0797810:CDS
TCCAATGAATCAGACCCAAC+AGG 0.488108 5_3:-10104786 None:intergenic
TAAACATACCTGTAAGAAGC+GGG 0.498836 5_3:-10104924 None:intergenic
AGCATTTCTTCCTTCACTGA+GGG 0.503814 5_3:-10108880 None:intergenic
TCCACAGAGAAGTAATTTAG+TGG 0.512877 5_3:+10108902 Msa0797810:three_prime_UTR
CTGATCTAAGGAACATGGAT+GGG 0.518081 5_3:-10104527 None:intergenic
GTTGGGTCTGATTCATTGGA+AGG 0.520529 5_3:+10104789 Msa0797810:CDS
AAAGAGGTGAATGGGAAGAA+AGG 0.520644 5_3:+10104831 Msa0797810:CDS
AAACGGTAATTAATGGAAGA+AGG 0.523112 5_3:-10104888 None:intergenic
GGCACACCTAGAACAAGATC+AGG 0.525900 5_3:-10107506 None:intergenic
AGTAACAATGGAGGTTCTAA+GGG 0.528023 5_3:+10104461 Msa0797810:exon
CCAAAGCCAGAACAAGAAGT+TGG 0.531642 5_3:+10108764 Msa0797810:CDS
TCTGATTCATTGGAAGGGTA+TGG 0.532275 5_3:+10104795 Msa0797810:CDS
GGCTTTGGCTCTATGAACAC+TGG 0.534226 5_3:-10108749 None:intergenic
CCTAGAACAAGATCAGGAAC+TGG 0.541583 5_3:-10107500 None:intergenic
ACTTTGGAGGAATATTGTCT+TGG 0.543958 5_3:-10108808 None:intergenic
TGGTTAACAAACTTTGGGTG+AGG 0.545680 5_3:-10108788 None:intergenic
GGTGAATGGGAAGAAAGGTT+GGG 0.547721 5_3:+10104836 Msa0797810:CDS
TTTCATGTCACACTATGTGT+TGG 0.549769 5_3:+10108928 Msa0797810:three_prime_UTR
TTGGGTCTGATTCATTGGAA+GGG 0.562176 5_3:+10104790 Msa0797810:CDS
AAGCCTCTAGAGGTGGTCAA+TGG 0.567636 5_3:+10107588 Msa0797810:CDS
CAGGGTCTTCAAGCCTCTAG+AGG 0.569935 5_3:+10107578 Msa0797810:CDS
TCTGATCTAAGGAACATGGA+TGG 0.570716 5_3:-10104528 None:intergenic
GTACCTCAAGTTTCACACCT+TGG 0.572498 5_3:-10104578 None:intergenic
AGTTTCTGATCTAAGGAACA+TGG 0.572928 5_3:-10104532 None:intergenic
CATGAACTTAAGGAAGCTGC+AGG 0.573114 5_3:+10107428 Msa0797810:CDS
ATAAACATACCTGTAAGAAG+CGG 0.590011 5_3:-10104925 None:intergenic
TTAATAAGATCCCTCAGTGA+AGG 0.600298 5_3:+10108870 Msa0797810:CDS
TGGCAAGTACCTACGTGAAG+TGG 0.602357 5_3:+10107358 Msa0797810:CDS
GAGCATTTCTTCCTTCACTG+AGG 0.607034 5_3:-10108881 None:intergenic
CCAGGAACAACAACAGTCCA+AGG 0.609380 5_3:+10104561 Msa0797810:CDS
TTGGTCCCCAATGAAGTGCA+GGG 0.611056 5_3:+10107560 Msa0797810:CDS
GAAGACCCTGCACTTCATTG+GGG 0.614684 5_3:-10107565 None:intergenic
AATGCCCTTGTCATTCACAT+TGG 0.619150 5_3:+10107632 Msa0797810:CDS
AGATCAGAAACTGAATCACC+AGG 0.620580 5_3:+10104543 Msa0797810:CDS
ACAAGATCAGGAACTGGACA+TGG 0.629971 5_3:-10107494 None:intergenic
TCCACTAAATTACTTCTCTG+TGG 0.633066 5_3:-10108903 None:intergenic
ATACCATTGACCACCTCTAG+AGG 0.637074 5_3:-10107591 None:intergenic
AGATCAGGAACTGGACATGG+TGG 0.638247 5_3:-10107491 None:intergenic
GAACTTAAGGAAGCTGCAGG+TGG 0.638880 5_3:+10107431 Msa0797810:CDS
GTCACCAATGTGAATGACAA+GGG 0.645586 5_3:-10107636 None:intergenic
AGAAAAGACATATCTGTGTG+TGG 0.647390 5_3:-10107530 None:intergenic
ATGGAAGCAAGTACAAAATG+GGG 0.648572 5_3:+10104651 Msa0797810:CDS
GGTCACCAATGTGAATGACA+AGG 0.648978 5_3:-10107637 None:intergenic
GGTCTTCAAGCCTCTAGAGG+TGG 0.651717 5_3:+10107581 Msa0797810:CDS
GATCAGGAACTGGACATGGT+GGG 0.653909 5_3:-10107490 None:intergenic
TATCAAATGATCGTGTCATG+TGG 0.657773 5_3:+10108958 Msa0797810:three_prime_UTR
AGTCCAAGGTGTGAAACTTG+AGG 0.663823 5_3:+10104575 Msa0797810:CDS
AAACATACCTGTAAGAAGCG+GGG 0.665576 5_3:-10104923 None:intergenic
TCACATTGGTGACCAAATGG+AGG 0.676061 5_3:+10107646 Msa0797810:CDS
CGGTAATTAATGGAAGAAGG+TGG 0.685706 5_3:-10104885 None:intergenic
