Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0949780 | sp|Q9SZ83|Y4967_ARATH | 54.745 | 411 | 135 | 2 | 1 | 411 | 1 | 360 | 8.11e-164 | 467 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0949780 | A0A072UJH2 | 84.709 | 412 | 12 | 2 | 1 | 412 | 1 | 361 | 0.0 | 701 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0949780 | 0.803731 | 3.030188e-49 | -8.615850e-47 |
| Msa0001540 | Msa0949780 | 0.830258 | 3.250634e-55 | -8.615850e-47 |
| Msa0009210 | Msa0949780 | 0.815880 | 7.369565e-52 | -8.615850e-47 |
| Msa0017760 | Msa0949780 | 0.800507 | 1.395109e-48 | -8.615850e-47 |
| Msa0024070 | Msa0949780 | 0.834180 | 3.479663e-56 | -8.615850e-47 |
| Msa0025830 | Msa0949780 | 0.800565 | 1.357659e-48 | -8.615850e-47 |
| Msa0028410 | Msa0949780 | 0.811836 | 5.734888e-51 | -8.615850e-47 |
| Msa0028450 | Msa0949780 | 0.813702 | 2.238830e-51 | -8.615850e-47 |
| Msa0032340 | Msa0949780 | -0.821269 | 4.416064e-53 | -8.615850e-47 |
| Msa0034320 | Msa0949780 | 0.803292 | 3.737948e-49 | -8.615850e-47 |
| Msa0044250 | Msa0949780 | 0.804935 | 1.701468e-49 | -8.615850e-47 |
| Msa0044380 | Msa0949780 | 0.804284 | 2.325240e-49 | -8.615850e-47 |
| Msa0047400 | Msa0949780 | 0.803565 | 3.280779e-49 | -8.615850e-47 |
| Msa0050400 | Msa0949780 | 0.804568 | 2.029227e-49 | -8.615850e-47 |
| Msa0056130 | Msa0949780 | 0.802599 | 5.197969e-49 | -8.615850e-47 |
| Msa0067820 | Msa0949780 | 0.816018 | 6.863471e-52 | -8.615850e-47 |
| Msa0072910 | Msa0949780 | 0.815926 | 7.198526e-52 | -8.615850e-47 |
| Msa0079520 | Msa0949780 | -0.808763 | 2.639005e-50 | -8.615850e-47 |
| Msa0079530 | Msa0949780 | 0.806246 | 9.028337e-50 | -8.615850e-47 |
| Msa0081300 | Msa0949780 | 0.807080 | 6.018570e-50 | -8.615850e-47 |
| Msa0090760 | Msa0949780 | 0.809872 | 1.526336e-50 | -8.615850e-47 |
| Msa0092750 | Msa0949780 | 0.816586 | 5.122993e-52 | -8.615850e-47 |
| Msa0093830 | Msa0949780 | 0.804483 | 2.114470e-49 | -8.615850e-47 |
| Msa0094700 | Msa0949780 | 0.805001 | 1.647641e-49 | -8.615850e-47 |
| Msa0097490 | Msa0949780 | 0.802554 | 5.308948e-49 | -8.615850e-47 |
| Msa0104190 | Msa0949780 | 0.801029 | 1.091821e-48 | -8.615850e-47 |
| Msa0109380 | Msa0949780 | 0.827227 | 1.757201e-54 | -8.615850e-47 |
| Msa0119860 | Msa0949780 | 0.829352 | 5.402245e-55 | -8.615850e-47 |
| Msa0606140 | Msa0949780 | 0.807173 | 5.753644e-50 | -8.615850e-47 |
| Msa0612730 | Msa0949780 | 0.817166 | 3.797049e-52 | -8.615850e-47 |
| Msa0626890 | Msa0949780 | 0.801949 | 7.073997e-49 | -8.615850e-47 |
| Msa0644610 | Msa0949780 | 0.808604 | 2.853723e-50 | -8.615850e-47 |
| Msa0645040 | Msa0949780 | 0.821412 | 4.094371e-53 | -8.615850e-47 |
| Msa0647710 | Msa0949780 | 0.807088 | 5.995877e-50 | -8.615850e-47 |
| Msa0648810 | Msa0949780 | 0.801761 | 7.730673e-49 | -8.615850e-47 |
| Msa0652360 | Msa0949780 | 0.805968 | 1.033188e-49 | -8.615850e-47 |
| Msa0653690 | Msa0949780 | 0.814832 | 1.260212e-51 | -8.615850e-47 |
| Msa0690530 | Msa0949780 | 0.815512 | 8.898744e-52 | -8.615850e-47 |
| Msa0691100 | Msa0949780 | 0.803421 | 3.513600e-49 | -8.615850e-47 |
| Msa0698880 | Msa0949780 | 0.807912 | 4.009634e-50 | -8.615850e-47 |
| Msa0702120 | Msa0949780 | 0.814317 | 1.638250e-51 | -8.615850e-47 |
| Msa0704570 | Msa0949780 | 0.814353 | 1.609134e-51 | -8.615850e-47 |
| Msa0706300 | Msa0949780 | 0.800498 | 1.401413e-48 | -8.615850e-47 |
| Msa0712070 | Msa0949780 | 0.818653 | 1.752454e-52 | -8.615850e-47 |
| Msa0718900 | Msa0949780 | 0.812340 | 4.452904e-51 | -8.615850e-47 |
| Msa0720380 | Msa0949780 | 0.816101 | 6.577177e-52 | -8.615850e-47 |
| Msa0726000 | Msa0949780 | 0.802200 | 6.280070e-49 | -8.615850e-47 |
| Msa0748890 | Msa0949780 | 0.829119 | 6.153562e-55 | -8.615850e-47 |
| Msa0752290 | Msa0949780 | 0.804921 | 1.712647e-49 | -8.615850e-47 |
| Msa0760080 | Msa0949780 | 0.809967 | 1.456505e-50 | -8.615850e-47 |
| Msa0760950 | Msa0949780 | 0.813168 | 2.933492e-51 | -8.615850e-47 |
| Msa0761930 | Msa0949780 | 0.818228 | 2.187067e-52 | -8.615850e-47 |
| Msa0788490 | Msa0949780 | 0.829481 | 5.025056e-55 | -8.615850e-47 |
| Msa0790180 | Msa0949780 | 0.812992 | 3.206995e-51 | -8.615850e-47 |
| Msa0790830 | Msa0949780 | 0.801873 | 7.331525e-49 | -8.615850e-47 |
| Msa0799490 | Msa0949780 | 0.804326 | 2.279335e-49 | -8.615850e-47 |
| Msa0814760 | Msa0949780 | 0.806027 | 1.004051e-49 | -8.615850e-47 |
| Msa0815340 | Msa0949780 | 0.807376 | 5.211092e-50 | -8.615850e-47 |
| Msa0833630 | Msa0949780 | 0.808945 | 2.413435e-50 | -8.615850e-47 |
| Msa0124070 | Msa0949780 | 0.820642 | 6.158177e-53 | -8.615850e-47 |
| Msa0131230 | Msa0949780 | 0.812828 | 3.483508e-51 | -8.615850e-47 |
| Msa0138800 | Msa0949780 | 0.830314 | 3.148601e-55 | -8.615850e-47 |
| Msa0147070 | Msa0949780 | 0.806580 | 7.675929e-50 | -8.615850e-47 |
| Msa0149070 | Msa0949780 | 0.822886 | 1.863423e-53 | -8.615850e-47 |
| Msa0151790 | Msa0949780 | 0.819269 | 1.269361e-52 | -8.615850e-47 |
| Msa0173610 | Msa0949780 | 0.803678 | 3.107798e-49 | -8.615850e-47 |
| Msa0181010 | Msa0949780 | 0.814925 | 1.202059e-51 | -8.615850e-47 |
| Msa0181380 | Msa0949780 | 0.826591 | 2.493972e-54 | -8.615850e-47 |
| Msa0183490 | Msa0949780 | 0.808847 | 2.533144e-50 | -8.615850e-47 |
| Msa0193000 | Msa0949780 | 0.815798 | 7.687841e-52 | -8.615850e-47 |
| Msa0196620 | Msa0949780 | 0.819660 | 1.033306e-52 | -8.615850e-47 |
| Msa0203330 | Msa0949780 | 0.808717 | 2.699904e-50 | -8.615850e-47 |
| Msa0206970 | Msa0949780 | 0.800915 | 1.151836e-48 | -8.615850e-47 |
| Msa0213020 | Msa0949780 | 0.822335 | 2.502641e-53 | -8.615850e-47 |
| Msa0214730 | Msa0949780 | 0.816581 | 5.136330e-52 | -8.615850e-47 |
| Msa0217300 | Msa0949780 | 0.804802 | 1.813290e-49 | -8.615850e-47 |
| Msa0224960 | Msa0949780 | 0.806191 | 9.274337e-50 | -8.615850e-47 |
| Msa0224980 | Msa0949780 | 0.830700 | 2.533364e-55 | -8.615850e-47 |
| Msa0225030 | Msa0949780 | 0.830489 | 2.852826e-55 | -8.615850e-47 |
| Msa0226800 | Msa0949780 | 0.819202 | 1.314593e-52 | -8.615850e-47 |
| Msa0234930 | Msa0949780 | 0.832765 | 7.843650e-56 | -8.615850e-47 |
| Msa0236350 | Msa0949780 | 0.814268 | 1.679728e-51 | -8.615850e-47 |
| Msa0365150 | Msa0949780 | 0.807422 | 5.095068e-50 | -8.615850e-47 |
| Msa0369770 | Msa0949780 | 0.807376 | 5.209169e-50 | -8.615850e-47 |
| Msa0370180 | Msa0949780 | 0.847010 | 1.515014e-59 | -8.615850e-47 |
| Msa0371050 | Msa0949780 | 0.834279 | 3.285343e-56 | -8.615850e-47 |
| Msa0376760 | Msa0949780 | 0.823513 | 1.330006e-53 | -8.615850e-47 |
| Msa0379090 | Msa0949780 | 0.811295 | 7.519317e-51 | -8.615850e-47 |
| Msa0380360 | Msa0949780 | 0.810439 | 1.151990e-50 | -8.615850e-47 |
| Msa0380440 | Msa0949780 | 0.810806 | 9.598551e-51 | -8.615850e-47 |
| Msa0383570 | Msa0949780 | 0.804061 | 2.587495e-49 | -8.615850e-47 |
| Msa0387120 | Msa0949780 | 0.804866 | 1.758417e-49 | -8.615850e-47 |
| Msa0401370 | Msa0949780 | 0.819379 | 1.198188e-52 | -8.615850e-47 |
| Msa0409300 | Msa0949780 | -0.804691 | 1.912576e-49 | -8.615850e-47 |
| Msa0417140 | Msa0949780 | 0.802221 | 6.218751e-49 | -8.615850e-47 |
| Msa0420100 | Msa0949780 | 0.805383 | 1.371094e-49 | -8.615850e-47 |
| Msa0426480 | Msa0949780 | 0.822437 | 2.369724e-53 | -8.615850e-47 |
