Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268340 | YP_009141707.1 | 100.000 | 110 | 0 | 0 | 68 | 177 | 1 | 110 | 4.95e-69 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268340 | sp|P49169|RR18_PEA | 82.727 | 110 | 19 | 0 | 68 | 177 | 1 | 110 | 1.90e-54 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268340 | A0A4P8F1A6 | 100.000 | 110 | 0 | 0 | 68 | 177 | 1 | 110 | 2.36e-69 | 215 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa0268340 | 0.821552 | 3.799164e-53 | -8.615850e-47 |
| Msa0030710 | Msa0268340 | 0.816895 | 4.367370e-52 | -8.615850e-47 |
| Msa0032040 | Msa0268340 | 0.825465 | 4.618777e-54 | -8.615850e-47 |
| Msa0034800 | Msa0268340 | 0.825923 | 3.596426e-54 | -8.615850e-47 |
| Msa0035090 | Msa0268340 | 0.823749 | 1.171401e-53 | -8.615850e-47 |
| Msa0039200 | Msa0268340 | 0.853809 | 1.868764e-61 | -8.615850e-47 |
| Msa0040190 | Msa0268340 | 0.865434 | 5.922972e-65 | -8.615850e-47 |
| Msa0057740 | Msa0268340 | 0.805131 | 1.547886e-49 | -8.615850e-47 |
| Msa0065190 | Msa0268340 | 0.839021 | 2.032392e-57 | -8.615850e-47 |
| Msa0067820 | Msa0268340 | 0.802734 | 4.874427e-49 | -8.615850e-47 |
| Msa0083570 | Msa0268340 | 0.812125 | 4.962627e-51 | -8.615850e-47 |
| Msa0084550 | Msa0268340 | 0.832492 | 9.163973e-56 | -8.615850e-47 |
| Msa0086820 | Msa0268340 | 0.850222 | 1.952658e-60 | -8.615850e-47 |
| Msa0087880 | Msa0268340 | 0.858280 | 9.181184e-63 | -8.615850e-47 |
| Msa0092750 | Msa0268340 | 0.827692 | 1.359667e-54 | -8.615850e-47 |
| Msa0095140 | Msa0268340 | 0.949472 | 1.188718e-107 | -8.615850e-47 |
| Msa0095190 | Msa0268340 | 0.811761 | 5.954580e-51 | -8.615850e-47 |
| Msa0095200 | Msa0268340 | 0.808014 | 3.812393e-50 | -8.615850e-47 |
| Msa0095240 | Msa0268340 | 0.940240 | 3.273383e-100 | -8.615850e-47 |
| Msa0095270 | Msa0268340 | 0.960526 | 1.173149e-118 | -8.615850e-47 |
| Msa0099830 | Msa0268340 | 0.820869 | 5.460109e-53 | -8.615850e-47 |
| Msa0103060 | Msa0268340 | 0.806183 | 9.308276e-50 | -8.615850e-47 |
| Msa0110500 | Msa0268340 | 0.800566 | 1.357361e-48 | -8.615850e-47 |
| Msa0114960 | Msa0268340 | 0.815102 | 1.097963e-51 | -8.615850e-47 |
| Msa0123940 | Msa0268340 | 0.802640 | 5.095898e-49 | -8.615850e-47 |
| Msa0124070 | Msa0268340 | 0.804764 | 1.846914e-49 | -8.615850e-47 |
| Msa0130120 | Msa0268340 | 0.818250 | 2.161856e-52 | -8.615850e-47 |
| Msa0130620 | Msa0268340 | 0.832399 | 9.665297e-56 | -8.615850e-47 |
| Msa0133670 | Msa0268340 | 0.853009 | 3.171148e-61 | -8.615850e-47 |
