Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086370 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086370 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086370 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035090 | Msa1086370 | 0.818148 | 2.280132e-52 | -8.615850e-47 |
| Msa0039200 | Msa1086370 | 0.822120 | 2.806961e-53 | -8.615850e-47 |
| Msa0086820 | Msa1086370 | 0.820854 | 5.503039e-53 | -8.615850e-47 |
| Msa0087880 | Msa1086370 | 0.811143 | 8.111934e-51 | -8.615850e-47 |
| Msa0092750 | Msa1086370 | 0.832770 | 7.820400e-56 | -8.615850e-47 |
| Msa0095140 | Msa1086370 | 0.880364 | 5.832310e-70 | -8.615850e-47 |
| Msa0095180 | Msa1086370 | 0.831351 | 1.753664e-55 | -8.615850e-47 |
| Msa0095200 | Msa1086370 | 0.859147 | 5.057327e-63 | -8.615850e-47 |
| Msa0095240 | Msa1086370 | 0.855451 | 6.254258e-62 | -8.615850e-47 |
| Msa0095270 | Msa1086370 | 0.882490 | 9.973864e-71 | -8.615850e-47 |
| Msa0099830 | Msa1086370 | 0.812181 | 4.823220e-51 | -8.615850e-47 |
| Msa0606140 | Msa1086370 | 0.808871 | 2.502999e-50 | -8.615850e-47 |
| Msa0619060 | Msa1086370 | 0.801912 | 7.197078e-49 | -8.615850e-47 |
| Msa0635990 | Msa1086370 | 0.804112 | 2.526107e-49 | -8.615850e-47 |
| Msa0640880 | Msa1086370 | 0.803259 | 3.795780e-49 | -8.615850e-47 |
| Msa0647110 | Msa1086370 | 0.802734 | 4.874386e-49 | -8.615850e-47 |
| Msa0654060 | Msa1086370 | 0.809117 | 2.217502e-50 | -8.615850e-47 |
| Msa0662850 | Msa1086370 | 0.811226 | 7.782880e-51 | -8.615850e-47 |
| Msa0668630 | Msa1086370 | 0.810360 | 1.198087e-50 | -8.615850e-47 |
| Msa0686610 | Msa1086370 | 0.801042 | 1.085275e-48 | -8.615850e-47 |
| Msa0702070 | Msa1086370 | 0.806293 | 8.826386e-50 | -8.615850e-47 |
| Msa0706710 | Msa1086370 | 0.807437 | 5.057552e-50 | -8.615850e-47 |
| Msa0716670 | Msa1086370 | 0.802398 | 5.718585e-49 | -8.615850e-47 |
| Msa0727020 | Msa1086370 | 0.837523 | 4.942934e-57 | -8.615850e-47 |
| Msa0736930 | Msa1086370 | 0.811291 | 7.533684e-51 | -8.615850e-47 |
| Msa0766880 | Msa1086370 | 0.837014 | 6.672444e-57 | -8.615850e-47 |
| Msa0772210 | Msa1086370 | 0.835624 | 1.506036e-56 | -8.615850e-47 |
| Msa0782330 | Msa1086370 | 0.809878 | 1.522284e-50 | -8.615850e-47 |
| Msa0804930 | Msa1086370 | 0.822011 | 2.975985e-53 | -8.615850e-47 |
| Msa0130120 | Msa1086370 | 0.808795 | 2.598276e-50 | -8.615850e-47 |
| Msa0133670 | Msa1086370 | 0.826025 | 3.400967e-54 | -8.615850e-47 |
| Msa0133880 | Msa1086370 | 0.827891 | 1.217663e-54 | -8.615850e-47 |
| Msa0134550 | Msa1086370 | 0.800242 | 1.580050e-48 | -8.615850e-47 |
