Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086870 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086870 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086870 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017120 | Msa1086870 | 0.814127 | 1.804601e-51 | -8.615850e-47 |
| Msa0035090 | Msa1086870 | 0.824634 | 7.258389e-54 | -8.615850e-47 |
| Msa0039200 | Msa1086870 | 0.828403 | 9.168226e-55 | -8.615850e-47 |
| Msa0065390 | Msa1086870 | 0.815072 | 1.114965e-51 | -8.615850e-47 |
| Msa0083570 | Msa1086870 | 0.815161 | 1.065419e-51 | -8.615850e-47 |
| Msa0086820 | Msa1086870 | 0.828905 | 6.930704e-55 | -8.615850e-47 |
| Msa0087880 | Msa1086870 | 0.807173 | 5.751151e-50 | -8.615850e-47 |
| Msa0092750 | Msa1086870 | 0.816753 | 4.699387e-52 | -8.615850e-47 |
| Msa0095140 | Msa1086870 | 0.872311 | 3.504815e-67 | -8.615850e-47 |
| Msa0095180 | Msa1086870 | 0.812819 | 3.500047e-51 | -8.615850e-47 |
| Msa0095200 | Msa1086870 | 0.836363 | 9.775613e-57 | -8.615850e-47 |
| Msa0095240 | Msa1086870 | 0.854697 | 1.035896e-61 | -8.615850e-47 |
| Msa0095270 | Msa1086870 | 0.868358 | 6.927717e-66 | -8.615850e-47 |
| Msa0095300 | Msa1086870 | 0.815589 | 8.554758e-52 | -8.615850e-47 |
| Msa0099830 | Msa1086870 | 0.805139 | 1.541837e-49 | -8.615850e-47 |
| Msa0102410 | Msa1086870 | 0.801508 | 8.711903e-49 | -8.615850e-47 |
| Msa0103780 | Msa1086870 | 0.819367 | 1.205356e-52 | -8.615850e-47 |
| Msa0110710 | Msa1086870 | 0.816729 | 4.759990e-52 | -8.615850e-47 |
| Msa0606060 | Msa1086870 | 0.811767 | 5.937177e-51 | -8.615850e-47 |
| Msa0606140 | Msa1086870 | 0.803338 | 3.656462e-49 | -8.615850e-47 |
| Msa0619060 | Msa1086870 | 0.805775 | 1.134329e-49 | -8.615850e-47 |
| Msa0619330 | Msa1086870 | 0.810176 | 1.312665e-50 | -8.615850e-47 |
| Msa0622390 | Msa1086870 | 0.803543 | 3.316301e-49 | -8.615850e-47 |
| Msa0626890 | Msa1086870 | 0.802028 | 6.813370e-49 | -8.615850e-47 |
| Msa0635990 | Msa1086870 | 0.815566 | 8.656122e-52 | -8.615850e-47 |
| Msa0640880 | Msa1086870 | 0.817639 | 2.971169e-52 | -8.615850e-47 |
| Msa0642910 | Msa1086870 | 0.818376 | 2.024230e-52 | -8.615850e-47 |
| Msa0647110 | Msa1086870 | 0.808345 | 3.241560e-50 | -8.615850e-47 |
| Msa0654060 | Msa1086870 | 0.803042 | 4.210285e-49 | -8.615850e-47 |
| Msa0662850 | Msa1086870 | 0.806103 | 9.679443e-50 | -8.615850e-47 |
| Msa0668630 | Msa1086870 | 0.817885 | 2.613812e-52 | -8.615850e-47 |
| Msa0681890 | Msa1086870 | 0.814721 | 1.333377e-51 | -8.615850e-47 |
| Msa0686610 | Msa1086870 | 0.817774 | 2.769340e-52 | -8.615850e-47 |