AAAGACATATCTGTGTGTGG+AGG 0.700387 5_3:-10107527 None:intergenic
AAGATGAGACAAGAATGTCG+TGG 0.735854 5_3:+10108726 Msa0797810:CDS
GTTTGTCTGCCACTTCACGT+AGG 0.737897 5_3:-10107367 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATACAAAATGAAATAA+TGG + chr5_3:10104632-10104651 Msa0797810:CDS 10.0%
!! TCAATAAACATTTAATATTT+CGG - chr5_3:10106422-10106441 None:intergenic 10.0%
!!! TTGTTTTTTAATTTTGTTAT+TGG + chr5_3:10107002-10107021 Msa0797810:intron 10.0%
!! AGCAATTATTATATATATAT+TGG + chr5_3:10108193-10108212 Msa0797810:intron 10.0%
!!! TTTGTATTTTTTCTTTATCA+GGG - chr5_3:10104623-10104642 None:intergenic 15.0%
!!! TTTTGTATTTTTTCTTTATC+AGG - chr5_3:10104624-10104643 None:intergenic 15.0%
!!! AACTTTTTTATAACTTCATT+TGG - chr5_3:10104705-10104724 None:intergenic 15.0%
!! ATCATTTGTTTCATATTATA+TGG + chr5_3:10104862-10104881 Msa0797810:CDS 15.0%
!! AATTATAAGTAGAGTAATTA+AGG - chr5_3:10105012-10105031 None:intergenic 15.0%
!!! ACGATGAATATATTTTTATA+TGG - chr5_3:10105253-10105272 None:intergenic 15.0%
!! ATTTAAATTTAATGAGAGAT+TGG + chr5_3:10105740-10105759 Msa0797810:intron 15.0%
!! TATTCTTATCGTATAAATAA+AGG - chr5_3:10105777-10105796 None:intergenic 15.0%
!!! TATTTATTTTTCTTTCTGAA+AGG + chr5_3:10105899-10105918 Msa0797810:intron 15.0%
!!! AATTATCTTCTTTTTAGAAA+AGG + chr5_3:10106212-10106231 Msa0797810:intron 15.0%
!!! TTATGGTTTTTTTTTTTTTG+AGG + chr5_3:10106273-10106292 Msa0797810:intron 15.0%
!!! TATGGTTTTTTTTTTTTTGA+GGG + chr5_3:10106274-10106293 Msa0797810:intron 15.0%
!! TTATCTAAACTTAATCTTTA+AGG + chr5_3:10106453-10106472 Msa0797810:intron 15.0%
!! TTTATCTTCAATACTAAATA+TGG - chr5_3:10106480-10106499 None:intergenic 15.0%
!!! TTTTCTTTTTCTAAACAAAA+AGG - chr5_3:10106521-10106540 None:intergenic 15.0%
!!! TGCTTATATTTTTTTTTGAA+GGG - chr5_3:10107781-10107800 None:intergenic 15.0%
!!! ATGCTTATATTTTTTTTTGA+AGG - chr5_3:10107782-10107801 None:intergenic 15.0%
!! ATATTGTTGTATAATTAACT+TGG + chr5_3:10107845-10107864 Msa0797810:intron 15.0%
!!! TTTTCACTAGTTTTTTTTAT+AGG + chr5_3:10109048-10109067 Msa0797810:three_prime_UTR 15.0%
!!! GTTTTTTTTTCTTTCTTTTG+TGG - chr5_3:10104438-10104457 None:intergenic 20.0%
!! AAAAAAAACCAAAGTAACAA+TGG + chr5_3:10104449-10104468 Msa0797810:exon 20.0%
!! ATAAAAAAGTTACAAAGTGT+TGG + chr5_3:10104714-10104733 Msa0797810:CDS 20.0%
!! TACTCTAACAATAAAATACA+AGG - chr5_3:10105036-10105055 None:intergenic 20.0%
!!! AGGTTATTATTATTTTGAGT+TGG + chr5_3:10105139-10105158 Msa0797810:intron 20.0%
!! GTTTAAATTATCATAGTCAT+AGG - chr5_3:10105561-10105580 None:intergenic 20.0%
!! AAACATGTAAACATAAAGTT+AGG + chr5_3:10105577-10105596 Msa0797810:intron 20.0%
!! AACATTTAATATTTCGGTTA+GGG - chr5_3:10106416-10106435 None:intergenic 20.0%
!! AAACATTTAATATTTCGGTT+AGG - chr5_3:10106417-10106436 None:intergenic 20.0%
!! ATAAAAAGAAACAAACTTAG+AGG + chr5_3:10106909-10106928 Msa0797810:intron 20.0%
!!! GACTCATTTTTATTGTTATT+AGG - chr5_3:10108360-10108379 None:intergenic 20.0%
!!! ATTAGTTTCTCATAATCAAT+TGG - chr5_3:10108612-10108631 None:intergenic 20.0%
!!! TATTTCTTTGTTTTGTACTT+TGG - chr5_3:10108827-10108846 None:intergenic 20.0%
!! GTACAAAACAAAGAAATATA+AGG + chr5_3:10108829-10108848 Msa0797810:CDS 20.0%
!! ATAAAATATGTAGCTAAAGT+TGG + chr5_3:10108995-10109014 Msa0797810:three_prime_UTR 20.0%
!! TAACTTCATTTGGAATTTCA+TGG - chr5_3:10104695-10104714 None:intergenic 25.0%
