AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0560200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0560200 MtrunA17_Chr4g0050181 86.792 371 22 3 28 371 26 396 0.0 620
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0560200 AT1G60600.2 65.574 305 82 2 80 362 79 382 1.39e-129 377
Msa0560200 AT1G60600.1 65.625 288 76 2 97 362 1 287 2.95e-121 352

Find 116 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTTGTAATGTTTCTT+AGG 0.101575 4_1:+59436944 None:intergenic
TTTGGTGCTGCACTGGCTTT+TGG 0.190762 4_1:-59437458 Msa0560200:CDS
TTACAAATTTGAATTGAAAT+TGG 0.205056 4_1:-59436933 Msa0560200:three_prime_UTR
ACCATTTCGGTTGAGCTATC+AGG 0.266778 4_1:-59438376 Msa0560200:CDS
TGCCTTGCTCTCGGCTTCAT+TGG 0.290145 4_1:-59438580 Msa0560200:CDS
GAGAATAGCGTTTAGGTAAA+AGG 0.298434 4_1:-59437391 Msa0560200:three_prime_UTR
TCGGCTTCATTGGGCTGACT+TGG 0.299809 4_1:-59438570 Msa0560200:CDS
AGAGCTATATCTTGGCTCTT+GGG 0.319137 4_1:-59437308 Msa0560200:three_prime_UTR
TGCTTTGTTTGGTGCTGCAC+TGG 0.320529 4_1:-59437465 Msa0560200:CDS
CTTGTCGCTCTATGCTCTTT+TGG 0.331194 4_1:-59437843 Msa0560200:CDS
ACCTATTTACTCTGTTGCTT+TGG 0.332770 4_1:-59439743 Msa0560200:CDS
TTTCAATGGAAACATTGATT+TGG 0.343203 4_1:-59439780 Msa0560200:CDS
TGCTGTAGTGTCCACCATTT+CGG 0.343848 4_1:-59438389 Msa0560200:intron
CTCACTTGTGCAATTATTTG+CGG 0.348757 4_1:-59438508 Msa0560200:CDS
TATTTGCGGCTATATATATC+AGG 0.358239 4_1:-59438494 Msa0560200:intron
GCCTTGCTCTCGGCTTCATT+GGG 0.359448 4_1:-59438579 Msa0560200:CDS
GGATTTAATACTTTGTTGTA+TGG 0.365893 4_1:-59436912 Msa0560200:three_prime_UTR
CAAATTTGTAATGTTTCTTA+GGG 0.371643 4_1:+59436945 None:intergenic
CTTCAGTTCTTGTTATTACC+TGG 0.372213 4_1:-59438919 Msa0560200:CDS
TGCCTGCATCAACAAGTTTA+CGG 0.377997 4_1:-59437165 Msa0560200:three_prime_UTR
TTTGAACTTGAAATCTCCTA+TGG 0.381122 4_1:+59439896 None:intergenic
AGGATTGTAGTAAGAGGATA+TGG 0.383459 4_1:-59440328 Msa0560200:intron
TGGATTGGTATTGGCTAGAA+TGG 0.395431 4_1:-59437438 Msa0560200:CDS
AGTTGGAAAATTATCGCCTT+TGG 0.398616 4_1:-59438004 Msa0560200:intron
CTGTTCCACTCAAGGGGAAA+TGG 0.399698 4_1:+59438186 None:intergenic
TACCTAAACGCTATTCTCAT+TGG 0.401078 4_1:+59437396 None:intergenic
TGGAGTTGACAAGAACAAAA+AGG 0.403308 4_1:-59438774 Msa0560200:CDS
ACCAAAGCAACAGAGTAAAT+AGG 0.404150 4_1:+59439742 None:intergenic
GTGAGGTTGCATGCTTTGTT+TGG 0.412359 4_1:-59437476 Msa0560200:CDS
AGATGGCAACATTTGCTGAT+AGG 0.414357 4_1:-59437041 Msa0560200:three_prime_UTR
AAGAGCTATATCTTGGCTCT+TGG 0.422433 4_1:-59437309 Msa0560200:three_prime_UTR
TTGTGCAGGAGGGGCTGAAT+TGG 0.442191 4_1:-59439857 Msa0560200:CDS
GAGCTATATCTTGGCTCTTG+GGG 0.443683 4_1:-59437307 Msa0560200:three_prime_UTR
CTCCAATGAGAATAGCGTTT+AGG 0.444897 4_1:-59437398 Msa0560200:exon
ATTGTTACTGTAGTAACCTT+AGG 0.451086 4_1:-59440376 Msa0560200:CDS
TTGAATTTGGAAAGCCGTAC+AGG 0.451252 4_1:-59438625 Msa0560200:intron
AATTCAAGAGGATATTTCAA+TGG 0.453590 4_1:-59439794 Msa0560200:CDS
CGGCTTCATTGGGCTGACTT+GGG 0.456704 4_1:-59438569 Msa0560200:CDS
AGGCATCATGTGCGTTGTGC+AGG 0.456822 4_1:-59439871 Msa0560200:CDS
CCCTGATAGCTCAACCGAAA+TGG 0.458150 4_1:+59438375 None:intergenic
AGCTTATACAGCCACATGAC+GGG 0.458469 4_1:+59437233 None:intergenic
GCTGACTTGGGCCGCTATTG+AGG 0.460129 4_1:-59438557 Msa0560200:CDS
AAAGGAAATTATATGAAGTA+AGG 0.466349 4_1:-59437373 Msa0560200:three_prime_UTR
TAACGGCATCAGAAGAGGTC+AGG 0.466740 4_1:-59437134 Msa0560200:three_prime_UTR
CAATGGAAACATTGATTTGG+AGG 0.468559 4_1:-59439777 Msa0560200:CDS
GGAGATTTCAAGTTCAAAGA+AGG 0.468781 4_1:-59439891 Msa0560200:CDS
GAATCAGTTGTAAACTTGGT+TGG 0.469600 4_1:-59438752 Msa0560200:CDS
CAACCTCACACAAAAGTACT+TGG 0.469806 4_1:+59437490 None:intergenic
TCGGTTGAGCTATCAGGGAC+TGG 0.476574 4_1:-59438370 Msa0560200:CDS
AGTTCCAGCATTGAAAATGT+TGG 0.476733 4_1:-59439823 Msa0560200:CDS
GCTTACTTATGCCTTGCTCT+CGG 0.479671 4_1:-59438589 Msa0560200:CDS
