Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568170 | XP_003630125.1 | 99.071 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568170 | sp|Q94AG6|SAMC1_ARATH | 78.481 | 316 | 62 | 2 | 1 | 310 | 1 | 316 | 1.06e-175 | 492 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568170 | G7LBC1 | 99.071 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004350 | Msa0568170 | 0.803859 | 2.850277e-49 | -8.615850e-47 |
| Msa0005690 | Msa0568170 | 0.801096 | 1.057996e-48 | -8.615850e-47 |
| Msa0017420 | Msa0568170 | 0.833261 | 5.903668e-56 | -8.615850e-47 |
| Msa0018870 | Msa0568170 | 0.806578 | 7.685419e-50 | -8.615850e-47 |
| Msa0024330 | Msa0568170 | 0.811145 | 8.105947e-51 | -8.615850e-47 |
| Msa0045660 | Msa0568170 | 0.810196 | 1.300099e-50 | -8.615850e-47 |
| Msa0046360 | Msa0568170 | 0.807193 | 5.696234e-50 | -8.615850e-47 |
| Msa0056160 | Msa0568170 | 0.801512 | 8.696110e-49 | -8.615850e-47 |
| Msa0060350 | Msa0568170 | 0.810215 | 1.287963e-50 | -8.615850e-47 |
| Msa0062750 | Msa0568170 | 0.812806 | 3.523122e-51 | -8.615850e-47 |
| Msa0065690 | Msa0568170 | 0.819523 | 1.110930e-52 | -8.615850e-47 |
| Msa0072910 | Msa0568170 | 0.807581 | 4.713485e-50 | -8.615850e-47 |
| Msa0094700 | Msa0568170 | 0.801308 | 9.571736e-49 | -8.615850e-47 |
| Msa0098190 | Msa0568170 | 0.822667 | 2.094993e-53 | -8.615850e-47 |
| Msa0107460 | Msa0568170 | 0.828867 | 7.082459e-55 | -8.615850e-47 |
| Msa0130800 | Msa0568170 | 0.803727 | 3.035848e-49 | -8.615850e-47 |
| Msa0131390 | Msa0568170 | 0.848588 | 5.570205e-60 | -8.615850e-47 |
| Msa0139050 | Msa0568170 | 0.802507 | 5.428187e-49 | -8.615850e-47 |
| Msa0143970 | Msa0568170 | 0.802925 | 4.450262e-49 | -8.615850e-47 |
| Msa0143980 | Msa0568170 | 0.807759 | 4.321280e-50 | -8.615850e-47 |
| Msa0146180 | Msa0568170 | 0.828843 | 7.175070e-55 | -8.615850e-47 |
| Msa0147550 | Msa0568170 | 0.807151 | 5.813333e-50 | -8.615850e-47 |
| Msa0147990 | Msa0568170 | 0.836614 | 8.439860e-57 | -8.615850e-47 |
| Msa0155030 | Msa0568170 | 0.821897 | 3.161467e-53 | -8.615850e-47 |
| Msa0163410 | Msa0568170 | 0.811056 | 8.473241e-51 | -8.615850e-47 |
| Msa0170680 | Msa0568170 | 0.801497 | 8.754834e-49 | -8.615850e-47 |
| Msa0173760 | Msa0568170 | 0.808170 | 3.531711e-50 | -8.615850e-47 |
| Msa0173850 | Msa0568170 | 0.802054 | 6.730118e-49 | -8.615850e-47 |
| Msa0175530 | Msa0568170 | 0.801286 | 9.671696e-49 | -8.615850e-47 |
| Msa0176710 | Msa0568170 | 0.822386 | 2.435642e-53 | -8.615850e-47 |
| Msa0177490 | Msa0568170 | 0.843352 | 1.477440e-58 | -8.615850e-47 |
| Msa0181020 | Msa0568170 | 0.833352 | 5.602240e-56 | -8.615850e-47 |
| Msa0185550 | Msa0568170 | 0.804771 | 1.841189e-49 | -8.615850e-47 |
| Msa0194570 | Msa0568170 | 0.821506 | 3.893672e-53 | -8.615850e-47 |
| Msa0206940 | Msa0568170 | 0.836917 | 7.064519e-57 | -8.615850e-47 |
| Msa0224370 | Msa0568170 | 0.801858 | 7.383560e-49 | -8.615850e-47 |
| Msa0224960 | Msa0568170 | 0.802919 | 4.464952e-49 | -8.615850e-47 |
| Msa0226800 | Msa0568170 | 0.844675 | 6.526411e-59 | -8.615850e-47 |
| Msa0227290 | Msa0568170 | 0.802136 | 6.472076e-49 | -8.615850e-47 |
| Msa0365150 | Msa0568170 | 0.808214 | 3.457226e-50 | -8.615850e-47 |
| Msa0380360 | Msa0568170 | 0.831566 | 1.552813e-55 | -8.615850e-47 |
| Msa0393140 | Msa0568170 | 0.825946 | 3.552586e-54 | -8.615850e-47 |
| Msa0426480 | Msa0568170 | 0.808765 | 2.637103e-50 | -8.615850e-47 |
| Msa0438440 | Msa0568170 | 0.806915 | 6.521708e-50 | -8.615850e-47 |
| Msa0446480 | Msa0568170 | 0.801167 | 1.023129e-48 | -8.615850e-47 |
| Msa0469270 | Msa0568170 | 0.826535 | 2.572656e-54 | -8.615850e-47 |
| Msa0475740 | Msa0568170 | 0.801654 | 8.131486e-49 | -8.615850e-47 |
| Msa0476150 | Msa0568170 | 0.805140 | 1.541520e-49 | -8.615850e-47 |
| Msa0476180 | Msa0568170 | 0.834807 | 2.420252e-56 | -8.615850e-47 |
| Msa0250520 | Msa0568170 | 0.810684 | 1.020017e-50 | -8.615850e-47 |
| Msa0258380 | Msa0568170 | 0.830178 | 3.398837e-55 | -8.615850e-47 |
| Msa0283670 | Msa0568170 | 0.811704 | 6.128994e-51 | -8.615850e-47 |
| Msa0298970 | Msa0568170 | 0.800468 | 1.421309e-48 | -8.615850e-47 |
| Msa0307620 | Msa0568170 | 0.815604 | 8.488682e-52 | -8.615850e-47 |
| Msa0311570 | Msa0568170 | 0.804495 | 2.101473e-49 | -8.615850e-47 |
| Msa0312780 | Msa0568170 | 0.808846 | 2.534527e-50 | -8.615850e-47 |
| Msa0314790 | Msa0568170 | 0.813354 | 2.670480e-51 | -8.615850e-47 |
| Msa0327900 | Msa0568170 | 0.810487 | 1.124980e-50 | -8.615850e-47 |
| Msa0350020 | Msa0568170 | 0.823813 | 1.131687e-53 | -8.615850e-47 |
| Msa0352200 | Msa0568170 | 0.819396 | 1.187533e-52 | -8.615850e-47 |
| Msa0358720 | Msa0568170 | 0.803486 | 3.406449e-49 | -8.615850e-47 |
| Msa0495510 | Msa0568170 | 0.822999 | 1.754040e-53 | -8.615850e-47 |
| Msa0504730 | Msa0568170 | 0.803202 | 3.901232e-49 | -8.615850e-47 |
| Msa0512310 | Msa0568170 | 0.802118 | 6.530438e-49 | -8.615850e-47 |
| Msa0528740 | Msa0568170 | 0.836170 | 1.094659e-56 | -8.615850e-47 |
| Msa0542040 | Msa0568170 | 0.801994 | 6.923415e-49 | -8.615850e-47 |
| Msa0549740 | Msa0568170 | 0.810710 | 1.006673e-50 | -8.615850e-47 |
| Msa0553520 | Msa0568170 | 0.827683 | 1.366537e-54 | -8.615850e-47 |
| Msa0555940 | Msa0568170 | 0.813872 | 2.054126e-51 | -8.615850e-47 |
| Msa0555980 | Msa0568170 | 0.819138 | 1.359411e-52 | -8.615850e-47 |
| Msa0560200 | Msa0568170 | 0.804710 | 1.895855e-49 | -8.615850e-47 |
| Msa0567290 | Msa0568170 | 0.835752 | 1.397266e-56 | -8.615850e-47 |
| Msa0568120 | Msa0568170 | 0.822682 | 2.078696e-53 | -8.615850e-47 |
| Msa0568170 | Msa0568490 | 0.834232 | 3.375202e-56 | -8.615850e-47 |
| Msa0568170 | Msa0568810 | 0.816738 | 4.737352e-52 | -8.615850e-47 |
| Msa0568170 | Msa0568970 | 0.835263 | 1.857884e-56 | -8.615850e-47 |
| Msa0568170 | Msa0569030 | 0.833895 | 4.100519e-56 | -8.615850e-47 |
| Msa0568170 | Msa0570490 | 0.836919 | 7.054506e-57 | -8.615850e-47 |
| Msa0568170 | Msa0572820 | 0.810735 | 9.944199e-51 | -8.615850e-47 |
| Msa0568170 | Msa0573300 | 0.836192 | 1.081035e-56 | -8.615850e-47 |
| Msa0568170 | Msa0573970 | 0.802254 | 6.121066e-49 | -8.615850e-47 |
| Msa0568170 | Msa0574170 | 0.824283 | 8.776464e-54 | -8.615850e-47 |
| Msa0568170 | Msa0575450 | 0.837604 | 4.711524e-57 | -8.615850e-47 |
| Msa0568170 | Msa0576420 | 0.812945 | 3.283497e-51 | -8.615850e-47 |
| Msa0568170 | Msa0579610 | 0.806362 | 8.535412e-50 | -8.615850e-47 |
| Msa0568170 | Msa0606200 | 0.808685 | 2.742961e-50 | -8.615850e-47 |
| Msa0568170 | Msa0607280 | 0.809856 | 1.538594e-50 | -8.615850e-47 |
| Msa0568170 | Msa0607300 | 0.810796 | 9.647108e-51 | -8.615850e-47 |
| Msa0568170 | Msa0607440 | 0.801805 | 7.572074e-49 | -8.615850e-47 |
| Msa0568170 | Msa0621770 | 0.807521 | 4.852857e-50 | -8.615850e-47 |
| Msa0568170 | Msa0622390 | 0.809270 | 2.055709e-50 | -8.615850e-47 |
| Msa0568170 | Msa0622690 | 0.805854 | 1.091569e-49 | -8.615850e-47 |
| Msa0568170 | Msa0623270 | 0.805451 | 1.326330e-49 | -8.615850e-47 |
| Msa0568170 | Msa0631340 | 0.801878 | 7.313489e-49 | -8.615850e-47 |
| Msa0568170 | Msa0635350 | 0.806599 | 7.607237e-50 | -8.615850e-47 |
| Msa0568170 | Msa0650360 | 0.845913 | 3.017963e-59 | -8.615850e-47 |
| Msa0568170 | Msa0668160 | 0.833496 | 5.159286e-56 | -8.615850e-47 |
| Msa0568170 | Msa0672350 | 0.807988 | 3.861981e-50 | -8.615850e-47 |
| Msa0568170 | Msa0687540 | 0.809756 | 1.616746e-50 | -8.615850e-47 |
| Msa0568170 | Msa0687620 | 0.815310 | 9.870368e-52 | -8.615850e-47 |
| Msa0568170 | Msa0690350 | 0.823917 | 1.069628e-53 | -8.615850e-47 |
| Msa0568170 | Msa0707780 | 0.811440 | 6.995579e-51 | -8.615850e-47 |
| Msa0568170 | Msa0709480 | 0.802815 | 4.691152e-49 | -8.615850e-47 |
| Msa0568170 | Msa0756480 | 0.801765 | 7.715878e-49 | -8.615850e-47 |
| Msa0568170 | Msa0780140 | 0.804747 | 1.862450e-49 | -8.615850e-47 |
| Msa0568170 | Msa0789800 | 0.815116 | 1.089858e-51 | -8.615850e-47 |
| Msa0568170 | Msa0790180 | 0.800285 | 1.548378e-48 | -8.615850e-47 |
| Msa0568170 | Msa0790830 | 0.810483 | 1.127238e-50 | -8.615850e-47 |
| Msa0568170 | Msa0800130 | 0.805059 | 1.602679e-49 | -8.615850e-47 |
| Msa0568170 | Msa0824140 | 0.824192 | 9.222124e-54 | -8.615850e-47 |
| Msa0568170 | Msa0836200 | 0.816983 | 4.173967e-52 | -8.615850e-47 |
| Msa0568170 | Msa0840630 | 0.801170 | 1.021491e-48 | -8.615850e-47 |
| Msa0568170 | Msa0863250 | 0.824892 | 6.309704e-54 | -8.615850e-47 |
| Msa0568170 | Msa0864150 | 0.803201 | 3.903297e-49 | -8.615850e-47 |
| Msa0568170 | Msa0873830 | 0.813626 | 2.327039e-51 | -8.615850e-47 |
| Msa0568170 | Msa0901140 | 0.803633 | 3.176600e-49 | -8.615850e-47 |
| Msa0568170 | Msa0929400 | 0.804298 | 2.310346e-49 | -8.615850e-47 |
| Msa0568170 | Msa0949780 | 0.805737 | 1.155432e-49 | -8.615850e-47 |