!! TACATTCTTTTTGTTAGAGT+AGG + chr5_3:10105119-10105138 Msa0797810:intron 25.0%
! ATTGTTAGTAGTTCTTTAGA+GGG - chr5_3:10105220-10105239 None:intergenic 25.0%
! AATTGTTAGTAGTTCTTTAG+AGG - chr5_3:10105221-10105240 None:intergenic 25.0%
!! TTCTGAAAGGTTTATATTAG+TGG + chr5_3:10105912-10105931 Msa0797810:intron 25.0%
! ATTTAATTAACCCTTCCAAA+AGG + chr5_3:10105965-10105984 Msa0797810:intron 25.0%
! TTTAATTAACCCTTCCAAAA+GGG + chr5_3:10105966-10105985 Msa0797810:intron 25.0%
!! AAGATTTTCTTGGTTACAAT+TGG - chr5_3:10106045-10106064 None:intergenic 25.0%
! GAAAATTCAAACTCATAAAG+AGG - chr5_3:10106091-10106110 None:intergenic 25.0%
!!! TTTCCTTACATGTGTTTTTA+TGG + chr5_3:10106256-10106275 Msa0797810:intron 25.0%
! AAACCATAAAAACACATGTA+AGG - chr5_3:10106262-10106281 None:intergenic 25.0%
! CGTTGTTTGTTTATGTAAAT+GGG - chr5_3:10106322-10106341 None:intergenic 25.0%
! ACGTTGTTTGTTTATGTAAA+TGG - chr5_3:10106323-10106342 None:intergenic 25.0%
!!! TTATTGACTTATTTCTATGG+AGG - chr5_3:10106356-10106375 None:intergenic 25.0%
!!! GAGTTATTGACTTATTTCTA+TGG - chr5_3:10106359-10106378 None:intergenic 25.0%
! AGAAATAAGTCAATAACTCT+AGG + chr5_3:10106360-10106379 Msa0797810:intron 25.0%
! ACATTTAATATTTCGGTTAG+GGG - chr5_3:10106415-10106434 None:intergenic 25.0%
!! TTTTTCTAAACAAAAAGGAG+AGG - chr5_3:10106516-10106535 None:intergenic 25.0%
! ATCACAATAAAAGACTATGT+TGG + chr5_3:10106828-10106847 Msa0797810:intron 25.0%
! GTGTTTATTTGAATATGTGT+AGG - chr5_3:10107036-10107055 None:intergenic 25.0%
! CATATTCAAATAAACACACA+TGG + chr5_3:10107039-10107058 Msa0797810:intron 25.0%
! AATTATAGATCACTCATGTA+AGG - chr5_3:10107244-10107263 None:intergenic 25.0%
!!! ACTTGTTTACTTTTTTTGCA+GGG + chr5_3:10107319-10107338 Msa0797810:intron 25.0%
!! TATGTCTTTTCTTACCATTT+TGG + chr5_3:10107541-10107560 Msa0797810:CDS 25.0%
! TATATATACATACCTCCATT+TGG - chr5_3:10107661-10107680 None:intergenic 25.0%
!!! ATATCGGTTTATTATTTTGC+AGG - chr5_3:10107923-10107942 None:intergenic 25.0%
! AAAAAGGACATGTTAAACAT+CGG - chr5_3:10108010-10108029 None:intergenic 25.0%
! TTTGTTGAAAAACAAAGGAA+GGG + chr5_3:10108227-10108246 Msa0797810:intron 25.0%
!! ATTTTATAGATACTGAGCAA+TGG + chr5_3:10108665-10108684 Msa0797810:intron 25.0%
AAAAACCAAAGTAACAATGG+AGG + chr5_3:10104452-10104471 Msa0797810:exon 30.0%
TAATGGAAGCAAGTACAAAA+TGG + chr5_3:10104649-10104668 Msa0797810:CDS 30.0%
AATGGAAGCAAGTACAAAAT+GGG + chr5_3:10104650-10104669 Msa0797810:CDS 30.0%
!! ATAACCTCTTTTTCATCTTG+TGG - chr5_3:10104759-10104778 None:intergenic 30.0%
TGGTACAAAACTTCAAAAAG+AGG + chr5_3:10104815-10104834 Msa0797810:CDS 30.0%
AAACTTCAAAAAGAGGTGAA+TGG + chr5_3:10104822-10104841 Msa0797810:CDS 30.0%
AACTTCAAAAAGAGGTGAAT+GGG + chr5_3:10104823-10104842 Msa0797810:CDS 30.0%
AAACGGTAATTAATGGAAGA+AGG - chr5_3:10104891-10104910 None:intergenic 30.0%
! CTTCCATTAATTACCGTTTT+TGG + chr5_3:10104892-10104911 Msa0797810:CDS 30.0%
ATAAACATACCTGTAAGAAG+CGG - chr5_3:10104928-10104947 None:intergenic 30.0%
!!! ACATACAAAGAGTACCTTTT+AGG + chr5_3:10105162-10105181 Msa0797810:intron 30.0%
AAAGTTGTATGTAGAGTAGA+AGG + chr5_3:10105810-10105829 Msa0797810:intron 30.0%
GTATATGCAACATGTGAATT+AGG + chr5_3:10105861-10105880 Msa0797810:intron 30.0%
TTACAATTGGAGGTAAGATA+GGG - chr5_3:10106032-10106051 None:intergenic 30.0%