| Msa0432390 | Msa0949780 | 0.820253 | 7.564440e-53 | -8.615850e-47 |
| Msa0436310 | Msa0949780 | 0.813695 | 2.247426e-51 | -8.615850e-47 |
| Msa0446480 | Msa0949780 | 0.816250 | 6.091089e-52 | -8.615850e-47 |
| Msa0463980 | Msa0949780 | 0.815956 | 7.085836e-52 | -8.615850e-47 |
| Msa0467890 | Msa0949780 | 0.801087 | 1.062438e-48 | -8.615850e-47 |
| Msa0471700 | Msa0949780 | 0.820777 | 5.732307e-53 | -8.615850e-47 |
| Msa0473010 | Msa0949780 | 0.802516 | 5.407288e-49 | -8.615850e-47 |
| Msa0475080 | Msa0949780 | 0.804089 | 2.553650e-49 | -8.615850e-47 |
| Msa0247310 | Msa0949780 | 0.801781 | 7.657160e-49 | -8.615850e-47 |
| Msa0251110 | Msa0949780 | 0.802916 | 4.471288e-49 | -8.615850e-47 |
| Msa0253410 | Msa0949780 | 0.809774 | 1.602447e-50 | -8.615850e-47 |
| Msa0255100 | Msa0949780 | 0.800273 | 1.557161e-48 | -8.615850e-47 |
| Msa0256070 | Msa0949780 | 0.834301 | 3.244951e-56 | -8.615850e-47 |
| Msa0256120 | Msa0949780 | 0.830777 | 2.426428e-55 | -8.615850e-47 |
| Msa0258380 | Msa0949780 | 0.826507 | 2.612286e-54 | -8.615850e-47 |
| Msa0258410 | Msa0949780 | 0.837571 | 4.804580e-57 | -8.615850e-47 |
| Msa0272680 | Msa0949780 | 0.802076 | 6.660991e-49 | -8.615850e-47 |
| Msa0273270 | Msa0949780 | 0.834429 | 3.012705e-56 | -8.615850e-47 |
| Msa0274870 | Msa0949780 | 0.817755 | 2.797219e-52 | -8.615850e-47 |
| Msa0280120 | Msa0949780 | 0.828413 | 9.115727e-55 | -8.615850e-47 |
| Msa0288300 | Msa0949780 | 0.809037 | 2.306361e-50 | -8.615850e-47 |
| Msa0288360 | Msa0949780 | 0.821784 | 3.358531e-53 | -8.615850e-47 |
| Msa0303950 | Msa0949780 | 0.813192 | 2.898594e-51 | -8.615850e-47 |
| Msa0307620 | Msa0949780 | 0.800502 | 1.398412e-48 | -8.615850e-47 |
| Msa0307750 | Msa0949780 | 0.829619 | 4.652249e-55 | -8.615850e-47 |
| Msa0321230 | Msa0949780 | 0.836802 | 7.556708e-57 | -8.615850e-47 |
| Msa0323790 | Msa0949780 | 0.809036 | 2.307056e-50 | -8.615850e-47 |
| Msa0327900 | Msa0949780 | 0.834127 | 3.587011e-56 | -8.615850e-47 |
| Msa0334780 | Msa0949780 | 0.807957 | 3.921068e-50 | -8.615850e-47 |
| Msa0335740 | Msa0949780 | 0.848724 | 5.107069e-60 | -8.615850e-47 |
| Msa0335860 | Msa0949780 | 0.813375 | 2.642772e-51 | -8.615850e-47 |
| Msa0340440 | Msa0949780 | 0.825194 | 5.353230e-54 | -8.615850e-47 |
| Msa0341710 | Msa0949780 | 0.803646 | 3.156661e-49 | -8.615850e-47 |
| Msa0352200 | Msa0949780 | 0.804609 | 1.989900e-49 | -8.615850e-47 |
| Msa0354490 | Msa0949780 | 0.838032 | 3.657682e-57 | -8.615850e-47 |
| Msa0484890 | Msa0949780 | 0.804822 | 1.795841e-49 | -8.615850e-47 |
| Msa0485350 | Msa0949780 | 0.828105 | 1.081779e-54 | -8.615850e-47 |
| Msa0497060 | Msa0949780 | 0.814322 | 1.634338e-51 | -8.615850e-47 |
| Msa0498320 | Msa0949780 | 0.806935 | 6.460096e-50 | -8.615850e-47 |
| Msa0508770 | Msa0949780 | 0.822880 | 1.868923e-53 | -8.615850e-47 |
| Msa0509530 | Msa0949780 | 0.808519 | 2.976138e-50 | -8.615850e-47 |
| Msa0510540 | Msa0949780 | 0.817790 | 2.746137e-52 | -8.615850e-47 |
| Msa0517190 | Msa0949780 | 0.801011 | 1.100922e-48 | -8.615850e-47 |
| Msa0553350 | Msa0949780 | 0.821052 | 4.956917e-53 | -8.615850e-47 |
| Msa0555940 | Msa0949780 | 0.808968 | 2.386582e-50 | -8.615850e-47 |
| Msa0562040 | Msa0949780 | 0.811240 | 7.729331e-51 | -8.615850e-47 |
| Msa0565930 | Msa0949780 | 0.815548 | 8.738908e-52 | -8.615850e-47 |
| Msa0567290 | Msa0949780 | 0.815082 | 1.109442e-51 | -8.615850e-47 |
| Msa0568170 | Msa0949780 | 0.805737 | 1.155432e-49 | -8.615850e-47 |
| Msa0583810 | Msa0949780 | 0.829064 | 6.342477e-55 | -8.615850e-47 |
| Msa0587060 | Msa0949780 | 0.801248 | 9.847236e-49 | -8.615850e-47 |
| Msa0851870 | Msa0949780 | 0.824173 | 9.315105e-54 | -8.615850e-47 |
| Msa0855560 | Msa0949780 | 0.820260 | 7.534648e-53 | -8.615850e-47 |
| Msa0866650 | Msa0949780 | 0.817009 | 4.117714e-52 | -8.615850e-47 |
| Msa0878330 | Msa0949780 | 0.829939 | 3.888150e-55 | -8.615850e-47 |
| Msa0893390 | Msa0949780 | 0.823642 | 1.241032e-53 | -8.615850e-47 |
| Msa0894530 | Msa0949780 | 0.807954 | 3.927840e-50 | -8.615850e-47 |
| Msa0898720 | Msa0949780 | 0.804108 | 2.530361e-49 | -8.615850e-47 |
| Msa0901140 | Msa0949780 | 0.837696 | 4.463298e-57 | -8.615850e-47 |
| Msa0909050 | Msa0949780 | 0.805635 | 1.213645e-49 | -8.615850e-47 |
| Msa0921200 | Msa0949780 | 0.812532 | 4.044574e-51 | -8.615850e-47 |
| Msa0926090 | Msa0949780 | 0.825994 | 3.459900e-54 | -8.615850e-47 |
| Msa0934800 | Msa0949780 | 0.807350 | 5.276891e-50 | -8.615850e-47 |
| Msa0949780 | Msa0959710 | 0.818847 | 1.583436e-52 | -8.615850e-47 |
| Msa0949780 | Msa0968010 | 0.831657 | 1.474032e-55 | -8.615850e-47 |
| Msa0949780 | Msa0985570 | 0.806297 | 8.806896e-50 | -8.615850e-47 |
| Msa0949780 | Msa1002980 | 0.804570 | 2.027019e-49 | -8.615850e-47 |
| Msa0949780 | Msa1011240 | 0.819390 | 1.191312e-52 | -8.615850e-47 |
| Msa0949780 | Msa1015020 | 0.804469 | 2.127789e-49 | -8.615850e-47 |
| Msa0949780 | Msa1017590 | 0.818898 | 1.541330e-52 | -8.615850e-47 |
| Msa0949780 | Msa1022310 | 0.822962 | 1.789111e-53 | -8.615850e-47 |
| Msa0949780 | Msa1030440 | 0.834558 | 2.796903e-56 | -8.615850e-47 |
| Msa0949780 | Msa1031650 | 0.803140 | 4.018630e-49 | -8.615850e-47 |
| Msa0949780 | Msa1032970 | 0.848854 | 4.699998e-60 | -8.615850e-47 |
| Msa0949780 | Msa1040010 | 0.810567 | 1.080990e-50 | -8.615850e-47 |
| Msa0949780 | Msa1040030 | 0.802404 | 5.702572e-49 | -8.615850e-47 |
| Msa0949780 | Msa1055490 | 0.800081 | 1.703290e-48 | -8.615850e-47 |
| Msa0949780 | Msa1056520 | 0.815391 | 9.471746e-52 | -8.615850e-47 |
| Msa0949780 | Msa1067430 | 0.800565 | 1.357673e-48 | -8.615850e-47 |
| Msa0949780 | Msa1069450 | 0.825162 | 5.446565e-54 | -8.615850e-47 |
| Msa0949780 | Msa1072430 | 0.811343 | 7.343249e-51 | -8.615850e-47 |
| Msa0949780 | Msa1088690 | 0.846442 | 2.166339e-59 | -8.615850e-47 |
| Msa0949780 | Msa1090230 | 0.815298 | 9.929378e-52 | -8.615850e-47 |
| Msa0949780 | Msa1106830 | 0.810703 | 1.010217e-50 | -8.615850e-47 |
| Msa0949780 | Msa1117690 | 0.831315 | 1.789872e-55 | -8.615850e-47 |
| Msa0949780 | Msa1118390 | 0.802261 | 6.101058e-49 | -8.615850e-47 |
| Msa0949780 | Msa1118870 | 0.800823 | 1.203120e-48 | -8.615850e-47 |
| Msa0949780 | Msa1121290 | 0.807393 | 5.167678e-50 | -8.615850e-47 |
| Msa0949780 | Msa1126310 | 0.806195 | 9.256217e-50 | -8.615850e-47 |
| Msa0949780 | Msa1145370 | 0.808362 | 3.215553e-50 | -8.615850e-47 |
| Msa0949780 | Msa1150170 | 0.811755 | 5.974411e-51 | -8.615850e-47 |
| Msa0949780 | Msa1154130 | 0.812326 | 4.485017e-51 | -8.615850e-47 |
| Msa0949780 | Msa1156210 | 0.802322 | 5.927922e-49 | -8.615850e-47 |
| Msa0949780 | Msa1159420 | 0.819252 | 1.280311e-52 | -8.615850e-47 |
| Msa0949780 | Msa1162470 | 0.824620 | 7.312575e-54 | -8.615850e-47 |
| Msa0949780 | Msa1167160 | 0.803755 | 2.996598e-49 | -8.615850e-47 |
| Msa0949780 | Msa1177300 | 0.810797 | 9.640819e-51 | -8.615850e-47 |
| Msa0949780 | Msa1177960 | 0.810222 | 1.282917e-50 | -8.615850e-47 |
| Msa0949780 | Msa1183730 | 0.810090 | 1.369996e-50 | -8.615850e-47 |
| Msa0949780 | Msa1193680 | 0.837364 | 5.430635e-57 | -8.615850e-47 |
| Msa0949780 | Msa1196990 | 0.808785 | 2.611353e-50 | -8.615850e-47 |
| Msa0949780 | Msa1206440 | 0.805222 | 1.481580e-49 | -8.615850e-47 |