| Msa0139740 | Msa1086370 | 0.812091 | 5.047278e-51 | -8.615850e-47 |
| Msa0141670 | Msa1086370 | 0.821418 | 4.080204e-53 | -8.615850e-47 |
| Msa0156780 | Msa1086370 | 0.815318 | 9.832630e-52 | -8.615850e-47 |
| Msa0175900 | Msa1086370 | 0.828006 | 1.142290e-54 | -8.615850e-47 |
| Msa0180980 | Msa1086370 | 0.814198 | 1.741097e-51 | -8.615850e-47 |
| Msa0184120 | Msa1086370 | 0.825200 | 5.334990e-54 | -8.615850e-47 |
| Msa0190000 | Msa1086370 | 0.816239 | 6.125363e-52 | -8.615850e-47 |
| Msa0221860 | Msa1086370 | 0.854456 | 1.215812e-61 | -8.615850e-47 |
| Msa0222070 | Msa1086370 | 0.825260 | 5.164799e-54 | -8.615850e-47 |
| Msa0222120 | Msa1086370 | 0.822850 | 1.900092e-53 | -8.615850e-47 |
| Msa0227290 | Msa1086370 | 0.820611 | 6.259917e-53 | -8.615850e-47 |
| Msa0365150 | Msa1086370 | 0.815140 | 1.076542e-51 | -8.615850e-47 |
| Msa0377460 | Msa1086370 | 0.802354 | 5.836962e-49 | -8.615850e-47 |
| Msa0380420 | Msa1086370 | 0.805018 | 1.634834e-49 | -8.615850e-47 |
| Msa0392450 | Msa1086370 | 0.820095 | 8.219436e-53 | -8.615850e-47 |
| Msa0392480 | Msa1086370 | 0.808214 | 3.457181e-50 | -8.615850e-47 |
| Msa0417630 | Msa1086370 | 0.812212 | 4.749122e-51 | -8.615850e-47 |
| Msa0427050 | Msa1086370 | 0.822023 | 2.956364e-53 | -8.615850e-47 |
| Msa0449930 | Msa1086370 | 0.816300 | 5.935997e-52 | -8.615850e-47 |
| Msa0473450 | Msa1086370 | 0.823459 | 1.369515e-53 | -8.615850e-47 |
| Msa0482020 | Msa1086370 | 0.801768 | 7.706014e-49 | -8.615850e-47 |
| Msa0983670 | Msa1086370 | 0.843455 | 1.386640e-58 | -8.615850e-47 |
| Msa0983710 | Msa1086370 | 0.837195 | 5.998934e-57 | -8.615850e-47 |
| Msa0992570 | Msa1086370 | 0.812164 | 4.866241e-51 | -8.615850e-47 |
| Msa0992590 | Msa1086370 | 0.818903 | 1.537214e-52 | -8.615850e-47 |
| Msa1002040 | Msa1086370 | 0.819204 | 1.313007e-52 | -8.615850e-47 |
| Msa1024580 | Msa1086370 | 0.819087 | 1.396203e-52 | -8.615850e-47 |
| Msa1030280 | Msa1086370 | 0.820990 | 5.121280e-53 | -8.615850e-47 |
| Msa1033160 | Msa1086370 | 0.800742 | 1.249741e-48 | -8.615850e-47 |
| Msa1040770 | Msa1086370 | 0.805448 | 1.328629e-49 | -8.615850e-47 |
| Msa1049440 | Msa1086370 | 0.814625 | 1.400743e-51 | -8.615850e-47 |
| Msa1063180 | Msa1086370 | 0.802116 | 6.536567e-49 | -8.615850e-47 |
| Msa1070900 | Msa1086370 | 0.806606 | 7.581020e-50 | -8.615850e-47 |
| Msa1079610 | Msa1086370 | 0.810850 | 9.387510e-51 | -8.615850e-47 |
| Msa1086020 | Msa1086370 | 0.869207 | 3.680956e-66 | -8.615850e-47 |
| Msa1086060 | Msa1086370 | 0.910301 | 2.183666e-82 | -8.615850e-47 |