| Msa0568170 | Msa0950410 | 0.811921 | 5.497065e-51 | -8.615850e-47 |
| Msa0568170 | Msa0966410 | 0.801507 | 8.716791e-49 | -8.615850e-47 |
| Msa0568170 | Msa0975080 | 0.813043 | 3.125306e-51 | -8.615850e-47 |
| Msa0568170 | Msa1030440 | 0.812716 | 3.684831e-51 | -8.615850e-47 |
| Msa0568170 | Msa1061520 | 0.801869 | 7.346047e-49 | -8.615850e-47 |
| Msa0568170 | Msa1069440 | 0.810968 | 8.854189e-51 | -8.615850e-47 |
| Msa0568170 | Msa1069450 | 0.833389 | 5.486453e-56 | -8.615850e-47 |
| Msa0568170 | Msa1080620 | 0.802167 | 6.379130e-49 | -8.615850e-47 |
| Msa0568170 | Msa1081700 | 0.811791 | 5.868191e-51 | -8.615850e-47 |
| Msa0568170 | Msa1083140 | 0.804883 | 1.744542e-49 | -8.615850e-47 |
| Msa0568170 | Msa1084490 | 0.809741 | 1.628790e-50 | -8.615850e-47 |
| Msa0568170 | Msa1093390 | 0.805089 | 1.579376e-49 | -8.615850e-47 |
| Msa0568170 | Msa1125780 | 0.804544 | 2.053109e-49 | -8.615850e-47 |
| Msa0568170 | Msa1125950 | 0.804703 | 1.902388e-49 | -8.615850e-47 |
| Msa0568170 | Msa1130650 | 0.849308 | 3.514512e-60 | -8.615850e-47 |
| Msa0568170 | Msa1130660 | 0.802499 | 5.449660e-49 | -8.615850e-47 |
| Msa0568170 | Msa1130730 | 0.837869 | 4.029098e-57 | -8.615850e-47 |
| Msa0568170 | Msa1145370 | 0.814887 | 1.225273e-51 | -8.615850e-47 |
| Msa0568170 | Msa1165810 | 0.807561 | 4.760022e-50 | -8.615850e-47 |
| Msa0568170 | Msa1166180 | 0.804648 | 1.953144e-49 | -8.615850e-47 |
| Msa0568170 | Msa1166280 | 0.807775 | 4.286796e-50 | -8.615850e-47 |
| Msa0568170 | Msa1171340 | 0.801677 | 8.044379e-49 | -8.615850e-47 |
| Msa0568170 | Msa1184740 | 0.806208 | 9.199165e-50 | -8.615850e-47 |
| Msa0568170 | Msa1206560 | 0.818712 | 1.698687e-52 | -8.615850e-47 |
| Msa0568170 | Msa1209790 | 0.802683 | 4.993052e-49 | -8.615850e-47 |
| Msa0568170 | Msa1222580 | 0.818058 | 2.389628e-52 | -8.615850e-47 |
| Msa0568170 | Msa1233770 | 0.806490 | 8.019302e-50 | -8.615850e-47 |
| Msa0568170 | Msa1238710 | 0.819340 | 1.222634e-52 | -8.615850e-47 |
| Msa0568170 | Msa1259470 | 0.816884 | 4.392855e-52 | -8.615850e-47 |
| Msa0568170 | Msa1262310 | 0.820505 | 6.620547e-53 | -8.615850e-47 |
| Msa0568170 | Msa1268370 | 0.805200 | 1.497053e-49 | -8.615850e-47 |
| Msa0568170 | Msa1276080 | 0.803502 | 3.381488e-49 | -8.615850e-47 |
| Msa0568170 | Msa1279340 | 0.852515 | 4.387871e-61 | -8.615850e-47 |
| Msa0568170 | Msa1287340 | 0.804046 | 2.606252e-49 | -8.615850e-47 |
| Msa0568170 | Msa1292620 | 0.802517 | 5.404241e-49 | -8.615850e-47 |
| Msa0568170 | Msa1316720 | 0.813494 | 2.487775e-51 | -8.615850e-47 |
| Msa0568170 | Msa1326000 | 0.806260 | 8.966634e-50 | -8.615850e-47 |
| Msa0568170 | Msa1356730 | 0.801087 | 1.062528e-48 | -8.615850e-47 |
| Msa0568170 | Msa1365120 | 0.802147 | 6.440704e-49 | -8.615850e-47 |
| Msa0568170 | Msa1366700 | 0.803112 | 4.072522e-49 | -8.615850e-47 |
| Msa0568170 | Msa1371840 | 0.813308 | 2.732976e-51 | -8.615850e-47 |
| Msa0568170 | Msa1376350 | 0.801008 | 1.102554e-48 | -8.615850e-47 |
| Msa0568170 | Msa1392680 | 0.807184 | 5.720778e-50 | -8.615850e-47 |
| Msa0568170 | Msa1403900 | 0.804636 | 1.963812e-49 | -8.615850e-47 |
| Msa0568170 | Msa1407710 | 0.834495 | 2.900350e-56 | -8.615850e-47 |
| Msa0568170 | Msa1410170 | 0.807119 | 5.906408e-50 | -8.615850e-47 |
| Msa0568170 | Msa1418200 | 0.830069 | 3.613402e-55 | -8.615850e-47 |
| Msa0568170 | Msa1422500 | 0.819123 | 1.370343e-52 | -8.615850e-47 |
| Msa0568170 | Msa1430760 | 0.805431 | 1.339296e-49 | -8.615850e-47 |
| Msa0568170 | Msa1435470 | 0.807505 | 4.892193e-50 | -8.615850e-47 |
| Msa0568170 | Msa1458920 | 0.812028 | 5.208886e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568170 | MtrunA17_Chr8g0383321 | 99.071 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 0.0 | 647 |
| Msa0568170 | MtrunA17_Chr1g0201361 | 70.732 | 287 | 82 | 2 | 31 | 316 | 29 | 314 | 7.37e-152 | 429 |
| Msa0568170 | MtrunA17_Chr8g0386871 | 33.208 | 265 | 161 | 5 | 50 | 299 | 318 | 581 | 9.02e-41 | 150 |
| Msa0568170 | MtrunA17_Chr3g0086811 | 30.747 | 348 | 187 | 7 | 32 | 325 | 5 | 352 | 4.48e-39 | 141 |
| Msa0568170 | MtrunA17_Chr6g0463351 | 35.510 | 245 | 129 | 6 | 66 | 285 | 81 | 321 | 2.32e-36 | 134 |
| Msa0568170 | MtrunA17_Chr5g0431531 | 31.849 | 292 | 157 | 9 | 48 | 307 | 35 | 316 | 2.33e-33 | 125 |
| Msa0568170 | MtrunA17_Chr5g0431531 | 29.688 | 192 | 124 | 4 | 125 | 310 | 31 | 217 | 1.97e-16 | 79.0 |
| Msa0568170 | MtrunA17_Chr1g0200171 | 31.179 | 263 | 163 | 4 | 53 | 303 | 526 | 782 | 4.41e-32 | 126 |
| Msa0568170 | MtrunA17_Chr7g0269701 | 31.164 | 292 | 164 | 10 | 54 | 311 | 24 | 312 | 5.25e-26 | 105 |
| Msa0568170 | MtrunA17_Chr4g0004571 | 30.714 | 280 | 156 | 11 | 55 | 305 | 22 | 292 | 1.03e-23 | 99.0 |
| Msa0568170 | MtrunA17_Chr7g0219891 | 29.206 | 315 | 180 | 9 | 27 | 304 | 1 | 309 | 3.15e-23 | 97.8 |
| Msa0568170 | MtrunA17_Chr1g0149111 | 27.574 | 272 | 179 | 5 | 52 | 305 | 139 | 410 | 1.41e-22 | 97.4 |
| Msa0568170 | MtrunA17_Chr1g0195101 | 29.433 | 282 | 162 | 8 | 64 | 311 | 31 | 309 | 2.63e-22 | 95.1 |
| Msa0568170 | MtrunA17_Chr3g0137941 | 26.374 | 273 | 183 | 5 | 54 | 308 | 124 | 396 | 4.42e-22 | 95.9 |
| Msa0568170 | MtrunA17_Chr3g0137941 | 30.286 | 175 | 103 | 3 | 52 | 207 | 216 | 390 | 2.34e-14 | 73.2 |
| Msa0568170 | MtrunA17_Chr3g0137941 | 29.747 | 158 | 106 | 3 | 133 | 287 | 122 | 277 | 1.22e-13 | 71.2 |
| Msa0568170 | MtrunA17_Chr4g0063561 | 27.273 | 275 | 180 | 6 | 52 | 307 | 123 | 396 | 6.74e-22 | 95.1 |
| Msa0568170 | MtrunA17_Chr6g0455381 | 28.053 | 303 | 176 | 10 | 42 | 307 | 11 | 308 | 3.84e-21 | 92.0 |
| Msa0568170 | MtrunA17_Chr4g0028531 | 30.847 | 295 | 155 | 11 | 53 | 309 | 23 | 306 | 1.49e-20 | 90.5 |
| Msa0568170 | MtrunA17_Chr7g0241521 | 28.826 | 281 | 157 | 8 | 63 | 307 | 28 | 301 | 1.59e-20 | 90.1 |
| Msa0568170 | MtrunA17_Chr8g0385571 | 29.032 | 279 | 168 | 7 | 53 | 305 | 228 | 502 | 2.68e-20 | 91.3 |
| Msa0568170 | MtrunA17_Chr7g0252401 | 28.014 | 282 | 172 | 6 | 49 | 305 | 204 | 479 | 2.97e-20 | 91.3 |
| Msa0568170 | MtrunA17_Chr8g0347451 | 26.205 | 332 | 193 | 8 | 1 | 282 | 1 | 330 | 6.16e-20 | 89.4 |
| Msa0568170 | MtrunA17_Chr8g0347451 | 28.125 | 192 | 124 | 3 | 133 | 310 | 51 | 242 | 8.30e-18 | 83.2 |
| Msa0568170 | MtrunA17_Chr5g0423111 | 30.851 | 282 | 156 | 10 | 64 | 310 | 33 | 310 | 1.49e-19 | 88.2 |
| Msa0568170 | MtrunA17_Chr5g0396801 | 25.731 | 342 | 200 | 8 | 11 | 305 | 4 | 338 | 2.59e-19 | 87.4 |
| Msa0568170 | MtrunA17_Chr5g0396801 | 29.293 | 198 | 126 | 3 | 127 | 310 | 32 | 229 | 2.92e-18 | 84.3 |
| Msa0568170 | MtrunA17_Chr8g0343381 | 26.797 | 306 | 166 | 9 | 62 | 309 | 43 | 348 | 4.64e-19 | 86.7 |
| Msa0568170 | MtrunA17_Chr8g0372531 | 28.723 | 282 | 155 | 7 | 66 | 305 | 28 | 305 | 4.88e-19 | 85.9 |
| Msa0568170 | MtrunA17_Chr4g0000261 | 26.543 | 324 | 191 | 11 | 26 | 309 | 41 | 357 | 9.82e-19 | 85.9 |
| Msa0568170 | MtrunA17_Chr2g0331771 | 31.474 | 251 | 145 | 8 | 55 | 281 | 162 | 409 | 2.71e-18 | 85.1 |
| Msa0568170 | MtrunA17_Chr4g0008061 | 27.143 | 280 | 157 | 8 | 63 | 304 | 26 | 296 | 3.49e-18 | 83.6 |
| Msa0568170 | MtrunA17_Chr3g0131501 | 26.619 | 278 | 176 | 6 | 53 | 305 | 206 | 480 | 9.02e-18 | 84.0 |
| Msa0568170 | MtrunA17_Chr3g0131501 | 30.000 | 180 | 101 | 6 | 52 | 207 | 299 | 477 | 1.24e-13 | 71.2 |
| Msa0568170 | MtrunA17_Chr2g0293621 | 25.362 | 276 | 169 | 8 | 66 | 304 | 43 | 318 | 1.73e-17 | 82.0 |
| Msa0568170 | MtrunA17_Chr4g0006851 | 25.225 | 222 | 158 | 5 | 87 | 306 | 144 | 359 | 7.24e-16 | 77.8 |
| Msa0568170 | MtrunA17_Chr4g0006851 | 27.586 | 145 | 93 | 3 | 168 | 308 | 134 | 270 | 4.94e-11 | 63.2 |
| Msa0568170 | MtrunA17_Chr6g0488081 | 32.178 | 202 | 118 | 6 | 125 | 307 | 10 | 211 | 2.73e-15 | 75.5 |
| Msa0568170 | MtrunA17_Chr6g0488081 | 21.406 | 313 | 198 | 6 | 34 | 305 | 1 | 306 | 7.61e-13 | 68.2 |
| Msa0568170 | MtrunA17_Chr5g0411411 | 30.500 | 200 | 108 | 5 | 38 | 207 | 96 | 294 | 3.96e-15 | 74.7 |
| Msa0568170 | MtrunA17_Chr5g0411411 | 27.338 | 278 | 157 | 11 | 43 | 282 | 4 | 274 | 1.15e-12 | 67.4 |
| Msa0568170 | MtrunA17_Chr5g0411411 | 29.064 | 203 | 125 | 4 | 133 | 316 | 9 | 211 | 1.19e-11 | 64.7 |
| Msa0568170 | MtrunA17_Chr3g0135861 | 24.759 | 311 | 189 | 9 | 38 | 305 | 21 | 329 | 1.40e-14 | 73.6 |
| Msa0568170 | MtrunA17_Chr7g0242311 | 24.481 | 241 | 173 | 6 | 87 | 324 | 142 | 376 | 1.67e-14 | 73.6 |
| Msa0568170 | MtrunA17_Chr7g0242311 | 30.939 | 181 | 109 | 6 | 139 | 308 | 93 | 268 | 4.31e-11 | 63.5 |
| Msa0568170 | MtrunA17_Chr4g0067231 | 23.780 | 328 | 185 | 9 | 39 | 305 | 2 | 325 | 5.36e-14 | 71.6 |
| Msa0568170 | MtrunA17_Chr3g0136041 | 24.510 | 306 | 173 | 8 | 62 | 309 | 42 | 347 | 6.87e-14 | 71.6 |
| Msa0568170 | MtrunA17_Chr4g0046981 | 27.076 | 277 | 155 | 6 | 49 | 284 | 9 | 279 | 7.04e-14 | 71.2 |