| Msa0949780 | Msa1206560 | 0.816333 | 5.837374e-52 | -8.615850e-47 |
| Msa0949780 | Msa1207280 | 0.804601 | 1.997546e-49 | -8.615850e-47 |
| Msa0949780 | Msa1208630 | 0.833320 | 5.706768e-56 | -8.615850e-47 |
| Msa0949780 | Msa1208750 | 0.824633 | 7.260752e-54 | -8.615850e-47 |
| Msa0949780 | Msa1212070 | 0.805005 | 1.644645e-49 | -8.615850e-47 |
| Msa0949780 | Msa1223600 | 0.833840 | 4.232932e-56 | -8.615850e-47 |
| Msa0949780 | Msa1228950 | 0.810527 | 1.102561e-50 | -8.615850e-47 |
| Msa0949780 | Msa1229880 | 0.811756 | 5.971714e-51 | -8.615850e-47 |
| Msa0949780 | Msa1234960 | 0.801624 | 8.248859e-49 | -8.615850e-47 |
| Msa0949780 | Msa1244180 | 0.831666 | 1.466908e-55 | -8.615850e-47 |
| Msa0949780 | Msa1250490 | 0.843102 | 1.722006e-58 | -8.615850e-47 |
| Msa0949780 | Msa1258940 | 0.824441 | 8.060494e-54 | -8.615850e-47 |
| Msa0949780 | Msa1263460 | 0.828457 | 8.895034e-55 | -8.615850e-47 |
| Msa0949780 | Msa1263590 | 0.805349 | 1.393254e-49 | -8.615850e-47 |
| Msa0949780 | Msa1263670 | 0.804461 | 2.136062e-49 | -8.615850e-47 |
| Msa0949780 | Msa1269550 | 0.807612 | 4.642776e-50 | -8.615850e-47 |
| Msa0949780 | Msa1277830 | 0.814221 | 1.720132e-51 | -8.615850e-47 |
| Msa0949780 | Msa1277930 | 0.806173 | 9.353990e-50 | -8.615850e-47 |
| Msa0949780 | Msa1279340 | 0.839192 | 1.835944e-57 | -8.615850e-47 |
| Msa0949780 | Msa1297550 | 0.804072 | 2.575035e-49 | -8.615850e-47 |
| Msa0949780 | Msa1298740 | 0.800489 | 1.407369e-48 | -8.615850e-47 |
| Msa0949780 | Msa1302750 | 0.813797 | 2.134085e-51 | -8.615850e-47 |
| Msa0949780 | Msa1310620 | 0.814117 | 1.813568e-51 | -8.615850e-47 |
| Msa0949780 | Msa1317090 | 0.827280 | 1.706656e-54 | -8.615850e-47 |
| Msa0949780 | Msa1325650 | 0.830300 | 3.173246e-55 | -8.615850e-47 |
| Msa0949780 | Msa1348770 | 0.812480 | 4.150424e-51 | -8.615850e-47 |
| Msa0949780 | Msa1350350 | 0.808725 | 2.689597e-50 | -8.615850e-47 |
| Msa0949780 | Msa1351370 | 0.803518 | 3.354590e-49 | -8.615850e-47 |
| Msa0949780 | Msa1356500 | 0.802739 | 4.863208e-49 | -8.615850e-47 |
| Msa0949780 | Msa1359950 | 0.823299 | 1.492624e-53 | -8.615850e-47 |
| Msa0949780 | Msa1364650 | 0.811604 | 6.443706e-51 | -8.615850e-47 |
| Msa0949780 | Msa1367810 | 0.801499 | 8.748627e-49 | -8.615850e-47 |
| Msa0949780 | Msa1368730 | 0.826097 | 3.269827e-54 | -8.615850e-47 |
| Msa0949780 | Msa1368800 | 0.806767 | 7.008656e-50 | -8.615850e-47 |
| Msa0949780 | Msa1374810 | 0.836184 | 1.085637e-56 | -8.615850e-47 |
| Msa0949780 | Msa1374850 | 0.804101 | 2.539541e-49 | -8.615850e-47 |
| Msa0949780 | Msa1375120 | 0.809251 | 2.075160e-50 | -8.615850e-47 |
| Msa0949780 | Msa1375600 | 0.808726 | 2.688557e-50 | -8.615850e-47 |
| Msa0949780 | Msa1376560 | 0.817175 | 3.779751e-52 | -8.615850e-47 |
| Msa0949780 | Msa1387650 | 0.826632 | 2.439349e-54 | -8.615850e-47 |
| Msa0949780 | Msa1393200 | 0.815272 | 1.006594e-51 | -8.615850e-47 |
| Msa0949780 | Msa1407710 | 0.800681 | 1.285905e-48 | -8.615850e-47 |
| Msa0949780 | Msa1412750 | 0.806758 | 7.042060e-50 | -8.615850e-47 |
| Msa0949780 | Msa1415250 | 0.807507 | 4.886239e-50 | -8.615850e-47 |
| Msa0949780 | Msa1416460 | 0.800752 | 1.243833e-48 | -8.615850e-47 |
| Msa0949780 | Msa1422490 | 0.811828 | 5.759081e-51 | -8.615850e-47 |
| Msa0949780 | Msa1422500 | 0.808780 | 2.617676e-50 | -8.615850e-47 |
| Msa0949780 | Msa1424240 | 0.834285 | 3.273411e-56 | -8.615850e-47 |
| Msa0949780 | Msa1428050 | 0.802487 | 5.482171e-49 | -8.615850e-47 |
| Msa0949780 | Msa1429390 | 0.811996 | 5.292653e-51 | -8.615850e-47 |
| Msa0949780 | Msa1430940 | 0.832272 | 1.039064e-55 | -8.615850e-47 |
| Msa0949780 | Msa1439800 | 0.815779 | 7.760906e-52 | -8.615850e-47 |
| Msa0949780 | Msa1444750 | 0.816510 | 5.328408e-52 | -8.615850e-47 |
| Msa0949780 | Msa1449320 | 0.809221 | 2.106399e-50 | -8.615850e-47 |
| Msa0949780 | Msa1449510 | 0.838232 | 3.250178e-57 | -8.615850e-47 |
| Msa0949780 | Msa1449680 | 0.804980 | 1.664720e-49 | -8.615850e-47 |
| Msa0949780 | Msa1451840 | 0.827238 | 1.747374e-54 | -8.615850e-47 |
| Msa0949780 | Msa1455120 | 0.824730 | 6.890775e-54 | -8.615850e-47 |
| Msa0949780 | Msa1458330 | 0.800772 | 1.232105e-48 | -8.615850e-47 |
| Msa0949780 | Msa1460650 | 0.814924 | 1.202463e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0949780 | MtrunA17_Chr6g0465111 | 84.709 | 412 | 12 | 2 | 1 | 412 | 1 | 361 | 0.0 | 701 |
| Msa0949780 | MtrunA17_Chr6g0465121 | 81.068 | 412 | 22 | 4 | 1 | 412 | 14 | 369 | 0.0 | 659 |
| Msa0949780 | MtrunA17_Chr1g0200981 | 60.591 | 406 | 109 | 2 | 7 | 412 | 6 | 360 | 1.88e-178 | 501 |
| Msa0949780 | MtrunA17_Chr6g0464971 | 54.034 | 409 | 137 | 1 | 3 | 411 | 5 | 362 | 2.97e-162 | 460 |
| Msa0949780 | MtrunA17_Chr6g0464961 | 55.012 | 409 | 133 | 2 | 3 | 411 | 27 | 384 | 5.65e-154 | 442 |
| Msa0949780 | MtrunA17_Chr6g0477771 | 48.068 | 414 | 159 | 4 | 1 | 410 | 1 | 362 | 1.97e-136 | 395 |
| Msa0949780 | MtrunA17_Chr3g0110001 | 47.816 | 412 | 164 | 3 | 1 | 410 | 1 | 363 | 8.75e-130 | 378 |
| Msa0949780 | MtrunA17_Chr6g0464931 | 67.925 | 106 | 34 | 0 | 3 | 108 | 5 | 110 | 7.42e-39 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0949780 | AT4G09670.1 | 54.745 | 411 | 135 | 2 | 1 | 411 | 1 | 360 | 8.24e-165 | 467 |
| Msa0949780 | AT1G34200.1 | 49.633 | 409 | 143 | 3 | 1 | 408 | 1 | 347 | 1.74e-136 | 395 |
| Msa0949780 | AT1G66130.1 | 38.425 | 419 | 194 | 9 | 1 | 410 | 1 | 364 | 4.05e-89 | 274 |
Find 119 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAATTGCGTCACAATTAT+TGG | 0.148469 | 6_3:-36856165 | None:intergenic |
| TTCATCAGAATTGATTTAAT+TGG | 0.185688 | 6_3:-36854276 | None:intergenic |
| CCCTTCATCACCTCCGTTCT+AGG | 0.227507 | 6_3:-36852214 | None:intergenic |
| TTGGAAGATGGGGAGAAGTT+TGG | 0.239434 | 6_3:+36852241 | Msa0949780:CDS |
| CTTGATGATTGGAACAAGTT+TGG | 0.240508 | 6_3:+36852698 | Msa0949780:CDS |
| CTTGTGGTGCTTCTTTATAT+TGG | 0.262780 | 6_3:+36855547 | Msa0949780:CDS |
| TTCGTACGAGCCGTAGATTT+TGG | 0.277938 | 6_3:-36851981 | None:intergenic |
| CCAATCCGTTTCGGCATTCT+CGG | 0.279201 | 6_3:+36851827 | Msa0949780:CDS |
| GGAGTGTGGGGTGCAGTTTA+TGG | 0.281913 | 6_3:+36852168 | Msa0949780:CDS |
| TTGTGGTGCTTCTTTATATT+GGG | 0.306468 | 6_3:+36855548 | Msa0949780:CDS |
| CAGCAGTTATATCCATTGTT+AGG | 0.316283 | 6_3:-36855614 | None:intergenic |
| ACGAAGGATGGTATTGTGTT+AGG | 0.316467 | 6_3:+36855436 | Msa0949780:CDS |
| TAGGAAAACACAACTGATAT+TGG | 0.320047 | 6_3:+36855884 | Msa0949780:CDS |
| TTGATGATCTTGTCACTAGA+TGG | 0.326810 | 6_3:+36855727 | Msa0949780:CDS |
| CTCGACGCTCTTGGGTCTCT+TGG | 0.329706 | 6_3:+36855411 | Msa0949780:CDS |
| TGGAAGATGGGGAGAAGTTT+GGG | 0.338781 | 6_3:+36852242 | Msa0949780:CDS |
| TCTACCTCAGGAGGCTCTTA+TGG | 0.340576 | 6_3:+36855785 | Msa0949780:CDS |
| AAGCCGGATCTCGACGCTCT+TGG | 0.345774 | 6_3:+36855402 | Msa0949780:CDS |
| TAAATCAATTCTGATGAATT+CGG | 0.349761 | 6_3:+36854281 | Msa0949780:CDS |
| CATTCCCTCTTTCAACTTGA+AGG | 0.356302 | 6_3:-36856108 | None:intergenic |
| ACGTAAACAGCATCAACATT+AGG | 0.358563 | 6_3:-36852019 | None:intergenic |
| CGACGACGTTGCATGTGAAA+TGG | 0.359695 | 6_3:+36852050 | Msa0949780:CDS |
| TTGATGATTGGAACAAGTTT+GGG | 0.375215 | 6_3:+36852699 | Msa0949780:CDS |