| Msa0133880 | Msa0268340 | 0.854468 | 1.206348e-61 | -8.615850e-47 |
| Msa0134550 | Msa0268340 | 0.869252 | 3.558494e-66 | -8.615850e-47 |
| Msa0138380 | Msa0268340 | 0.800573 | 1.352675e-48 | -8.615850e-47 |
| Msa0139740 | Msa0268340 | 0.819788 | 9.664414e-53 | -8.615850e-47 |
| Msa0141670 | Msa0268340 | 0.812913 | 3.337903e-51 | -8.615850e-47 |
| Msa0143210 | Msa0268340 | 0.813151 | 2.959745e-51 | -8.615850e-47 |
| Msa0156780 | Msa0268340 | 0.854078 | 1.563349e-61 | -8.615850e-47 |
| Msa0175900 | Msa0268340 | 0.822289 | 2.565438e-53 | -8.615850e-47 |
| Msa0176530 | Msa0268340 | 0.832477 | 9.246814e-56 | -8.615850e-47 |
| Msa0181290 | Msa0268340 | 0.820013 | 8.582286e-53 | -8.615850e-47 |
| Msa0184120 | Msa0268340 | 0.856913 | 2.331843e-62 | -8.615850e-47 |
| Msa0186750 | Msa0268340 | 0.811408 | 7.108292e-51 | -8.615850e-47 |
| Msa0189050 | Msa0268340 | 0.843533 | 1.321483e-58 | -8.615850e-47 |
| Msa0197600 | Msa0268340 | 0.810325 | 1.219100e-50 | -8.615850e-47 |
| Msa0201910 | Msa0268340 | 0.820499 | 6.639806e-53 | -8.615850e-47 |
| Msa0207220 | Msa0268340 | 0.813262 | 2.798206e-51 | -8.615850e-47 |
| Msa0207530 | Msa0268340 | 0.827174 | 1.810140e-54 | -8.615850e-47 |
| Msa0207900 | Msa0268340 | 0.817270 | 3.597960e-52 | -8.615850e-47 |
| Msa0218480 | Msa0268340 | 0.807843 | 4.147196e-50 | -8.615850e-47 |
| Msa0218590 | Msa0268340 | 0.810398 | 1.175866e-50 | -8.615850e-47 |
| Msa0221860 | Msa0268340 | 0.928790 | 1.752647e-92 | -8.615850e-47 |
| Msa0222070 | Msa0268340 | 0.804081 | 2.562904e-49 | -8.615850e-47 |
| Msa0227290 | Msa0268340 | 0.829708 | 4.425610e-55 | -8.615850e-47 |
| Msa0231310 | Msa0268340 | 0.848872 | 4.646538e-60 | -8.615850e-47 |
| Msa0240290 | Msa0268340 | 0.846949 | 1.574466e-59 | -8.615850e-47 |
| Msa0240460 | Msa0268340 | 0.802566 | 5.279303e-49 | -8.615850e-47 |
| Msa0256170 | Msa0268340 | 0.826278 | 2.960958e-54 | -8.615850e-47 |
| Msa0268180 | Msa0268340 | 0.870377 | 1.528276e-66 | -8.615850e-47 |
| Msa0268220 | Msa0268340 | 0.950188 | 2.754301e-108 | -8.615850e-47 |
| Msa0268340 | Msa0268380 | 0.814591 | 1.424960e-51 | -8.615850e-47 |
| Msa0268340 | Msa0268420 | 0.871853 | 4.977852e-67 | -8.615850e-47 |
| Msa0268340 | Msa0268460 | 0.950552 | 1.300656e-108 | -8.615850e-47 |
| Msa0268340 | Msa0268500 | 0.967614 | 1.606592e-127 | -8.615850e-47 |
| Msa0268340 | Msa0268540 | 0.843441 | 1.398595e-58 | -8.615850e-47 |
| Msa0268340 | Msa0268560 | 0.815813 | 7.627218e-52 | -8.615850e-47 |