AAAGGAATCAGTTGTAAACT+TGG 0.485785 4_1:-59438756 Msa0560200:CDS
CGGTTGAGCTATCAGGGACT+GGG 0.491309 4_1:-59438369 Msa0560200:CDS
AAATCAAAGCGCCTAGGTAG+TGG 0.493611 4_1:+59437098 None:intergenic
TTTAAAATGTAGTGGTAGTG+TGG 0.496785 4_1:-59439929 Msa0560200:CDS
CTTTCAGCATCAATCCTCGT+TGG 0.502661 4_1:-59438161 Msa0560200:CDS
CCATTTCGGTTGAGCTATCA+GGG 0.502786 4_1:-59438375 Msa0560200:CDS
TGCATAGTTGATTAATAAGA+TGG 0.503744 4_1:-59437058 Msa0560200:three_prime_UTR
CATCATGTGCGTTGTGCAGG+AGG 0.507154 4_1:-59439868 Msa0560200:CDS
CAGTTGTAAACTTGGTTGGA+AGG 0.509549 4_1:-59438748 Msa0560200:intron
ATCATGTGCGTTGTGCAGGA+GGG 0.514543 4_1:-59439867 Msa0560200:CDS
ACTTGGGCCGCTATTGAGGC+AGG 0.514777 4_1:-59438553 Msa0560200:CDS
CATGGAAGGATTGTAGTAAG+AGG 0.517505 4_1:-59440334 Msa0560200:CDS
CCGGTGCAAGAGCTATATCT+TGG 0.520752 4_1:-59437316 Msa0560200:three_prime_UTR
GTTAGACTTGGCACTGAAAG+AGG 0.521855 4_1:-59437890 Msa0560200:CDS
GGCATTATCCTAGTGGTCCA+TGG 0.523451 4_1:-59440352 Msa0560200:CDS
AATGGAAACATTGATTTGGA+GGG 0.525358 4_1:-59439776 Msa0560200:CDS
GTGGATGGAGACAAAGAAGT+TGG 0.527108 4_1:-59438021 Msa0560200:CDS
TTATTACCTGGCTCAACTTG+AGG 0.528630 4_1:-59438907 Msa0560200:intron
ATCAAGGATGCAATCCTCTC+CGG 0.530997 4_1:-59437335 Msa0560200:three_prime_UTR
GACCGTAAACTTGTTGATGC+AGG 0.533803 4_1:+59437163 None:intergenic
ACGAACCATTTCCCCTTGAG+TGG 0.534805 4_1:-59438191 Msa0560200:CDS
CAATCCTTCCATGGACCACT+AGG 0.537614 4_1:+59440344 None:intergenic
TGAAAGAACTGTTCCACTCA+AGG 0.538486 4_1:+59438178 None:intergenic
TCCAAAAGTTTAAAATGTAG+TGG 0.541221 4_1:-59439937 Msa0560200:CDS
AATTTACCTCAAGTTGAGCC+AGG 0.543221 4_1:+59438901 None:intergenic
CTCTTACTACAATCCTTCCA+TGG 0.548386 4_1:+59440335 None:intergenic
GAAAGAACTGTTCCACTCAA+GGG 0.548578 4_1:+59438179 None:intergenic
TACAGCACAGATTTAGCAAG+TGG 0.555487 4_1:+59436979 None:intergenic
TCATGTGCGTTGTGCAGGAG+GGG 0.559520 4_1:-59439866 Msa0560200:CDS
CACTAGGATAATGCCACCTA+AGG 0.566980 4_1:+59440360 None:intergenic
ATTTAGTACAAGGCAGTGCA+AGG 0.570222 4_1:-59438296 Msa0560200:intron
GCAGCAGCGTATTTACAGAC+AGG 0.571396 4_1:-59438980 Msa0560200:CDS
AACGGCATCAGAAGAGGTCA+GGG 0.571583 4_1:-59437133 Msa0560200:three_prime_UTR
CAGCATTGAAAATGTTGGAG+AGG 0.575010 4_1:-59439818 Msa0560200:CDS
GCCCAATGAAGCCGAGAGCA+AGG 0.576647 4_1:+59438578 None:intergenic
TCGTTCATTTCCCCGTCATG+TGG 0.576675 4_1:-59437244 Msa0560200:three_prime_UTR
TTGTCCATGACACAGGTGGA+TGG 0.585226 4_1:-59438036 Msa0560200:intron
AAAGCGCCTAGGTAGTGGAC+TGG 0.586047 4_1:+59437103 None:intergenic
CCAAGATATAGCTCTTGCAC+CGG 0.593067 4_1:+59437316 None:intergenic
AAGCTTATACAGCCACATGA+CGG 0.594048 4_1:+59437232 None:intergenic
AAATTTAAATCAAAGCGCCT+AGG 0.595234 4_1:+59437092 None:intergenic
AGATGCTCACTCACAGTGAG+AGG 0.597204 4_1:+59439718 None:intergenic
ATGGTTCCAGTCCACTACCT+AGG 0.598519 4_1:-59437109 Msa0560200:three_prime_UTR
AAAGAACTGTTCCACTCAAG+GGG 0.598834 4_1:+59438180 None:intergenic
TGATAGCTCAACCGAAATGG+TGG 0.602707 4_1:+59438378 None:intergenic
AGTTTACGGTCAAGTGCTAA+CGG 0.603042 4_1:-59437151 Msa0560200:three_prime_UTR
TTATCCTAGTGGTCCATGGA+AGG 0.606592 4_1:-59440348 Msa0560200:CDS
CATCAGAAGAGGTCAGGGGA+TGG 0.606663 4_1:-59437128 Msa0560200:three_prime_UTR
AGATTGTGACAAATCTAGAG+TGG 0.607452 4_1:-59437197 Msa0560200:three_prime_UTR
AGTGCTAACGGCATCAGAAG+AGG 0.609124 4_1:-59437139 Msa0560200:three_prime_UTR
GCTTATACAGCCACATGACG+GGG 0.613132 4_1:+59437234 None:intergenic
TGTTGGAGAGGAAATTCAAG+AGG 0.625666 4_1:-59439806 Msa0560200:CDS
CAGGTTTCCTGCCTCAATAG+CGG 0.635356 4_1:+59438546 None:intergenic
GTTACTGTAGTAACCTTAGG+TGG 0.636341 4_1:-59440373 Msa0560200:CDS
TGGCACTGAAAGAGGTGCAG+AGG 0.639466 4_1:-59437882 Msa0560200:CDS
CAACAACAAAGATTCCTGTA+CGG 0.642984 4_1:+59438611 None:intergenic
GCACTCACAATACAAGTGAG+AGG 0.647555 4_1:+59437794 None:intergenic