| Msa0702070 | Msa1086870 | 0.810041 | 1.403950e-50 | -8.615850e-47 |
| Msa0702120 | Msa1086870 | 0.804426 | 2.172251e-49 | -8.615850e-47 |
| Msa0704570 | Msa1086870 | 0.805511 | 1.288383e-49 | -8.615850e-47 |
| Msa0705030 | Msa1086870 | 0.812709 | 3.698294e-51 | -8.615850e-47 |
| Msa0727020 | Msa1086870 | 0.821203 | 4.574840e-53 | -8.615850e-47 |
| Msa0739570 | Msa1086870 | 0.811309 | 7.466224e-51 | -8.615850e-47 |
| Msa0744450 | Msa1086870 | 0.803642 | 3.162874e-49 | -8.615850e-47 |
| Msa0766880 | Msa1086870 | 0.849229 | 3.697201e-60 | -8.615850e-47 |
| Msa0772210 | Msa1086870 | 0.844089 | 9.380888e-59 | -8.615850e-47 |
| Msa0782330 | Msa1086870 | 0.825229 | 5.252883e-54 | -8.615850e-47 |
| Msa0796450 | Msa1086870 | 0.803874 | 2.830484e-49 | -8.615850e-47 |
| Msa0804930 | Msa1086870 | 0.818539 | 1.859603e-52 | -8.615850e-47 |
| Msa0821490 | Msa1086870 | 0.803767 | 2.978673e-49 | -8.615850e-47 |
| Msa0123940 | Msa1086870 | 0.810049 | 1.397993e-50 | -8.615850e-47 |
| Msa0130120 | Msa1086870 | 0.828027 | 1.129099e-54 | -8.615850e-47 |
| Msa0133670 | Msa1086870 | 0.830887 | 2.280245e-55 | -8.615850e-47 |
| Msa0133880 | Msa1086870 | 0.832954 | 7.038291e-56 | -8.615850e-47 |
| Msa0139740 | Msa1086870 | 0.824947 | 6.123711e-54 | -8.615850e-47 |
| Msa0141670 | Msa1086870 | 0.826271 | 2.972724e-54 | -8.615850e-47 |
| Msa0143490 | Msa1086870 | 0.803120 | 4.055719e-49 | -8.615850e-47 |
| Msa0156780 | Msa1086870 | 0.810583 | 1.072219e-50 | -8.615850e-47 |
| Msa0157020 | Msa1086870 | 0.815597 | 8.519791e-52 | -8.615850e-47 |
| Msa0175900 | Msa1086870 | 0.826881 | 2.126539e-54 | -8.615850e-47 |
| Msa0180980 | Msa1086870 | 0.824781 | 6.703116e-54 | -8.615850e-47 |
| Msa0184120 | Msa1086870 | 0.828692 | 7.805025e-55 | -8.615850e-47 |
| Msa0190000 | Msa1086870 | 0.809108 | 2.227420e-50 | -8.615850e-47 |
| Msa0202630 | Msa1086870 | 0.810896 | 9.175272e-51 | -8.615850e-47 |
| Msa0221860 | Msa1086870 | 0.849374 | 3.368676e-60 | -8.615850e-47 |
| Msa0222070 | Msa1086870 | 0.827769 | 1.303084e-54 | -8.615850e-47 |
| Msa0222120 | Msa1086870 | 0.824350 | 8.463787e-54 | -8.615850e-47 |
| Msa0224960 | Msa1086870 | 0.810074 | 1.381312e-50 | -8.615850e-47 |
| Msa0225010 | Msa1086870 | 0.810700 | 1.011619e-50 | -8.615850e-47 |
| Msa0227290 | Msa1086870 | 0.817681 | 2.906244e-52 | -8.615850e-47 |
| Msa0365150 | Msa1086870 | 0.805637 | 1.212465e-49 | -8.615850e-47 |
| Msa0377460 | Msa1086870 | 0.806456 | 8.155954e-50 | -8.615850e-47 |