| Msa0268340 | Msa0268630 | 0.823727 | 1.185425e-53 | -8.615850e-47 |
| Msa0268340 | Msa0268640 | 0.807067 | 6.057034e-50 | -8.615850e-47 |
| Msa0268340 | Msa0268650 | 0.867302 | 1.512573e-65 | -8.615850e-47 |
| Msa0268340 | Msa0268680 | 0.905879 | 2.689829e-80 | -8.615850e-47 |
| Msa0268340 | Msa0268690 | 0.896422 | 3.744811e-76 | -8.615850e-47 |
| Msa0268340 | Msa0268730 | 0.830944 | 2.208056e-55 | -8.615850e-47 |
| Msa0268340 | Msa0268740 | 0.807804 | 4.226054e-50 | -8.615850e-47 |
| Msa0268340 | Msa0268760 | 0.866432 | 2.864536e-65 | -8.615850e-47 |
| Msa0268340 | Msa0268850 | 0.850535 | 1.594414e-60 | -8.615850e-47 |
| Msa0268340 | Msa0268900 | 0.930797 | 9.693095e-94 | -8.615850e-47 |
| Msa0268340 | Msa0268930 | 0.826464 | 2.674935e-54 | -8.615850e-47 |
| Msa0268340 | Msa0269060 | 0.862524 | 4.768488e-64 | -8.615850e-47 |
| Msa0268340 | Msa0269100 | 0.949664 | 8.045997e-108 | -8.615850e-47 |
| Msa0268340 | Msa0278080 | 0.822387 | 2.433818e-53 | -8.615850e-47 |
| Msa0268340 | Msa0282880 | 0.814065 | 1.862025e-51 | -8.615850e-47 |
| Msa0268340 | Msa0288270 | 0.804795 | 1.820027e-49 | -8.615850e-47 |
| Msa0268340 | Msa0288280 | 0.805105 | 1.567086e-49 | -8.615850e-47 |
| Msa0268340 | Msa0301460 | 0.806528 | 7.873091e-50 | -8.615850e-47 |
| Msa0268340 | Msa0301800 | 0.810049 | 1.398543e-50 | -8.615850e-47 |
| Msa0268340 | Msa0306130 | 0.830387 | 3.021511e-55 | -8.615850e-47 |
| Msa0268340 | Msa0307750 | 0.801173 | 1.020174e-48 | -8.615850e-47 |
| Msa0268340 | Msa0309160 | 0.842692 | 2.213780e-58 | -8.615850e-47 |
| Msa0268340 | Msa0317630 | 0.826330 | 2.878118e-54 | -8.615850e-47 |
| Msa0268340 | Msa0321180 | 0.805111 | 1.563259e-49 | -8.615850e-47 |
| Msa0268340 | Msa0321200 | 0.811127 | 8.179218e-51 | -8.615850e-47 |
| Msa0268340 | Msa0324060 | 0.819505 | 1.121383e-52 | -8.615850e-47 |
| Msa0268340 | Msa0330270 | 0.803228 | 3.852897e-49 | -8.615850e-47 |
| Msa0268340 | Msa0338900 | 0.832273 | 1.038464e-55 | -8.615850e-47 |
| Msa0268340 | Msa0344180 | 0.838964 | 2.102683e-57 | -8.615850e-47 |
| Msa0268340 | Msa0344190 | 0.809319 | 2.007188e-50 | -8.615850e-47 |
| Msa0268340 | Msa0344200 | 0.825467 | 4.613786e-54 | -8.615850e-47 |
| Msa0268340 | Msa0344240 | 0.887754 | 1.080433e-72 | -8.615850e-47 |
| Msa0268340 | Msa0344250 | 0.927185 | 1.671378e-91 | -8.615850e-47 |
| Msa0268340 | Msa0344310 | 0.801885 | 7.290942e-49 | -8.615850e-47 |
| Msa0268340 | Msa0365150 | 0.808590 | 2.873639e-50 | -8.615850e-47 |