! ATTTTCTTGGTTACAATTGG+AGG - chr5_3:10106042-10106061 None:intergenic 30.0%
AAAAACACATGTAAGGAAAG+TGG - chr5_3:10106255-10106274 None:intergenic 30.0%
TGTTTGTTTATGTAAATGGG+TGG - chr5_3:10106319-10106338 None:intergenic 30.0%
ATAAACAAACAACGTGTACT+TGG + chr5_3:10106328-10106347 Msa0797810:intron 30.0%
! CTTGTTCTTGTTAAGCATTT+TGG + chr5_3:10106597-10106616 Msa0797810:intron 30.0%
TAATACGACAAGTGTGATAT+AGG - chr5_3:10106663-10106682 None:intergenic 30.0%
GGACTATTTCAAAAACTCAA+AGG + chr5_3:10106930-10106949 Msa0797810:intron 30.0%
!!! AAAATTTTGAGTTCGAACTC+TGG - chr5_3:10107084-10107103 None:intergenic 30.0%
!! CCTATTGGTTTCTATTGATT+TGG - chr5_3:10107126-10107145 None:intergenic 30.0%
CCAAATCAATAGAAACCAAT+AGG + chr5_3:10107123-10107142 Msa0797810:intron 30.0%
!!! CACTTGTTTACTTTTTTTGC+AGG + chr5_3:10107318-10107337 Msa0797810:intron 30.0%
CTATTCAAAAGTTTGTCAAC+TGG + chr5_3:10107389-10107408 Msa0797810:CDS 30.0%
TGAAATTGTGCCTAAAAATG+TGG + chr5_3:10107710-10107729 Msa0797810:intron 30.0%
! TTGTATAATTAACTTGGCCA+CGG + chr5_3:10107851-10107870 Msa0797810:intron 30.0%
GAGGATTTGTGTTTATTAAG+CGG - chr5_3:10107988-10108007 None:intergenic 30.0%
! GATGTTTAACATGTCCTTTT+TGG + chr5_3:10108009-10108028 Msa0797810:intron 30.0%
TGGTATGATTCATACCAAAA+AGG - chr5_3:10108026-10108045 None:intergenic 30.0%
! GTGTATTTGTTGGAGAAAAA+AGG + chr5_3:10108104-10108123 Msa0797810:intron 30.0%
! AGTGCTTTGTTGAAAAACAA+AGG + chr5_3:10108222-10108241 Msa0797810:intron 30.0%
CTTTGTTGAAAAACAAAGGA+AGG + chr5_3:10108226-10108245 Msa0797810:intron 30.0%
ATGAGTCAAAGAGAAATTGA+AGG + chr5_3:10108373-10108392 Msa0797810:intron 30.0%
TGAGTCAAAGAGAAATTGAA+GGG + chr5_3:10108374-10108393 Msa0797810:intron 30.0%
AGAGAAATTGAAGGGATATT+TGG + chr5_3:10108382-10108401 Msa0797810:intron 30.0%
ACTGAGCAATGGAAAATATA+AGG + chr5_3:10108676-10108695 Msa0797810:CDS 30.0%
TGTCTTGGTTAACAAACTTT+GGG - chr5_3:10108796-10108815 None:intergenic 30.0%
TTGTCTTGGTTAACAAACTT+TGG - chr5_3:10108797-10108816 None:intergenic 30.0%
!!! TTCTTTGTTTTGTACTTTGG+AGG - chr5_3:10108824-10108843 None:intergenic 30.0%
! TAGAACCTCCATTGTTACTT+TGG - chr5_3:10104460-10104479 None:intergenic 35.0%
AAGTAACAATGGAGGTTCTA+AGG + chr5_3:10104460-10104479 Msa0797810:exon 35.0%
! AGTAACAATGGAGGTTCTAA+GGG + chr5_3:10104461-10104480 Msa0797810:exon 35.0%
AGTTTCTGATCTAAGGAACA+TGG - chr5_3:10104535-10104554 None:intergenic 35.0%
GTGATTCAGTTTCTGATCTA+AGG - chr5_3:10104542-10104561 None:intergenic 35.0%
GGGTTGCTGAAATCTATTAT+AGG - chr5_3:10104603-10104622 None:intergenic 35.0%
ATGGAAGCAAGTACAAAATG+GGG + chr5_3:10104651-10104670 Msa0797810:CDS 35.0%
GTTACCACAAGATGAAAAAG+AGG + chr5_3:10104752-10104771 Msa0797810:CDS 35.0%
AGGTTATTGCTAAACCTGTT+GGG + chr5_3:10104772-10104791 Msa0797810:CDS 35.0%
AGGCCAAAAACGGTAATTAA+TGG - chr5_3:10104898-10104917 None:intergenic 35.0%
TAAACATACCTGTAAGAAGC+GGG - chr5_3:10104927-10104946 None:intergenic 35.0%
!!! AGTAGTCCATTATTTTGAGC+TGG + chr5_3:10105052-10105071 Msa0797810:intron 35.0%
!!! GTAGTCCATTATTTTGAGCT+GGG + chr5_3:10105053-10105072 Msa0797810:intron 35.0%
TATGTCCCAGCTCAAAATAA+TGG - chr5_3:10105061-10105080 None:intergenic 35.0%
!!! TACAAAGAGTACCTTTTAGG+AGG + chr5_3:10105165-10105184 Msa0797810:intron 35.0%
! AGAGAATCTTTTTCTGACGA+TGG + chr5_3:10105611-10105630 Msa0797810:intron 35.0%