| Msa0380420 | Msa1086870 | 0.809768 | 1.606860e-50 | -8.615850e-47 |
| Msa0392410 | Msa1086870 | 0.800349 | 1.502408e-48 | -8.615850e-47 |
| Msa0392450 | Msa1086870 | 0.814507 | 1.487179e-51 | -8.615850e-47 |
| Msa0392480 | Msa1086870 | 0.804035 | 2.620632e-49 | -8.615850e-47 |
| Msa0417630 | Msa1086870 | 0.827428 | 1.573446e-54 | -8.615850e-47 |
| Msa0426860 | Msa1086870 | 0.817658 | 2.941948e-52 | -8.615850e-47 |
| Msa0426890 | Msa1086870 | 0.804581 | 2.017197e-49 | -8.615850e-47 |
| Msa0427050 | Msa1086870 | 0.833821 | 4.279309e-56 | -8.615850e-47 |
| Msa0449930 | Msa1086870 | 0.822222 | 2.658914e-53 | -8.615850e-47 |
| Msa0464500 | Msa1086870 | 0.801742 | 7.799476e-49 | -8.615850e-47 |
| Msa0467800 | Msa1086870 | 0.801697 | 7.969383e-49 | -8.615850e-47 |
| Msa0473450 | Msa1086870 | 0.818784 | 1.636233e-52 | -8.615850e-47 |
| Msa0983670 | Msa1086870 | 0.843664 | 1.219416e-58 | -8.615850e-47 |
| Msa0983710 | Msa1086870 | 0.842956 | 1.883150e-58 | -8.615850e-47 |
| Msa0992570 | Msa1086870 | 0.817436 | 3.301153e-52 | -8.615850e-47 |
| Msa0992590 | Msa1086870 | 0.812696 | 3.722235e-51 | -8.615850e-47 |
| Msa1002040 | Msa1086870 | 0.815895 | 7.312974e-52 | -8.615850e-47 |
| Msa1024580 | Msa1086870 | 0.820848 | 5.521277e-53 | -8.615850e-47 |
| Msa1030280 | Msa1086870 | 0.828689 | 7.818572e-55 | -8.615850e-47 |
| Msa1040770 | Msa1086870 | 0.820806 | 5.645867e-53 | -8.615850e-47 |
| Msa1049440 | Msa1086870 | 0.825391 | 4.809661e-54 | -8.615850e-47 |
| Msa1079610 | Msa1086870 | 0.803202 | 3.901369e-49 | -8.615850e-47 |
| Msa1086020 | Msa1086870 | 0.850483 | 1.649462e-60 | -8.615850e-47 |
| Msa1086060 | Msa1086870 | 0.899912 | 1.237618e-77 | -8.615850e-47 |
| Msa1086160 | Msa1086870 | 0.890107 | 1.328346e-73 | -8.615850e-47 |
| Msa1086170 | Msa1086870 | 0.902330 | 1.082579e-78 | -8.615850e-47 |
| Msa1086260 | Msa1086870 | 0.825803 | 3.841393e-54 | -8.615850e-47 |
| Msa1086290 | Msa1086870 | 0.872037 | 4.326451e-67 | -8.615850e-47 |
| Msa1086330 | Msa1086870 | 0.831347 | 1.757221e-55 | -8.615850e-47 |
| Msa1086340 | Msa1086870 | 0.829930 | 3.908118e-55 | -8.615850e-47 |
| Msa1086370 | Msa1086870 | 0.909709 | 4.217176e-82 | -8.615850e-47 |
| Msa1086440 | Msa1086870 | 0.899102 | 2.762071e-77 | -8.615850e-47 |
| Msa1086480 | Msa1086870 | 0.868078 | 8.525718e-66 | -8.615850e-47 |
| Msa1086520 | Msa1086870 | 0.841817 | 3.775468e-58 | -8.615850e-47 |
| Msa1086630 | Msa1086870 | 0.852191 | 5.426450e-61 | -8.615850e-47 |
| Msa1086690 | Msa1086870 | 0.849132 | 3.935254e-60 | -8.615850e-47 |