| Msa1086160 | Msa1086370 | 0.880029 | 7.684431e-70 | -8.615850e-47 |
| Msa1086170 | Msa1086370 | 0.919022 | 7.560960e-87 | -8.615850e-47 |
| Msa1086260 | Msa1086370 | 0.834794 | 2.438479e-56 | -8.615850e-47 |
| Msa1086290 | Msa1086370 | 0.911335 | 6.832717e-83 | -8.615850e-47 |
| Msa1086330 | Msa1086370 | 0.848323 | 6.595447e-60 | -8.615850e-47 |
| Msa1086340 | Msa1086370 | 0.858112 | 1.029876e-62 | -8.615850e-47 |
| Msa1086370 | Msa1086410 | 0.818645 | 1.759428e-52 | -8.615850e-47 |
| Msa1086370 | Msa1086440 | 0.866829 | 2.140804e-65 | -8.615850e-47 |
| Msa1086370 | Msa1086480 | 0.891099 | 5.408391e-74 | -8.615850e-47 |
| Msa1086370 | Msa1086520 | 0.856441 | 3.210364e-62 | -8.615850e-47 |
| Msa1086370 | Msa1086630 | 0.868079 | 8.524488e-66 | -8.615850e-47 |
| Msa1086370 | Msa1086690 | 0.864626 | 1.061781e-64 | -8.615850e-47 |
| Msa1086370 | Msa1086830 | 0.864770 | 9.570250e-65 | -8.615850e-47 |
| Msa1086370 | Msa1086870 | 0.909709 | 4.217176e-82 | -8.615850e-47 |
| Msa1086370 | Msa1087000 | 0.827725 | 1.335105e-54 | -8.615850e-47 |
| Msa1086370 | Msa1090230 | 0.830721 | 2.504337e-55 | -8.615850e-47 |
| Msa1086370 | Msa1091690 | 0.849214 | 3.732119e-60 | -8.615850e-47 |
| Msa1086370 | Msa1120540 | 0.812231 | 4.704664e-51 | -8.615850e-47 |
| Msa1086370 | Msa1123340 | 0.803725 | 3.039735e-49 | -8.615850e-47 |
| Msa1086370 | Msa1124440 | 0.812654 | 3.802583e-51 | -8.615850e-47 |
| Msa1086370 | Msa1128350 | 0.805687 | 1.183325e-49 | -8.615850e-47 |
| Msa1086370 | Msa1143140 | 0.886434 | 3.430735e-72 | -8.615850e-47 |
| Msa1086370 | Msa1143150 | 0.857140 | 1.999343e-62 | -8.615850e-47 |
| Msa1086370 | Msa1157160 | 0.818594 | 1.806912e-52 | -8.615850e-47 |
| Msa1086370 | Msa1166180 | 0.815398 | 9.434186e-52 | -8.615850e-47 |
| Msa1086370 | Msa1166280 | 0.816295 | 5.951558e-52 | -8.615850e-47 |
| Msa1086370 | Msa1195860 | 0.822394 | 2.425039e-53 | -8.615850e-47 |
| Msa1086370 | Msa1199690 | 0.804707 | 1.898330e-49 | -8.615850e-47 |
| Msa1086370 | Msa1209390 | 0.806587 | 7.651368e-50 | -8.615850e-47 |
| Msa1086370 | Msa1220740 | 0.814749 | 1.314702e-51 | -8.615850e-47 |
| Msa1086370 | Msa1248400 | 0.810856 | 9.361880e-51 | -8.615850e-47 |
| Msa1086370 | Msa1298740 | 0.812786 | 3.557481e-51 | -8.615850e-47 |
| Msa1086370 | Msa1300880 | 0.803245 | 3.821863e-49 | -8.615850e-47 |
| Msa1086370 | Msa1305080 | 0.801428 | 9.046002e-49 | -8.615850e-47 |
| Msa1086370 | Msa1309910 | 0.812135 | 4.936062e-51 | -8.615850e-47 |
| Msa1086370 | Msa1323060 | 0.804142 | 2.489974e-49 | -8.615850e-47 |
| Msa1086370 | Msa1327820 | 0.826752 | 2.282582e-54 | -8.615850e-47 |