| Msa0568170 | MtrunA17_Chr4g0046981 | 26.531 | 196 | 128 | 4 | 128 | 308 | 7 | 201 | 1.22e-11 | 64.7 |
| Msa0568170 | MtrunA17_Chr8g0366791 | 29.368 | 269 | 148 | 10 | 53 | 282 | 9 | 274 | 1.52e-13 | 70.1 |
| Msa0568170 | MtrunA17_Chr8g0366791 | 31.013 | 158 | 97 | 4 | 56 | 207 | 143 | 294 | 3.29e-12 | 66.2 |
| Msa0568170 | MtrunA17_Chr2g0296061 | 22.045 | 313 | 178 | 7 | 54 | 305 | 17 | 324 | 2.62e-13 | 69.7 |
| Msa0568170 | MtrunA17_Chr3g0103681 | 26.552 | 290 | 177 | 8 | 47 | 303 | 10 | 296 | 3.24e-13 | 69.3 |
| Msa0568170 | MtrunA17_Chr3g0133111 | 23.344 | 317 | 182 | 8 | 45 | 307 | 3 | 312 | 1.20e-12 | 67.8 |
| Msa0568170 | MtrunA17_Chr5g0436041 | 28.713 | 202 | 128 | 4 | 124 | 309 | 25 | 226 | 1.79e-12 | 67.4 |
| Msa0568170 | MtrunA17_Chr5g0436041 | 28.136 | 295 | 168 | 11 | 52 | 307 | 34 | 323 | 3.02e-12 | 66.6 |
| Msa0568170 | MtrunA17_Chr7g0240341 | 28.729 | 181 | 107 | 4 | 49 | 207 | 131 | 311 | 1.88e-12 | 67.0 |
| Msa0568170 | MtrunA17_Chr7g0240341 | 28.966 | 145 | 97 | 2 | 172 | 310 | 76 | 220 | 3.00e-12 | 66.6 |
| Msa0568170 | MtrunA17_Chr3g0115801 | 26.804 | 194 | 136 | 4 | 132 | 323 | 115 | 304 | 4.02e-12 | 66.6 |
| Msa0568170 | MtrunA17_Chr1g0196921 | 22.603 | 292 | 166 | 7 | 58 | 304 | 20 | 296 | 1.86e-11 | 63.9 |
| Msa0568170 | MtrunA17_Chr5g0436571 | 24.919 | 309 | 164 | 10 | 67 | 310 | 23 | 328 | 7.69e-11 | 62.4 |
| Msa0568170 | MtrunA17_Chr8g0378951 | 24.549 | 277 | 156 | 10 | 53 | 287 | 22 | 287 | 8.81e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0568170 | AT4G39460.2 | 78.481 | 316 | 62 | 2 | 1 | 310 | 1 | 316 | 1.07e-176 | 492 |
| Msa0568170 | AT4G39460.1 | 78.481 | 316 | 62 | 2 | 1 | 310 | 1 | 316 | 1.07e-176 | 492 |
| Msa0568170 | AT4G39460.3 | 78.481 | 316 | 62 | 2 | 1 | 310 | 1 | 316 | 1.07e-176 | 492 |
| Msa0568170 | AT1G34065.1 | 72.857 | 280 | 76 | 0 | 29 | 308 | 59 | 338 | 2.26e-153 | 434 |
| Msa0568170 | AT1G34065.2 | 72.857 | 280 | 76 | 0 | 29 | 308 | 52 | 331 | 8.52e-153 | 432 |
| Msa0568170 | AT4G11440.1 | 33.333 | 276 | 158 | 5 | 54 | 306 | 332 | 604 | 1.95e-40 | 150 |
| Msa0568170 | AT4G11440.2 | 33.333 | 276 | 158 | 5 | 54 | 306 | 332 | 604 | 1.95e-40 | 150 |
| Msa0568170 | AT1G74240.1 | 35.231 | 281 | 135 | 5 | 53 | 286 | 37 | 317 | 2.26e-39 | 142 |
| Msa0568170 | AT1G74240.2 | 35.075 | 268 | 127 | 5 | 66 | 286 | 2 | 269 | 5.46e-37 | 135 |
| Msa0568170 | AT5G42130.1 | 33.077 | 260 | 150 | 5 | 66 | 302 | 132 | 390 | 4.97e-35 | 132 |
| Msa0568170 | AT2G26360.1 | 29.841 | 315 | 183 | 5 | 16 | 293 | 51 | 364 | 2.17e-33 | 127 |
| Msa0568170 | AT1G07030.1 | 31.930 | 285 | 167 | 7 | 48 | 307 | 36 | 318 | 2.59e-33 | 125 |
| Msa0568170 | AT1G07030.1 | 30.366 | 191 | 124 | 4 | 125 | 310 | 32 | 218 | 1.45e-16 | 79.7 |
| Msa0568170 | AT2G30160.1 | 32.292 | 288 | 165 | 8 | 48 | 307 | 38 | 323 | 3.68e-32 | 122 |
| Msa0568170 | AT2G30160.1 | 30.055 | 183 | 119 | 4 | 133 | 310 | 42 | 220 | 1.68e-14 | 73.6 |
| Msa0568170 | AT2G35800.1 | 29.658 | 263 | 176 | 2 | 49 | 303 | 542 | 803 | 1.42e-31 | 125 |
| Msa0568170 | AT3G54110.1 | 29.617 | 287 | 157 | 8 | 58 | 307 | 21 | 299 | 1.83e-24 | 101 |
| Msa0568170 | AT4G32400.1 | 28.623 | 276 | 179 | 6 | 52 | 309 | 114 | 389 | 2.97e-24 | 102 |
| Msa0568170 | AT3G20240.1 | 27.148 | 291 | 170 | 8 | 53 | 305 | 53 | 339 | 2.27e-23 | 99.0 |
| Msa0568170 | AT5G58970.1 | 27.891 | 294 | 176 | 6 | 47 | 307 | 11 | 301 | 8.21e-21 | 91.3 |
| Msa0568170 | AT5G26200.1 | 26.280 | 293 | 171 | 6 | 62 | 309 | 49 | 341 | 1.02e-20 | 91.7 |
| Msa0568170 | AT5G15640.1 | 28.254 | 315 | 183 | 10 | 30 | 306 | 11 | 320 | 2.62e-20 | 90.1 |
| Msa0568170 | AT1G79900.1 | 28.571 | 266 | 168 | 8 | 67 | 314 | 31 | 292 | 3.64e-20 | 89.4 |
| Msa0568170 | AT4G01100.1 | 26.101 | 318 | 186 | 7 | 37 | 305 | 27 | 344 | 5.21e-20 | 89.7 |
| Msa0568170 | AT4G01100.1 | 30.412 | 194 | 117 | 5 | 133 | 310 | 42 | 233 | 9.91e-17 | 80.5 |
| Msa0568170 | AT5G15640.2 | 27.915 | 283 | 166 | 7 | 62 | 306 | 31 | 313 | 1.88e-19 | 87.8 |
| Msa0568170 | AT4G03115.1 | 28.409 | 264 | 162 | 6 | 40 | 279 | 23 | 283 | 2.28e-19 | 87.4 |
| Msa0568170 | AT4G03115.3 | 28.409 | 264 | 162 | 6 | 40 | 279 | 55 | 315 | 2.54e-19 | 87.8 |
| Msa0568170 | AT2G47490.1 | 28.169 | 284 | 166 | 8 | 64 | 313 | 29 | 308 | 8.61e-19 | 85.9 |
| Msa0568170 | AT2G37890.1 | 27.184 | 309 | 188 | 10 | 32 | 305 | 26 | 332 | 1.86e-17 | 82.4 |
| Msa0568170 | AT2G37890.1 | 30.348 | 201 | 124 | 4 | 127 | 311 | 39 | 239 | 3.89e-15 | 75.5 |
| Msa0568170 | AT5G09470.1 | 26.638 | 229 | 157 | 3 | 89 | 307 | 107 | 334 | 3.79e-17 | 81.3 |
| Msa0568170 | AT4G01100.2 | 25.000 | 332 | 186 | 8 | 37 | 305 | 27 | 358 | 5.19e-17 | 81.3 |
| Msa0568170 | AT4G01100.2 | 27.670 | 206 | 121 | 4 | 133 | 310 | 42 | 247 | 1.68e-14 | 73.9 |
| Msa0568170 | AT4G01100.3 | 26.877 | 253 | 151 | 5 | 87 | 305 | 42 | 294 | 6.48e-17 | 80.1 |
| Msa0568170 | AT4G01100.3 | 31.677 | 161 | 97 | 4 | 161 | 310 | 25 | 183 | 4.95e-16 | 77.8 |
| Msa0568170 | AT4G01100.3 | 28.205 | 195 | 99 | 5 | 54 | 207 | 97 | 291 | 4.55e-13 | 69.3 |
| Msa0568170 | AT5G66380.1 | 28.638 | 213 | 131 | 5 | 130 | 326 | 7 | 214 | 7.64e-17 | 80.1 |
| Msa0568170 | AT5G66380.1 | 27.063 | 303 | 181 | 8 | 49 | 313 | 7 | 307 | 1.77e-15 | 76.3 |
| Msa0568170 | AT5G51050.1 | 29.286 | 280 | 163 | 8 | 53 | 305 | 224 | 495 | 9.77e-17 | 81.3 |
| Msa0568170 | AT5G51050.1 | 30.114 | 176 | 102 | 6 | 52 | 207 | 318 | 492 | 9.94e-13 | 68.9 |
| Msa0568170 | AT1G72820.1 | 26.159 | 302 | 169 | 8 | 62 | 309 | 41 | 342 | 1.18e-16 | 80.1 |
| Msa0568170 | AT1G72820.2 | 26.159 | 302 | 169 | 8 | 62 | 309 | 41 | 342 | 1.18e-16 | 80.1 |
| Msa0568170 | AT4G03115.5 | 29.442 | 197 | 131 | 4 | 88 | 279 | 19 | 212 | 1.45e-16 | 78.2 |
| Msa0568170 | AT4G03115.6 | 29.442 | 197 | 131 | 4 | 88 | 279 | 27 | 220 | 1.76e-16 | 78.2 |
| Msa0568170 | AT1G25380.1 | 28.369 | 282 | 164 | 8 | 64 | 310 | 33 | 311 | 2.53e-16 | 79.3 |
| Msa0568170 | AT1G25380.2 | 28.369 | 282 | 164 | 8 | 64 | 310 | 33 | 311 | 2.53e-16 | 79.3 |
| Msa0568170 | AT5G01340.1 | 28.269 | 283 | 160 | 9 | 53 | 299 | 18 | 293 | 2.65e-15 | 75.9 |
| Msa0568170 | AT2G33820.1 | 26.909 | 275 | 162 | 7 | 48 | 285 | 14 | 286 | 4.31e-15 | 75.1 |
| Msa0568170 | AT4G26180.1 | 24.026 | 308 | 193 | 6 | 37 | 305 | 4 | 309 | 1.71e-14 | 73.6 |
| Msa0568170 | AT4G26180.1 | 28.293 | 205 | 127 | 7 | 133 | 318 | 22 | 225 | 4.47e-13 | 69.3 |
| Msa0568170 | AT5G61810.2 | 28.000 | 275 | 172 | 7 | 52 | 306 | 65 | 333 | 2.67e-14 | 73.2 |
| Msa0568170 | AT4G26180.2 | 24.028 | 283 | 174 | 6 | 37 | 280 | 4 | 284 | 2.85e-14 | 72.4 |
| Msa0568170 | AT4G26180.2 | 28.293 | 205 | 127 | 7 | 133 | 318 | 22 | 225 | 2.91e-13 | 69.7 |
| Msa0568170 | AT3G55640.2 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 2.87e-14 | 72.0 |
| Msa0568170 | AT3G55640.3 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 2.87e-14 | 72.0 |
| Msa0568170 | AT5G61810.1 | 28.623 | 276 | 169 | 8 | 52 | 306 | 208 | 476 | 3.00e-14 | 73.6 |
| Msa0568170 | AT2G33820.3 | 26.502 | 283 | 161 | 8 | 48 | 285 | 14 | 294 | 3.44e-14 | 72.8 |
| Msa0568170 | AT3G53940.1 | 26.102 | 295 | 176 | 10 | 50 | 306 | 71 | 361 | 3.88e-14 | 72.8 |
| Msa0568170 | AT3G53940.1 | 29.897 | 194 | 113 | 5 | 139 | 311 | 76 | 267 | 3.83e-13 | 69.7 |
| Msa0568170 | AT3G51870.1 | 25.103 | 243 | 171 | 7 | 87 | 325 | 146 | 381 | 4.35e-14 | 72.8 |
| Msa0568170 | AT3G51870.1 | 28.889 | 180 | 98 | 7 | 146 | 307 | 104 | 271 | 1.34e-11 | 65.5 |
| Msa0568170 | AT5G01500.1 | 27.027 | 222 | 154 | 5 | 87 | 306 | 174 | 389 | 6.86e-14 | 72.4 |
| Msa0568170 | AT5G01500.1 | 30.726 | 179 | 98 | 7 | 146 | 308 | 132 | 300 | 2.36e-11 | 64.7 |
| Msa0568170 | AT3G55640.1 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 1.13e-13 | 71.2 |
| Msa0568170 | AT3G55640.1 | 28.962 | 183 | 108 | 3 | 48 | 208 | 141 | 323 | 4.49e-12 | 66.6 |
| Msa0568170 | AT3G55640.4 | 30.137 | 146 | 95 | 3 | 172 | 310 | 86 | 231 | 1.13e-13 | 71.2 |
| Msa0568170 | AT3G55640.4 | 28.962 | 183 | 108 | 3 | 48 | 208 | 141 | 323 | 4.49e-12 | 66.6 |
| Msa0568170 | AT3G53940.2 | 29.798 | 198 | 116 | 5 | 139 | 315 | 76 | 271 | 1.26e-13 | 70.5 |
| Msa0568170 | AT5G46800.2 | 28.674 | 279 | 155 | 10 | 43 | 282 | 3 | 276 | 1.60e-13 | 70.5 |
| Msa0568170 | AT5G46800.2 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.20e-12 | 67.0 |
| Msa0568170 | AT5G46800.3 | 28.674 | 279 | 155 | 10 | 43 | 282 | 3 | 276 | 1.60e-13 | 70.5 |
| Msa0568170 | AT5G46800.3 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.20e-12 | 67.0 |
| Msa0568170 | AT5G46800.1 | 28.674 | 279 | 155 | 10 | 43 | 282 | 3 | 276 | 1.60e-13 | 70.5 |
| Msa0568170 | AT5G46800.1 | 29.048 | 210 | 127 | 4 | 129 | 316 | 4 | 213 | 2.20e-12 | 67.0 |
| Msa0568170 | AT1G14140.1 | 25.436 | 287 | 180 | 7 | 52 | 306 | 16 | 300 | 3.90e-13 | 69.3 |