| Msa1086830 | Msa1086870 | 0.844842 | 5.884212e-59 | -8.615850e-47 |
| Msa1086870 | Msa1087000 | 0.808206 | 3.469921e-50 | -8.615850e-47 |
| Msa1086870 | Msa1090230 | 0.824476 | 7.905438e-54 | -8.615850e-47 |
| Msa1086870 | Msa1091690 | 0.864270 | 1.372100e-64 | -8.615850e-47 |
| Msa1086870 | Msa1120540 | 0.804414 | 2.184767e-49 | -8.615850e-47 |
| Msa1086870 | Msa1123340 | 0.814184 | 1.752733e-51 | -8.615850e-47 |
| Msa1086870 | Msa1124440 | 0.815023 | 1.142978e-51 | -8.615850e-47 |
| Msa1086870 | Msa1128350 | 0.807353 | 5.269800e-50 | -8.615850e-47 |
| Msa1086870 | Msa1132540 | 0.804001 | 2.664126e-49 | -8.615850e-47 |
| Msa1086870 | Msa1143140 | 0.868400 | 6.716715e-66 | -8.615850e-47 |
| Msa1086870 | Msa1143150 | 0.825076 | 5.710387e-54 | -8.615850e-47 |
| Msa1086870 | Msa1157160 | 0.822762 | 1.991812e-53 | -8.615850e-47 |
| Msa1086870 | Msa1166180 | 0.821341 | 4.250588e-53 | -8.615850e-47 |
| Msa1086870 | Msa1166280 | 0.820857 | 5.495523e-53 | -8.615850e-47 |
| Msa1086870 | Msa1195860 | 0.809789 | 1.590188e-50 | -8.615850e-47 |
| Msa1086870 | Msa1213540 | 0.808797 | 2.595332e-50 | -8.615850e-47 |
| Msa1086870 | Msa1220740 | 0.814311 | 1.643617e-51 | -8.615850e-47 |
| Msa1086870 | Msa1248400 | 0.801338 | 9.437870e-49 | -8.615850e-47 |
| Msa1086870 | Msa1252040 | 0.801082 | 1.064755e-48 | -8.615850e-47 |
| Msa1086870 | Msa1284030 | 0.807250 | 5.540119e-50 | -8.615850e-47 |
| Msa1086870 | Msa1298740 | 0.810141 | 1.336088e-50 | -8.615850e-47 |
| Msa1086870 | Msa1300880 | 0.806827 | 6.807210e-50 | -8.615850e-47 |
| Msa1086870 | Msa1305080 | 0.807174 | 5.748919e-50 | -8.615850e-47 |
| Msa1086870 | Msa1323060 | 0.810600 | 1.063538e-50 | -8.615850e-47 |
| Msa1086870 | Msa1325650 | 0.803033 | 4.228187e-49 | -8.615850e-47 |
| Msa1086870 | Msa1327820 | 0.821325 | 4.287954e-53 | -8.615850e-47 |
| Msa1086870 | Msa1334650 | 0.809320 | 2.006231e-50 | -8.615850e-47 |
| Msa1086870 | Msa1342030 | 0.817852 | 2.659285e-52 | -8.615850e-47 |
| Msa1086870 | Msa1352820 | 0.820047 | 8.432422e-53 | -8.615850e-47 |
| Msa1086870 | Msa1354850 | 0.860282 | 2.302859e-63 | -8.615850e-47 |
| Msa1086870 | Msa1354890 | 0.870225 | 1.713304e-66 | -8.615850e-47 |
| Msa1086870 | Msa1355020 | 0.857217 | 1.897371e-62 | -8.615850e-47 |
| Msa1086870 | Msa1355060 | 0.880107 | 7.206282e-70 | -8.615850e-47 |
| Msa1086870 | Msa1365210 | 0.817556 | 3.101264e-52 | -8.615850e-47 |
| Msa1086870 | Msa1367810 | 0.802794 | 4.737603e-49 | -8.615850e-47 |
| Msa1086870 | Msa1367940 | 0.809655 | 1.699343e-50 | -8.615850e-47 |