| Msa1086370 | Msa1334650 | 0.811236 | 7.744968e-51 | -8.615850e-47 |
| Msa1086370 | Msa1342030 | 0.802335 | 5.890804e-49 | -8.615850e-47 |
| Msa1086370 | Msa1352820 | 0.810458 | 1.141470e-50 | -8.615850e-47 |
| Msa1086370 | Msa1354850 | 0.870670 | 1.224893e-66 | -8.615850e-47 |
| Msa1086370 | Msa1354890 | 0.880907 | 3.726386e-70 | -8.615850e-47 |
| Msa1086370 | Msa1355020 | 0.865477 | 5.741590e-65 | -8.615850e-47 |
| Msa1086370 | Msa1355060 | 0.875708 | 2.490485e-68 | -8.615850e-47 |
| Msa1086370 | Msa1365210 | 0.813921 | 2.004033e-51 | -8.615850e-47 |
| Msa1086370 | Msa1371250 | 0.816250 | 6.093393e-52 | -8.615850e-47 |
| Msa1086370 | Msa1375630 | 0.805085 | 1.582658e-49 | -8.615850e-47 |
| Msa1086370 | Msa1376530 | 0.803260 | 3.794203e-49 | -8.615850e-47 |
| Msa1086370 | Msa1380540 | 0.875350 | 3.301795e-68 | -8.615850e-47 |
| Msa1086370 | Msa1380580 | 0.815509 | 8.912669e-52 | -8.615850e-47 |
| Msa1086370 | Msa1385940 | 0.820993 | 5.113964e-53 | -8.615850e-47 |
| Msa1086370 | Msa1394050 | 0.821984 | 3.018361e-53 | -8.615850e-47 |
| Msa1086370 | Msa1394090 | 0.868716 | 5.308480e-66 | -8.615850e-47 |
| Msa1086370 | Msa1394100 | 0.871948 | 4.629383e-67 | -8.615850e-47 |
| Msa1086370 | Msa1394140 | 0.892185 | 2.004471e-74 | -8.615850e-47 |
| Msa1086370 | Msa1394170 | 0.833096 | 6.487557e-56 | -8.615850e-47 |
| Msa1086370 | Msa1394240 | 0.856677 | 2.737695e-62 | -8.615850e-47 |
| Msa1086370 | Msa1394280 | 0.852848 | 3.526189e-61 | -8.615850e-47 |
| Msa1086370 | Msa1406230 | 0.802669 | 5.026217e-49 | -8.615850e-47 |
| Msa1086370 | Msa1422750 | 0.821278 | 4.396909e-53 | -8.615850e-47 |
| Msa1086370 | Msa1426870 | 0.804642 | 1.958176e-49 | -8.615850e-47 |
| Msa1086370 | Msa1435470 | 0.801536 | 8.596404e-49 | -8.615850e-47 |
| Msa1086370 | Msa1442300 | 0.802837 | 4.640976e-49 | -8.615850e-47 |
| Msa0253410 | Msa1086370 | 0.806013 | 1.010811e-49 | -8.615850e-47 |
| Msa0257130 | Msa1086370 | 0.801884 | 7.294380e-49 | -8.615850e-47 |
| Msa0263620 | Msa1086370 | 0.826271 | 2.972388e-54 | -8.615850e-47 |
| Msa0268180 | Msa1086370 | 0.918138 | 2.253900e-86 | -8.615850e-47 |
| Msa0268220 | Msa1086370 | 0.853707 | 1.999367e-61 | -8.615850e-47 |
| Msa0268340 | Msa1086370 | 0.857953 | 1.148570e-62 | -8.615850e-47 |
| Msa0268380 | Msa1086370 | 0.883349 | 4.838457e-71 | -8.615850e-47 |
| Msa0268420 | Msa1086370 | 0.904385 | 1.297471e-79 | -8.615850e-47 |
| Msa0268460 | Msa1086370 | 0.866457 | 2.810961e-65 | -8.615850e-47 |
| Msa0268500 | Msa1086370 | 0.863486 | 2.404892e-64 | -8.615850e-47 |