| Msa0568170 | AT5G07320.1 | 27.239 | 268 | 167 | 6 | 60 | 306 | 217 | 477 | 7.07e-13 | 69.7 |
| Msa0568170 | AT5G07320.1 | 29.143 | 175 | 104 | 5 | 52 | 207 | 300 | 473 | 2.27e-12 | 68.2 |
| Msa0568170 | AT4G24570.1 | 25.991 | 227 | 158 | 2 | 90 | 307 | 87 | 312 | 1.36e-12 | 67.8 |
| Msa0568170 | AT3G21390.2 | 25.246 | 305 | 168 | 10 | 54 | 299 | 43 | 346 | 1.95e-12 | 67.8 |
| Msa0568170 | AT3G21390.1 | 25.246 | 305 | 168 | 10 | 54 | 299 | 21 | 324 | 2.02e-12 | 67.4 |
| Msa0568170 | AT2G33820.4 | 28.959 | 221 | 122 | 7 | 48 | 237 | 14 | 230 | 5.42e-12 | 65.5 |
| Msa0568170 | AT1G14560.3 | 27.700 | 213 | 106 | 8 | 52 | 221 | 25 | 232 | 1.03e-11 | 64.3 |
| Msa0568170 | AT1G14560.1 | 23.469 | 294 | 169 | 9 | 60 | 305 | 35 | 320 | 3.46e-11 | 63.9 |
| Msa0568170 | AT5G64970.3 | 28.079 | 203 | 137 | 5 | 106 | 302 | 106 | 305 | 7.51e-11 | 63.2 |
Find 85 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAGCAATTTCTGCTTTGC+AGG | 0.223057 | 4_1:-69770429 | None:intergenic |
| TTATTGAAAGGCCTTTATTC+TGG | 0.225181 | 4_1:+69769411 | Msa0568170:CDS |
| GATCCAGAAAATGCAATTAT+TGG | 0.242454 | 4_1:+69771583 | Msa0568170:CDS |
| GCATCTAGGGAGGGCTTTAA+AGG | 0.249580 | 4_1:+69770976 | Msa0568170:CDS |
| ATTCCCTTGTATTGGTTTGC+AGG | 0.276596 | 4_1:-69772445 | None:intergenic |
| TATATTTATTGCAGGGTATT+GGG | 0.281623 | 4_1:+69772677 | Msa0568170:intron |
| AAGATTAAGAATATGATTCT+TGG | 0.288865 | 4_1:+69772830 | Msa0568170:exon |
| TTGTGTTCAAACCATTATTA+AGG | 0.295101 | 4_1:+69772474 | Msa0568170:CDS |
| CTGCAGCACTGAGCTAGTTT+AGG | 0.298289 | 4_1:-69772790 | None:intergenic |
| TTATATTTATTGCAGGGTAT+TGG | 0.325821 | 4_1:+69772676 | Msa0568170:intron |
| ATAGGTGGTTCAATATTCTT+TGG | 0.340105 | 4_1:+69772721 | Msa0568170:CDS |
| CCGAATACTACAAAACTAGA+TGG | 0.342327 | 4_1:-69772923 | None:intergenic |
| CTCTATGAGCAGATTCGTTT+AGG | 0.342765 | 4_1:+69771172 | Msa0568170:CDS |
| GGATTGGCAGGGAACCTTGC+TGG | 0.346162 | 4_1:+69769432 | Msa0568170:CDS |
| GTCAAGCAACGAATGCAAAC+TGG | 0.350543 | 4_1:+69770916 | Msa0568170:CDS |
| TGGGCCCTCTTCCTTAATAA+TGG | 0.357096 | 4_1:-69772485 | None:intergenic |
| TAGCTTCAAAATCTAGGTCT+TGG | 0.362663 | 4_1:+69772968 | Msa0568170:three_prime_UTR |
| GGCCTTTATTCTGGATTGGC+AGG | 0.363354 | 4_1:+69769420 | Msa0568170:CDS |
| TCCCTGCCAATCCAGAATAA+AGG | 0.367538 | 4_1:-69769422 | None:intergenic |
| AGGGCATCTGCTTTATTTGT+TGG | 0.371448 | 4_1:+69770396 | Msa0568170:intron |
| AATCTACAATTCCCTTGTAT+TGG | 0.374693 | 4_1:-69772453 | None:intergenic |
| TGTCATCAAGACAAGGTTAA+TGG | 0.406251 | 4_1:+69772285 | Msa0568170:CDS |
| ATGTATGTATTCTGCGGAAA+CGG | 0.419064 | 4_1:-69767444 | None:intergenic |
| TCAAACCATTATTAAGGAAG+AGG | 0.421702 | 4_1:+69772480 | Msa0568170:CDS |
| TATTCTTAGCTTCAAAATCT+AGG | 0.423179 | 4_1:+69772962 | Msa0568170:three_prime_UTR |
| TTTCTTGTAGGCGCACTAAC+CGG | 0.426214 | 4_1:+69772241 | Msa0568170:intron |
| CTGTTCGCTTTATTGCATCT+AGG | 0.427767 | 4_1:+69770962 | Msa0568170:CDS |
| CGCTTTATTGCATCTAGGGA+GGG | 0.439283 | 4_1:+69770967 | Msa0568170:CDS |
| ATGCCTATCCAAAGCACTCT+TGG | 0.455630 | 4_1:-69772700 | None:intergenic |
| TTTAAACTTCCTTAGACTGC+AGG | 0.461102 | 4_1:+69770755 | Msa0568170:intron |
| AGATGCAGCAATGCCTCCTA+TGG | 0.462674 | 4_1:-69770780 | None:intergenic |
| CCTTAGACTGCAGGTGCCAT+AGG | 0.468200 | 4_1:+69770764 | Msa0568170:intron |
| GAGAATTAAGCTACCTCTGT+TGG | 0.470712 | 4_1:-69770815 | None:intergenic |
| TCCTCTTACACTCTCCGTTA+CGG | 0.470847 | 4_1:+69767494 | Msa0568170:CDS |
| TGTTCGCTTTATTGCATCTA+GGG | 0.478843 | 4_1:+69770963 | Msa0568170:CDS |
| GAAAGGCCTTTATTCTGGAT+TGG | 0.486028 | 4_1:+69769416 | Msa0568170:CDS |
| GTATTGGGCCAAGAGTGCTT+TGG | 0.489705 | 4_1:+69772692 | Msa0568170:CDS |
| CAAGACAAGGTTAATGGTCC+AGG | 0.493486 | 4_1:+69772291 | Msa0568170:CDS |
| TATTTCCAATCACAGGGGTA+TGG | 0.494820 | 4_1:+69771103 | Msa0568170:intron |
| AAAGTGCGTAAGAAGTCAAA+TGG | 0.506329 | 4_1:-69768244 | None:intergenic |
| TGTATGTATTCTGCGGAAAC+GGG | 0.509208 | 4_1:-69767443 | None:intergenic |
| ATTATTAAGGAAGAGGGCCC+AGG | 0.516548 | 4_1:+69772487 | Msa0568170:CDS |
| AAGTGGTGTGGTTATAGCTC+CGG | 0.518252 | 4_1:-69772260 | None:intergenic |
| GTTATCGCAGGAGGTACAGC+TGG | 0.521468 | 4_1:+69768874 | Msa0568170:CDS |
| TGTACAATGTATTACCCCTC+TGG | 0.532453 | 4_1:+69772882 | Msa0568170:three_prime_UTR |
| TCAAAATCTAGGTCTTGGAT+TGG | 0.533368 | 4_1:+69772973 | Msa0568170:three_prime_UTR |
| CAAACCATTATTAAGGAAGA+GGG | 0.542176 | 4_1:+69772481 | Msa0568170:CDS |
| GGGCCAAGAGTGCTTTGGAT+AGG | 0.546598 | 4_1:+69772697 | Msa0568170:CDS |
| CGAATACTACAAAACTAGAT+GGG | 0.558824 | 4_1:-69772922 | None:intergenic |
| TATGCAGAGGGTGTTATCGC+AGG | 0.559305 | 4_1:+69768862 | Msa0568170:intron |
| TCAAGCAACGAATGCAAACT+GGG | 0.559945 | 4_1:+69770917 | Msa0568170:CDS |
| GGGACCTGCAAACCAATACA+AGG | 0.561092 | 4_1:+69772441 | Msa0568170:intron |
| ACGGTGCAAGATTCTGCCTC+CGG | 0.561209 | 4_1:+69767513 | Msa0568170:CDS |
| TCGTTTAGGTTATATGCTTG+CGG | 0.564520 | 4_1:+69771186 | Msa0568170:CDS |
| GCAAAACTGAATAGCATCGA+AGG | 0.569103 | 4_1:-69771149 | None:intergenic |
| GGCAGAATCTTGCACCGTAA+CGG | 0.574358 | 4_1:-69767508 | None:intergenic |
| TCGCTTTATTGCATCTAGGG+AGG | 0.574800 | 4_1:+69770966 | Msa0568170:CDS |
| GGAGAAACACTATTATTGAA+AGG | 0.579166 | 4_1:+69769399 | Msa0568170:CDS |
| TAGACTGCAGGTGCCATAGG+AGG | 0.585629 | 4_1:+69770767 | Msa0568170:intron |
| GCCTTTATTCTGGATTGGCA+GGG | 0.591598 | 4_1:+69769421 | Msa0568170:CDS |
| TTTAGGTGTAGGACGCCTCT+CGG | 0.591628 | 4_1:-69772773 | None:intergenic |
| GAGCCATCACTGAACAAAAG+AGG | 0.599207 | 4_1:-69767473 | None:intergenic |
| GTGTAGGACGCCTCTCGGCA+AGG | 0.600855 | 4_1:-69772768 | None:intergenic |
| AGAGTGCTTTGGATAGGCAT+AGG | 0.606452 | 4_1:+69772703 | Msa0568170:CDS |
| CTGCAAAGCAGAAATTGCTA+AGG | 0.608222 | 4_1:+69770430 | Msa0568170:CDS |
| ACCGTAACGGAGAGTGTAAG+AGG | 0.610387 | 4_1:-69767495 | None:intergenic |
| CTAAACGAATCTGCTCATAG+AGG | 0.612392 | 4_1:-69771171 | None:intergenic |
| TACATTTCGAATTAACCAGA+GGG | 0.615797 | 4_1:-69772897 | None:intergenic |
| GCGAACAGCATTAGAAGCTG+AGG | 0.620160 | 4_1:-69770947 | None:intergenic |
| CACTTGATGTCATCAAGACA+AGG | 0.621719 | 4_1:+69772278 | Msa0568170:CDS |
| GAGGGGTAATACATTGTACA+CGG | 0.631402 | 4_1:-69772879 | None:intergenic |
| CACTGAGCTAGTTTAGGTGT+AGG | 0.633466 | 4_1:-69772784 | None:intergenic |
| CATACCTTCAGAAAAGCACC+TGG | 0.639866 | 4_1:-69772505 | None:intergenic |
| CAAAACTGAATAGCATCGAA+GGG | 0.640886 | 4_1:-69771148 | None:intergenic |
| GTGCTTTGGATAGGCATAGG+TGG | 0.648337 | 4_1:+69772706 | Msa0568170:CDS |
| CTTGATGACATCAAGTGGTG+TGG | 0.653456 | 4_1:-69772272 | None:intergenic |
| CAAAACGTTTCCTTGCCGAG+AGG | 0.661791 | 4_1:+69772758 | Msa0568170:CDS |
| CTTGTCTTGATGACATCAAG+TGG | 0.662260 | 4_1:-69772277 | None:intergenic |
| GCAGAGGGTGTTATCGCAGG+AGG | 0.664121 | 4_1:+69768865 | Msa0568170:intron |
| ATACATTTCGAATTAACCAG+AGG | 0.673284 | 4_1:-69772898 | None:intergenic |
| AGGGGTAATACATTGTACAC+GGG | 0.699598 | 4_1:-69772878 | None:intergenic |
| GGACCTGCAAACCAATACAA+GGG | 0.705803 | 4_1:+69772442 | Msa0568170:CDS |
| CTCACGGTAAGACACCAGCA+AGG | 0.720656 | 4_1:-69769446 | None:intergenic |
| ATACCTTCAGAAAAGCACCT+GGG | 0.748450 | 4_1:-69772504 | None:intergenic |
| ACATTTCGAATTAACCAGAG+GGG | 0.749171 | 4_1:-69772896 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATTTATGCATAAAAT+TGG | - | chr4_1:69768019-69768038 | None:intergenic | 10.0% |
| !!! | TTTTAAAATTGATATTTCTA+TGG | + | chr4_1:69770842-69770861 | Msa0568170:intron | 10.0% |
| !!! | TTCTATTTTTATGTATTTTA+AGG | + | chr4_1:69771222-69771241 | Msa0568170:intron | 10.0% |
| !! | TTATACTATCTAATCTATAT+GGG | - | chr4_1:69767881-69767900 | None:intergenic | 15.0% |
| !! | TTTATACTATCTAATCTATA+TGG | - | chr4_1:69767882-69767901 | None:intergenic | 15.0% |
| !! | AAATAAAATACACATATGAA+GGG | - | chr4_1:69768473-69768492 | None:intergenic | 15.0% |
| !! | AAAATAAAATACACATATGA+AGG | - | chr4_1:69768474-69768493 | None:intergenic | 15.0% |
| !!! | GAAAATAAACCTATATTTTT+TGG | + | chr4_1:69769109-69769128 | Msa0568170:intron | 15.0% |
| !!! | ATATTTGTTGATATTGATAT+AGG | + | chr4_1:69769594-69769613 | Msa0568170:intron | 15.0% |
| !!! | AACACCAATTATTAAATTTT+TGG | + | chr4_1:69770148-69770167 | Msa0568170:intron | 15.0% |
| !!! | TCCTTATATTAAATTTTGTT+TGG | + | chr4_1:69770177-69770196 | Msa0568170:intron | 15.0% |
| !! | TCCAAACAAAATTTAATATA+AGG | - | chr4_1:69770181-69770200 | None:intergenic | 15.0% |
| !! | TATTTCACAAATTATTTAAG+CGG | + | chr4_1:69770280-69770299 | Msa0568170:intron | 15.0% |
| !!! | AAAATGCTTTAGAATTTTTA+TGG | + | chr4_1:69770710-69770729 | Msa0568170:intron | 15.0% |