CTTAGGTGGCATTATCCTAG+TGG 0.648549 4_1:-59440359 Msa0560200:CDS
ATATAGCTCTTGCACCGGAG+AGG 0.655073 4_1:+59437321 None:intergenic
AGCTATATCTTGGCTCTTGG+GGG 0.667084 4_1:-59437306 Msa0560200:three_prime_UTR
GATGCTCACTCACAGTGAGA+GGG 0.667259 4_1:+59439719 None:intergenic
TGAGAAACAATACTGAACGC+AGG 0.690292 4_1:+59438527 None:intergenic
ACGGCATCAGAAGAGGTCAG+GGG 0.723586 4_1:-59437132 Msa0560200:three_prime_UTR
GAGATGTTGTGAAGCCAACG+AGG 0.738146 4_1:+59438147 None:intergenic
CCAAATGCTGCAAAACACAG+AGG 0.746304 4_1:+59438342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTATAATATTTATTATTCA+TGG - chr4_1:59438948-59438967 Msa0560200:CDS 10.0%
!! ATATAGAAAAAACTATAAGA+AGG + chr4_1:59437173-59437192 None:intergenic 15.0%
!!! TAAATGCTATTTTGTTTTAT+TGG - chr4_1:59438252-59438271 Msa0560200:intron 15.0%
!!! TTATTTCTTATTTTTCTTTC+AGG - chr4_1:59439285-59439304 Msa0560200:intron 15.0%
!!! GTTCTTTTTATATTAAAACT+AGG - chr4_1:59439648-59439667 Msa0560200:intron 15.0%
!!! TGATTTAAATTTTGAATTGA+TGG - chr4_1:59440116-59440135 Msa0560200:intron 15.0%
!! TTACAAATTTGAATTGAAAT+TGG - chr4_1:59440264-59440283 Msa0560200:intron 15.0%
!! AATTTCTTACTAAAAAAAAC+AGG + chr4_1:59440375-59440394 None:intergenic 15.0%
!! AACTATAGAAGAAGATTAAA+TGG - chr4_1:59437073-59437092 Msa0560200:three_prime_UTR 20.0%
!! ATACATATAATATGTCATGT+TGG - chr4_1:59437213-59437232 Msa0560200:three_prime_UTR 20.0%
!!! ATACTGATAGTTTTAAATTG+CGG + chr4_1:59437746-59437765 None:intergenic 20.0%
!! TTTAACATTAAGATAGGAAA+AGG + chr4_1:59438025-59438044 None:intergenic 20.0%
!!! AATGTATTGGTATAACAAAT+AGG - chr4_1:59438186-59438205 Msa0560200:CDS 20.0%
!!! TTTTTTCATTTTGGAATCAA+TGG - chr4_1:59438343-59438362 Msa0560200:CDS 20.0%
!! AATATTATAACTCTGTAGTT+AGG + chr4_1:59438939-59438958 None:intergenic 20.0%
!!! TAATCTTTTGGTTATGAATA+TGG - chr4_1:59439499-59439518 Msa0560200:intron 20.0%
!! AAAGGAAATTATATGAAGTA+AGG - chr4_1:59439824-59439843 Msa0560200:CDS 20.0%
!! CAAATTTGTAATGTTTCTTA+GGG + chr4_1:59440255-59440274 None:intergenic 20.0%
!! TCAAATTTGTAATGTTTCTT+AGG + chr4_1:59440256-59440275 None:intergenic 20.0%
!! TCCAAAAGTTTAAAATGTAG+TGG - chr4_1:59437260-59437279 Msa0560200:three_prime_UTR 25.0%
!! ACCACTACATTTTAAACTTT+TGG + chr4_1:59437264-59437283 None:intergenic 25.0%
! AATTCAAGAGGATATTTCAA+TGG - chr4_1:59437403-59437422 Msa0560200:exon 25.0%
!! TTTCAATGGAAACATTGATT+TGG - chr4_1:59437417-59437436 Msa0560200:CDS 25.0%
! ATACCCTAATTGAATGAAAT+TGG - chr4_1:59437821-59437840 Msa0560200:CDS 25.0%
! TACCCTAATTGAATGAAATT+GGG - chr4_1:59437822-59437841 Msa0560200:CDS 25.0%
!! TTTTATTGACATGTAGATGT+AGG - chr4_1:59437859-59437878 Msa0560200:CDS 25.0%
! TTTATTGACATGTAGATGTA+GGG - chr4_1:59437860-59437879 Msa0560200:CDS 25.0%
! AACGAGTTTAACATTAAGAT+AGG + chr4_1:59438031-59438050 None:intergenic 25.0%
! CCTATCATGCAATAAAAAAT+TGG + chr4_1:59438084-59438103 None:intergenic 25.0%
!!! CCAATTTTTTATTGCATGAT+AGG - chr4_1:59438081-59438100 Msa0560200:intron 25.0%
! TAGACTCTCTCATAAATATA+GGG + chr4_1:59438166-59438185 None:intergenic 25.0%
! TTAGACTCTCTCATAAATAT+AGG + chr4_1:59438167-59438186 None:intergenic 25.0%
! TATTGGTATAACAAATAGGT+AGG - chr4_1:59438190-59438209 Msa0560200:CDS 25.0%
!!! TGCTAGCTATTTTTTCATTT+TGG - chr4_1:59438334-59438353 Msa0560200:CDS 25.0%
! TTTATTCAAACATGTACAGA+AGG + chr4_1:59438520-59438539 None:intergenic 25.0%
! TACTAAATAAAAAGCAGTAG+TGG + chr4_1:59438889-59438908 None:intergenic 25.0%
!!! ACTGCTTTTTATTTAGTACA+AGG - chr4_1:59438891-59438910 Msa0560200:intron 25.0%
! TAATTGGAGTTCAGAAATAA+CGG + chr4_1:59439108-59439127 None:intergenic 25.0%
! AAGATTAAATCATAAGTGCA+TGG + chr4_1:59439486-59439505 None:intergenic 25.0%
!! GCACTTATGATTTAATCTTT+TGG - chr4_1:59439487-59439506 Msa0560200:intron 25.0%
! TGCATAGTTGATTAATAAGA+TGG - chr4_1:59440139-59440158 Msa0560200:intron 25.0%