| ACGCGAAACCGGAGAAGAAA+TGG | 0.375990 | 6_3:+36855850 | Msa0949780:CDS |
| GGCGGTGGCTGCGGCGAAGA+AGG | 0.379367 | 6_3:+36852072 | Msa0949780:CDS |
| TTTAGCGAAGGTAGTTGCTT+TGG | 0.389419 | 6_3:-36851936 | None:intergenic |
| CAAGTTTGGGCAGGTTAACT+TGG | 0.390727 | 6_3:+36852712 | Msa0949780:CDS |
| TGATGGAGTTTCTTGATGAT+TGG | 0.394891 | 6_3:+36852687 | Msa0949780:CDS |
| TGCGTCACAATTATTGGAAC+TGG | 0.396392 | 6_3:-36856159 | None:intergenic |
| CGTGAAGGCTTCGATTGATA+AGG | 0.397262 | 6_3:+36855911 | Msa0949780:CDS |
| TTATTGCGACGCACTAATAA+CGG | 0.401566 | 6_3:-36856010 | None:intergenic |
| GACCCAAGAGCGTCGAGATC+CGG | 0.402511 | 6_3:-36855405 | None:intergenic |
| ATAACTGCTGTTGGAACAAA+AGG | 0.407156 | 6_3:+36855627 | Msa0949780:CDS |
| ATCAGCACCAAATGTAAAAC+AGG | 0.414584 | 6_3:-36855349 | None:intergenic |
| AACAAAGATCCGAGTTCAGC+AGG | 0.417417 | 6_3:-36855987 | None:intergenic |
| ATATCATTCTCGAGAAAATC+AGG | 0.420310 | 6_3:-36855372 | None:intergenic |
| TGATGATCTTGTCACTAGAT+GGG | 0.421613 | 6_3:+36855728 | Msa0949780:CDS |
| GTGAAGGCTTCGATTGATAA+GGG | 0.430595 | 6_3:+36855912 | Msa0949780:CDS |
| ATAGTTGGCCATTTCTTCTC+CGG | 0.434469 | 6_3:-36855858 | None:intergenic |
| GAAGTTTGGGAAGGTTAAAT+CGG | 0.436713 | 6_3:+36852255 | Msa0949780:CDS |
| CGAAGGATGGTATTGTGTTA+GGG | 0.443488 | 6_3:+36855437 | Msa0949780:CDS |
| CGTAAACAGCATCAACATTA+GGG | 0.444017 | 6_3:-36852018 | None:intergenic |
| GCGGTGGCTGCGGCGAAGAA+GGG | 0.444964 | 6_3:+36852073 | Msa0949780:CDS |
| TGTGGGGTGCAGTTTATGGA+TGG | 0.445150 | 6_3:+36852172 | Msa0949780:CDS |
| TGAAGGTGTGTGAGGAGTGT+GGG | 0.450982 | 6_3:+36852155 | Msa0949780:CDS |
| ACTATGTGAAAACATACTTC+AGG | 0.453725 | 6_3:+36854338 | Msa0949780:CDS |
| GCTTCTTTATATTGGGAAGA+TGG | 0.456272 | 6_3:+36855555 | Msa0949780:CDS |
| TCCTAGAACGGAGGTGATGA+AGG | 0.459813 | 6_3:+36852213 | Msa0949780:CDS |
| GAATGATATCCGTGTGAAGC+CGG | 0.461888 | 6_3:+36855386 | Msa0949780:CDS |
| TGAGAGTTTGCGGGCTATGT+CGG | 0.462358 | 6_3:-36851855 | None:intergenic |
| CCGAGAATGCCGAAACGGAT+TGG | 0.465327 | 6_3:-36851827 | None:intergenic |
| TGTGAAATGGGCGGTGGCTG+CGG | 0.466954 | 6_3:+36852063 | Msa0949780:CDS |
| CTTATCAATCGAAGCCTTCA+CGG | 0.476737 | 6_3:-36855910 | None:intergenic |
| GAATGGCGCGTGAGAGTTTG+CGG | 0.478095 | 6_3:-36851865 | None:intergenic |
| GACGACGTTGCATGTGAAAT+GGG | 0.478723 | 6_3:+36852051 | Msa0949780:CDS |
| AGAAATGGCCAACTATTAGT+AGG | 0.484377 | 6_3:+36855865 | Msa0949780:CDS |
| GTGAAGGTGTGTGAGGAGTG+TGG | 0.484508 | 6_3:+36852154 | Msa0949780:CDS |
| GGTCTCTTGGCGACGAAGGA+TGG | 0.484511 | 6_3:+36855424 | Msa0949780:CDS |
| GACGGCGGAGATTGTGGCGG+TGG | 0.486483 | 6_3:-36851897 | None:intergenic |
| AAGAGTGTTAGGAATTATGA+TGG | 0.499119 | 6_3:+36852670 | Msa0949780:CDS |
| GAAGTTATTGAGTTTAGCGA+AGG | 0.509246 | 6_3:-36851948 | None:intergenic |
| GATGATCTTGTCACTAGATG+GGG | 0.509897 | 6_3:+36855729 | Msa0949780:CDS |
| GTCTTTCACCCTGCTGAACT+CGG | 0.510057 | 6_3:+36855978 | Msa0949780:three_prime_UTR |
| CGGTGGCTGCGGCGAAGAAG+GGG | 0.510716 | 6_3:+36852074 | Msa0949780:CDS |
| AATGCCGAAACGGATTGGTT+CGG | 0.512845 | 6_3:-36851822 | None:intergenic |
| ACAATGGATATAACTGCTGT+TGG | 0.516664 | 6_3:+36855618 | Msa0949780:CDS |
| CGCAACCGAGAATGCCGAAA+CGG | 0.519691 | 6_3:-36851832 | None:intergenic |
| ACAAGACCAAAGGATTCAAA+AGG | 0.521263 | 6_3:+36856223 | Msa0949780:three_prime_UTR |
| TTGTGTTAGGGCAATTCTGT+GGG | 0.521428 | 6_3:+36855449 | Msa0949780:CDS |
| CAAACCGAACCAATCCGTTT+CGG | 0.521658 | 6_3:+36851818 | Msa0949780:CDS |
| GCTTCCGACGGCGGAGATTG+TGG | 0.526770 | 6_3:-36851903 | None:intergenic |
| TTTCATTCCTGAATCTGTAC+AGG | 0.527130 | 6_3:-36855942 | None:intergenic |
| GGAGAGAGTGCGGCTTCCGA+CGG | 0.533874 | 6_3:-36851915 | None:intergenic |
| CTTGGGTCTCTTGGCGACGA+AGG | 0.539674 | 6_3:+36855420 | Msa0949780:CDS |
| ACTCCAGCTTTATTAAGCAC+TGG | 0.541763 | 6_3:-36855516 | None:intergenic |
| GCCGGTGGCGGTTAGTGTGA+AGG | 0.543065 | 6_3:+36852117 | Msa0949780:CDS |
| ATTGTGTTAGGGCAATTCTG+TGG | 0.545531 | 6_3:+36855448 | Msa0949780:CDS |
| ATTAAGCACTGGCTCGCGAT+AGG | 0.545867 | 6_3:-36855505 | None:intergenic |
| TATGACCTTCAAGTTGAAAG+AGG | 0.553797 | 6_3:+36856103 | Msa0949780:three_prime_UTR |
| TCCTTCACACTAACCGCCAC+CGG | 0.555864 | 6_3:-36852118 | None:intergenic |
| ACATGCAACGTCGTCGGTAA+CGG | 0.555872 | 6_3:-36852043 | None:intergenic |
| AATGGCGCGTGAGAGTTTGC+GGG | 0.557508 | 6_3:-36851864 | None:intergenic |
| TTTCTTATCTAACCTAACAA+TGG | 0.559985 | 6_3:+36855602 | Msa0949780:CDS |
| GTGGGGTGCAGTTTATGGAT+GGG | 0.567208 | 6_3:+36852173 | Msa0949780:CDS |
| TTTGCTTGAGAAGCCGGTGG+CGG | 0.568853 | 6_3:+36852105 | Msa0949780:CDS |
| CCTAGAACGGAGGTGATGAA+GGG | 0.571024 | 6_3:+36852214 | Msa0949780:CDS |
| TGATTGGAACAAGTTTGGGC+AGG | 0.571668 | 6_3:+36852703 | Msa0949780:CDS |
| CCTCCCACCGCCAAAATCTA+CGG | 0.577677 | 6_3:+36851971 | Msa0949780:CDS |
| GAGCCAGTGCTTAATAAAGC+TGG | 0.580556 | 6_3:+36855513 | Msa0949780:CDS |
| AGATTGTGGCGGTGGAAGAG+AGG | 0.581797 | 6_3:-36851889 | None:intergenic |
| AATAGAAAACGATCTACCTC+AGG | 0.582701 | 6_3:+36855773 | Msa0949780:CDS |
| ACTGATATTGGATGCCGTGA+AGG | 0.586470 | 6_3:+36855896 | Msa0949780:CDS |
| CGTCGAGATCCGGCTTCACA+CGG | 0.598427 | 6_3:-36855395 | None:intergenic |
| ACCGCCACAATCTCCGCCGT+CGG | 0.602355 | 6_3:+36851899 | Msa0949780:CDS |
| GGCGGTGGAAGAGAGGAGAA+TGG | 0.605266 | 6_3:-36851882 | None:intergenic |
| GTTGCATGTGAAATGGGCGG+TGG | 0.605659 | 6_3:+36852057 | Msa0949780:CDS |
| GAAATCAATAACAAGACCAA+AGG | 0.609033 | 6_3:+36856213 | Msa0949780:three_prime_UTR |
| GAAGGTGTGTGAGGAGTGTG+GGG | 0.614462 | 6_3:+36852156 | Msa0949780:CDS |
| AGATGGGGAGAAGTTTGGGA+AGG | 0.616271 | 6_3:+36852246 | Msa0949780:CDS |
| GAGAGTGCGGCTTCCGACGG+CGG | 0.617179 | 6_3:-36851912 | None:intergenic |
| ATGACCTTCAAGTTGAAAGA+GGG | 0.619933 | 6_3:+36856104 | Msa0949780:three_prime_UTR |
| AGAAAACGATCTACCTCAGG+AGG | 0.623275 | 6_3:+36855776 | Msa0949780:CDS |
| TAGTTGCTTTGGAGAGAGTG+CGG | 0.626448 | 6_3:-36851925 | None:intergenic |
| CAGTATTGCTGTCATGTATG+TGG | 0.627499 | 6_3:+36856063 | Msa0949780:three_prime_UTR |
| GGAGTTTGATGAGATTGTGA+AGG | 0.628031 | 6_3:+36852138 | Msa0949780:CDS |
| GTGGATGCATCATCCTAGAA+CGG | 0.629139 | 6_3:+36852201 | Msa0949780:CDS |
| ACAAAGATCCGAGTTCAGCA+GGG | 0.639775 | 6_3:-36855986 | None:intergenic |
| CATTTCACATGCAACGTCGT+CGG | 0.650632 | 6_3:-36852049 | None:intergenic |
| AGTTTATGGATGGGACTATG+TGG | 0.660551 | 6_3:+36852182 | Msa0949780:CDS |
| TGAGATTGTGAAGGTGTGTG+AGG | 0.665830 | 6_3:+36852147 | Msa0949780:CDS |
| GATGCATCATCCTAGAACGG+AGG | 0.667515 | 6_3:+36852204 | Msa0949780:CDS |
| GCTGGAGTGATTCTATCTTG+TGG | 0.667775 | 6_3:+36855531 | Msa0949780:CDS |
| TCATACTAGAGATCAACAGA+AGG | 0.670289 | 6_3:+36854307 | Msa0949780:CDS |
| CTAGAACGGAGGTGATGAAG+GGG | 0.676280 | 6_3:+36852215 | Msa0949780:CDS |
| TCCGACGGCGGAGATTGTGG+CGG | 0.676703 | 6_3:-36851900 | None:intergenic |
| TATTGCTGTCATGTATGTGG+TGG | 0.688986 | 6_3:+36856066 | Msa0949780:three_prime_UTR |
| GTTACCATAAGAGCCTCCTG+AGG | 0.732372 | 6_3:-36855789 | None:intergenic |
| GACGTTGCATGTGAAATGGG+CGG | 0.751365 | 6_3:+36852054 | Msa0949780:CDS |