| !!! | AAATGCTTTAGAATTTTTAT+GGG | + | chr4_1:69770711-69770730 | Msa0568170:intron | 15.0% |
| !!! | ATTTTGTTTAAATGTTTCTT+TGG | + | chr4_1:69771074-69771093 | Msa0568170:intron | 15.0% |
| !! | TCTTTAAACATTAATTCATA+AGG | - | chr4_1:69771720-69771739 | None:intergenic | 15.0% |
| !!! | TTTAATTAAGATCTAGAATT+AGG | - | chr4_1:69771880-69771899 | None:intergenic | 15.0% |
| !! | CAAAAAATTACAAATAGAAA+TGG | - | chr4_1:69772083-69772102 | None:intergenic | 15.0% |
| !!! | TTTCTATTTGTAATTTTTTG+TGG | + | chr4_1:69772083-69772102 | Msa0568170:intron | 15.0% |
| !!! | AAATGATCATTTCTTTATTT+TGG | + | chr4_1:69772150-69772169 | Msa0568170:intron | 15.0% |
| !! | ATATTCTTATATTTATTGCA+GGG | + | chr4_1:69772670-69772689 | Msa0568170:intron | 15.0% |
| !!! | CATCATTTTAACAGATTATA+TGG | + | chr4_1:69768139-69768158 | Msa0568170:intron | 20.0% |
| !!! | TATTTTATTTTTCGACTGTA+AGG | + | chr4_1:69768483-69768502 | Msa0568170:intron | 20.0% |
| !! | GATATTTAAACACAATCTAA+GGG | - | chr4_1:69768769-69768788 | None:intergenic | 20.0% |
| !! | TGATATTTAAACACAATCTA+AGG | - | chr4_1:69768770-69768789 | None:intergenic | 20.0% |
| !! | ACAAATTATAATGACTATTG+AGG | + | chr4_1:69768970-69768989 | Msa0568170:intron | 20.0% |
| !! | CAAATTATAATGACTATTGA+GGG | + | chr4_1:69768971-69768990 | Msa0568170:intron | 20.0% |
| !!! | ACAATAGCAATTTTTTTTGT+TGG | + | chr4_1:69769152-69769171 | Msa0568170:intron | 20.0% |
| !!! | TTAAGTTTTTGATATTTCCA+TGG | + | chr4_1:69769285-69769304 | Msa0568170:intron | 20.0% |
| !!! | TCTAAATTGCTATTAAGAAA+AGG | - | chr4_1:69769311-69769330 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATAGCAATTTAG+AGG | + | chr4_1:69769310-69769329 | Msa0568170:intron | 20.0% |
| !!! | ATGTTTGTTTTTGTTTTGTT+AGG | + | chr4_1:69769365-69769384 | Msa0568170:intron | 20.0% |
| !!! | TAAAGCATGAACTATTTTAT+GGG | - | chr4_1:69769755-69769774 | None:intergenic | 20.0% |
| !!! | TTAAAGCATGAACTATTTTA+TGG | - | chr4_1:69769756-69769775 | None:intergenic | 20.0% |
| !! | CAAAATTTAATATAAGGAGA+GGG | - | chr4_1:69770175-69770194 | None:intergenic | 20.0% |
| !! | ACAAAATTTAATATAAGGAG+AGG | - | chr4_1:69770176-69770195 | None:intergenic | 20.0% |
| !! | TTGATTCATGAATCATATAT+AGG | + | chr4_1:69770336-69770355 | Msa0568170:intron | 20.0% |
| !! | GTTACTACTTATGTTTATAT+AGG | - | chr4_1:69770503-69770522 | None:intergenic | 20.0% |
| !! | AAATATCAAAAGAAAGAGAT+GGG | - | chr4_1:69771023-69771042 | None:intergenic | 20.0% |
| !! | AAAATATCAAAAGAAAGAGA+TGG | - | chr4_1:69771024-69771043 | None:intergenic | 20.0% |
| !! | ACATTTAAACAAAATATCAC+AGG | - | chr4_1:69771069-69771088 | None:intergenic | 20.0% |
| !! | AATTAATGTTTAAAGATGTG+TGG | + | chr4_1:69771724-69771743 | Msa0568170:intron | 20.0% |
| !! | TAGCAAATATATCTTCATTT+AGG | - | chr4_1:69772041-69772060 | None:intergenic | 20.0% |
| !!! | TATTTGTAATTTTTTGTGGA+TGG | + | chr4_1:69772087-69772106 | Msa0568170:intron | 20.0% |
| !! | CATATTCTTATATTTATTGC+AGG | + | chr4_1:69772669-69772688 | Msa0568170:intron | 20.0% |
| !! | AAGATTAAGAATATGATTCT+TGG | + | chr4_1:69772830-69772849 | Msa0568170:exon | 20.0% |
| !! | TTTTGAATGTATGTATTCTG+CGG | - | chr4_1:69767453-69767472 | None:intergenic | 25.0% |
| !!! | TAACTTTTGTTATAAGCAGT+AGG | - | chr4_1:69767657-69767676 | None:intergenic | 25.0% |
| ! | ATTAATTCTCTCGTGAATAT+AGG | - | chr4_1:69767815-69767834 | None:intergenic | 25.0% |
| ! | AGAATTAATCTCAATAGTGT+TGG | + | chr4_1:69767826-69767845 | Msa0568170:intron | 25.0% |
| ! | GAATTAATCTCAATAGTGTT+GGG | + | chr4_1:69767827-69767846 | Msa0568170:intron | 25.0% |
| ! | GCACAATATAAAAACCTAAT+AGG | + | chr4_1:69767969-69767988 | Msa0568170:intron | 25.0% |
| !! | TTCTATTCTTTTAATGACTG+AGG | + | chr4_1:69768570-69768589 | Msa0568170:intron | 25.0% |
| !!! | TATTATGGTTACCCTTTTTT+AGG | + | chr4_1:69768597-69768616 | Msa0568170:intron | 25.0% |
| !!! | AGCAATTTTTTTTGTTGGAT+AGG | + | chr4_1:69769157-69769176 | Msa0568170:intron | 25.0% |
| ! | ACATATTAAATCTTGACGAT+TGG | - | chr4_1:69769214-69769233 | None:intergenic | 25.0% |
| !! | AGTTGATTTACATAGTATAG+TGG | + | chr4_1:69769245-69769264 | Msa0568170:intron | 25.0% |
| !!! | CTCCCATTTTTTTACATAAA+AGG | + | chr4_1:69769334-69769353 | Msa0568170:intron | 25.0% |
| !! | CGCCTTTTATGTAAAAAAAT+GGG | - | chr4_1:69769339-69769358 | None:intergenic | 25.0% |
| ! | TTGATACTTCTTACAATCTA+TGG | + | chr4_1:69770050-69770069 | Msa0568170:intron | 25.0% |
| !! | ATGTTCTGATTTTACAAAAG+AGG | + | chr4_1:69770110-69770129 | Msa0568170:intron | 25.0% |
| !! | TGTTCTGATTTTACAAAAGA+GGG | + | chr4_1:69770111-69770130 | Msa0568170:intron | 25.0% |
| ! | GGGTCCAAAAATTTAATAAT+TGG | - | chr4_1:69770155-69770174 | None:intergenic | 25.0% |
| !!! | TGTATTACTTTTAAATGTGC+AGG | + | chr4_1:69770376-69770395 | Msa0568170:intron | 25.0% |
| !!! | GTATTACTTTTAAATGTGCA+GGG | + | chr4_1:69770377-69770396 | Msa0568170:intron | 25.0% |
| ! | AATATCAAAAGAAAGAGATG+GGG | - | chr4_1:69771022-69771041 | None:intergenic | 25.0% |
| ! | TATTGATATTTCCAATCACA+GGG | + | chr4_1:69771097-69771116 | Msa0568170:intron | 25.0% |
| ! | TTTAAGGACTTGATTTCATT+TGG | + | chr4_1:69771238-69771257 | Msa0568170:intron | 25.0% |
| !! | TGATATTTTGTTGCTAAGAA+TGG | + | chr4_1:69771290-69771309 | Msa0568170:intron | 25.0% |
| ! | AAGAATTCATATCAACATGT+AGG | + | chr4_1:69771445-69771464 | Msa0568170:intron | 25.0% |
| !! | GATTTGTATTTCTTTTTGCT+AGG | + | chr4_1:69771543-69771562 | Msa0568170:intron | 25.0% |
| ! | AGGTGAATAAATGACATTAT+AGG | + | chr4_1:69771615-69771634 | Msa0568170:intron | 25.0% |
| !!! | TAAGATTCAAGGTTTTGATT+CGG | - | chr4_1:69771776-69771795 | None:intergenic | 25.0% |
| ! | TCAAGCTATATTTCTTTACA+AGG | + | chr4_1:69771801-69771820 | Msa0568170:intron | 25.0% |
| ! | TAAACAATGAAGAAATCAGT+AGG | + | chr4_1:69771896-69771915 | Msa0568170:intron | 25.0% |
| !!! | AAATAGGTTTTTCGGTAATT+AGG | + | chr4_1:69772115-69772134 | Msa0568170:intron | 25.0% |
| !!! | TATACCATTTTGTTTCTTGT+AGG | + | chr4_1:69772229-69772248 | Msa0568170:intron | 25.0% |
| ! | TTGTGTTCAAACCATTATTA+AGG | + | chr4_1:69772474-69772493 | Msa0568170:CDS | 25.0% |
| ! | AAAATATATTTCTTGCCATG+TGG | - | chr4_1:69772630-69772649 | None:intergenic | 25.0% |
| !! | ACATGGCAAGAAATATATTT+TGG | + | chr4_1:69772629-69772648 | Msa0568170:intron | 25.0% |
| ! | TTATATTTATTGCAGGGTAT+TGG | + | chr4_1:69772676-69772695 | Msa0568170:intron | 25.0% |
| !! | TATATTTATTGCAGGGTATT+GGG | + | chr4_1:69772677-69772696 | Msa0568170:intron | 25.0% |
| !!! | GAATATGATTCTTGGTTTTA+TGG | + | chr4_1:69772838-69772857 | Msa0568170:three_prime_UTR | 25.0% |
| ! | TATTCTTAGCTTCAAAATCT+AGG | + | chr4_1:69772962-69772981 | Msa0568170:three_prime_UTR | 25.0% |
| TAAGTTGTTTATCGAAACAG+AGG | - | chr4_1:69767615-69767634 | None:intergenic | 30.0% | |
| TCGAAAAATAGCTTATTGCT+GGG | - | chr4_1:69767688-69767707 | None:intergenic | 30.0% | |
| ATCGAAAAATAGCTTATTGC+TGG | - | chr4_1:69767689-69767708 | None:intergenic | 30.0% | |
| TATCTAATCTATATGGGACT+TGG | - | chr4_1:69767875-69767894 | None:intergenic | 30.0% | |
| ! | GATTTGCTCTTATTCCTATT+AGG | - | chr4_1:69767986-69768005 | None:intergenic | 30.0% |
| AATGACTGAGGACATTATTA+TGG | + | chr4_1:69768582-69768601 | Msa0568170:intron | 30.0% | |
| ATAAAGAAAGCAACCATTTG+AGG | - | chr4_1:69768623-69768642 | None:intergenic | 30.0% | |
| ! | TCAAATGGTTGCTTTCTTTA+TGG | + | chr4_1:69768622-69768641 | Msa0568170:intron | 30.0% |
| TTCACTGCATATATGAATGA+GGG | - | chr4_1:69768731-69768750 | None:intergenic | 30.0% | |
| TCATATATGCAGTGAAGAAT+TGG | + | chr4_1:69768735-69768754 | Msa0568170:intron | 30.0% | |
| !! | GTGTTTTTATAGTGTCAATG+GGG | - | chr4_1:69768924-69768943 | None:intergenic | 30.0% |
| !! | CGTGTTTTTATAGTGTCAAT+GGG | - | chr4_1:69768925-69768944 | None:intergenic | 30.0% |
| !! | ACGTGTTTTTATAGTGTCAA+TGG | - | chr4_1:69768926-69768945 | None:intergenic | 30.0% |
| GTAATAAGTAATAGCCAATG+TGG | + | chr4_1:69769035-69769054 | Msa0568170:intron | 30.0% | |
| CTCGTCTTTCCAAAAAATAT+AGG | - | chr4_1:69769121-69769140 | None:intergenic | 30.0% | |
| !!! | CTATATTTTTTGGAAAGACG+AGG | + | chr4_1:69769119-69769138 | Msa0568170:intron | 30.0% |
| !! | CAAAAACTTAACACTGATTC+AGG | - | chr4_1:69769276-69769295 | None:intergenic | 30.0% |
| ! | GCGCCTTTTATGTAAAAAAA+TGG | - | chr4_1:69769340-69769359 | None:intergenic | 30.0% |
| GGAGAAACACTATTATTGAA+AGG | + | chr4_1:69769399-69769418 | Msa0568170:CDS | 30.0% | |
| TTATTGAAAGGCCTTTATTC+TGG | + | chr4_1:69769411-69769430 | Msa0568170:CDS | 30.0% | |
| CATGATGTTTCAAACATTCT+AGG | + | chr4_1:69769483-69769502 | Msa0568170:intron | 30.0% | |
| AAAAGTTATTGGCAAGCATA+GGG | + | chr4_1:69769554-69769573 | Msa0568170:intron | 30.0% | |
| ATGTAAAACTCCATCATATC+GGG | - | chr4_1:69769669-69769688 | None:intergenic | 30.0% | |