| Msa1086870 | Msa1371250 | 0.803400 | 3.549769e-49 | -8.615850e-47 |
| Msa1086870 | Msa1375630 | 0.810471 | 1.133999e-50 | -8.615850e-47 |
| Msa1086870 | Msa1376530 | 0.813514 | 2.463241e-51 | -8.615850e-47 |
| Msa1086870 | Msa1380540 | 0.857235 | 1.873826e-62 | -8.615850e-47 |
| Msa1086870 | Msa1380580 | 0.800195 | 1.615269e-48 | -8.615850e-47 |
| Msa1086870 | Msa1385940 | 0.829766 | 4.282739e-55 | -8.615850e-47 |
| Msa1086870 | Msa1387090 | 0.825279 | 5.110888e-54 | -8.615850e-47 |
| Msa1086870 | Msa1394050 | 0.826075 | 3.309814e-54 | -8.615850e-47 |
| Msa1086870 | Msa1394090 | 0.855884 | 4.675025e-62 | -8.615850e-47 |
| Msa1086870 | Msa1394100 | 0.858369 | 8.639980e-63 | -8.615850e-47 |
| Msa1086870 | Msa1394140 | 0.871822 | 5.097313e-67 | -8.615850e-47 |
| Msa1086870 | Msa1394170 | 0.815635 | 8.355635e-52 | -8.615850e-47 |
| Msa1086870 | Msa1394240 | 0.846227 | 2.479192e-59 | -8.615850e-47 |
| Msa1086870 | Msa1394280 | 0.852767 | 3.718324e-61 | -8.615850e-47 |
| Msa1086870 | Msa1405770 | 0.814272 | 1.676018e-51 | -8.615850e-47 |
| Msa1086870 | Msa1406230 | 0.818998 | 1.462373e-52 | -8.615850e-47 |
| Msa1086870 | Msa1407710 | 0.800430 | 1.446677e-48 | -8.615850e-47 |
| Msa1086870 | Msa1410170 | 0.802294 | 6.006499e-49 | -8.615850e-47 |
| Msa1086870 | Msa1415120 | 0.824467 | 7.943853e-54 | -8.615850e-47 |
| Msa1086870 | Msa1422750 | 0.814745 | 1.317743e-51 | -8.615850e-47 |
| Msa1086870 | Msa1426870 | 0.823610 | 1.262765e-53 | -8.615850e-47 |
| Msa1086870 | Msa1439800 | 0.806076 | 9.805813e-50 | -8.615850e-47 |
| Msa0253410 | Msa1086870 | 0.822669 | 2.093734e-53 | -8.615850e-47 |
| Msa0257130 | Msa1086870 | 0.821571 | 3.762827e-53 | -8.615850e-47 |
| Msa0263620 | Msa1086870 | 0.824235 | 9.010060e-54 | -8.615850e-47 |
| Msa0268180 | Msa1086870 | 0.897670 | 1.123032e-76 | -8.615850e-47 |
| Msa0268220 | Msa1086870 | 0.831654 | 1.476832e-55 | -8.615850e-47 |
| Msa0268340 | Msa1086870 | 0.835170 | 1.960985e-56 | -8.615850e-47 |
| Msa0268380 | Msa1086870 | 0.882762 | 7.936466e-71 | -8.615850e-47 |
| Msa0268420 | Msa1086870 | 0.894526 | 2.269190e-75 | -8.615850e-47 |
| Msa0268460 | Msa1086870 | 0.850170 | 2.019384e-60 | -8.615850e-47 |
| Msa0268500 | Msa1086870 | 0.845579 | 3.719814e-59 | -8.615850e-47 |
| Msa0268540 | Msa1086870 | 0.876217 | 1.663771e-68 | -8.615850e-47 |
| Msa0268650 | Msa1086870 | 0.881641 | 2.028061e-70 | -8.615850e-47 |
| Msa0268680 | Msa1086870 | 0.818882 | 1.554274e-52 | -8.615850e-47 |
| Msa0268690 | Msa1086870 | 0.810555 | 1.087757e-50 | -8.615850e-47 |