| TGTGACGCAATTTGTCACTG+TGG | 0.752298 | 6_3:+36856173 | Msa0949780:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTCATTTTTAAATTA+CGG | - | chr6_3:36853011-36853030 | None:intergenic | 10.0% |
| !!! | TTAAGAAAATATAAGCTTTT+TGG | + | chr6_3:36852378-36852397 | Msa0949780:intron | 15.0% |
| !!! | TAAGAAAATATAAGCTTTTT+GGG | + | chr6_3:36852379-36852398 | Msa0949780:intron | 15.0% |
| !! | TAGATATTAATGATGATTTA+AGG | + | chr6_3:36852568-36852587 | Msa0949780:intron | 15.0% |
| !! | AGATATTAATGATGATTTAA+GGG | + | chr6_3:36852569-36852588 | Msa0949780:intron | 15.0% |
| !!! | ATTTAGGTATTTTTTTGTTA+CGG | + | chr6_3:36852602-36852621 | Msa0949780:intron | 15.0% |
| !!! | TACTTTTCGTTTTTAAATTA+CGG | + | chr6_3:36852882-36852901 | Msa0949780:intron | 15.0% |
| !!! | AGATTAATTTTAGAGATTTA+AGG | + | chr6_3:36853268-36853287 | Msa0949780:intron | 15.0% |
| !! | ATGAAATATTTGCATAAATT+AGG | + | chr6_3:36853688-36853707 | Msa0949780:intron | 15.0% |
| !! | AAATTGTTCAAATTTACATA+CGG | - | chr6_3:36855164-36855183 | None:intergenic | 15.0% |
| !! | CAATAAGAAAAAAATATTTC+TGG | + | chr6_3:36856027-36856046 | Msa0949780:three_prime_UTR | 15.0% |
| !!! | TTTTAGATATTAAGAGTGTT+AGG | + | chr6_3:36852659-36852678 | Msa0949780:intron | 20.0% |
| !! | TAAGAAAATAGAAGTGATTT+AGG | + | chr6_3:36853513-36853532 | Msa0949780:intron | 20.0% |
| !! | CAAATATTTCATATTAGTAC+TGG | - | chr6_3:36853680-36853699 | None:intergenic | 20.0% |
| !!! | GTTTTAGCTATCAAAATTTT+AGG | + | chr6_3:36854166-36854185 | Msa0949780:intron | 20.0% |
| !!! | TTCATCAGAATTGATTTAAT+TGG | - | chr6_3:36854279-36854298 | None:intergenic | 20.0% |
| !! | TAAATCAATTCTGATGAATT+CGG | + | chr6_3:36854281-36854300 | Msa0949780:CDS | 20.0% |
| !! | AATAATTTATGAGTCTCTAA+GGG | - | chr6_3:36854842-36854861 | None:intergenic | 20.0% |
| !! | TAATAATTTATGAGTCTCTA+AGG | - | chr6_3:36854843-36854862 | None:intergenic | 20.0% |
| !! | ATTTAAGTATTAATGAAGCA+CGG | + | chr6_3:36854876-36854895 | Msa0949780:intron | 20.0% |
| !! | AATTGTTCAAATTTACATAC+GGG | - | chr6_3:36855163-36855182 | None:intergenic | 20.0% |
| !!! | AAGCTTTTTGGGAATTAAAT+CGG | + | chr6_3:36852390-36852409 | Msa0949780:intron | 25.0% |
| ! | TAACATTGATGTATGAATCA+AGG | + | chr6_3:36852515-36852534 | Msa0949780:intron | 25.0% |
| !! | TAGATATTGATGATACCTTA+AGG | + | chr6_3:36852814-36852833 | Msa0949780:intron | 25.0% |
| !! | AGATATTGATGATACCTTAA+GGG | + | chr6_3:36852815-36852834 | Msa0949780:intron | 25.0% |
| !! | AAATCGCTTCTATTTTCTTA+GGG | - | chr6_3:36853078-36853097 | None:intergenic | 25.0% |
| !! | TAAATCGCTTCTATTTTCTT+AGG | - | chr6_3:36853079-36853098 | None:intergenic | 25.0% |
| ! | AAGAAAATAGAAGCGATTTA+AGG | + | chr6_3:36853079-36853098 | Msa0949780:intron | 25.0% |
| ! | TAAGAGAATAGAAGTGATTT+AGG | + | chr6_3:36853202-36853221 | Msa0949780:intron | 25.0% |
| ! | AAGAGAATAGAAGTGATTTA+GGG | + | chr6_3:36853203-36853222 | Msa0949780:intron | 25.0% |
| !!! | GAAACATGATTTTGATGTTA+TGG | + | chr6_3:36853557-36853576 | Msa0949780:intron | 25.0% |
| ! | ATACTTGAGATACTGAAATT+AGG | + | chr6_3:36853730-36853749 | Msa0949780:intron | 25.0% |
| !!! | AAAGGGACTAAATTGATTTT+CGG | + | chr6_3:36854414-36854433 | Msa0949780:intron | 25.0% |
| ! | TCAACTTCATTTCGTAAATT+TGG | + | chr6_3:36854440-36854459 | Msa0949780:intron | 25.0% |
| ! | AAAAGAGTAAGTGAACATTA+TGG | - | chr6_3:36854500-36854519 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr6_3:36854992-36855011 | Msa0949780:intron | 25.0% |
| ! | ATAGTTAATAGTATGAAGCA+CGG | - | chr6_3:36855070-36855089 | None:intergenic | 25.0% |
| !!! | TTGGTTCTTAATTTTAGATC+TGG | - | chr6_3:36855096-36855115 | None:intergenic | 25.0% |
| !! | AATGGTATAACTTTCTGTTT+TGG | - | chr6_3:36855115-36855134 | None:intergenic | 25.0% |
| ! | AAAACAGAAAGTTATACCAT+TGG | + | chr6_3:36855114-36855133 | Msa0949780:intron | 25.0% |
| ! | TTTCTTATCTAACCTAACAA+TGG | + | chr6_3:36855602-36855621 | Msa0949780:CDS | 25.0% |
| !! | TTTTCTATTACGTGCTTATT+CGG | - | chr6_3:36855762-36855781 | None:intergenic | 25.0% |
| ! | TTGTGATGATAAGTGTTTTG+CGG | - | chr6_3:36851785-36851804 | None:intergenic | 30.0% |
| TAAGGGAATAGAAGTGATTT+AGG | + | chr6_3:36852586-36852605 | Msa0949780:intron | 30.0% | |
| !! | AAGAGTGTTAGGAATTATGA+TGG | + | chr6_3:36852670-36852689 | Msa0949780:CDS | 30.0% |
| ! | TTGATGATTGGAACAAGTTT+GGG | + | chr6_3:36852699-36852718 | Msa0949780:CDS | 30.0% |
| ! | AGATTTAAGGTTCGTTTGAT+AGG | + | chr6_3:36853281-36853300 | Msa0949780:intron | 30.0% |
| !! | CAATCTGTAAGTATCGTTTT+AGG | - | chr6_3:36853470-36853489 | None:intergenic | 30.0% |
| !! | AGATTAGAGCACTTTTGTTA+CGG | + | chr6_3:36853592-36853611 | Msa0949780:intron | 30.0% |
| TGCATAAATTAGGAGAATGT+AGG | + | chr6_3:36853698-36853717 | Msa0949780:intron | 30.0% | |
| TACCACATATCAATGACTAT+CGG | - | chr6_3:36853790-36853809 | None:intergenic | 30.0% | |
| !!! | TGTTTTGATTAAGAGTCTAG+CGG | + | chr6_3:36853888-36853907 | Msa0949780:intron | 30.0% |
| !!! | TGCATTTTTTCTCCACAATT+GGG | - | chr6_3:36853928-36853947 | None:intergenic | 30.0% |
| !!! | ATGCATTTTTTCTCCACAAT+TGG | - | chr6_3:36853929-36853948 | None:intergenic | 30.0% |
| ACAAGAACATTTGATATGCA+GGG | - | chr6_3:36853971-36853990 | None:intergenic | 30.0% | |
| TACAAGAACATTTGATATGC+AGG | - | chr6_3:36853972-36853991 | None:intergenic | 30.0% | |
| AGTTTCTATACCACATGAAA+TGG | + | chr6_3:36854034-36854053 | Msa0949780:intron | 30.0% | |
| GTTTCTATACCACATGAAAT+GGG | + | chr6_3:36854035-36854054 | Msa0949780:intron | 30.0% | |
| ATTATCTACACTCATCCAAT+GGG | + | chr6_3:36854065-36854084 | Msa0949780:intron | 30.0% | |
| ! | GAATTGATTTAATTGGCTGA+AGG | - | chr6_3:36854272-36854291 | None:intergenic | 30.0% |
| ACTATGTGAAAACATACTTC+AGG | + | chr6_3:36854338-36854357 | Msa0949780:CDS | 30.0% | |
| AAAACTCAACATTTCTGATC+CGG | + | chr6_3:36854383-36854402 | Msa0949780:intron | 30.0% | |
| ! | TTAGTCCCTTTTAATCTAAC+CGG | - | chr6_3:36854405-36854424 | None:intergenic | 30.0% |
| ACTTCATTTCGTAAATTTGG+AGG | + | chr6_3:36854443-36854462 | Msa0949780:intron | 30.0% | |
| GGTTATCTAAATTCTATAGC+AGG | - | chr6_3:36854479-36854498 | None:intergenic | 30.0% | |
| ! | CTTACTCTTTTCCAAATAGT+TGG | + | chr6_3:36854509-36854528 | Msa0949780:intron | 30.0% |
| TTGTTCAGAAACCAACTATT+TGG | - | chr6_3:36854523-36854542 | None:intergenic | 30.0% | |
| TTCAAATTTACATACGGGAA+AGG | - | chr6_3:36855158-36855177 | None:intergenic | 30.0% | |
| ! | ATTCACACCTGTTTTACATT+TGG | + | chr6_3:36855342-36855361 | Msa0949780:CDS | 30.0% |
| ATATCATTCTCGAGAAAATC+AGG | - | chr6_3:36855375-36855394 | None:intergenic | 30.0% | |
| TTGTGGTGCTTCTTTATATT+GGG | + | chr6_3:36855548-36855567 | Msa0949780:CDS | 30.0% | |
| ! | GATGCTTTCTTTTCATCATA+AGG | - | chr6_3:36855681-36855700 | None:intergenic | 30.0% |
| ! | TGTGTTTTCCTACTAATAGT+TGG | - | chr6_3:36855876-36855895 | None:intergenic | 30.0% |
| TAGGAAAACACAACTGATAT+TGG | + | chr6_3:36855884-36855903 | Msa0949780:CDS | 30.0% | |
| ACAAATTGCGTCACAATTAT+TGG | - | chr6_3:36856168-36856187 | None:intergenic | 30.0% | |
| GAAATCAATAACAAGACCAA+AGG | + | chr6_3:36856213-36856232 | Msa0949780:three_prime_UTR | 30.0% | |
| ! | ATAAGTGTTTTGCGGTTTGA+GGG | - | chr6_3:36851777-36851796 | None:intergenic | 35.0% |