| GATGTAAAACTCCATCATAT+CGG | - | chr4_1:69769670-69769689 | None:intergenic | 30.0% | |
| AGGCATATGATGTTTCAAAT+AGG | - | chr4_1:69769711-69769730 | None:intergenic | 30.0% | |
| !!! | AACATCATATGCCTCTTTTT+TGG | + | chr4_1:69769717-69769736 | Msa0568170:intron | 30.0% |
| !!! | ACATCATATGCCTCTTTTTT+GGG | + | chr4_1:69769718-69769737 | Msa0568170:intron | 30.0% |
| ! | GAACTATTTTATGGGTAAGA+TGG | - | chr4_1:69769747-69769766 | None:intergenic | 30.0% |
| TGACAATGTGTTTATAAGTG+GGG | - | chr4_1:69769862-69769881 | None:intergenic | 30.0% | |
| CTGACAATGTGTTTATAAGT+GGG | - | chr4_1:69769863-69769882 | None:intergenic | 30.0% | |
| GTCCTTAAGTTTGTACTTTA+AGG | + | chr4_1:69769968-69769987 | Msa0568170:intron | 30.0% | |
| GGATCACTTAGCTATATATA+TGG | + | chr4_1:69770071-69770090 | Msa0568170:intron | 30.0% | |
| TAGCTATATATATGGTTGTC+TGG | + | chr4_1:69770079-69770098 | Msa0568170:intron | 30.0% | |
| ! | GTTCTGATTTTACAAAAGAG+GGG | + | chr4_1:69770112-69770131 | Msa0568170:intron | 30.0% |
| ! | TGAGTTGAAGTGTTAAGTAT+GGG | - | chr4_1:69770558-69770577 | None:intergenic | 30.0% |
| !! | TTGAGTTGAAGTGTTAAGTA+TGG | - | chr4_1:69770559-69770578 | None:intergenic | 30.0% |
| !! | TTGCTTTAAAATCGTAAGTC+TGG | + | chr4_1:69770587-69770606 | Msa0568170:intron | 30.0% |
| ! | TGTTATCATTCTTTTGTTGC+TGG | + | chr4_1:69770669-69770688 | Msa0568170:intron | 30.0% |
| ATGGTTGAAAACTGTTTCAT+TGG | + | chr4_1:69770861-69770880 | Msa0568170:intron | 30.0% | |
| TGGTTGAAAACTGTTTCATT+GGG | + | chr4_1:69770862-69770881 | Msa0568170:intron | 30.0% | |
| TAAACAAAATATCACAGGTG+CGG | - | chr4_1:69771064-69771083 | None:intergenic | 30.0% | |
| ! | GTATTGATATTTCCAATCAC+AGG | + | chr4_1:69771096-69771115 | Msa0568170:intron | 30.0% |
| ATTGATATTTCCAATCACAG+GGG | + | chr4_1:69771098-69771117 | Msa0568170:intron | 30.0% | |
| AAATATCACAATAGTGGCTT+GGG | - | chr4_1:69771278-69771297 | None:intergenic | 30.0% | |
| AAAATATCACAATAGTGGCT+TGG | - | chr4_1:69771279-69771298 | None:intergenic | 30.0% | |
| GCAACAAAATATCACAATAG+TGG | - | chr4_1:69771284-69771303 | None:intergenic | 30.0% | |
| !! | ATAACTTTTGTTTGCCAGAA+AGG | - | chr4_1:69771331-69771350 | None:intergenic | 30.0% |
| ACATGTAGGAAATACCTATT+TGG | + | chr4_1:69771459-69771478 | Msa0568170:intron | 30.0% | |
| CATGTAGGAAATACCTATTT+GGG | + | chr4_1:69771460-69771479 | Msa0568170:intron | 30.0% | |
| ATGTAGGAAATACCTATTTG+GGG | + | chr4_1:69771461-69771480 | Msa0568170:intron | 30.0% | |
| ATCTTTGATAAACCCCAAAT+AGG | - | chr4_1:69771476-69771495 | None:intergenic | 30.0% | |
| GATCCAGAAAATGCAATTAT+TGG | + | chr4_1:69771583-69771602 | Msa0568170:CDS | 30.0% | |
| GCTTGACAAAATAAGATTCA+AGG | - | chr4_1:69771787-69771806 | None:intergenic | 30.0% | |
| !!! | TGTAATTTTTTGTGGATGGT+AGG | + | chr4_1:69772091-69772110 | Msa0568170:intron | 30.0% |
| ! | TGGTAGGTAAATAGGTTTTT+CGG | + | chr4_1:69772107-69772126 | Msa0568170:intron | 30.0% |
| !! | TGTTGCTTTGTTAAGCATTA+TGG | + | chr4_1:69772180-69772199 | Msa0568170:intron | 30.0% |
| TATGTGTATCAGGTAAAAAC+AGG | - | chr4_1:69772328-69772347 | None:intergenic | 30.0% | |
| AATCTACAATTCCCTTGTAT+TGG | - | chr4_1:69772456-69772475 | None:intergenic | 30.0% | |
| TCAAACCATTATTAAGGAAG+AGG | + | chr4_1:69772480-69772499 | Msa0568170:CDS | 30.0% | |
| CAAACCATTATTAAGGAAGA+GGG | + | chr4_1:69772481-69772500 | Msa0568170:CDS | 30.0% | |
| AAATTATGTTCTACAGCCTT+GGG | + | chr4_1:69772585-69772604 | Msa0568170:intron | 30.0% | |
| ATAGGTGGTTCAATATTCTT+TGG | + | chr4_1:69772721-69772740 | Msa0568170:CDS | 30.0% | |
| TACATTTCGAATTAACCAGA+GGG | - | chr4_1:69772900-69772919 | None:intergenic | 30.0% | |
| ATACATTTCGAATTAACCAG+AGG | - | chr4_1:69772901-69772920 | None:intergenic | 30.0% | |
| CGAATACTACAAAACTAGAT+GGG | - | chr4_1:69772925-69772944 | None:intergenic | 30.0% | |
| !!! | CCATCTAGTTTTGTAGTATT+CGG | + | chr4_1:69772923-69772942 | Msa0568170:three_prime_UTR | 30.0% |
| !!! | CATCTAGTTTTGTAGTATTC+GGG | + | chr4_1:69772924-69772943 | Msa0568170:three_prime_UTR | 30.0% |
| ATGTATGTATTCTGCGGAAA+CGG | - | chr4_1:69767447-69767466 | None:intergenic | 35.0% | |
| ! | AAACCTCTTTTGTTCAGTGA+TGG | + | chr4_1:69767470-69767489 | Msa0568170:exon | 35.0% |
| TGAAGTGATGTGAAACATAC+CGG | - | chr4_1:69767535-69767554 | None:intergenic | 35.0% | |
| ! | TTCTTTTGCATCTGTTAGTG+TGG | + | chr4_1:69768210-69768229 | Msa0568170:CDS | 35.0% |
| ! | TCTTTTGCATCTGTTAGTGT+GGG | + | chr4_1:69768211-69768230 | Msa0568170:CDS | 35.0% |
| AAAGTGCGTAAGAAGTCAAA+TGG | - | chr4_1:69768247-69768266 | None:intergenic | 35.0% | |
| !!! | GACTTCTTACGCACTTTTTT+CGG | + | chr4_1:69768250-69768269 | Msa0568170:CDS | 35.0% |
| ! | TCGCTTTGATAGCAGAAAAA+TGG | - | chr4_1:69768345-69768364 | None:intergenic | 35.0% |
| TTTCTGCTATCAAAGCGAAA+AGG | + | chr4_1:69768347-69768366 | Msa0568170:intron | 35.0% | |
| ! | ACCATTTGAGGCCTAAAAAA+GGG | - | chr4_1:69768611-69768630 | None:intergenic | 35.0% |
| ! | AACCATTTGAGGCCTAAAAA+AGG | - | chr4_1:69768612-69768631 | None:intergenic | 35.0% |
| TTTAGCCCTATTTGAGTAGA+AGG | + | chr4_1:69768675-69768694 | Msa0568170:intron | 35.0% | |
| ATATATGAATGAGGGATTGG+GGG | - | chr4_1:69768723-69768742 | None:intergenic | 35.0% | |
| CATATATGAATGAGGGATTG+GGG | - | chr4_1:69768724-69768743 | None:intergenic | 35.0% | |
| GCATATATGAATGAGGGATT+GGG | - | chr4_1:69768725-69768744 | None:intergenic | 35.0% | |
| TGCATATATGAATGAGGGAT+TGG | - | chr4_1:69768726-69768745 | None:intergenic | 35.0% | |
| CTTCACTGCATATATGAATG+AGG | - | chr4_1:69768732-69768751 | None:intergenic | 35.0% | |
| !! | TTTTGGAAAGACGAGGAAAA+AGG | + | chr4_1:69769126-69769145 | Msa0568170:intron | 35.0% |
| ! | TTGCTATTAAGAAAAGGCCA+TGG | - | chr4_1:69769305-69769324 | None:intergenic | 35.0% |
| CGAAAGAAGCCAAAAGTTAT+TGG | + | chr4_1:69769543-69769562 | Msa0568170:intron | 35.0% | |
| ! | CTATGCTTGCCAATAACTTT+TGG | - | chr4_1:69769555-69769574 | None:intergenic | 35.0% |
| CAAAAGTTATTGGCAAGCAT+AGG | + | chr4_1:69769553-69769572 | Msa0568170:intron | 35.0% | |
| ACAGATTAAGAACTCCTTGT+TGG | + | chr4_1:69769623-69769642 | Msa0568170:intron | 35.0% | |
| GTATCAATAAGTCTCCAACA+AGG | - | chr4_1:69769640-69769659 | None:intergenic | 35.0% | |
| TAGGCAAATTCTATGCAAGT+AGG | - | chr4_1:69769692-69769711 | None:intergenic | 35.0% | |
| !!! | CATCATATGCCTCTTTTTTG+GGG | + | chr4_1:69769719-69769738 | Msa0568170:intron | 35.0% |
| GACAATGTGTTTATAAGTGG+GGG | - | chr4_1:69769861-69769880 | None:intergenic | 35.0% | |
| CCTGACAATGTGTTTATAAG+TGG | - | chr4_1:69769864-69769883 | None:intergenic | 35.0% | |
| CCACTTATAAACACATTGTC+AGG | + | chr4_1:69769861-69769880 | Msa0568170:intron | 35.0% | |
| ACTATTAAAGAGTCCCACAT+CGG | - | chr4_1:69769898-69769917 | None:intergenic | 35.0% | |
| AACACAGACAGGATAATTTC+AGG | - | chr4_1:69769939-69769958 | None:intergenic | 35.0% | |
| CGCCTTAAAGTACAAACTTA+AGG | - | chr4_1:69769973-69769992 | None:intergenic | 35.0% | |
| !! | TGTACTTTAAGGCGTAGTAA+TGG | + | chr4_1:69769979-69769998 | Msa0568170:intron | 35.0% |
| ! | AGTATGGGACTTGTTCTAAA+GGG | - | chr4_1:69770543-69770562 | None:intergenic | 35.0% |
| ! | AAGTATGGGACTTGTTCTAA+AGG | - | chr4_1:69770544-69770563 | None:intergenic | 35.0% |
| ATCGTAAGTCTGGCTAATTA+TGG | + | chr4_1:69770597-69770616 | Msa0568170:intron | 35.0% | |
| TCTGGCTAATTATGGTTATG+TGG | + | chr4_1:69770605-69770624 | Msa0568170:intron | 35.0% | |
| TCCAATACAAGCCAAATAGA+TGG | - | chr4_1:69770633-69770652 | None:intergenic | 35.0% | |
| TTTAAACTTCCTTAGACTGC+AGG | + | chr4_1:69770755-69770774 | Msa0568170:intron | 35.0% | |
| ! | TGTTCGCTTTATTGCATCTA+GGG | + | chr4_1:69770963-69770982 | Msa0568170:CDS | 35.0% |
| AAACAAAATATCACAGGTGC+GGG | - | chr4_1:69771063-69771082 | None:intergenic | 35.0% | |
| !!! | GGTATGGATCTTTTTTACTG+CGG | + | chr4_1:69771119-69771138 | Msa0568170:CDS | 35.0% |
| !!! | GTATGGATCTTTTTTACTGC+GGG | + | chr4_1:69771120-69771139 | Msa0568170:CDS | 35.0% |
| ! | CAAAACTGAATAGCATCGAA+GGG | - | chr4_1:69771151-69771170 | None:intergenic | 35.0% |
| ! | TCGTTTAGGTTATATGCTTG+CGG | + | chr4_1:69771186-69771205 | Msa0568170:CDS | 35.0% |
| GCAAGCATAATTTAGTAGCA+TGG | + | chr4_1:69771398-69771417 | Msa0568170:intron | 35.0% | |
| AATTTAGTAGCATGGATTCG+AGG | + | chr4_1:69771406-69771425 | Msa0568170:intron | 35.0% | |
| ! | GCACCAATAATTGCATTTTC+TGG | - | chr4_1:69771589-69771608 | None:intergenic | 35.0% |
| ACAGTTAAAGCATAAGCTCA+TGG | - | chr4_1:69771681-69771700 | None:intergenic | 35.0% | |
| !! | TTGATTCGGCAGAGTAAATA+CGG | - | chr4_1:69771762-69771781 | None:intergenic | 35.0% |
| TTTGTGGATGGTAGGTAAAT+AGG | + | chr4_1:69772099-69772118 | Msa0568170:intron | 35.0% | |
| AAATGGTATACCACATCACA+AGG | - | chr4_1:69772219-69772238 | None:intergenic | 35.0% | |