!! TTTGTTCTGAAGTGCAAAGA+AGG + chr5_3:10105993-10106012 Msa0797810:intron 35.0%
GTTACAATTGGAGGTAAGAT+AGG - chr5_3:10106033-10106052 None:intergenic 35.0%
! AGTTGGAGGTAAGATTTTCT+TGG - chr5_3:10106055-10106074 None:intergenic 35.0%
GAACACTAACATTTAGTTGG+AGG - chr5_3:10106069-10106088 None:intergenic 35.0%
GAGGAACACTAACATTTAGT+TGG - chr5_3:10106072-10106091 None:intergenic 35.0%
GGGGATTTACTCAATATAGT+GGG - chr5_3:10106396-10106415 None:intergenic 35.0%
AGGGGATTTACTCAATATAG+TGG - chr5_3:10106397-10106416 None:intergenic 35.0%
TCTAAACAAAAAGGAGAGGT+AGG - chr5_3:10106512-10106531 None:intergenic 35.0%
CTTCATCAAACAAAGGTAGA+TGG - chr5_3:10106627-10106646 None:intergenic 35.0%
ACAAGTGTGATATAGGTAGA+TGG - chr5_3:10106656-10106675 None:intergenic 35.0%
CTGAATGACTCTTATGAGTT+GGG - chr5_3:10106857-10106876 None:intergenic 35.0%
! AAAAGTTTGTCAACTGGTCT+TGG + chr5_3:10107395-10107414 Msa0797810:CDS 35.0%
!! AAAGTTTGTCAACTGGTCTT+GGG + chr5_3:10107396-10107415 Msa0797810:CDS 35.0%
GCTTGAAGAACATGAACTTA+AGG + chr5_3:10107418-10107437 Msa0797810:CDS 35.0%
AGAAAAGACATATCTGTGTG+TGG - chr5_3:10107533-10107552 None:intergenic 35.0%
ATTGTGCCTAAAAATGTGGT+TGG + chr5_3:10107714-10107733 Msa0797810:intron 35.0%
! ACTATGCCAACCACATTTTT+AGG - chr5_3:10107723-10107742 None:intergenic 35.0%
TCACGCATGAGATTACATAT+CGG - chr5_3:10107939-10107958 None:intergenic 35.0%
ACCACATGAAACATAAACCT+AGG + chr5_3:10108075-10108094 Msa0797810:intron 35.0%
TCCTAGGTTTATGTTTCATG+TGG - chr5_3:10108079-10108098 None:intergenic 35.0%
AACAAATACACTGAGTTCCT+AGG - chr5_3:10108095-10108114 None:intergenic 35.0%
TAGGAACTCAGTGTATTTGT+TGG + chr5_3:10108094-10108113 Msa0797810:intron 35.0%
! TATTTTACACACGTGCCTTA+AGG - chr5_3:10108273-10108292 None:intergenic 35.0%
TAATTGAGGCCTCCATAAAT+TGG - chr5_3:10108460-10108479 None:intergenic 35.0%
CATACCCCTACAAATAATTG+AGG - chr5_3:10108474-10108493 None:intergenic 35.0%
! AGGGGTATGAGTATAATTGT+TGG + chr5_3:10108485-10108504 Msa0797810:intron 35.0%
GGGGTATGAGTATAATTGTT+GGG + chr5_3:10108486-10108505 Msa0797810:intron 35.0%
GAGTATAATTGTTGGGATGT+AGG + chr5_3:10108493-10108512 Msa0797810:intron 35.0%
! ACTTTGGAGGAATATTGTCT+TGG - chr5_3:10108811-10108830 None:intergenic 35.0%
TTAATAAGATCCCTCAGTGA+AGG + chr5_3:10108870-10108889 Msa0797810:CDS 35.0%
TCCACAGAGAAGTAATTTAG+TGG + chr5_3:10108902-10108921 Msa0797810:three_prime_UTR 35.0%
TCCACTAAATTACTTCTCTG+TGG - chr5_3:10108906-10108925 None:intergenic 35.0%
TTTCATGTCACACTATGTGT+TGG + chr5_3:10108928-10108947 Msa0797810:three_prime_UTR 35.0%
TATCAAATGATCGTGTCATG+TGG + chr5_3:10108958-10108977 Msa0797810:three_prime_UTR 35.0%
CTGATCTAAGGAACATGGAT+GGG - chr5_3:10104530-10104549 None:intergenic 40.0%
TCTGATCTAAGGAACATGGA+TGG - chr5_3:10104531-10104550 None:intergenic 40.0%
AGATCAGAAACTGAATCACC+AGG + chr5_3:10104543-10104562 Msa0797810:CDS 40.0%
GAGGTTATTGCTAAACCTGT+TGG + chr5_3:10104771-10104790 Msa0797810:CDS 40.0%
TTGGGTCTGATTCATTGGAA+GGG + chr5_3:10104790-10104809 Msa0797810:CDS 40.0%
TCTGATTCATTGGAAGGGTA+TGG + chr5_3:10104795-10104814 Msa0797810:CDS 40.0%
AAAGAGGTGAATGGGAAGAA+AGG + chr5_3:10104831-10104850 Msa0797810:CDS 40.0%
CGGTAATTAATGGAAGAAGG+TGG - chr5_3:10104888-10104907 None:intergenic 40.0%
AAACATACCTGTAAGAAGCG+GGG - chr5_3:10104926-10104945 None:intergenic 40.0%