!! GGATTTAATACTTTGTTGTA+TGG - chr4_1:59440285-59440304 Msa0560200:intron 25.0%
ATTGTTACTGTAGTAACCTT+AGG - chr4_1:59436821-59436840 Msa0560200:three_prime_UTR 30.0%
TAATCACTTGTATCTACGAT+TGG - chr4_1:59437000-59437019 Msa0560200:three_prime_UTR 30.0%
!! TGTCATGTTGGTTAATTTTC+AGG - chr4_1:59437225-59437244 Msa0560200:three_prime_UTR 30.0%
! TTTAAAATGTAGTGGTAGTG+TGG - chr4_1:59437268-59437287 Msa0560200:three_prime_UTR 30.0%
TTTGAACTTGAAATCTCCTA+TGG + chr4_1:59437304-59437323 None:intergenic 30.0%
!! AATGGAAACATTGATTTGGA+GGG - chr4_1:59437421-59437440 Msa0560200:CDS 30.0%
GTGATTGTTAAATTCAGCAT+AGG - chr4_1:59437522-59437541 Msa0560200:intron 30.0%
GTATGAAATAAGGATCAAGA+TGG - chr4_1:59437561-59437580 Msa0560200:intron 30.0%
AGCATGAAACCTTTATATTG+TGG - chr4_1:59437693-59437712 Msa0560200:intron 30.0%
TCACATTTCTAAGTTTGAGT+TGG + chr4_1:59437784-59437803 None:intergenic 30.0%
ACCCTAATTGAATGAAATTG+GGG - chr4_1:59437823-59437842 Msa0560200:CDS 30.0%
TTATTGACATGTAGATGTAG+GGG - chr4_1:59437861-59437880 Msa0560200:CDS 30.0%
! TTTTCATTACCTTCGGATTA+AGG - chr4_1:59437919-59437938 Msa0560200:intron 30.0%
! TCCTTCTACATAACTTTTCT+TGG + chr4_1:59437945-59437964 None:intergenic 30.0%
AGAAAAGTTATGTAGAAGGA+AGG - chr4_1:59437945-59437964 Msa0560200:intron 30.0%
! AAGGAAGGAACTGTATTTTA+AGG - chr4_1:59437960-59437979 Msa0560200:intron 30.0%
AAAGGTGGGATAAATAATTG+AGG + chr4_1:59438007-59438026 None:intergenic 30.0%
ACATTAAGATAGGAAAAGGT+GGG + chr4_1:59438021-59438040 None:intergenic 30.0%
AACATTAAGATAGGAAAAGG+TGG + chr4_1:59438022-59438041 None:intergenic 30.0%
CAAAAACAAAACTGTAAGAC+TGG + chr4_1:59438132-59438151 None:intergenic 30.0%
ATGAGAGAGTCTAAATGTAT+TGG - chr4_1:59438173-59438192 Msa0560200:CDS 30.0%
AAAGGAATCAGTTGTAAACT+TGG - chr4_1:59438441-59438460 Msa0560200:intron 30.0%
TATTTGCGGCTATATATATC+AGG - chr4_1:59438703-59438722 Msa0560200:intron 30.0%
AACAAGATTATGATATCAGC+AGG + chr4_1:59438737-59438756 None:intergenic 30.0%
GATGAAAATGACTGCAAAAA+AGG + chr4_1:59439080-59439099 None:intergenic 30.0%
!! TTTTTGCAGTCATTTTCATC+AGG - chr4_1:59439080-59439099 Msa0560200:intron 30.0%
GTGTCATGGACAAAATAAAA+AGG + chr4_1:59439154-59439173 None:intergenic 30.0%
!!! TTTTATTTTGTCCATGACAC+AGG - chr4_1:59439154-59439173 Msa0560200:intron 30.0%
!!! TTTTTCTTTCAGGTTAGACT+TGG - chr4_1:59439295-59439314 Msa0560200:intron 30.0%
! GGACAAAGATAAGATTTTCA+TGG - chr4_1:59439684-59439703 Msa0560200:intron 30.0%
! AAGTAAGGATTTTGTTCAAG+AGG - chr4_1:59439839-59439858 Msa0560200:CDS 30.0%
! AAATTTAAATCAAAGCGCCT+AGG + chr4_1:59440108-59440127 None:intergenic 30.0%
AGGATTGTAGTAAGAGGATA+TGG - chr4_1:59436869-59436888 Msa0560200:three_prime_UTR 35.0%
ACTCAGTTTATCTACTTCAC+TGG - chr4_1:59436959-59436978 Msa0560200:three_prime_UTR 35.0%
TATAAGAAGGAACTTGCCTT+TGG + chr4_1:59437160-59437179 None:intergenic 35.0%
!! GTGTGGAAAAAGTATTCCAT+AGG - chr4_1:59437285-59437304 Msa0560200:three_prime_UTR 35.0%
!! GGAGATTTCAAGTTCAAAGA+AGG - chr4_1:59437306-59437325 Msa0560200:three_prime_UTR 35.0%
! AGTTCCAGCATTGAAAATGT+TGG - chr4_1:59437374-59437393 Msa0560200:three_prime_UTR 35.0%
!! CAATGGAAACATTGATTTGG+AGG - chr4_1:59437420-59437439 Msa0560200:CDS 35.0%
! ACCTATTTACTCTGTTGCTT+TGG - chr4_1:59437454-59437473 Msa0560200:CDS 35.0%
ACCAAAGCAACAGAGTAAAT+AGG + chr4_1:59437458-59437477 None:intergenic 35.0%
CCCCCAATTTCATTCAATTA+GGG + chr4_1:59437827-59437846 None:intergenic 35.0%
CCCTAATTGAATGAAATTGG+GGG - chr4_1:59437824-59437843 Msa0560200:CDS 35.0%
ACCCCCAATTTCATTCAATT+AGG + chr4_1:59437828-59437847 None:intergenic 35.0%
! CCTGAACTTTTCATTACCTT+CGG - chr4_1:59437912-59437931 Msa0560200:intron 35.0%
GCCAAGAAAAGTTATGTAGA+AGG - chr4_1:59437941-59437960 Msa0560200:intron 35.0%
AATGTTAAACTCGTTGCCAT+AGG - chr4_1:59438036-59438055 Msa0560200:intron 35.0%
CTAGTTCATGTACATACCTA+TGG + chr4_1:59438055-59438074 None:intergenic 35.0%