| Msa0268540 | Msa1086370 | 0.908454 | 1.679141e-81 | -8.615850e-47 |
| Msa0268650 | Msa1086370 | 0.897986 | 8.252791e-77 | -8.615850e-47 |
| Msa0268680 | Msa1086370 | 0.839272 | 1.749752e-57 | -8.615850e-47 |
| Msa0268690 | Msa1086370 | 0.831531 | 1.583867e-55 | -8.615850e-47 |
| Msa0268730 | Msa1086370 | 0.877570 | 5.652247e-69 | -8.615850e-47 |
| Msa0268760 | Msa1086370 | 0.816050 | 6.751937e-52 | -8.615850e-47 |
| Msa0268850 | Msa1086370 | 0.917861 | 3.167427e-86 | -8.615850e-47 |
| Msa0268900 | Msa1086370 | 0.869450 | 3.069292e-66 | -8.615850e-47 |
| Msa0268930 | Msa1086370 | 0.889882 | 1.626948e-73 | -8.615850e-47 |
| Msa0269060 | Msa1086370 | 0.910157 | 2.564734e-82 | -8.615850e-47 |
| Msa0269100 | Msa1086370 | 0.865771 | 4.636038e-65 | -8.615850e-47 |
| Msa0301460 | Msa1086370 | 0.814707 | 1.343038e-51 | -8.615850e-47 |
| Msa0301800 | Msa1086370 | 0.802401 | 5.708254e-49 | -8.615850e-47 |
| Msa0304870 | Msa1086370 | 0.818276 | 2.132653e-52 | -8.615850e-47 |
| Msa0306130 | Msa1086370 | 0.809147 | 2.184595e-50 | -8.615850e-47 |
| Msa0341260 | Msa1086370 | 0.818697 | 1.712336e-52 | -8.615850e-47 |
| Msa0344200 | Msa1086370 | 0.872053 | 4.271511e-67 | -8.615850e-47 |
| Msa0344240 | Msa1086370 | 0.820526 | 6.546377e-53 | -8.615850e-47 |
| Msa0344250 | Msa1086370 | 0.855024 | 8.323802e-62 | -8.615850e-47 |
| Msa0344290 | Msa1086370 | 0.831771 | 1.382096e-55 | -8.615850e-47 |
| Msa0487560 | Msa1086370 | 0.811621 | 6.388883e-51 | -8.615850e-47 |
| Msa0487620 | Msa1086370 | 0.806089 | 9.744439e-50 | -8.615850e-47 |
| Msa0558890 | Msa1086370 | 0.805534 | 1.274230e-49 | -8.615850e-47 |
| Msa0582530 | Msa1086370 | 0.892830 | 1.105372e-74 | -8.615850e-47 |
| Msa0582570 | Msa1086370 | 0.864905 | 8.682710e-65 | -8.615850e-47 |
| Msa0582580 | Msa1086370 | 0.881323 | 2.640523e-70 | -8.615850e-47 |
| Msa0582620 | Msa1086370 | 0.885733 | 6.301152e-72 | -8.615850e-47 |
| Msa0582710 | Msa1086370 | 0.887839 | 1.002600e-72 | -8.615850e-47 |
| Msa0582740 | Msa1086370 | 0.879826 | 9.073389e-70 | -8.615850e-47 |
| Msa0582830 | Msa1086370 | 0.869732 | 2.484429e-66 | -8.615850e-47 |
| Msa0582900 | Msa1086370 | 0.881546 | 2.193303e-70 | -8.615850e-47 |
| Msa0591370 | Msa1086370 | 0.837815 | 4.159630e-57 | -8.615850e-47 |
| Msa0601780 | Msa1086370 | 0.800005 | 1.765641e-48 | -8.615850e-47 |
| Msa0855490 | Msa1086370 | 0.813072 | 3.080002e-51 | -8.615850e-47 |
| Msa0860270 | Msa1086370 | 0.805104 | 1.568528e-49 | -8.615850e-47 |
| Msa0900320 | Msa1086370 | 0.811077 | 8.384215e-51 | -8.615850e-47 |