CCAGTTATTGACCTCCTAAA+AGG - chr5_3:10105179-10105198 None:intergenic 40.0%
!! CCTTTTAGGAGGTCAATAAC+TGG + chr5_3:10105176-10105195 Msa0797810:intron 40.0%
! CTCTGGGGATAAATATAGGT+GGG - chr5_3:10105499-10105518 None:intergenic 40.0%
TATATTTATCCCCAGAGGCT+GGG + chr5_3:10105502-10105521 Msa0797810:intron 40.0%
TTTACTACCTCTCACACTCA+GGG - chr5_3:10105536-10105555 None:intergenic 40.0%
!! ACAAAGTCTCCCTTTTGGAA+GGG - chr5_3:10105978-10105997 None:intergenic 40.0%
! AACAAAGTCTCCCTTTTGGA+AGG - chr5_3:10105979-10105998 None:intergenic 40.0%
! TCAGAACAAAGTCTCCCTTT+TGG - chr5_3:10105983-10106002 None:intergenic 40.0%
! TCTGAAGTGCAAAGAAGGTT+TGG + chr5_3:10105998-10106017 Msa0797810:intron 40.0%
! AAGTGCAAAGAAGGTTTGGT+TGG + chr5_3:10106002-10106021 Msa0797810:intron 40.0%
CAAGCAAGACAAAAGAGATG+TGG - chr5_3:10106581-10106600 None:intergenic 40.0%
CATCAAACAAAGGTAGATGG+TGG - chr5_3:10106624-10106643 None:intergenic 40.0%
GTGCTCTCTTCATCAAACAA+AGG - chr5_3:10106634-10106653 None:intergenic 40.0%
GCTGAATGACTCTTATGAGT+TGG - chr5_3:10106858-10106877 None:intergenic 40.0%
CACATGGAGAGAAGAAAATG+TGG + chr5_3:10107055-10107074 Msa0797810:intron 40.0%
AACCAATAGGCTGTAACAAC+AGG + chr5_3:10107136-10107155 Msa0797810:intron 40.0%
ACCAATAGGCTGTAACAACA+GGG + chr5_3:10107137-10107156 Msa0797810:intron 40.0%
! TTTTTGCAGGGAAGTGAATG+AGG + chr5_3:10107331-10107350 Msa0797810:intron 40.0%
AGGGAAGTGAATGAGGAATA+TGG + chr5_3:10107338-10107357 Msa0797810:intron 40.0%
AAAGACATATCTGTGTGTGG+AGG - chr5_3:10107530-10107549 None:intergenic 40.0%
!! TGTGAATGACAAGGGCATTA+GGG - chr5_3:10107631-10107650 None:intergenic 40.0%
!! ATGTGAATGACAAGGGCATT+AGG - chr5_3:10107632-10107651 None:intergenic 40.0%
AATGCCCTTGTCATTCACAT+TGG + chr5_3:10107632-10107651 Msa0797810:CDS 40.0%
GTCACCAATGTGAATGACAA+GGG - chr5_3:10107639-10107658 None:intergenic 40.0%
! CATTCACATTGGTGACCAAA+TGG + chr5_3:10107643-10107662 Msa0797810:CDS 40.0%
AAGGACATGTTAAACATCGG+AGG - chr5_3:10108007-10108026 None:intergenic 40.0%
!! TCAAGCTATTTTGTCGCATG+TGG - chr5_3:10108046-10108065 None:intergenic 40.0%
TGATCAACAACCAGCAACTA+AGG + chr5_3:10108297-10108316 Msa0797810:intron 40.0%
GATCAACAACCAGCAACTAA+GGG + chr5_3:10108298-10108317 Msa0797810:intron 40.0%
TGGAGGCCTCAATTATTTGT+AGG + chr5_3:10108465-10108484 Msa0797810:intron 40.0%
GGAGGCCTCAATTATTTGTA+GGG + chr5_3:10108466-10108485 Msa0797810:intron 40.0%
GAGGCCTCAATTATTTGTAG+GGG + chr5_3:10108467-10108486 Msa0797810:intron 40.0%
AAGATGAGACAAGAATGTCG+TGG + chr5_3:10108726-10108745 Msa0797810:CDS 40.0%
TGGTTAACAAACTTTGGGTG+AGG - chr5_3:10108791-10108810 None:intergenic 40.0%
AGCATTTCTTCCTTCACTGA+GGG - chr5_3:10108883-10108902 None:intergenic 40.0%
AGTCCAAGGTGTGAAACTTG+AGG + chr5_3:10104575-10104594 Msa0797810:CDS 45.0%
GTACCTCAAGTTTCACACCT+TGG - chr5_3:10104581-10104600 None:intergenic 45.0%
ACCTGTTGGGTCTGATTCAT+TGG + chr5_3:10104785-10104804 Msa0797810:CDS 45.0%
TCCAATGAATCAGACCCAAC+AGG - chr5_3:10104789-10104808 None:intergenic 45.0%
GTTGGGTCTGATTCATTGGA+AGG + chr5_3:10104789-10104808 Msa0797810:CDS 45.0%
AGGTGAATGGGAAGAAAGGT+TGG + chr5_3:10104835-10104854 Msa0797810:CDS 45.0%
GGTGAATGGGAAGAAAGGTT+GGG + chr5_3:10104836-10104855 Msa0797810:CDS 45.0%
! CCTCTGGGGATAAATATAGG+TGG - chr5_3:10105500-10105519 None:intergenic 45.0%