| Msa0268730 | Msa1086870 | 0.882321 | 1.148678e-70 | -8.615850e-47 |
| Msa0268760 | Msa1086870 | 0.803236 | 3.838968e-49 | -8.615850e-47 |
| Msa0268850 | Msa1086870 | 0.877452 | 6.213316e-69 | -8.615850e-47 |
| Msa0268900 | Msa1086870 | 0.847391 | 1.191206e-59 | -8.615850e-47 |
| Msa0268930 | Msa1086870 | 0.890708 | 7.715697e-74 | -8.615850e-47 |
| Msa0269060 | Msa1086870 | 0.899031 | 2.961951e-77 | -8.615850e-47 |
| Msa0269100 | Msa1086870 | 0.851514 | 8.444863e-61 | -8.615850e-47 |
| Msa0284260 | Msa1086870 | 0.806368 | 8.511470e-50 | -8.615850e-47 |
| Msa0301460 | Msa1086870 | 0.804124 | 2.511279e-49 | -8.615850e-47 |
| Msa0304870 | Msa1086870 | 0.818458 | 1.939349e-52 | -8.615850e-47 |
| Msa0306130 | Msa1086870 | 0.825678 | 4.112745e-54 | -8.615850e-47 |
| Msa0341260 | Msa1086870 | 0.820894 | 5.390086e-53 | -8.615850e-47 |
| Msa0344200 | Msa1086870 | 0.865538 | 5.491156e-65 | -8.615850e-47 |
| Msa0344240 | Msa1086870 | 0.834103 | 3.637926e-56 | -8.615850e-47 |
| Msa0344250 | Msa1086870 | 0.831742 | 1.405015e-55 | -8.615850e-47 |
| Msa0344290 | Msa1086870 | 0.814897 | 1.218845e-51 | -8.615850e-47 |
| Msa0487560 | Msa1086870 | 0.810462 | 1.138736e-50 | -8.615850e-47 |
| Msa0487620 | Msa1086870 | 0.801637 | 8.198096e-49 | -8.615850e-47 |
| Msa0517400 | Msa1086870 | 0.804869 | 1.755929e-49 | -8.615850e-47 |
| Msa0547050 | Msa1086870 | 0.812829 | 3.481819e-51 | -8.615850e-47 |
| Msa0558890 | Msa1086870 | 0.813148 | 2.964348e-51 | -8.615850e-47 |
| Msa0582530 | Msa1086870 | 0.878275 | 3.203037e-69 | -8.615850e-47 |
| Msa0582570 | Msa1086870 | 0.844073 | 9.472724e-59 | -8.615850e-47 |
| Msa0582580 | Msa1086870 | 0.861988 | 6.963509e-64 | -8.615850e-47 |
| Msa0582620 | Msa1086870 | 0.883968 | 2.862224e-71 | -8.615850e-47 |
| Msa0582710 | Msa1086870 | 0.870740 | 1.161019e-66 | -8.615850e-47 |
| Msa0582740 | Msa1086870 | 0.885388 | 8.486418e-72 | -8.615850e-47 |
| Msa0582830 | Msa1086870 | 0.860204 | 2.431863e-63 | -8.615850e-47 |
| Msa0582900 | Msa1086870 | 0.889653 | 1.997802e-73 | -8.615850e-47 |
| Msa0591370 | Msa1086870 | 0.825767 | 3.916787e-54 | -8.615850e-47 |
| Msa0595780 | Msa1086870 | 0.813426 | 2.575088e-51 | -8.615850e-47 |
| Msa0600390 | Msa1086870 | 0.808134 | 3.595392e-50 | -8.615850e-47 |
| Msa0601780 | Msa1086870 | 0.816725 | 4.768985e-52 | -8.615850e-47 |
| Msa0855490 | Msa1086870 | 0.817470 | 3.243723e-52 | -8.615850e-47 |
| Msa0860270 | Msa1086870 | 0.816133 | 6.470074e-52 | -8.615850e-47 |
| Msa0910650 | Msa1086870 | 0.817682 | 2.905210e-52 | -8.615850e-47 |