| GAAGTTATTGAGTTTAGCGA+AGG | - | chr6_3:36851951-36851970 | None:intergenic | 35.0% | |
| CGTAAACAGCATCAACATTA+GGG | - | chr6_3:36852021-36852040 | None:intergenic | 35.0% | |
| ACGTAAACAGCATCAACATT+AGG | - | chr6_3:36852022-36852041 | None:intergenic | 35.0% | |
| GAAGTTTGGGAAGGTTAAAT+CGG | + | chr6_3:36852255-36852274 | Msa0949780:CDS | 35.0% | |
| ! | TGATGGAGTTTCTTGATGAT+TGG | + | chr6_3:36852687-36852706 | Msa0949780:CDS | 35.0% |
| ! | CTTGATGATTGGAACAAGTT+TGG | + | chr6_3:36852698-36852717 | Msa0949780:CDS | 35.0% |
| ! | CTATTTTCTTAGGGTGTGTT+TGG | - | chr6_3:36853069-36853088 | None:intergenic | 35.0% |
| AAGCAGAAATTGTGTTTGTG+TGG | + | chr6_3:36853367-36853386 | Msa0949780:intron | 35.0% | |
| ! | ACTATCGGCTGAAGATAATT+AGG | - | chr6_3:36853775-36853794 | None:intergenic | 35.0% |
| !!! | GCATTTTTTCTCCACAATTG+GGG | - | chr6_3:36853927-36853946 | None:intergenic | 35.0% |
| TGTGGAGAAAAAATGCATTG+CGG | + | chr6_3:36853931-36853950 | Msa0949780:intron | 35.0% | |
| AGTGCAACTCAGTAGATAAA+AGG | - | chr6_3:36853996-36854015 | None:intergenic | 35.0% | |
| ATCTACTGAGTTGCACTTAT+AGG | + | chr6_3:36853999-36854018 | Msa0949780:intron | 35.0% | |
| CATTATCTACACTCATCCAA+TGG | + | chr6_3:36854064-36854083 | Msa0949780:intron | 35.0% | |
| !! | ATCCAATGGGCTATTGATTT+GGG | + | chr6_3:36854078-36854097 | Msa0949780:intron | 35.0% |
| TTCACTCATTTGATAAGCTC+AGG | - | chr6_3:36854141-36854160 | None:intergenic | 35.0% | |
| TAATTTGACCTTCGCATACT+TGG | - | chr6_3:36854211-36854230 | None:intergenic | 35.0% | |
| TGATTTAATTGGCTGAAGGA+AGG | - | chr6_3:36854268-36854287 | None:intergenic | 35.0% | |
| TCATACTAGAGATCAACAGA+AGG | + | chr6_3:36854307-36854326 | Msa0949780:CDS | 35.0% | |
| TCTGATCCGGTTAGATTAAA+AGG | + | chr6_3:36854396-36854415 | Msa0949780:intron | 35.0% | |
| CTGATCCGGTTAGATTAAAA+GGG | + | chr6_3:36854397-36854416 | Msa0949780:intron | 35.0% | |
| TCTGAACAAACAACAGTTAC+AGG | + | chr6_3:36854534-36854553 | Msa0949780:intron | 35.0% | |
| !! | CAACAGTTACAGGTTTTAGT+TGG | + | chr6_3:36854544-36854563 | Msa0949780:intron | 35.0% |
| TTGGCTTATTGTATAGAGAG+TGG | + | chr6_3:36854563-36854582 | Msa0949780:intron | 35.0% | |
| AGCAGAGTGAAAAAAATTCC+TGG | + | chr6_3:36854617-36854636 | Msa0949780:intron | 35.0% | |
| AACATTACTTGACATTGACC+AGG | - | chr6_3:36854638-36854657 | None:intergenic | 35.0% | |
| GAAAAACGCAAAGCAATACT+TGG | - | chr6_3:36854685-36854704 | None:intergenic | 35.0% | |
| TGTATTTGTTTACGATGCCT+TGG | + | chr6_3:36854808-36854827 | Msa0949780:intron | 35.0% | |
| ! | TTTATGAGTCTCTAAGGGAA+AGG | - | chr6_3:36854837-36854856 | None:intergenic | 35.0% |
| ! | ACCATTGGTATTAGTCTATC+AGG | + | chr6_3:36855129-36855148 | Msa0949780:intron | 35.0% |
| ! | CCATTGGTATTAGTCTATCA+GGG | + | chr6_3:36855130-36855149 | Msa0949780:intron | 35.0% |
| ATCAGCACCAAATGTAAAAC+AGG | - | chr6_3:36855352-36855371 | None:intergenic | 35.0% | |
| ! | CGATAGGCTAATACTGTTTT+TGG | - | chr6_3:36855492-36855511 | None:intergenic | 35.0% |
| CTTGTGGTGCTTCTTTATAT+TGG | + | chr6_3:36855547-36855566 | Msa0949780:CDS | 35.0% | |
| GCTTCTTTATATTGGGAAGA+TGG | + | chr6_3:36855555-36855574 | Msa0949780:CDS | 35.0% | |
| CAGCAGTTATATCCATTGTT+AGG | - | chr6_3:36855617-36855636 | None:intergenic | 35.0% | |
| ACAATGGATATAACTGCTGT+TGG | + | chr6_3:36855618-36855637 | Msa0949780:CDS | 35.0% | |
| ATAACTGCTGTTGGAACAAA+AGG | + | chr6_3:36855627-36855646 | Msa0949780:CDS | 35.0% | |
| ! | TTGATGATCTTGTCACTAGA+TGG | + | chr6_3:36855727-36855746 | Msa0949780:CDS | 35.0% |
| TGATGATCTTGTCACTAGAT+GGG | + | chr6_3:36855728-36855747 | Msa0949780:CDS | 35.0% | |
| AATAGAAAACGATCTACCTC+AGG | + | chr6_3:36855773-36855792 | Msa0949780:CDS | 35.0% | |
| ! | GGTAACTGAATTTTCTCGTT+TGG | + | chr6_3:36855806-36855825 | Msa0949780:CDS | 35.0% |
| ! | AACTGAATTTTCTCGTTTGG+TGG | + | chr6_3:36855809-36855828 | Msa0949780:CDS | 35.0% |
| CAAATTCAAAAACGCGAAAC+CGG | + | chr6_3:36855839-36855858 | Msa0949780:CDS | 35.0% | |
| AGAAATGGCCAACTATTAGT+AGG | + | chr6_3:36855865-36855884 | Msa0949780:CDS | 35.0% | |
| TTTCATTCCTGAATCTGTAC+AGG | - | chr6_3:36855945-36855964 | None:intergenic | 35.0% | |
| TTATTGCGACGCACTAATAA+CGG | - | chr6_3:36856013-36856032 | None:intergenic | 35.0% | |
| !! | TATGACCTTCAAGTTGAAAG+AGG | + | chr6_3:36856103-36856122 | Msa0949780:three_prime_UTR | 35.0% |
| !! | ATGACCTTCAAGTTGAAAGA+GGG | + | chr6_3:36856104-36856123 | Msa0949780:three_prime_UTR | 35.0% |
| ! | GATAAGTGTTTTGCGGTTTG+AGG | - | chr6_3:36851778-36851797 | None:intergenic | 40.0% |
| TTTAGCGAAGGTAGTTGCTT+TGG | - | chr6_3:36851939-36851958 | None:intergenic | 40.0% | |
| GGAGTTTGATGAGATTGTGA+AGG | + | chr6_3:36852138-36852157 | Msa0949780:CDS | 40.0% | |
| AGTTTATGGATGGGACTATG+TGG | + | chr6_3:36852182-36852201 | Msa0949780:CDS | 40.0% | |
| !! | ATGAAGGGGTTTTTGGAAGA+TGG | + | chr6_3:36852229-36852248 | Msa0949780:CDS | 40.0% |
| !! | TGAAGGGGTTTTTGGAAGAT+GGG | + | chr6_3:36852230-36852249 | Msa0949780:CDS | 40.0% |
| ! | TGATACCTTAAGGGTGTGTT+TGG | + | chr6_3:36852824-36852843 | Msa0949780:intron | 40.0% |
| TCAATCCAAACACACCCTTA+AGG | - | chr6_3:36852832-36852851 | None:intergenic | 40.0% | |
| ! | TTAAGGGTGTGTTTGGATTG+AGG | + | chr6_3:36852831-36852850 | Msa0949780:intron | 40.0% |
| ! | TAAGGGTGTGTTTGGATTGA+GGG | + | chr6_3:36852832-36852851 | Msa0949780:intron | 40.0% |
| TGTGTTTGGATTGAGGGTTT+GGG | + | chr6_3:36852838-36852857 | Msa0949780:intron | 40.0% | |
| TTTCTTAGGGTGTGTTTGGA+TGG | - | chr6_3:36853065-36853084 | None:intergenic | 40.0% | |
| CATTTGACACAACATCGACA+TGG | + | chr6_3:36853160-36853179 | Msa0949780:intron | 40.0% | |
| CAGAAATTGTGTTTGTGTGG+AGG | + | chr6_3:36853370-36853389 | Msa0949780:intron | 40.0% | |
| AATTGTGTTTGTGTGGAGGA+TGG | + | chr6_3:36853374-36853393 | Msa0949780:intron | 40.0% | |
| ATTGTGTTTGTGTGGAGGAT+GGG | + | chr6_3:36853375-36853394 | Msa0949780:intron | 40.0% | |
| AGCCGATAGTCATTGATATG+TGG | + | chr6_3:36853785-36853804 | Msa0949780:intron | 40.0% | |
| AACTGCTACATAGAACAGAG+CGG | - | chr6_3:36853858-36853877 | None:intergenic | 40.0% | |
| GTGGAGAAAAAATGCATTGC+GGG | + | chr6_3:36853932-36853951 | Msa0949780:intron | 40.0% | |
| !! | CATCCAATGGGCTATTGATT+TGG | + | chr6_3:36854077-36854096 | Msa0949780:intron | 40.0% |
| !! | TCCAATGGGCTATTGATTTG+GGG | + | chr6_3:36854079-36854098 | Msa0949780:intron | 40.0% |
| !! | ATTGATTTGGGGGGTTTGTT+AGG | + | chr6_3:36854090-36854109 | Msa0949780:intron | 40.0% |
| CCCTGATAGACTAATACCAA+TGG | - | chr6_3:36855133-36855152 | None:intergenic | 40.0% | |
| ! | TACATGTTCTGCACTGATAC+TGG | + | chr6_3:36855309-36855328 | Msa0949780:intron | 40.0% |
| ACGAAGGATGGTATTGTGTT+AGG | + | chr6_3:36855436-36855455 | Msa0949780:CDS | 40.0% | |
| CGAAGGATGGTATTGTGTTA+GGG | + | chr6_3:36855437-36855456 | Msa0949780:CDS | 40.0% | |
| ATTGTGTTAGGGCAATTCTG+TGG | + | chr6_3:36855448-36855467 | Msa0949780:CDS | 40.0% | |
| TTGTGTTAGGGCAATTCTGT+GGG | + | chr6_3:36855449-36855468 | Msa0949780:CDS | 40.0% | |
| !! | ACTCCAGCTTTATTAAGCAC+TGG | - | chr6_3:36855519-36855538 | None:intergenic | 40.0% |
| GATGATCTTGTCACTAGATG+GGG | + | chr6_3:36855729-36855748 | Msa0949780:CDS | 40.0% | |
| ATAGTTGGCCATTTCTTCTC+CGG | - | chr6_3:36855861-36855880 | None:intergenic | 40.0% | |