!! CTTCAGTTCTTGTTATTACC+TGG - chr4_1:59438278-59438297 Msa0560200:intron 35.0%
TCTGCAGTTTCATATGGTTA+TGG - chr4_1:59438373-59438392 Msa0560200:CDS 35.0%
!! GACGTTTATGATTTTGACAC+TGG - chr4_1:59438403-59438422 Msa0560200:intron 35.0%
TGGAGTTGACAAGAACAAAA+AGG - chr4_1:59438423-59438442 Msa0560200:intron 35.0%
GAATCAGTTGTAAACTTGGT+TGG - chr4_1:59438445-59438464 Msa0560200:intron 35.0%
TTTCTTCCTCGTGTTGAATT+TGG - chr4_1:59438559-59438578 Msa0560200:CDS 35.0%
CAACAACAAAGATTCCTGTA+CGG + chr4_1:59438589-59438608 None:intergenic 35.0%
CTCACTTGTGCAATTATTTG+CGG - chr4_1:59438689-59438708 Msa0560200:intron 35.0%
TAAAAAGCAGTAGTGGCAAA+AGG + chr4_1:59438882-59438901 None:intergenic 35.0%
!! CTTGAAGGTACTCTTGTAAT+TGG + chr4_1:59439124-59439143 None:intergenic 35.0%
!! TTACAAGAGTACCTTCAAGT+AGG - chr4_1:59439125-59439144 Msa0560200:intron 35.0%
TAAAAAGGTCACCTACTTGA+AGG + chr4_1:59439139-59439158 None:intergenic 35.0%
AGTTGGAAAATTATCGCCTT+TGG - chr4_1:59439193-59439212 Msa0560200:intron 35.0%
TAGCAAAGTGTATCTACCAA+AGG + chr4_1:59439212-59439231 None:intergenic 35.0%
!! TATGCTCTTTTGGTTGCTTT+TGG - chr4_1:59439364-59439383 Msa0560200:intron 35.0%
CTTGGACAAATTTAACTACC+AGG + chr4_1:59439566-59439585 None:intergenic 35.0%
ATTTGTCCAAGACAATCACA+AGG - chr4_1:59439575-59439594 Msa0560200:intron 35.0%
TACCTAAACGCTATTCTCAT+TGG + chr4_1:59439804-59439823 None:intergenic 35.0%
GAGAATAGCGTTTAGGTAAA+AGG - chr4_1:59439806-59439825 Msa0560200:CDS 35.0%
! GATTTTGTTCAAGAGGATCA+AGG - chr4_1:59439846-59439865 Msa0560200:CDS 35.0%
AGATTGTGACAAATCTAGAG+TGG - chr4_1:59440000-59440019 Msa0560200:intron 35.0%
GTTACTGTAGTAACCTTAGG+TGG - chr4_1:59436824-59436843 Msa0560200:three_prime_UTR 40.0%
CTCTTACTACAATCCTTCCA+TGG + chr4_1:59436865-59436884 None:intergenic 40.0%
CATGGAAGGATTGTAGTAAG+AGG - chr4_1:59436863-59436882 Msa0560200:three_prime_UTR 40.0%
TACTTTGTATGTGCTTCCAC+CGG - chr4_1:59436930-59436949 Msa0560200:three_prime_UTR 40.0%
AGATAAACTGAGTGAAGTCC+CGG + chr4_1:59436952-59436971 None:intergenic 40.0%
AAGAGGTGGTGATTAAGGAA+GGG + chr4_1:59437131-59437150 None:intergenic 40.0%
AGTAGAAGAGGTGGTGATTA+AGG + chr4_1:59437136-59437155 None:intergenic 40.0%
! CTCTCCAACATTTTCAATGC+TGG + chr4_1:59437381-59437400 None:intergenic 40.0%
! CAGCATTGAAAATGTTGGAG+AGG - chr4_1:59437379-59437398 Msa0560200:three_prime_UTR 40.0%
TGTTGGAGAGGAAATTCAAG+AGG - chr4_1:59437391-59437410 Msa0560200:three_prime_UTR 40.0%
GCATAGGTTTATGTGATGCT+CGG - chr4_1:59437538-59437557 Msa0560200:intron 40.0%
CATAGGTTTATGTGATGCTC+GGG - chr4_1:59437539-59437558 Msa0560200:intron 40.0%
TGATGCTCGGGTATGAAATA+AGG - chr4_1:59437551-59437570 Msa0560200:intron 40.0%
TGCAGCTGTAATTACAGTTC+TGG - chr4_1:59437667-59437686 Msa0560200:intron 40.0%
ACATGTAGATGTAGGGGATA+AGG - chr4_1:59437867-59437886 Msa0560200:CDS 40.0%
CCGAAGGTAATGAAAAGTTC+AGG + chr4_1:59437915-59437934 None:intergenic 40.0%
!!! TTTTCTTGGCCTTAATCCGA+AGG + chr4_1:59437931-59437950 None:intergenic 40.0%
TTATTACCTGGCTCAACTTG+AGG - chr4_1:59438290-59438309 Msa0560200:intron 40.0%
!! AATTTACCTCAAGTTGAGCC+AGG + chr4_1:59438299-59438318 None:intergenic 40.0%
AGCAACTCTGCAGTTTCATA+TGG - chr4_1:59438367-59438386 Msa0560200:CDS 40.0%
CAGTTGTAAACTTGGTTGGA+AGG - chr4_1:59438449-59438468 Msa0560200:intron 40.0%
TTGAATTTGGAAAGCCGTAC+AGG - chr4_1:59438572-59438591 Msa0560200:CDS 40.0%
TGAGAAACAATACTGAACGC+AGG + chr4_1:59438673-59438692 None:intergenic 40.0%
ATTTAGTACAAGGCAGTGCA+AGG - chr4_1:59438901-59438920 Msa0560200:intron 40.0%
AAAGAACTGTTCCACTCAAG+GGG + chr4_1:59439020-59439039 None:intergenic 40.0%
GAAAGAACTGTTCCACTCAA+GGG + chr4_1:59439021-59439040 None:intergenic 40.0%
TGAAAGAACTGTTCCACTCA+AGG + chr4_1:59439022-59439041 None:intergenic 40.0%
! TATTTTGTCCATGACACAGG+TGG - chr4_1:59439157-59439176 Msa0560200:intron 40.0%