| Msa0924820 | Msa1086870 | 0.827950 | 1.178412e-54 | -8.615850e-47 |
| Msa0924860 | Msa1086870 | 0.852812 | 3.610414e-61 | -8.615850e-47 |
| Msa0924890 | Msa1086870 | 0.804512 | 2.084633e-49 | -8.615850e-47 |
| Msa0925020 | Msa1086870 | 0.838350 | 3.029530e-57 | -8.615850e-47 |
| Msa0930160 | Msa1086870 | 0.801564 | 8.484659e-49 | -8.615850e-47 |
| Msa0931090 | Msa1086870 | 0.855871 | 4.714582e-62 | -8.615850e-47 |
| Msa0931150 | Msa1086870 | 0.858883 | 6.065520e-63 | -8.615850e-47 |
| Msa0931200 | Msa1086870 | 0.843128 | 1.695211e-58 | -8.615850e-47 |
| Msa0931280 | Msa1086870 | 0.861826 | 7.807887e-64 | -8.615850e-47 |
| Msa0955310 | Msa1086870 | 0.800641 | 1.310373e-48 | -8.615850e-47 |
| Msa0958020 | Msa1086870 | 0.805684 | 1.185163e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086870 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa1086870 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa1086870 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086870 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
| Msa1086870 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 7_2:+87603577 | None:intergenic |
| ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 7_2:-87603680 | None:intergenic |
| AATGATCCAGGACGTAATCC+TGG | 0.474800 | 7_2:+87604227 | Msa1086870:CDS |
| GGATTCCTATCTAATGATCC+AGG | 0.536202 | 7_2:+87604215 | Msa1086870:CDS |
| TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 7_2:-87604233 | None:intergenic |
| TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 7_2:-87604220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCCAAATATTAAAATTTT+TGG | + | chr7_2:87603867-87603886 | Msa1086870:intron | 10.0% |
| !!! | TATCCAAAAATTTTAATATT+TGG | - | chr7_2:87603873-87603892 | None:intergenic | 10.0% |
| !! | ATTTCAAAAAAAAAAAACTT+AGG | - | chr7_2:87604024-87604043 | None:intergenic | 10.0% |
| !!! | AATTTTAATATTTGGAATCA+AGG | - | chr7_2:87603865-87603884 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTAATTATCT+TGG | + | chr7_2:87604119-87604138 | Msa1086870:intron | 15.0% |
| !! | GAAAAAACTACTTGAATAAA+GGG | - | chr7_2:87603624-87603643 | None:intergenic | 20.0% |
| !! | AGAAAAAACTACTTGAATAA+AGG | - | chr7_2:87603625-87603644 | None:intergenic | 20.0% |
| !!! | TTATTCAAGTAGTTTTTTCT+TGG | + | chr7_2:87603625-87603644 | Msa1086870:CDS | 20.0% |
| !! | TGAAAATTCTATTATTCGAT+TGG | + | chr7_2:87603911-87603930 | Msa1086870:intron | 20.0% |
| !!! | TGTGGATATGAAAAAAATTT+TGG | + | chr7_2:87603962-87603981 | Msa1086870:intron | 20.0% |