| TGTCATCAAGACAAGGTTAA+TGG | + | chr4_1:69772285-69772304 | Msa0568170:CDS | 35.0% | |
| AAACAGGACTAAATCTTACC+TGG | - | chr4_1:69772312-69772331 | None:intergenic | 35.0% | |
| CAAATTATGTTCTACAGCCT+TGG | + | chr4_1:69772584-69772603 | Msa0568170:intron | 35.0% | |
| TATCTTTCTGAATTTGCCCA+AGG | - | chr4_1:69772604-69772623 | None:intergenic | 35.0% | |
| ACATTTCGAATTAACCAGAG+GGG | - | chr4_1:69772899-69772918 | None:intergenic | 35.0% | |
| CCGAATACTACAAAACTAGA+TGG | - | chr4_1:69772926-69772945 | None:intergenic | 35.0% | |
| TAGCTTCAAAATCTAGGTCT+TGG | + | chr4_1:69772968-69772987 | Msa0568170:three_prime_UTR | 35.0% | |
| TCAAAATCTAGGTCTTGGAT+TGG | + | chr4_1:69772973-69772992 | Msa0568170:three_prime_UTR | 35.0% | |
| TGTATGTATTCTGCGGAAAC+GGG | - | chr4_1:69767446-69767465 | None:intergenic | 40.0% | |
| ATGAGTCGTCAATCCAAACA+CGG | + | chr4_1:69767789-69767808 | Msa0568170:intron | 40.0% | |
| !! | GGGTTTTGTAAGGATGACTT+AGG | + | chr4_1:69767947-69767966 | Msa0568170:intron | 40.0% |
| ! | CTTTTGCATCTGTTAGTGTG+GGG | + | chr4_1:69768212-69768231 | Msa0568170:CDS | 40.0% |
| !!! | ACCCTTTTTTAGGCCTCAAA+TGG | + | chr4_1:69768607-69768626 | Msa0568170:intron | 40.0% |
| GTCAGCCTTCTACTCAAATA+GGG | - | chr4_1:69768683-69768702 | None:intergenic | 40.0% | |
| AATCTTGCTAACGAGCTTGA+TGG | + | chr4_1:69768836-69768855 | Msa0568170:intron | 40.0% | |
| AGCTTGATGGAATTATGCAG+AGG | + | chr4_1:69768849-69768868 | Msa0568170:intron | 40.0% | |
| GCTTGATGGAATTATGCAGA+GGG | + | chr4_1:69768850-69768869 | Msa0568170:intron | 40.0% | |
| CACTATAAAAACACGTCTGC+AGG | + | chr4_1:69768930-69768949 | Msa0568170:CDS | 40.0% | |
| TAGAGGCTTGATATCCACAT+TGG | - | chr4_1:69769052-69769071 | None:intergenic | 40.0% | |
| GAAAGGCCTTTATTCTGGAT+TGG | + | chr4_1:69769416-69769435 | Msa0568170:CDS | 40.0% | |
| AAGATGGAACCCCAAAAAAG+AGG | - | chr4_1:69769731-69769750 | None:intergenic | 40.0% | |
| TTTGTGACTCTTGAGAATCG+TGG | + | chr4_1:69769781-69769800 | Msa0568170:intron | 40.0% | |
| !! | AACTCACAAGCCAGTTTTGT+GGG | - | chr4_1:69769830-69769849 | None:intergenic | 40.0% |
| ATTATCCTGTCTGTGTTTCG+TGG | + | chr4_1:69769942-69769961 | Msa0568170:intron | 40.0% | |
| !! | AGGGCATCTGCTTTATTTGT+TGG | + | chr4_1:69770396-69770415 | Msa0568170:intron | 40.0% |
| CTTAGCAATTTCTGCTTTGC+AGG | - | chr4_1:69770432-69770451 | None:intergenic | 40.0% | |
| CTGCAAAGCAGAAATTGCTA+AGG | + | chr4_1:69770430-69770449 | Msa0568170:CDS | 40.0% | |
| !!! | GCAAAAGCACTCAGATTTTC+AGG | - | chr4_1:69770462-69770481 | None:intergenic | 40.0% |
| ! | TCTGAGTGCTTTTGCTCATT+TGG | + | chr4_1:69770467-69770486 | Msa0568170:CDS | 40.0% |
| GTTATGTGGAGCCATCTATT+TGG | + | chr4_1:69770619-69770638 | Msa0568170:intron | 40.0% | |
| !! | GCCATCTATTTGGCTTGTAT+TGG | + | chr4_1:69770629-69770648 | Msa0568170:intron | 40.0% |
| GAGAATTAAGCTACCTCTGT+TGG | - | chr4_1:69770818-69770837 | None:intergenic | 40.0% | |
| ! | CATTTTCTTTAATGCTCCGC+AGG | + | chr4_1:69770891-69770910 | Msa0568170:intron | 40.0% |
| TCAAGCAACGAATGCAAACT+GGG | + | chr4_1:69770917-69770936 | Msa0568170:CDS | 40.0% | |
| ! | CTGTTCGCTTTATTGCATCT+AGG | + | chr4_1:69770962-69770981 | Msa0568170:CDS | 40.0% |
| AACAAAATATCACAGGTGCG+GGG | - | chr4_1:69771062-69771081 | None:intergenic | 40.0% | |
| TATTTCCAATCACAGGGGTA+TGG | + | chr4_1:69771103-69771122 | Msa0568170:intron | 40.0% | |
| ! | GCAAAACTGAATAGCATCGA+AGG | - | chr4_1:69771152-69771171 | None:intergenic | 40.0% |
| CTAAACGAATCTGCTCATAG+AGG | - | chr4_1:69771174-69771193 | None:intergenic | 40.0% | |
| CTCTATGAGCAGATTCGTTT+AGG | + | chr4_1:69771172-69771191 | Msa0568170:CDS | 40.0% | |
| TCCACTACTTCATTTGTGCT+TGG | + | chr4_1:69771514-69771533 | Msa0568170:intron | 40.0% | |
| ACCAAGCACAAATGAAGTAG+TGG | - | chr4_1:69771518-69771537 | None:intergenic | 40.0% | |
| !! | GCAATTATTGGTGCTTTTGC+AGG | + | chr4_1:69771595-69771614 | Msa0568170:CDS | 40.0% |
| TTTAACTGTGCTTCAAGCTG+AGG | + | chr4_1:69771692-69771711 | Msa0568170:intron | 40.0% | |
| TGCGCCTACAAGAAACAAAA+TGG | - | chr4_1:69772236-69772255 | None:intergenic | 40.0% | |
| ! | CTTGTCTTGATGACATCAAG+TGG | - | chr4_1:69772280-69772299 | None:intergenic | 40.0% |
| CACTTGATGTCATCAAGACA+AGG | + | chr4_1:69772278-69772297 | Msa0568170:CDS | 40.0% | |
| !! | ATTCCCTTGTATTGGTTTGC+AGG | - | chr4_1:69772448-69772467 | None:intergenic | 40.0% |
| !! | ATACCTTCAGAAAAGCACCT+GGG | - | chr4_1:69772507-69772526 | None:intergenic | 40.0% |
| TTCAGAAAGATACAGCCACA+TGG | + | chr4_1:69772612-69772631 | Msa0568170:intron | 40.0% | |
| ! | GGAAACGTTTTGTACTCTCA+AGG | - | chr4_1:69772750-69772769 | None:intergenic | 40.0% |
| AGGGGTAATACATTGTACAC+GGG | - | chr4_1:69772881-69772900 | None:intergenic | 40.0% | |
| GAGGGGTAATACATTGTACA+CGG | - | chr4_1:69772882-69772901 | None:intergenic | 40.0% | |
| TGTACAATGTATTACCCCTC+TGG | + | chr4_1:69772882-69772901 | Msa0568170:three_prime_UTR | 40.0% | |
| GAGCCATCACTGAACAAAAG+AGG | - | chr4_1:69767476-69767495 | None:intergenic | 45.0% | |
| TCCTCTTACACTCTCCGTTA+CGG | + | chr4_1:69767494-69767513 | Msa0568170:CDS | 45.0% | |
| AGTGATGTGAAACATACCGG+AGG | - | chr4_1:69767532-69767551 | None:intergenic | 45.0% | |
| TCGTGAATATAGGCCGTGTT+TGG | - | chr4_1:69767805-69767824 | None:intergenic | 45.0% | |
| AAAACCCGCTGGTAAGATGA+GGG | - | chr4_1:69767934-69767953 | None:intergenic | 45.0% | |
| !! | TCTTACCAGCGGGTTTTGTA+AGG | + | chr4_1:69767937-69767956 | Msa0568170:intron | 45.0% |
| ACATATGAAGGGATCGCAAC+TGG | - | chr4_1:69768462-69768481 | None:intergenic | 45.0% | |
| GGTCAGCCTTCTACTCAAAT+AGG | - | chr4_1:69768684-69768703 | None:intergenic | 45.0% | |
| GGGGGATAACATCTTAGTGT+TGG | - | chr4_1:69768705-69768724 | None:intergenic | 45.0% | |
| !! | TTGTTTTGTTAGGCTGCTCG+CGG | + | chr4_1:69769375-69769394 | Msa0568170:intron | 45.0% |
| !! | GCCTTTATTCTGGATTGGCA+GGG | + | chr4_1:69769421-69769440 | Msa0568170:CDS | 45.0% |
| TCCCTGCCAATCCAGAATAA+AGG | - | chr4_1:69769425-69769444 | None:intergenic | 45.0% | |
| GAAACATCATGCTATCCACG+AGG | - | chr4_1:69769474-69769493 | None:intergenic | 45.0% | |
| ATACTCCTGTCCCGATATGA+TGG | + | chr4_1:69769656-69769675 | Msa0568170:intron | 45.0% | |
| AAACTCCATCATATCGGGAC+AGG | - | chr4_1:69769664-69769683 | None:intergenic | 45.0% | |
| GTGGGGTTGTGTTAGGATTT+GGG | - | chr4_1:69769812-69769831 | None:intergenic | 45.0% | |
| TGTGGGGTTGTGTTAGGATT+TGG | - | chr4_1:69769813-69769832 | None:intergenic | 45.0% | |
| !! | CAGTTTTGTGGGGTTGTGTT+AGG | - | chr4_1:69769819-69769838 | None:intergenic | 45.0% |
| CTAACACAACCCCACAAAAC+TGG | + | chr4_1:69769817-69769836 | Msa0568170:intron | 45.0% | |
| !! | ACTCACAAGCCAGTTTTGTG+GGG | - | chr4_1:69769829-69769848 | None:intergenic | 45.0% |
| ! | CAACTCACAAGCCAGTTTTG+TGG | - | chr4_1:69769831-69769850 | None:intergenic | 45.0% |
| !! | CAAAACTGGCTTGTGAGTTG+AGG | + | chr4_1:69769831-69769850 | Msa0568170:intron | 45.0% |
| ! | TTTTGTTCGCGTTCCAACAG+AGG | + | chr4_1:69770802-69770821 | Msa0568170:CDS | 45.0% |
| ATTCGTTGCTTGACAACCTG+CGG | - | chr4_1:69770910-69770929 | None:intergenic | 45.0% | |
| GTCAAGCAACGAATGCAAAC+TGG | + | chr4_1:69770916-69770935 | Msa0568170:CDS | 45.0% | |
| ! | TCGCTTTATTGCATCTAGGG+AGG | + | chr4_1:69770966-69770985 | Msa0568170:CDS | 45.0% |
| ! | CGCTTTATTGCATCTAGGGA+GGG | + | chr4_1:69770967-69770986 | Msa0568170:CDS | 45.0% |
| AAGATCCATACCCCTGTGAT+TGG | - | chr4_1:69771111-69771130 | None:intergenic | 45.0% | |
| TTTGCCAGAAAGGTCTGAGA+GGG | - | chr4_1:69771321-69771340 | None:intergenic | 45.0% | |
| GCACCACCATATTTCAGACA+CGG | + | chr4_1:69772005-69772024 | Msa0568170:intron | 45.0% | |
| CACCACCATATTTCAGACAC+GGG | + | chr4_1:69772006-69772025 | Msa0568170:intron | 45.0% | |
| ! | AAGCTCCCGTGTCTGAAATA+TGG | - | chr4_1:69772014-69772033 | None:intergenic | 45.0% |
| TTTCTTGTAGGCGCACTAAC+CGG | + | chr4_1:69772241-69772260 | Msa0568170:intron | 45.0% | |
| AAGTGGTGTGGTTATAGCTC+CGG | - | chr4_1:69772263-69772282 | None:intergenic | 45.0% | |
| ! | CTTGATGACATCAAGTGGTG+TGG | - | chr4_1:69772275-69772294 | None:intergenic | 45.0% |
| CAAGACAAGGTTAATGGTCC+AGG | + | chr4_1:69772291-69772310 | Msa0568170:CDS | 45.0% | |
| CACGAGAGGATATGTGTATC+AGG | - | chr4_1:69772338-69772357 | None:intergenic | 45.0% | |
| GCAGAGTAATTAGACACGAG+AGG | - | chr4_1:69772352-69772371 | None:intergenic | 45.0% | |
| ! | TCCTATTTTCCTCCTCCTCA+AGG | + | chr4_1:69772420-69772439 | Msa0568170:intron | 45.0% |
| ! | CCTATTTTCCTCCTCCTCAA+GGG | + | chr4_1:69772421-69772440 | Msa0568170:intron | 45.0% |
| GGACCTGCAAACCAATACAA+GGG | + | chr4_1:69772442-69772461 | Msa0568170:CDS | 45.0% | |
| TGGGCCCTCTTCCTTAATAA+TGG | - | chr4_1:69772488-69772507 | None:intergenic | 45.0% | |