| CTTATCAATCGAAGCCTTCA+CGG | - | chr6_3:36855913-36855932 | None:intergenic | 40.0% | |
| GTGAAGGCTTCGATTGATAA+GGG | + | chr6_3:36855912-36855931 | Msa0949780:CDS | 40.0% | |
| ! | TTTTGAGCCTGTACAGATTC+AGG | + | chr6_3:36855935-36855954 | Msa0949780:CDS | 40.0% |
| CAGTATTGCTGTCATGTATG+TGG | + | chr6_3:36856063-36856082 | Msa0949780:three_prime_UTR | 40.0% | |
| TATTGCTGTCATGTATGTGG+TGG | + | chr6_3:36856066-36856085 | Msa0949780:three_prime_UTR | 40.0% | |
| CATTCCCTCTTTCAACTTGA+AGG | - | chr6_3:36856111-36856130 | None:intergenic | 40.0% | |
| TGCGTCACAATTATTGGAAC+TGG | - | chr6_3:36856162-36856181 | None:intergenic | 40.0% | |
| CAAACCGAACCAATCCGTTT+CGG | + | chr6_3:36851818-36851837 | Msa0949780:CDS | 45.0% | |
| !! | AATGCCGAAACGGATTGGTT+CGG | - | chr6_3:36851825-36851844 | None:intergenic | 45.0% |
| !! | TAGTTGCTTTGGAGAGAGTG+CGG | - | chr6_3:36851928-36851947 | None:intergenic | 45.0% |
| ! | TTCGTACGAGCCGTAGATTT+TGG | - | chr6_3:36851984-36852003 | None:intergenic | 45.0% |
| CATTTCACATGCAACGTCGT+CGG | - | chr6_3:36852052-36852071 | None:intergenic | 45.0% | |
| GACGACGTTGCATGTGAAAT+GGG | + | chr6_3:36852051-36852070 | Msa0949780:CDS | 45.0% | |
| ! | GCATGTTTTGCTTGAGAAGC+CGG | + | chr6_3:36852099-36852118 | Msa0949780:CDS | 45.0% |
| ! | TGAGATTGTGAAGGTGTGTG+AGG | + | chr6_3:36852147-36852166 | Msa0949780:CDS | 45.0% |
| GTGGATGCATCATCCTAGAA+CGG | + | chr6_3:36852201-36852220 | Msa0949780:CDS | 45.0% | |
| !! | GAAGGGGTTTTTGGAAGATG+GGG | + | chr6_3:36852231-36852250 | Msa0949780:CDS | 45.0% |
| TTGGAAGATGGGGAGAAGTT+TGG | + | chr6_3:36852241-36852260 | Msa0949780:CDS | 45.0% | |
| TGGAAGATGGGGAGAAGTTT+GGG | + | chr6_3:36852242-36852261 | Msa0949780:CDS | 45.0% | |
| TTTCATGTCAGTGTCGTGTC+AGG | - | chr6_3:36852335-36852354 | None:intergenic | 45.0% | |
| GTCAGTATCATTGTCGTGTC+AGG | - | chr6_3:36852471-36852490 | None:intergenic | 45.0% | |
| CTACTATGTCAGTGTCGTGT+CGG | - | chr6_3:36852551-36852570 | None:intergenic | 45.0% | |
| TGATTGGAACAAGTTTGGGC+AGG | + | chr6_3:36852703-36852722 | Msa0949780:CDS | 45.0% | |
| CAAGTTTGGGCAGGTTAACT+TGG | + | chr6_3:36852712-36852731 | Msa0949780:CDS | 45.0% | |
| GTGTGTTTGGATTGAGGGTT+TGG | + | chr6_3:36852837-36852856 | Msa0949780:intron | 45.0% | |
| TTTGGATTGAGGGTTTGGGA+GGG | + | chr6_3:36852842-36852861 | Msa0949780:intron | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+GGG | - | chr6_3:36853055-36853074 | None:intergenic | 45.0% | |
| TTAGGGTGTGTTTGGATGGA+GGG | - | chr6_3:36853061-36853080 | None:intergenic | 45.0% | |
| TTGTGTTTGTGTGGAGGATG+GGG | + | chr6_3:36853376-36853395 | Msa0949780:intron | 45.0% | |
| GAGGTTTGGGCAGGTTAAAT+TGG | + | chr6_3:36853400-36853419 | Msa0949780:intron | 45.0% | |
| AAGTTCACACACCCCAATTG+TGG | + | chr6_3:36853913-36853932 | Msa0949780:intron | 45.0% | |
| !! | CCAATGGGCTATTGATTTGG+GGG | + | chr6_3:36854080-36854099 | Msa0949780:intron | 45.0% |
| !! | CAATGGGCTATTGATTTGGG+GGG | + | chr6_3:36854081-36854100 | Msa0949780:intron | 45.0% |
| TTAGTCTGCCAAGTATGCGA+AGG | + | chr6_3:36854200-36854219 | Msa0949780:intron | 45.0% | |
| CCATTTGATTCAGAAACGCC+AGG | - | chr6_3:36854781-36854800 | None:intergenic | 45.0% | |
| CCTGGCGTTTCTGAATCAAA+TGG | + | chr6_3:36854778-36854797 | Msa0949780:intron | 45.0% | |
| GTCAGAGTATGTGTCGTGTT+TGG | - | chr6_3:36854935-36854954 | None:intergenic | 45.0% | |
| GAATGATATCCGTGTGAAGC+CGG | + | chr6_3:36855386-36855405 | Msa0949780:CDS | 45.0% | |
| GAGCCAGTGCTTAATAAAGC+TGG | + | chr6_3:36855513-36855532 | Msa0949780:CDS | 45.0% | |
| GCTGGAGTGATTCTATCTTG+TGG | + | chr6_3:36855531-36855550 | Msa0949780:CDS | 45.0% | |
| AGAAAACGATCTACCTCAGG+AGG | + | chr6_3:36855776-36855795 | Msa0949780:CDS | 45.0% | |
| ACTGATATTGGATGCCGTGA+AGG | + | chr6_3:36855896-36855915 | Msa0949780:CDS | 45.0% | |
| CGTGAAGGCTTCGATTGATA+AGG | + | chr6_3:36855911-36855930 | Msa0949780:CDS | 45.0% | |
| ACAAAGATCCGAGTTCAGCA+GGG | - | chr6_3:36855989-36856008 | None:intergenic | 45.0% | |
| AACAAAGATCCGAGTTCAGC+AGG | - | chr6_3:36855990-36856009 | None:intergenic | 45.0% | |
| TGTGACGCAATTTGTCACTG+TGG | + | chr6_3:36856173-36856192 | Msa0949780:three_prime_UTR | 45.0% | |
| !!! | AAAATCATTTTTTTTATAAT+CGG | - | chr6_3:36853240-36853259 | None:intergenic | 5.0% |
| ! | TGTTTTGCGGTTTGAGGGAG+TGG | - | chr6_3:36851772-36851791 | None:intergenic | 50.0% |
| CCAATCCGTTTCGGCATTCT+CGG | + | chr6_3:36851827-36851846 | Msa0949780:CDS | 50.0% | |
| ! | TGAGAGTTTGCGGGCTATGT+CGG | - | chr6_3:36851858-36851877 | None:intergenic | 50.0% |
| ! | GTACGAGCCGTAGATTTTGG+CGG | - | chr6_3:36851981-36852000 | None:intergenic | 50.0% |
| ACATGCAACGTCGTCGGTAA+CGG | - | chr6_3:36852046-36852065 | None:intergenic | 50.0% | |
| CGACGACGTTGCATGTGAAA+TGG | + | chr6_3:36852050-36852069 | Msa0949780:CDS | 50.0% | |
| GACGTTGCATGTGAAATGGG+CGG | + | chr6_3:36852054-36852073 | Msa0949780:CDS | 50.0% | |
| ! | TGTTTTGCTTGAGAAGCCGG+TGG | + | chr6_3:36852102-36852121 | Msa0949780:CDS | 50.0% |
| ! | TGAAGGTGTGTGAGGAGTGT+GGG | + | chr6_3:36852155-36852174 | Msa0949780:CDS | 50.0% |
| TGTGGGGTGCAGTTTATGGA+TGG | + | chr6_3:36852172-36852191 | Msa0949780:CDS | 50.0% | |
| GTGGGGTGCAGTTTATGGAT+GGG | + | chr6_3:36852173-36852192 | Msa0949780:CDS | 50.0% | |
| GATGCATCATCCTAGAACGG+AGG | + | chr6_3:36852204-36852223 | Msa0949780:CDS | 50.0% | |
| TCCTAGAACGGAGGTGATGA+AGG | + | chr6_3:36852213-36852232 | Msa0949780:CDS | 50.0% | |
| CCTAGAACGGAGGTGATGAA+GGG | + | chr6_3:36852214-36852233 | Msa0949780:CDS | 50.0% | |
| CTAGAACGGAGGTGATGAAG+GGG | + | chr6_3:36852215-36852234 | Msa0949780:CDS | 50.0% | |
| ! | GGAGGTGATGAAGGGGTTTT+TGG | + | chr6_3:36852222-36852241 | Msa0949780:CDS | 50.0% |
| AGATGGGGAGAAGTTTGGGA+AGG | + | chr6_3:36852246-36852265 | Msa0949780:CDS | 50.0% | |
| CTTCGTGTCAATGTCGTGTC+AGG | - | chr6_3:36852789-36852808 | None:intergenic | 50.0% | |
| GTTTGGATTGAGGGTTTGGG+AGG | + | chr6_3:36852841-36852860 | Msa0949780:intron | 50.0% | |
| TTGGATTGAGGGTTTGGGAG+GGG | + | chr6_3:36852843-36852862 | Msa0949780:intron | 50.0% | |
| TTTGGATGGAGGGTTTGGGA+GGG | - | chr6_3:36853051-36853070 | None:intergenic | 50.0% | |
| GTGTGTTTGGATGGAGGGTT+TGG | - | chr6_3:36853056-36853075 | None:intergenic | 50.0% | |
| CTTAGGGTGTGTTTGGATGG+AGG | - | chr6_3:36853062-36853081 | None:intergenic | 50.0% | |
| GCTGTAAGCGTAAACTAGCG+AGG | - | chr6_3:36853836-36853855 | None:intergenic | 50.0% | |
| ATGCACGAGCCCATTTCATG+TGG | - | chr6_3:36854047-36854066 | None:intergenic | 50.0% | |
| CCCCCAAATCAATAGCCCAT+TGG | - | chr6_3:36854083-36854102 | None:intergenic | 50.0% | |
| ! | CTCTAAGGGAAAGGAGACCA+AGG | - | chr6_3:36854828-36854847 | None:intergenic | 50.0% |
| GTCAGTGTCTGTGTCGTGTT+TGG | - | chr6_3:36854911-36854930 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr6_3:36855059-36855078 | None:intergenic | 50.0% | |
| !! | ATTAAGCACTGGCTCGCGAT+AGG | - | chr6_3:36855508-36855527 | None:intergenic | 50.0% |
| TCTACCTCAGGAGGCTCTTA+TGG | + | chr6_3:36855785-36855804 | Msa0949780:CDS | 50.0% | |
| GTTACCATAAGAGCCTCCTG+AGG | - | chr6_3:36855792-36855811 | None:intergenic | 50.0% | |
| ACGCGAAACCGGAGAAGAAA+TGG | + | chr6_3:36855850-36855869 | Msa0949780:CDS | 50.0% | |