| !! | TCTTATAAACTTAGTATCAA+AGG | + | chr7_2:87604053-87604072 | Msa1086870:intron | 20.0% |
| !!! | TTTTTCTCTTAGCTTTTGTT+TGG | + | chr7_2:87603717-87603736 | Msa1086870:CDS | 25.0% |
| !!! | TTTGTTTCTCTTTTCATCTT+CGG | + | chr7_2:87604194-87604213 | Msa1086870:CDS | 25.0% |
| ! | AATTGGATTCAAAAAAGCGT+AGG | - | chr7_2:87603666-87603685 | None:intergenic | 30.0% |
| ACTGGCATAAAATCTACAAT+TGG | - | chr7_2:87603683-87603702 | None:intergenic | 30.0% | |
| !! | AAAAAGAGTAAGGGTATTAC+TGG | - | chr7_2:87603701-87603720 | None:intergenic | 30.0% |
| GCTAAGAGAAAAAAGAGTAA+GGG | - | chr7_2:87603710-87603729 | None:intergenic | 30.0% | |
| AGCTAAGAGAAAAAAGAGTA+AGG | - | chr7_2:87603711-87603730 | None:intergenic | 30.0% | |
| !! | AATCAAGATCTAGGTATTGG+TGG | - | chr7_2:87603943-87603962 | None:intergenic | 35.0% |
| CACAATCAAGATCTAGGTAT+TGG | - | chr7_2:87603946-87603965 | None:intergenic | 35.0% | |
| CAATACCTAGATCTTGATTG+TGG | + | chr7_2:87603944-87603963 | Msa1086870:intron | 35.0% | |
| CATATCCACAATCAAGATCT+AGG | - | chr7_2:87603952-87603971 | None:intergenic | 35.0% | |
| GAGAATCTATTCTCTTTCTC+TGG | + | chr7_2:87604096-87604115 | Msa1086870:intron | 35.0% | |
| ! | TTCAAAAAAGCGTAGGCTTC+AGG | - | chr7_2:87603659-87603678 | None:intergenic | 40.0% |
| GGATTCCTATCTAATGATCC+AGG | + | chr7_2:87604215-87604234 | Msa1086870:CDS | 40.0% | |
| TACGTCCTGGATCATTAGAT+AGG | - | chr7_2:87604223-87604242 | None:intergenic | 40.0% | |
| !! | CAAGATCTAGGTATTGGTGG+TGG | - | chr7_2:87603940-87603959 | None:intergenic | 45.0% |
| AATGATCCAGGACGTAATCC+TGG | + | chr7_2:87604227-87604246 | Msa1086870:CDS | 45.0% | |
| !!! | AATAAATTCTTAATTTTTTT+CGG | - | chr7_2:87603788-87603807 | None:intergenic | 5.0% |
| TCACGTCCAGGATTACGTCC+TGG | - | chr7_2:87604236-87604255 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87603578 | 87604262 | 87603578 | ID=Msa1086870;Name=Msa1086870 |
| chr7_2 | mRNA | 87603578 | 87604262 | 87603578 | ID=Msa1086870-mRNA-1;Parent=Msa1086870;Name=Msa1086870-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
| chr7_2 | exon | 87603578 | 87603752 | 87603578 | ID=Msa1086870-mRNA-1:exon:23963;Parent=Msa1086870-mRNA-1 |
| chr7_2 | exon | 87604144 | 87604262 | 87604144 | ID=Msa1086870-mRNA-1:exon:23964;Parent=Msa1086870-mRNA-1 |
| chr7_2 | CDS | 87603578 | 87603752 | 87603578 | ID=Msa1086870-mRNA-1:cds;Parent=Msa1086870-mRNA-1 |
| chr7_2 | CDS | 87604144 | 87604262 | 87604144 | ID=Msa1086870-mRNA-1:cds;Parent=Msa1086870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