| Msa0910650 | Msa1086370 | 0.818213 | 2.204457e-52 | -8.615850e-47 |
| Msa0924820 | Msa1086370 | 0.838735 | 2.410747e-57 | -8.615850e-47 |
| Msa0924860 | Msa1086370 | 0.878096 | 3.702160e-69 | -8.615850e-47 |
| Msa0924890 | Msa1086370 | 0.821616 | 3.673056e-53 | -8.615850e-47 |
| Msa0925020 | Msa1086370 | 0.848444 | 6.104046e-60 | -8.615850e-47 |
| Msa0931090 | Msa1086370 | 0.879414 | 1.271163e-69 | -8.615850e-47 |
| Msa0931150 | Msa1086370 | 0.887386 | 1.493280e-72 | -8.615850e-47 |
| Msa0931200 | Msa1086370 | 0.848844 | 4.730935e-60 | -8.615850e-47 |
| Msa0931280 | Msa1086370 | 0.885630 | 6.891712e-72 | -8.615850e-47 |
| Msa0965960 | Msa1086370 | 0.800949 | 1.133570e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086370 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa1086370 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa1086370 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086370 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
| Msa1086370 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 7 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 7_2:+87354730 | None:intergenic |
| ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 7_2:-87354833 | None:intergenic |
| AATGATCCAGGACGTAATCC+TGG | 0.474800 | 7_2:+87355379 | Msa1086370:CDS |
| ATTTCTTATTCTTCACGTCC+AGG | 0.484075 | 7_2:-87355397 | None:intergenic |
| GGATTCCTATCTAATGATCC+AGG | 0.536202 | 7_2:+87355367 | Msa1086370:CDS |
| TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 7_2:-87355385 | None:intergenic |
| TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 7_2:-87355372 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCCAAATATTAAAATTTT+TGG | + | chr7_2:87355020-87355039 | Msa1086370:intron | 10.0% |
| !!! | TATCCAAAAATTTTAATATT+TGG | - | chr7_2:87355026-87355045 | None:intergenic | 10.0% |
| !! | ATTTCAAAAAAAAAAAACTT+AGG | - | chr7_2:87355177-87355196 | None:intergenic | 10.0% |
| !!! | AATTTTAATATTTGGAATCA+AGG | - | chr7_2:87355018-87355037 | None:intergenic | 15.0% |
| !! | GAAAAAACTACTTGAATAAA+GGG | - | chr7_2:87354777-87354796 | None:intergenic | 20.0% |
| !! | AGAAAAAACTACTTGAATAA+AGG | - | chr7_2:87354778-87354797 | None:intergenic | 20.0% |
| !!! | TTATTCAAGTAGTTTTTTCT+TGG | + | chr7_2:87354778-87354797 | Msa1086370:CDS | 20.0% |
| !! | TGAAAATTCTATTATTCGAT+TGG | + | chr7_2:87355064-87355083 | Msa1086370:intron | 20.0% |
| !!! | TGTGGATATGAAAAAAATTT+TGG | + | chr7_2:87355115-87355134 | Msa1086370:intron | 20.0% |
| !! | TCTTATAAACTTAGTATCAA+AGG | + | chr7_2:87355206-87355225 | Msa1086370:intron | 20.0% |