! TCGCGAGTATAGTTGCTATT+TGG - chr4_1:59439459-59439478 Msa0560200:intron 40.0%
TCGGTAATGTCAATGCACAA+AGG + chr4_1:59439536-59439555 None:intergenic 40.0%
! TGTGCATTGACATTACCGAT+CGG - chr4_1:59439537-59439556 Msa0560200:intron 40.0%
TTAACTACCAGGTTTCCGAT+CGG + chr4_1:59439555-59439574 None:intergenic 40.0%
! AAACTAGGTTGTGTTGTTGC+AGG - chr4_1:59439663-59439682 Msa0560200:intron 40.0%
!! CAACCTCACACAAAAGTACT+TGG + chr4_1:59439710-59439729 None:intergenic 40.0%
!!! ACTGGCTTTTGGATTGGTAT+TGG - chr4_1:59439750-59439769 Msa0560200:CDS 40.0%
!! TGGATTGGTATTGGCTAGAA+TGG - chr4_1:59439759-59439778 Msa0560200:CDS 40.0%
CTCCAATGAGAATAGCGTTT+AGG - chr4_1:59439799-59439818 Msa0560200:CDS 40.0%
! AAGAGCTATATCTTGGCTCT+TGG - chr4_1:59439888-59439907 Msa0560200:CDS 40.0%
! AGAGCTATATCTTGGCTCTT+GGG - chr4_1:59439889-59439908 Msa0560200:CDS 40.0%
AAGCTTATACAGCCACATGA+CGG + chr4_1:59439968-59439987 None:intergenic 40.0%
TGCCTGCATCAACAAGTTTA+CGG - chr4_1:59440032-59440051 Msa0560200:intron 40.0%
AGTTTACGGTCAAGTGCTAA+CGG - chr4_1:59440046-59440065 Msa0560200:intron 40.0%
! AGATGGCAACATTTGCTGAT+AGG - chr4_1:59440156-59440175 Msa0560200:intron 40.0%
TACAGCACAGATTTAGCAAG+TGG + chr4_1:59440221-59440240 None:intergenic 40.0%
CACTAGGATAATGCCACCTA+AGG + chr4_1:59436840-59436859 None:intergenic 45.0%
CTTAGGTGGCATTATCCTAG+TGG - chr4_1:59436838-59436857 Msa0560200:three_prime_UTR 45.0%
TTATCCTAGTGGTCCATGGA+AGG - chr4_1:59436849-59436868 Msa0560200:three_prime_UTR 45.0%
ACTTTGTATGTGCTTCCACC+GGG - chr4_1:59436931-59436950 Msa0560200:three_prime_UTR 45.0%
ATATGTGAGGTTACAGCACG+TGG + chr4_1:59437102-59437121 None:intergenic 45.0%
GAAGAGGTGGTGATTAAGGA+AGG + chr4_1:59437132-59437151 None:intergenic 45.0%
ACCACCTCTTCTACTTCCAA+AGG - chr4_1:59437141-59437160 Msa0560200:three_prime_UTR 45.0%
! CTTGCCTTTGGAAGTAGAAG+AGG + chr4_1:59437148-59437167 None:intergenic 45.0%
GGCTTGGAGCCACAATATAA+AGG + chr4_1:59437705-59437724 None:intergenic 45.0%
TTAAACCGCACTTGAAGGCT+TGG + chr4_1:59437721-59437740 None:intergenic 45.0%
ATGAAATTGGGGGTCAGAGT+AGG - chr4_1:59437834-59437853 Msa0560200:CDS 45.0%
GGCTTTCCAAATTCAACACG+AGG + chr4_1:59438568-59438587 None:intergenic 45.0%
GCTTACTTATGCCTTGCTCT+CGG - chr4_1:59438608-59438627 Msa0560200:CDS 45.0%
TGCTGTAGTGTCCACCATTT+CGG - chr4_1:59438808-59438827 Msa0560200:intron 45.0%
TGATAGCTCAACCGAAATGG+TGG + chr4_1:59438822-59438841 None:intergenic 45.0%
ACCATTTCGGTTGAGCTATC+AGG - chr4_1:59438821-59438840 Msa0560200:intron 45.0%
CCATTTCGGTTGAGCTATCA+GGG - chr4_1:59438822-59438841 Msa0560200:intron 45.0%
CCAAATGCTGCAAAACACAG+AGG + chr4_1:59438858-59438877 None:intergenic 45.0%
! CCTCTGTGTTTTGCAGCATT+TGG - chr4_1:59438855-59438874 Msa0560200:intron 45.0%
CTTTCAGCATCAATCCTCGT+TGG - chr4_1:59439036-59439055 Msa0560200:intron 45.0%
GTGGATGGAGACAAAGAAGT+TGG - chr4_1:59439176-59439195 Msa0560200:intron 45.0%
! GTTAGACTTGGCACTGAAAG+AGG - chr4_1:59439307-59439326 Msa0560200:intron 45.0%
! CTTGTCGCTCTATGCTCTTT+TGG - chr4_1:59439354-59439373 Msa0560200:intron 45.0%
!!! GGTTGCTTTTGGTCTAAGCA+AGG - chr4_1:59439375-59439394 Msa0560200:intron 45.0%
GCACTCACAATACAAGTGAG+AGG + chr4_1:59439406-59439425 None:intergenic 45.0%
GCAACTATACTCGCGAAGAA+AGG + chr4_1:59439455-59439474 None:intergenic 45.0%
CACTTGCCTTGTGATTGTCT+TGG + chr4_1:59439584-59439603 None:intergenic 45.0%
! TGGCCAAGTACTTTTGTGTG+AGG - chr4_1:59439704-59439723 Msa0560200:intron 45.0%
! GTGAGGTTGCATGCTTTGTT+TGG - chr4_1:59439721-59439740 Msa0560200:intron 45.0%
ATCAAGGATGCAATCCTCTC+CGG - chr4_1:59439862-59439881 Msa0560200:CDS 45.0%
CCAAGATATAGCTCTTGCAC+CGG + chr4_1:59439884-59439903 None:intergenic 45.0%
! GAGCTATATCTTGGCTCTTG+GGG - chr4_1:59439890-59439909 Msa0560200:CDS 45.0%
! AGCTATATCTTGGCTCTTGG+GGG - chr4_1:59439891-59439910 Msa0560200:CDS 45.0%