| ATTATTAAGGAAGAGGGCCC+AGG | + | chr4_1:69772487-69772506 | Msa0568170:CDS | 45.0% | |
| !! | CATACCTTCAGAAAAGCACC+TGG | - | chr4_1:69772508-69772527 | None:intergenic | 45.0% |
| ! | ATGCCTATCCAAAGCACTCT+TGG | - | chr4_1:69772703-69772722 | None:intergenic | 45.0% |
| ! | AGAGTGCTTTGGATAGGCAT+AGG | + | chr4_1:69772703-69772722 | Msa0568170:CDS | 45.0% |
| ! | CACTGAGCTAGTTTAGGTGT+AGG | - | chr4_1:69772787-69772806 | None:intergenic | 45.0% |
| !!! | AAAAATAATTTAGTTTTATT+TGG | + | chr4_1:69771931-69771950 | Msa0568170:intron | 5.0% |
| ! | ACCGTAACGGAGAGTGTAAG+AGG | - | chr4_1:69767498-69767517 | None:intergenic | 50.0% |
| GGCAGAATCTTGCACCGTAA+CGG | - | chr4_1:69767511-69767530 | None:intergenic | 50.0% | |
| ! | TCAATAGTGTTGGGCGTGAG+AGG | + | chr4_1:69767836-69767855 | Msa0568170:intron | 50.0% |
| GATACCCCTCATCTTACCAG+CGG | + | chr4_1:69767926-69767945 | Msa0568170:intron | 50.0% | |
| ATACCCCTCATCTTACCAGC+GGG | + | chr4_1:69767927-69767946 | Msa0568170:intron | 50.0% | |
| AAACCCGCTGGTAAGATGAG+GGG | - | chr4_1:69767933-69767952 | None:intergenic | 50.0% | |
| CAAAACCCGCTGGTAAGATG+AGG | - | chr4_1:69767935-69767954 | None:intergenic | 50.0% | |
| GTCATCCTTACAAAACCCGC+TGG | - | chr4_1:69767945-69767964 | None:intergenic | 50.0% | |
| GCAACTGGTGTGTGTGAGAA+CGG | - | chr4_1:69768447-69768466 | None:intergenic | 50.0% | |
| !! | TATGCAGAGGGTGTTATCGC+AGG | + | chr4_1:69768862-69768881 | Msa0568170:intron | 50.0% |
| GGCAGTGATGCAAAGTCTAG+AGG | - | chr4_1:69769069-69769088 | None:intergenic | 50.0% | |
| ACTTTGCATCACTGCCAGCT+AGG | + | chr4_1:69769073-69769092 | Msa0568170:intron | 50.0% | |
| CCACAACAATCAAGCCTAGC+TGG | - | chr4_1:69769090-69769109 | None:intergenic | 50.0% | |
| CCAGCTAGGCTTGATTGTTG+TGG | + | chr4_1:69769087-69769106 | Msa0568170:intron | 50.0% | |
| !! | GGCCTTTATTCTGGATTGGC+AGG | + | chr4_1:69769420-69769439 | Msa0568170:CDS | 50.0% |
| TGCTATCCACGAGGATCTCA+CGG | - | chr4_1:69769465-69769484 | None:intergenic | 50.0% | |
| AGGCCATCTCTTATCCGATG+TGG | + | chr4_1:69769881-69769900 | Msa0568170:intron | 50.0% | |
| GGCCATCTCTTATCCGATGT+GGG | + | chr4_1:69769882-69769901 | Msa0568170:intron | 50.0% | |
| GTCCCACATCGGATAAGAGA+TGG | - | chr4_1:69769887-69769906 | None:intergenic | 50.0% | |
| ACACTCCACGAAACACAGAC+AGG | - | chr4_1:69769950-69769969 | None:intergenic | 50.0% | |
| AGATGCAGCAATGCCTCCTA+TGG | - | chr4_1:69770783-69770802 | None:intergenic | 50.0% | |
| GCGAACAGCATTAGAAGCTG+AGG | - | chr4_1:69770950-69770969 | None:intergenic | 50.0% | |
| ! | GCATCTAGGGAGGGCTTTAA+AGG | + | chr4_1:69770976-69770995 | Msa0568170:CDS | 50.0% |
| ATATCACAGGTGCGGGGAAT+AGG | - | chr4_1:69771056-69771075 | None:intergenic | 50.0% | |
| TTGCCAGAAAGGTCTGAGAG+GGG | - | chr4_1:69771320-69771339 | None:intergenic | 50.0% | |
| GTTTGCCAGAAAGGTCTGAG+AGG | - | chr4_1:69771322-69771341 | None:intergenic | 50.0% | |
| ! | CTCCCGTGTCTGAAATATGG+TGG | - | chr4_1:69772011-69772030 | None:intergenic | 50.0% |
| TACCACATCACAAGGCTGCT+AGG | - | chr4_1:69772211-69772230 | None:intergenic | 50.0% | |
| CCCTTGAGGAGGAGGAAAAT+AGG | - | chr4_1:69772424-69772443 | None:intergenic | 50.0% | |
| !! | ATTGGTTTGCAGGTCCCTTG+AGG | - | chr4_1:69772438-69772457 | None:intergenic | 50.0% |
| GGGACCTGCAAACCAATACA+AGG | + | chr4_1:69772441-69772460 | Msa0568170:intron | 50.0% | |
| !! | GTATTGGGCCAAGAGTGCTT+TGG | + | chr4_1:69772692-69772711 | Msa0568170:CDS | 50.0% |
| ! | GTGCTTTGGATAGGCATAGG+TGG | + | chr4_1:69772706-69772725 | Msa0568170:CDS | 50.0% |
| CAAAACGTTTCCTTGCCGAG+AGG | + | chr4_1:69772758-69772777 | Msa0568170:CDS | 50.0% | |
| TTTAGGTGTAGGACGCCTCT+CGG | - | chr4_1:69772776-69772795 | None:intergenic | 50.0% | |
| ! | CTGCAGCACTGAGCTAGTTT+AGG | - | chr4_1:69772793-69772812 | None:intergenic | 50.0% |
| ACGGTGCAAGATTCTGCCTC+CGG | + | chr4_1:69767513-69767532 | Msa0568170:CDS | 55.0% | |
| ! | GTTGGGCGTGAGAGGTGTAT+TGG | + | chr4_1:69767844-69767863 | Msa0568170:intron | 55.0% |
| GTGTGTGTGAGAACGGAGTG+AGG | - | chr4_1:69768440-69768459 | None:intergenic | 55.0% | |
| ! | GTTATCGCAGGAGGTACAGC+TGG | + | chr4_1:69768874-69768893 | Msa0568170:CDS | 55.0% |
| ! | TTTTGTTAGGCTGCTCGCGG+AGG | + | chr4_1:69769378-69769397 | Msa0568170:intron | 55.0% |
| CTCACGGTAAGACACCAGCA+AGG | - | chr4_1:69769449-69769468 | None:intergenic | 55.0% | |
| GTCTTACCGTGAGATCCTCG+TGG | + | chr4_1:69769456-69769475 | Msa0568170:intron | 55.0% | |
| CCTATGGCACCTGCAGTCTA+AGG | - | chr4_1:69770767-69770786 | None:intergenic | 55.0% | |
| ! | CCTTAGACTGCAGGTGCCAT+AGG | + | chr4_1:69770764-69770783 | Msa0568170:intron | 55.0% |
| ! | TAGACTGCAGGTGCCATAGG+AGG | + | chr4_1:69770767-69770786 | Msa0568170:intron | 55.0% |
| TGCCAGAAAGGTCTGAGAGG+GGG | - | chr4_1:69771319-69771338 | None:intergenic | 55.0% | |
| ! | GTCCTAGCAGCCTTGTGATG+TGG | + | chr4_1:69772206-69772225 | Msa0568170:intron | 55.0% |
| !! | GGGCCAAGAGTGCTTTGGAT+AGG | + | chr4_1:69772697-69772716 | Msa0568170:CDS | 55.0% |
| !! | GCAGAGGGTGTTATCGCAGG+AGG | + | chr4_1:69768865-69768884 | Msa0568170:intron | 60.0% |
| ! | GGATTGGCAGGGAACCTTGC+TGG | + | chr4_1:69769432-69769451 | Msa0568170:CDS | 60.0% |
| TCCCCCCTCTCAGACCTTTC+TGG | + | chr4_1:69771314-69771333 | Msa0568170:intron | 60.0% | |
| GCCAGAAAGGTCTGAGAGGG+GGG | - | chr4_1:69771318-69771337 | None:intergenic | 60.0% | |
| TTGCAGGTCCCTTGAGGAGG+AGG | - | chr4_1:69772432-69772451 | None:intergenic | 60.0% | |
| GGTTTGCAGGTCCCTTGAGG+AGG | - | chr4_1:69772435-69772454 | None:intergenic | 60.0% | |
| ! | GGGCCCAGGTGCTTTTCTGA+AGG | + | chr4_1:69772501-69772520 | Msa0568170:CDS | 60.0% |
| GTGTAGGACGCCTCTCGGCA+AGG | - | chr4_1:69772771-69772790 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 69767412 | 69773020 | 69767412 | ID=Msa0568170;Name=Msa0568170 |
| chr4_1 | mRNA | 69767412 | 69773020 | 69767412 | ID=Msa0568170-mRNA-1;Parent=Msa0568170;Name=Msa0568170-mRNA-1;_AED=0.14;_eAED=0.14;_QI=77|1|1|1|1|1|12|183|326 |
| chr4_1 | exon | 69767412 | 69767534 | 69767412 | ID=Msa0568170-mRNA-1:exon:23312;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69768170 | 69768271 | 69768170 | ID=Msa0568170-mRNA-1:exon:23313;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69768869 | 69768951 | 69768869 | ID=Msa0568170-mRNA-1:exon:23314;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69769387 | 69769463 | 69769387 | ID=Msa0568170-mRNA-1:exon:23315;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69770398 | 69770488 | 69770398 | ID=Msa0568170-mRNA-1:exon:23316;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69770770 | 69770823 | 69770770 | ID=Msa0568170-mRNA-1:exon:23317;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69770913 | 69771008 | 69770913 | ID=Msa0568170-mRNA-1:exon:23318;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69771118 | 69771207 | 69771118 | ID=Msa0568170-mRNA-1:exon:23319;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69771565 | 69771616 | 69771565 | ID=Msa0568170-mRNA-1:exon:23320;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69772251 | 69772312 | 69772251 | ID=Msa0568170-mRNA-1:exon:23321;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69772442 | 69772522 | 69772442 | ID=Msa0568170-mRNA-1:exon:23322;Parent=Msa0568170-mRNA-1 |
| chr4_1 | exon | 69772691 | 69773020 | 69772691 | ID=Msa0568170-mRNA-1:exon:23323;Parent=Msa0568170-mRNA-1 |
| chr4_1 | five_prime_UTR | 69767412 | 69767488 | 69767412 | ID=Msa0568170-mRNA-1:five_prime_utr;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69767489 | 69767534 | 69767489 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69768170 | 69768271 | 69768170 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69768869 | 69768951 | 69768869 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69769387 | 69769463 | 69769387 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69770398 | 69770488 | 69770398 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69770770 | 69770823 | 69770770 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69770913 | 69771008 | 69770913 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69771118 | 69771207 | 69771118 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69771565 | 69771616 | 69771565 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69772251 | 69772312 | 69772251 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69772442 | 69772522 | 69772442 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | CDS | 69772691 | 69772837 | 69772691 | ID=Msa0568170-mRNA-1:cds;Parent=Msa0568170-mRNA-1 |
| chr4_1 | three_prime_UTR | 69772838 | 69773020 | 69772838 | ID=Msa0568170-mRNA-1:three_prime_utr;Parent=Msa0568170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