| Msa0268340 | Msa0369750 | 0.810367 | 1.193818e-50 | -8.615850e-47 |
| Msa0268340 | Msa0370210 | 0.824770 | 6.739992e-54 | -8.615850e-47 |
| Msa0268340 | Msa0370510 | 0.814061 | 1.866149e-51 | -8.615850e-47 |
| Msa0268340 | Msa0372550 | 0.800713 | 1.266867e-48 | -8.615850e-47 |
| Msa0268340 | Msa0377460 | 0.809692 | 1.668486e-50 | -8.615850e-47 |
| Msa0268340 | Msa0379900 | 0.817812 | 2.715578e-52 | -8.615850e-47 |
| Msa0268340 | Msa0386390 | 0.801094 | 1.059013e-48 | -8.615850e-47 |
| Msa0268340 | Msa0390950 | 0.809970 | 1.454277e-50 | -8.615850e-47 |
| Msa0268340 | Msa0398610 | 0.839921 | 1.186396e-57 | -8.615850e-47 |
| Msa0268340 | Msa0398620 | 0.815143 | 1.074986e-51 | -8.615850e-47 |
| Msa0268340 | Msa0398630 | 0.801144 | 1.034226e-48 | -8.615850e-47 |
| Msa0268340 | Msa0423600 | 0.813021 | 3.160765e-51 | -8.615850e-47 |
| Msa0268340 | Msa0426860 | 0.816342 | 5.811247e-52 | -8.615850e-47 |
| Msa0268340 | Msa0426890 | 0.816472 | 5.433285e-52 | -8.615850e-47 |
| Msa0268340 | Msa0427050 | 0.831005 | 2.132951e-55 | -8.615850e-47 |
| Msa0268340 | Msa0449900 | 0.886667 | 2.802672e-72 | -8.615850e-47 |
| Msa0268340 | Msa0449930 | 0.823905 | 1.076628e-53 | -8.615850e-47 |
| Msa0268340 | Msa0451370 | 0.806223 | 9.131081e-50 | -8.615850e-47 |
| Msa0268340 | Msa0456480 | 0.817299 | 3.544784e-52 | -8.615850e-47 |
| Msa0268340 | Msa0463960 | 0.800925 | 1.146339e-48 | -8.615850e-47 |
| Msa0268340 | Msa0464500 | 0.814237 | 1.706334e-51 | -8.615850e-47 |
| Msa0268340 | Msa0471090 | 0.821532 | 3.840438e-53 | -8.615850e-47 |
| Msa0268340 | Msa0472870 | 0.800112 | 1.678935e-48 | -8.615850e-47 |
| Msa0268340 | Msa0473320 | 0.817579 | 3.065404e-52 | -8.615850e-47 |
| Msa0268340 | Msa0473450 | 0.828212 | 1.019250e-54 | -8.615850e-47 |
| Msa0268340 | Msa0475830 | 0.872649 | 2.704291e-67 | -8.615850e-47 |
| Msa0268340 | Msa0482020 | 0.809681 | 1.677933e-50 | -8.615850e-47 |
| Msa0268340 | Msa0497060 | 0.806280 | 8.883319e-50 | -8.615850e-47 |
| Msa0268340 | Msa0509510 | 0.813148 | 2.963594e-51 | -8.615850e-47 |
| Msa0268340 | Msa0512770 | 0.800317 | 1.525350e-48 | -8.615850e-47 |
| Msa0268340 | Msa0515680 | 0.802113 | 6.544392e-49 | -8.615850e-47 |
| Msa0268340 | Msa0517400 | 0.806570 | 7.715940e-50 | -8.615850e-47 |
| Msa0268340 | Msa0558890 | 0.818792 | 1.629023e-52 | -8.615850e-47 |
| Msa0268340 | Msa0564000 | 0.812597 | 3.912805e-51 | -8.615850e-47 |
| Msa0268340 | Msa0565930 | 0.801288 | 9.665983e-49 | -8.615850e-47 |