AGCTTATACAGCCACATGAC+GGG + chr4_1:59439967-59439986 None:intergenic 45.0%
!! GACCGTAAACTTGTTGATGC+AGG + chr4_1:59440037-59440056 None:intergenic 45.0%
! AAATCAAAGCGCCTAGGTAG+TGG + chr4_1:59440102-59440121 None:intergenic 45.0%
GGCATTATCCTAGTGGTCCA+TGG - chr4_1:59436845-59436864 Msa0560200:three_prime_UTR 50.0%
CAATCCTTCCATGGACCACT+AGG + chr4_1:59436856-59436875 None:intergenic 50.0%
TAAACTGAGTGAAGTCCCGG+TGG + chr4_1:59436949-59436968 None:intergenic 50.0%
! GGAAGGGAGAAGCATATGTG+AGG + chr4_1:59437115-59437134 None:intergenic 50.0%
! GCCTTTGGAAGTAGAAGAGG+TGG + chr4_1:59437145-59437164 None:intergenic 50.0%
ATCATGTGCGTTGTGCAGGA+GGG - chr4_1:59437330-59437349 Msa0560200:three_prime_UTR 50.0%
GATGCTCACTCACAGTGAGA+GGG + chr4_1:59437481-59437500 None:intergenic 50.0%
AGATGCTCACTCACAGTGAG+AGG + chr4_1:59437482-59437501 None:intergenic 50.0%
CGGTCTTAAACCGCACTTGA+AGG + chr4_1:59437726-59437745 None:intergenic 50.0%
GCAGCAGCGTATTTACAGAC+AGG - chr4_1:59438217-59438236 Msa0560200:intron 50.0%
CAGGTTTCCTGCCTCAATAG+CGG + chr4_1:59438654-59438673 None:intergenic 50.0%
CCCTGATAGCTCAACCGAAA+TGG + chr4_1:59438825-59438844 None:intergenic 50.0%
ACGAACCATTTCCCCTTGAG+TGG - chr4_1:59439006-59439025 Msa0560200:intron 50.0%
CTGTTCCACTCAAGGGGAAA+TGG + chr4_1:59439014-59439033 None:intergenic 50.0%
GAGATGTTGTGAAGCCAACG+AGG + chr4_1:59439053-59439072 None:intergenic 50.0%
TTGTCCATGACACAGGTGGA+TGG - chr4_1:59439161-59439180 Msa0560200:intron 50.0%
GACATTACCGATCGGAAACC+TGG - chr4_1:59439545-59439564 Msa0560200:intron 50.0%
!! TGCTTTGTTTGGTGCTGCAC+TGG - chr4_1:59439732-59439751 Msa0560200:CDS 50.0%
!!! TTTGGTGCTGCACTGGCTTT+TGG - chr4_1:59439739-59439758 Msa0560200:CDS 50.0%
!!! TGCTGCACTGGCTTTTGGAT+TGG - chr4_1:59439744-59439763 Msa0560200:CDS 50.0%
ATATAGCTCTTGCACCGGAG+AGG + chr4_1:59439879-59439898 None:intergenic 50.0%
CCGGTGCAAGAGCTATATCT+TGG - chr4_1:59439881-59439900 Msa0560200:CDS 50.0%
TCGTTCATTTCCCCGTCATG+TGG - chr4_1:59439953-59439972 Msa0560200:CDS 50.0%
GCTTATACAGCCACATGACG+GGG + chr4_1:59439966-59439985 None:intergenic 50.0%
AGTGCTAACGGCATCAGAAG+AGG - chr4_1:59440058-59440077 Msa0560200:intron 50.0%
TAACGGCATCAGAAGAGGTC+AGG - chr4_1:59440063-59440082 Msa0560200:intron 50.0%
AACGGCATCAGAAGAGGTCA+GGG - chr4_1:59440064-59440083 Msa0560200:intron 50.0%
ATGGTTCCAGTCCACTACCT+AGG - chr4_1:59440088-59440107 Msa0560200:intron 50.0%
AGGCATCATGTGCGTTGTGC+AGG - chr4_1:59437326-59437345 Msa0560200:three_prime_UTR 55.0%
CATCATGTGCGTTGTGCAGG+AGG - chr4_1:59437329-59437348 Msa0560200:three_prime_UTR 55.0%
TCATGTGCGTTGTGCAGGAG+GGG - chr4_1:59437331-59437350 Msa0560200:three_prime_UTR 55.0%
TTGTGCAGGAGGGGCTGAAT+TGG - chr4_1:59437340-59437359 Msa0560200:three_prime_UTR 55.0%
TGGCTCCAAGCCTTCAAGTG+CGG - chr4_1:59437713-59437732 Msa0560200:intron 55.0%
TGCCTTGCTCTCGGCTTCAT+TGG - chr4_1:59438617-59438636 Msa0560200:intron 55.0%
GCCTTGCTCTCGGCTTCATT+GGG - chr4_1:59438618-59438637 Msa0560200:intron 55.0%
TCGGCTTCATTGGGCTGACT+TGG - chr4_1:59438627-59438646 Msa0560200:intron 55.0%
! CGGCTTCATTGGGCTGACTT+GGG - chr4_1:59438628-59438647 Msa0560200:intron 55.0%
TCGGTTGAGCTATCAGGGAC+TGG - chr4_1:59438827-59438846 Msa0560200:intron 55.0%
CGGTTGAGCTATCAGGGACT+GGG - chr4_1:59438828-59438847 Msa0560200:intron 55.0%
GTCTCCATCCACCTGTGTCA+TGG + chr4_1:59439168-59439187 None:intergenic 55.0%
! TGGCACTGAAAGAGGTGCAG+AGG - chr4_1:59439315-59439334 Msa0560200:intron 55.0%
ACGGCATCAGAAGAGGTCAG+GGG - chr4_1:59440065-59440084 Msa0560200:intron 55.0%
CATCAGAAGAGGTCAGGGGA+TGG - chr4_1:59440069-59440088 Msa0560200:intron 55.0%
!! AAAGCGCCTAGGTAGTGGAC+TGG + chr4_1:59440097-59440116 None:intergenic 55.0%
GCCCAATGAAGCCGAGAGCA+AGG + chr4_1:59438622-59438641 None:intergenic 60.0%
!! GCTGACTTGGGCCGCTATTG+AGG - chr4_1:59438640-59438659 Msa0560200:intron 60.0%