| GTCTTTCACCCTGCTGAACT+CGG | + | chr6_3:36855978-36855997 | Msa0949780:three_prime_UTR | 50.0% | |
| CCGAGAATGCCGAAACGGAT+TGG | - | chr6_3:36851830-36851849 | None:intergenic | 55.0% | |
| CGCAACCGAGAATGCCGAAA+CGG | - | chr6_3:36851835-36851854 | None:intergenic | 55.0% | |
| AATGGCGCGTGAGAGTTTGC+GGG | - | chr6_3:36851867-36851886 | None:intergenic | 55.0% | |
| GAATGGCGCGTGAGAGTTTG+CGG | - | chr6_3:36851868-36851887 | None:intergenic | 55.0% | |
| AGATTGTGGCGGTGGAAGAG+AGG | - | chr6_3:36851892-36851911 | None:intergenic | 55.0% | |
| !! | CGTAGATTTTGGCGGTGGGA+GGG | - | chr6_3:36851973-36851992 | None:intergenic | 55.0% |
| CCTCCCACCGCCAAAATCTA+CGG | + | chr6_3:36851971-36851990 | Msa0949780:CDS | 55.0% | |
| !! | GAGCCGTAGATTTTGGCGGT+GGG | - | chr6_3:36851977-36851996 | None:intergenic | 55.0% |
| GTTGCATGTGAAATGGGCGG+TGG | + | chr6_3:36852057-36852076 | Msa0949780:CDS | 55.0% | |
| TTTGCTTGAGAAGCCGGTGG+CGG | + | chr6_3:36852105-36852124 | Msa0949780:CDS | 55.0% | |
| TCCTTCACACTAACCGCCAC+CGG | - | chr6_3:36852121-36852140 | None:intergenic | 55.0% | |
| ! | GTGAAGGTGTGTGAGGAGTG+TGG | + | chr6_3:36852154-36852173 | Msa0949780:CDS | 55.0% |
| ! | GAAGGTGTGTGAGGAGTGTG+GGG | + | chr6_3:36852156-36852175 | Msa0949780:CDS | 55.0% |
| GGAGTGTGGGGTGCAGTTTA+TGG | + | chr6_3:36852168-36852187 | Msa0949780:CDS | 55.0% | |
| CCCTTCATCACCTCCGTTCT+AGG | - | chr6_3:36852217-36852236 | None:intergenic | 55.0% | |
| ATTGAGGGTTTGGGAGGGGA+AGG | + | chr6_3:36852847-36852866 | Msa0949780:intron | 55.0% | |
| TTGAGGGTTTGGGAGGGGAA+GGG | + | chr6_3:36852848-36852867 | Msa0949780:intron | 55.0% | |
| TTGGATGGAGGGTTTGGGAG+GGG | - | chr6_3:36853050-36853069 | None:intergenic | 55.0% | |
| GTTTGGATGGAGGGTTTGGG+AGG | - | chr6_3:36853052-36853071 | None:intergenic | 55.0% | |
| TTTGTGTGGAGGATGGGGAG+AGG | + | chr6_3:36853381-36853400 | Msa0949780:intron | 55.0% | |
| TGGAGGATGGGGAGAGGTTT+GGG | + | chr6_3:36853387-36853406 | Msa0949780:intron | 55.0% | |
| GGTTAGGCGTGTTCTCGTGT+CGG | - | chr6_3:36855037-36855056 | None:intergenic | 55.0% | |
| ATGAAGCACGGACACTCCTC+GGG | - | chr6_3:36855058-36855077 | None:intergenic | 55.0% | |
| GGCGGTGGAAGAGAGGAGAA+TGG | - | chr6_3:36851885-36851904 | None:intergenic | 60.0% | |
| !! | CCGTAGATTTTGGCGGTGGG+AGG | - | chr6_3:36851974-36851993 | None:intergenic | 60.0% |
| !! | CGAGCCGTAGATTTTGGCGG+TGG | - | chr6_3:36851978-36851997 | None:intergenic | 60.0% |
| TGTGAAATGGGCGGTGGCTG+CGG | + | chr6_3:36852063-36852082 | Msa0949780:CDS | 60.0% | |
| TGGAGGGTTTGGGAGGGGAA+GGG | - | chr6_3:36853045-36853064 | None:intergenic | 60.0% | |
| ATGGAGGGTTTGGGAGGGGA+AGG | - | chr6_3:36853046-36853065 | None:intergenic | 60.0% | |
| GTGGAGGATGGGGAGAGGTT+TGG | + | chr6_3:36853386-36853405 | Msa0949780:intron | 60.0% | |
| ACGAGAACACGCCTAACCCG+AGG | + | chr6_3:36855039-36855058 | Msa0949780:intron | 60.0% | |
| CGTCGAGATCCGGCTTCACA+CGG | - | chr6_3:36855398-36855417 | None:intergenic | 60.0% | |
| AAGCCGGATCTCGACGCTCT+TGG | + | chr6_3:36855402-36855421 | Msa0949780:CDS | 60.0% | |
| AGCCGGATCTCGACGCTCTT+GGG | + | chr6_3:36855403-36855422 | Msa0949780:CDS | 60.0% | |
| !! | GACCCAAGAGCGTCGAGATC+CGG | - | chr6_3:36855408-36855427 | None:intergenic | 60.0% |
| CTCGACGCTCTTGGGTCTCT+TGG | + | chr6_3:36855411-36855430 | Msa0949780:CDS | 60.0% | |
| CTTGGGTCTCTTGGCGACGA+AGG | + | chr6_3:36855420-36855439 | Msa0949780:CDS | 60.0% | |
| GGTCTCTTGGCGACGAAGGA+TGG | + | chr6_3:36855424-36855443 | Msa0949780:CDS | 60.0% | |
| ACCGCCACAATCTCCGCCGT+CGG | + | chr6_3:36851899-36851918 | Msa0949780:CDS | 65.0% | |
| TCCGACGGCGGAGATTGTGG+CGG | - | chr6_3:36851903-36851922 | None:intergenic | 65.0% | |
| GCTTCCGACGGCGGAGATTG+TGG | - | chr6_3:36851906-36851925 | None:intergenic | 65.0% | |
| ! | GGAGAGAGTGCGGCTTCCGA+CGG | - | chr6_3:36851918-36851937 | None:intergenic | 65.0% |
| ! | GCCGGTGGCGGTTAGTGTGA+AGG | + | chr6_3:36852117-36852136 | Msa0949780:CDS | 65.0% |
| AGGGTTTGGGAGGGGAAGGG+AGG | + | chr6_3:36852851-36852870 | Msa0949780:intron | 65.0% | |
| GGGTTTGGGAGGGGAAGGGA+GGG | + | chr6_3:36852852-36852871 | Msa0949780:intron | 65.0% | |
| GGTTTGGGAGGGGAAGGGAG+GGG | + | chr6_3:36852853-36852872 | Msa0949780:intron | 65.0% | |
| GGTTTGGGAGGGGAAGGGAG+GGG | - | chr6_3:36852853-36852872 | None:intergenic | 65.0% | |
| GGGTTTGGGAGGGGAAGGGA+GGG | - | chr6_3:36852852-36852871 | None:intergenic | 65.0% | |
| AGGGTTTGGGAGGGGAAGGG+AGG | - | chr6_3:36852851-36852870 | None:intergenic | 65.0% | |
| GGATGGGGAGAGGTTTGGGC+AGG | + | chr6_3:36853391-36853410 | Msa0949780:intron | 65.0% | |
| CTGAAACCCTGCTGCGTGCC+TGG | + | chr6_3:36854760-36854779 | Msa0949780:intron | 65.0% | |
| GAAACGCCAGGCACGCAGCA+GGG | - | chr6_3:36854769-36854788 | None:intergenic | 65.0% | |
| AGAAACGCCAGGCACGCAGC+AGG | - | chr6_3:36854770-36854789 | None:intergenic | 65.0% | |
| GCACGGACACTCCTCGGGTT+AGG | - | chr6_3:36855053-36855072 | None:intergenic | 65.0% | |
| GACGGCGGAGATTGTGGCGG+TGG | - | chr6_3:36851900-36851919 | None:intergenic | 70.0% | |
| ! | GAGAGTGCGGCTTCCGACGG+CGG | - | chr6_3:36851915-36851934 | None:intergenic | 70.0% |
| GCGGTGGCTGCGGCGAAGAA+GGG | + | chr6_3:36852073-36852092 | Msa0949780:CDS | 70.0% | |
| CGGTGGCTGCGGCGAAGAAG+GGG | + | chr6_3:36852074-36852093 | Msa0949780:CDS | 70.0% | |
| TTGGGAGGGGAAGGGAGGGG+AGG | + | chr6_3:36852856-36852875 | Msa0949780:intron | 70.0% | |
| TGGGAGGGGAAGGGAGGGGA+GGG | + | chr6_3:36852857-36852876 | Msa0949780:intron | 70.0% | |
| TGGGAGGGGAAGGGAGGGGA+GGG | - | chr6_3:36852857-36852876 | None:intergenic | 70.0% | |
| TTGGGAGGGGAAGGGAGGGG+AGG | - | chr6_3:36852856-36852875 | None:intergenic | 70.0% | |
| GGCGGTGGCTGCGGCGAAGA+AGG | + | chr6_3:36852072-36852091 | Msa0949780:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 36851762 | 36856242 | 36851762 | ID=Msa0949780;Name=Msa0949780 |
| chr6_3 | mRNA | 36851762 | 36856242 | 36851762 | ID=Msa0949780-mRNA-1;Parent=Msa0949780;Name=Msa0949780-mRNA-1;_AED=0.05;_eAED=0.05;_QI=50|0|0.5|0.5|1|1|4|280|412 |
| chr6_3 | exon | 36851762 | 36852276 | 36851762 | ID=Msa0949780-mRNA-1:exon:9043;Parent=Msa0949780-mRNA-1 |
| chr6_3 | exon | 36852665 | 36852733 | 36852665 | ID=Msa0949780-mRNA-1:exon:9044;Parent=Msa0949780-mRNA-1 |
| chr6_3 | exon | 36854276 | 36854359 | 36854276 | ID=Msa0949780-mRNA-1:exon:9045;Parent=Msa0949780-mRNA-1 |
| chr6_3 | exon | 36855342 | 36856242 | 36855342 | ID=Msa0949780-mRNA-1:exon:9046;Parent=Msa0949780-mRNA-1 |
| chr6_3 | five_prime_UTR | 36851762 | 36851811 | 36851762 | ID=Msa0949780-mRNA-1:five_prime_utr;Parent=Msa0949780-mRNA-1 |
| chr6_3 | CDS | 36851812 | 36852276 | 36851812 | ID=Msa0949780-mRNA-1:cds;Parent=Msa0949780-mRNA-1 |
| chr6_3 | CDS | 36852665 | 36852733 | 36852665 | ID=Msa0949780-mRNA-1:cds;Parent=Msa0949780-mRNA-1 |
| chr6_3 | CDS | 36854276 | 36854359 | 36854276 | ID=Msa0949780-mRNA-1:cds;Parent=Msa0949780-mRNA-1 |
| chr6_3 | CDS | 36855342 | 36855962 | 36855342 | ID=Msa0949780-mRNA-1:cds;Parent=Msa0949780-mRNA-1 |
| chr6_3 | three_prime_UTR | 36855963 | 36856242 | 36855963 | ID=Msa0949780-mRNA-1:three_prime_utr;Parent=Msa0949780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