CCACCTATATTTATCCCCAG+AGG + chr5_3:10105497-10105516 Msa0797810:intron 45.0%
! CAGCCTCTGGGGATAAATAT+AGG - chr5_3:10105503-10105522 None:intergenic 45.0%
CTATATTTATCCCCAGAGGC+TGG + chr5_3:10105501-10105520 Msa0797810:intron 45.0%
TTACTACCTCTCACACTCAG+GGG - chr5_3:10105535-10105554 None:intergenic 45.0%
CTTTACTACCTCTCACACTC+AGG - chr5_3:10105537-10105556 None:intergenic 45.0%
TCCCTGTTGTTACAGCCTAT+TGG - chr5_3:10107141-10107160 None:intergenic 45.0%
CATGAACTTAAGGAAGCTGC+AGG + chr5_3:10107428-10107447 Msa0797810:CDS 45.0%
ACAAGATCAGGAACTGGACA+TGG - chr5_3:10107497-10107516 None:intergenic 45.0%
CCTAGAACAAGATCAGGAAC+TGG - chr5_3:10107503-10107522 None:intergenic 45.0%
CCAGTTCCTGATCTTGTTCT+AGG + chr5_3:10107500-10107519 Msa0797810:CDS 45.0%
CACTTCATTGGGGACCAAAA+TGG - chr5_3:10107558-10107577 None:intergenic 45.0%
TGAAGACCCTGCACTTCATT+GGG - chr5_3:10107569-10107588 None:intergenic 45.0%
TTGAAGACCCTGCACTTCAT+TGG - chr5_3:10107570-10107589 None:intergenic 45.0%
ATACCATTGACCACCTCTAG+AGG - chr5_3:10107594-10107613 None:intergenic 45.0%
GGTCACCAATGTGAATGACA+AGG - chr5_3:10107640-10107659 None:intergenic 45.0%
! TCACATTGGTGACCAAATGG+AGG + chr5_3:10107646-10107665 Msa0797810:CDS 45.0%
! TGTTGATAGAGCTGTATCCG+TGG - chr5_3:10107871-10107890 None:intergenic 45.0%
! ACAAAGGAAGGGTATGTGAG+TGG + chr5_3:10108238-10108257 Msa0797810:intron 45.0%
! AAGGGTATGTGAGTGGTTGT+TGG + chr5_3:10108245-10108264 Msa0797810:intron 45.0%
!! GAGTGGTTGTTGGTTCCTTA+AGG + chr5_3:10108255-10108274 Msa0797810:intron 45.0%
AGAGTCGAGCCTCCAATTTA+TGG + chr5_3:10108445-10108464 Msa0797810:intron 45.0%
TTGAGGCCTCCATAAATTGG+AGG - chr5_3:10108457-10108476 None:intergenic 45.0%
!! CCAACTTCTTGTTCTGGCTT+TGG - chr5_3:10108767-10108786 None:intergenic 45.0%
CCAAAGCCAGAACAAGAAGT+TGG + chr5_3:10108764-10108783 Msa0797810:CDS 45.0%
TGAGGACCAACTTCTTGTTC+TGG - chr5_3:10108773-10108792 None:intergenic 45.0%
GAGCATTTCTTCCTTCACTG+AGG - chr5_3:10108884-10108903 None:intergenic 45.0%
!!! TTTATTTTATAAAATCAATT+AGG + chr5_3:10106800-10106819 Msa0797810:intron 5.0%
! CCTTGGACTGTTGTTGTTCC+TGG - chr5_3:10104564-10104583 None:intergenic 50.0%
CCAGGAACAACAACAGTCCA+AGG + chr5_3:10104561-10104580 Msa0797810:CDS 50.0%
CGGGGTTTGTAGGCCAAAAA+CGG - chr5_3:10104908-10104927 None:intergenic 50.0%
CTGTAAGAAGCGGGGTTTGT+AGG - chr5_3:10104918-10104937 None:intergenic 50.0%
CTACAAACCCCGCTTCTTAC+AGG + chr5_3:10104916-10104935 Msa0797810:CDS 50.0%
CATATACCCCTGAGTGTGAG+AGG + chr5_3:10105526-10105545 Msa0797810:intron 50.0%
TGGCAAGTACCTACGTGAAG+TGG + chr5_3:10107358-10107377 Msa0797810:CDS 50.0%
! GTTTGTCTGCCACTTCACGT+AGG - chr5_3:10107370-10107389 None:intergenic 50.0%
GAACTTAAGGAAGCTGCAGG+TGG + chr5_3:10107431-10107450 Msa0797810:CDS 50.0%
GATCAGGAACTGGACATGGT+GGG - chr5_3:10107493-10107512 None:intergenic 50.0%
AGATCAGGAACTGGACATGG+TGG - chr5_3:10107494-10107513 None:intergenic 50.0%
GGCACACCTAGAACAAGATC+AGG - chr5_3:10107509-10107528 None:intergenic 50.0%
TTTGGTCCCCAATGAAGTGC+AGG + chr5_3:10107559-10107578 Msa0797810:CDS 50.0%
TTGGTCCCCAATGAAGTGCA+GGG + chr5_3:10107560-10107579 Msa0797810:CDS 50.0%
GAAGACCCTGCACTTCATTG+GGG - chr5_3:10107568-10107587 None:intergenic 50.0%
! AAGCCTCTAGAGGTGGTCAA+TGG + chr5_3:10107588-10107607 Msa0797810:CDS 50.0%
! GCTAAAGTGCCCTTAGTTGC+TGG - chr5_3:10108310-10108329 None:intergenic 50.0%