ACTTGGGCCGCTATTGAGGC+AGG - chr4_1:59438644-59438663 Msa0560200:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 59436814 59440405 59436814 ID=Msa0560200;Name=Msa0560200
chr4_1 mRNA 59436814 59440405 59436814 ID=Msa0560200-mRNA-1;Parent=Msa0560200;Name=Msa0560200-mRNA-1;_AED=0.22;_eAED=0.23;_QI=0|0.77|0.9|1|1|1|10|598|371
chr4_1 exon 59436814 59437534 59436814 ID=Msa0560200-mRNA-1:exon:18386;Parent=Msa0560200-mRNA-1
chr4_1 exon 59437802 59437912 59437802 ID=Msa0560200-mRNA-1:exon:18385;Parent=Msa0560200-mRNA-1
chr4_1 exon 59438005 59438043 59438005 ID=Msa0560200-mRNA-1:exon:18384;Parent=Msa0560200-mRNA-1
chr4_1 exon 59438118 59438220 59438118 ID=Msa0560200-mRNA-1:exon:18383;Parent=Msa0560200-mRNA-1
chr4_1 exon 59438297 59438403 59438297 ID=Msa0560200-mRNA-1:exon:18382;Parent=Msa0560200-mRNA-1
chr4_1 exon 59438495 59438633 59438495 ID=Msa0560200-mRNA-1:exon:18381;Parent=Msa0560200-mRNA-1
chr4_1 exon 59438749 59438820 59438749 ID=Msa0560200-mRNA-1:exon:18380;Parent=Msa0560200-mRNA-1
chr4_1 exon 59438908 59439011 59438908 ID=Msa0560200-mRNA-1:exon:18379;Parent=Msa0560200-mRNA-1
chr4_1 exon 59439732 59439972 59439732 ID=Msa0560200-mRNA-1:exon:18378;Parent=Msa0560200-mRNA-1
chr4_1 exon 59440329 59440405 59440329 ID=Msa0560200-mRNA-1:exon:18377;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59440329 59440405 59440329 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59439732 59439972 59439732 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59438908 59439011 59438908 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59438749 59438820 59438749 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59438495 59438633 59438495 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59438297 59438403 59438297 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59438118 59438220 59438118 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59438005 59438043 59438005 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59437802 59437912 59437802 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 CDS 59437412 59437534 59437412 ID=Msa0560200-mRNA-1:cds;Parent=Msa0560200-mRNA-1
chr4_1 three_prime_UTR 59436814 59437411 59436814 ID=Msa0560200-mRNA-1:three_prime_utr;Parent=Msa0560200-mRNA-1
Gene Sequence

>Msa0560200

ATGAGACATTGTTACTGTAGTAACCTTAGGTGGCATTATCCTAGTGGTCCATGGAAGGATTGTAGTAAGAGGATATGGTGTCATGTAGTTTCCAAAAGTTTAAAATGTAGTGGTAGTGTGGAAAAAGTATTCCATAGGAGATTTCAAGTTCAAAGAAGGCATCATGTGCGTTGTGCAGGAGGGGCTGAATTGGCTTCTTCTTCTAGTTCCAGCATTGAAAATGTTGGAGAGGAAATTCAAGAGGATATTTCAATGGAAACATTGATTTGGAGGGCTATCAAGTTACCTATTTACTCTGTTGCTTTGGTCCCTCTCACTGTAGGCAGTGCAGCAGCGTATTTACAGACAGGCATCTTCACAGCTAAATGCTATTTTGTTTTATTGGCTTCTTCAGTTCTTGTTATTACCTGGCTCAACTTGAGCAATGACGTTTATGATTTTGACACTGGAGTTGACAAGAACAAAAAGGAATCAGTTGTAAACTTGGTTGGAAGCCGTACAGGAATCTTTGTTGTTGCTTACTTATGCCTTGCTCTCGGCTTCATTGGGCTGACTTGGGCCGCTATTGAGGCAGGAAACCTGCGTTCAGTATTGTTTCTCACTTGTGCAATTATTTGCGGCTATATATATCAGTGTCCACCATTTCGGTTGAGCTATCAGGGACTGGGAGAGCCTCTGTGTTTTGCAGCATTTGGTCCTTTTGCCACTACTGCTTTTTATTTAGTACAAGGCAGTGCAAGTAGCGTGACGAACCATTTCCCCTTGAGTGGAACAGTTCTTTCAGCATCAATCCTCGTTGGCTTCACAACATCTCTTATCCTTTTTTGCAGTCATTTTCATCAGGTGGATGGAGACAAAGAAGTTGGAAAATTATCGCCTTTGGTTAGACTTGGCACTGAAAGAGGTGCAGAGGTAGTGAAAGTAGCAGTCTTGTCGCTCTATGCTCTTTTGGTTGCTTTTGGTCTAAGCAAGGCACTTCCTCTCACTTGTATTGACAAAGATAAGATTTTCATGGCCAAGTACTTTTGTGTGAGGTTGCATGCTTTGTTTGGTGCTGCACTGGCTTTTGGATTGGTATTGGCTAGAATGGTTAACAGAAAGCTACTACTCCAATGA

Protein sequence

>Msa0560200

MRHCYCSNLRWHYPSGPWKDCSKRIWCHVVSKSLKCSGSVEKVFHRRFQVQRRHHVRCAGGAELASSSSSSIENVGEEIQEDISMETLIWRAIKLPIYSVALVPLTVGSAAAYLQTGIFTAKCYFVLLASSVLVITWLNLSNDVYDFDTGVDKNKKESVVNLVGSRTGIFVVAYLCLALGFIGLTWAAIEAGNLRSVLFLTCAIICGYIYQCPPFRLSYQGLGEPLCFAAFGPFATTAFYLVQGSASSVTNHFPLSGTVLSASILVGFTTSLILFCSHFHQVDGDKEVGKLSPLVRLGTERGAEVVKVAVLSLYALLVAFGLSKALPLTCIDKDKIFMAKYFCVRLHALFGAALAFGLVLARMVNRKLLLQ*