| !!! | GCGTTTTTTTTTAATTATCT+TGG | + | chr7_2:87355271-87355290 | Msa1086370:intron | 20.0% |
| !!! | TTTTTCTCTTAGCTTTTGTT+TGG | + | chr7_2:87354870-87354889 | Msa1086370:CDS | 25.0% |
| !!! | TTTGTTTCTCTTTTCATCTT+CGG | + | chr7_2:87355346-87355365 | Msa1086370:CDS | 25.0% |
| ! | AATTGGATTCAAAAAAGCGT+AGG | - | chr7_2:87354819-87354838 | None:intergenic | 30.0% |
| ACTGGCATAAAATCTACAAT+TGG | - | chr7_2:87354836-87354855 | None:intergenic | 30.0% | |
| !! | AAAAAGAGTAAGGGTATTAC+TGG | - | chr7_2:87354854-87354873 | None:intergenic | 30.0% |
| GCTAAGAGAAAAAAGAGTAA+GGG | - | chr7_2:87354863-87354882 | None:intergenic | 30.0% | |
| AGCTAAGAGAAAAAAGAGTA+AGG | - | chr7_2:87354864-87354883 | None:intergenic | 30.0% | |
| !! | AATCAAGATCTAGGTATTGG+TGG | - | chr7_2:87355096-87355115 | None:intergenic | 35.0% |
| CACAATCAAGATCTAGGTAT+TGG | - | chr7_2:87355099-87355118 | None:intergenic | 35.0% | |
| CAATACCTAGATCTTGATTG+TGG | + | chr7_2:87355097-87355116 | Msa1086370:intron | 35.0% | |
| CATATCCACAATCAAGATCT+AGG | - | chr7_2:87355105-87355124 | None:intergenic | 35.0% | |
| GAGAATCTATTCTCTTTCTC+TGG | + | chr7_2:87355249-87355268 | Msa1086370:intron | 35.0% | |
| ! | TTCAAAAAAGCGTAGGCTTC+AGG | - | chr7_2:87354812-87354831 | None:intergenic | 40.0% |
| GGATTCCTATCTAATGATCC+AGG | + | chr7_2:87355367-87355386 | Msa1086370:CDS | 40.0% | |
| TACGTCCTGGATCATTAGAT+AGG | - | chr7_2:87355375-87355394 | None:intergenic | 40.0% | |
| !! | CAAGATCTAGGTATTGGTGG+TGG | - | chr7_2:87355093-87355112 | None:intergenic | 45.0% |
| AATGATCCAGGACGTAATCC+TGG | + | chr7_2:87355379-87355398 | Msa1086370:CDS | 45.0% | |
| !!! | AATAAATTCTTAATTTTTTT+CGG | - | chr7_2:87354941-87354960 | None:intergenic | 5.0% |
| TCACGTCCAGGATTACGTCC+TGG | - | chr7_2:87355388-87355407 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87354731 | 87355414 | 87354731 | ID=Msa1086370;Name=Msa1086370 |
| chr7_2 | mRNA | 87354731 | 87355414 | 87354731 | ID=Msa1086370-mRNA-1;Parent=Msa1086370;Name=Msa1086370-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
| chr7_2 | exon | 87354731 | 87354905 | 87354731 | ID=Msa1086370-mRNA-1:exon:23779;Parent=Msa1086370-mRNA-1 |
| chr7_2 | exon | 87355296 | 87355414 | 87355296 | ID=Msa1086370-mRNA-1:exon:23780;Parent=Msa1086370-mRNA-1 |
| chr7_2 | CDS | 87354731 | 87354905 | 87354731 | ID=Msa1086370-mRNA-1:cds;Parent=Msa1086370-mRNA-1 |
| chr7_2 | CDS | 87355296 | 87355414 | 87355296 | ID=Msa1086370-mRNA-1:cds;Parent=Msa1086370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