TGGTTATCAGAGCCGTTCCT+TGG + chr5_3:10108402-10108421 Msa0797810:intron 50.0%
CCTTTGCACATGCCAAGGAA+CGG - chr5_3:10108417-10108436 None:intergenic 50.0%
GTCGAGCCTCCAATTTATGG+AGG + chr5_3:10108448-10108467 Msa0797810:intron 50.0%
!! GGCTTTGGCTCTATGAACAC+TGG - chr5_3:10108752-10108771 None:intergenic 50.0%
GGTATATGTCCCAGCCTCTG+GGG - chr5_3:10105514-10105533 None:intergenic 55.0%
GGGTATATGTCCCAGCCTCT+GGG - chr5_3:10105515-10105534 None:intergenic 55.0%
CAGGGTCTTCAAGCCTCTAG+AGG + chr5_3:10107578-10107597 Msa0797810:CDS 55.0%
! GGTCTTCAAGCCTCTAGAGG+TGG + chr5_3:10107581-10107600 Msa0797810:CDS 55.0%
CCGTTCCTTGGCATGTGCAA+AGG + chr5_3:10108414-10108433 Msa0797810:intron 55.0%
GAGCTCCTTTGCACATGCCA+AGG - chr5_3:10108422-10108441 None:intergenic 55.0%
GGGGTATATGTCCCAGCCTC+TGG - chr5_3:10105516-10105535 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 10104411 10109096 10104411 ID=Msa0797810;Name=Msa0797810
chr5_3 mRNA 10104411 10109096 10104411 ID=Msa0797810-mRNA-1;Parent=Msa0797810;Name=Msa0797810-mRNA-1;_AED=0.30;_eAED=0.30;_QI=57|1|1|1|1|1|3|207|337
chr5_3 exon 10104411 10104937 10104411 ID=Msa0797810-mRNA-1:exon:4313;Parent=Msa0797810-mRNA-1
chr5_3 exon 10107340 10107667 10107340 ID=Msa0797810-mRNA-1:exon:4314;Parent=Msa0797810-mRNA-1
chr5_3 exon 10108674 10109096 10108674 ID=Msa0797810-mRNA-1:exon:4315;Parent=Msa0797810-mRNA-1
chr5_3 five_prime_UTR 10104411 10104467 10104411 ID=Msa0797810-mRNA-1:five_prime_utr;Parent=Msa0797810-mRNA-1
chr5_3 CDS 10104468 10104937 10104468 ID=Msa0797810-mRNA-1:cds;Parent=Msa0797810-mRNA-1
chr5_3 CDS 10107340 10107667 10107340 ID=Msa0797810-mRNA-1:cds;Parent=Msa0797810-mRNA-1
chr5_3 CDS 10108674 10108889 10108674 ID=Msa0797810-mRNA-1:cds;Parent=Msa0797810-mRNA-1
chr5_3 three_prime_UTR 10108890 10109096 10108890 ID=Msa0797810-mRNA-1:three_prime_utr;Parent=Msa0797810-mRNA-1
Gene Sequence

>Msa0797810

ATGGAGGTTCTAAGGGTACAAACAATAGCTCATCAATCAAAAGATGCTACATCTACAATCCCATCCATGTTCCTTAGATCAGAAACTGAATCACCAGGAACAACAACAGTCCAAGGTGTGAAACTTGAGGTACCTATAATAGATTTCAGCAACCCTGATAAAGAAAAAATACAAAATGAAATAATGGAAGCAAGTACAAAATGGGGAATGTTTCAAATTGTGAACCATGAAATTCCAAATGAAGTTATAAAAAAGTTACAAAGTGTTGGTAAAGAGTTTTTTGAGTTACCACAAGATGAAAAAGAGGTTATTGCTAAACCTGTTGGGTCTGATTCATTGGAAGGGTATGGTACAAAACTTCAAAAAGAGGTGAATGGGAAGAAAGGTTGGGTAGATCATTTGTTTCATATTATATGGCCACCTTCTTCCATTAATTACCGTTTTTGGCCTACAAACCCCGCTTCTTACAGGGAAGTGAATGAGGAATATGGCAAGTACCTACGTGAAGTGGCAGACAAACTATTCAAAAGTTTGTCAACTGGTCTTGGGCTTGAAGAACATGAACTTAAGGAAGCTGCAGGTGGAGATGAGTTGATTCACTTGTTGAAAATCAACTACTACCCACCATGTCCAGTTCCTGATCTTGTTCTAGGTGTGCCTCCACACACAGATATGTCTTTTCTTACCATTTTGGTCCCCAATGAAGTGCAGGGTCTTCAAGCCTCTAGAGGTGGTCAATGGTATGATGTTAAGTATGTCCCTAATGCCCTTGTCATTCACATTGGTGACCAAATGGAGATACTGAGCAATGGAAAATATAAGGCTGTATTGCACAGAACAACAGTGAACAAAGATGAGACAAGAATGTCGTGGCCAGTGTTCATAGAGCCAAAGCCAGAACAAGAAGTTGGTCCTCACCCAAAGTTTGTTAACCAAGACAATATTCCTCCAAAGTACAAAACAAAGAAATATAAGGATTATCTTTATTGTAAGCTTAATAAGATCCCTCAGTGA
Protein sequence

>Msa0797810

MEVLRVQTIAHQSKDATSTIPSMFLRSETESPGTTTVQGVKLEVPIIDFSNPDKEKIQNEIMEASTKWGMFQIVNHEIPNEVIKKLQSVGKEFFELPQDEKEVIAKPVGSDSLEGYGTKLQKEVNGKKGWVDHLFHIIWPPSSINYRFWPTNPASYREVNEEYGKYLREVADKLFKSLSTGLGLEEHELKEAAGGDELIHLLKINYYPPCPVPDLVLGVPPHTDMSFLTILVPNEVQGLQASRGGQWYDVKYVPNALVIHIGDQMEILSNGKYKAVLHRTTVNKDETRMSWPVFIEPKPEQEVGPHPKFVNQDNIPPKYKTKKYKDYLYCKLNKIPQ*