| Msa0268340 | Msa0568490 | 0.812294 | 4.558747e-51 | -8.615850e-47 |
| Msa0268340 | Msa0568810 | 0.807873 | 4.085754e-50 | -8.615850e-47 |
| Msa0268340 | Msa0571220 | 0.809164 | 2.166131e-50 | -8.615850e-47 |
| Msa0268340 | Msa0574230 | 0.802034 | 6.794445e-49 | -8.615850e-47 |
| Msa0268340 | Msa0574450 | 0.810260 | 1.259079e-50 | -8.615850e-47 |
| Msa0268340 | Msa0576150 | 0.809290 | 2.035327e-50 | -8.615850e-47 |
| Msa0268340 | Msa0577910 | 0.819360 | 1.209882e-52 | -8.615850e-47 |
| Msa0268340 | Msa0582530 | 0.824816 | 6.576235e-54 | -8.615850e-47 |
| Msa0268340 | Msa0582570 | 0.929134 | 1.074598e-92 | -8.615850e-47 |
| Msa0268340 | Msa0582580 | 0.932486 | 7.922141e-95 | -8.615850e-47 |
| Msa0268340 | Msa0582620 | 0.837752 | 4.318004e-57 | -8.615850e-47 |
| Msa0268340 | Msa0582640 | 0.813379 | 2.636990e-51 | -8.615850e-47 |
| Msa0268340 | Msa0582660 | 0.816683 | 4.872874e-52 | -8.615850e-47 |
| Msa0268340 | Msa0582710 | 0.841450 | 4.717147e-58 | -8.615850e-47 |
| Msa0268340 | Msa0582740 | 0.846946 | 1.577447e-59 | -8.615850e-47 |
| Msa0268340 | Msa0582780 | 0.816735 | 4.744883e-52 | -8.615850e-47 |
| Msa0268340 | Msa0582830 | 0.843615 | 1.256862e-58 | -8.615850e-47 |
| Msa0268340 | Msa0582900 | 0.811615 | 6.407649e-51 | -8.615850e-47 |
| Msa0268340 | Msa0582930 | 0.837264 | 5.759296e-57 | -8.615850e-47 |
| Msa0268340 | Msa0587060 | 0.828869 | 7.073062e-55 | -8.615850e-47 |
| Msa0268340 | Msa0591370 | 0.876333 | 1.518216e-68 | -8.615850e-47 |
| Msa0268340 | Msa0591380 | 0.800602 | 1.334301e-48 | -8.615850e-47 |
| Msa0268340 | Msa0595240 | 0.830245 | 3.273671e-55 | -8.615850e-47 |
| Msa0268340 | Msa0595780 | 0.816870 | 4.424739e-52 | -8.615850e-47 |
| Msa0268340 | Msa0601780 | 0.802815 | 4.690980e-49 | -8.615850e-47 |
| Msa0268340 | Msa0606680 | 0.846695 | 1.848089e-59 | -8.615850e-47 |
| Msa0268340 | Msa0619060 | 0.808782 | 2.614564e-50 | -8.615850e-47 |
| Msa0268340 | Msa0619480 | 0.816310 | 5.906635e-52 | -8.615850e-47 |
| Msa0268340 | Msa0626890 | 0.815612 | 8.457016e-52 | -8.615850e-47 |
| Msa0268340 | Msa0635350 | 0.804642 | 1.958445e-49 | -8.615850e-47 |
| Msa0268340 | Msa0635990 | 0.833679 | 4.643983e-56 | -8.615850e-47 |
| Msa0268340 | Msa0638040 | 0.800284 | 1.549312e-48 | -8.615850e-47 |
| Msa0268340 | Msa0653710 | 0.800011 | 1.760644e-48 | -8.615850e-47 |
| Msa0268340 | Msa0659130 | 0.811155 | 8.064990e-51 | -8.615850e-47 |
| Msa0268340 | Msa0659640 | 0.831299 | 1.805817e-55 | -8.615850e-47 |
| Msa0268340 | Msa0665010 | 0.817540 | 3.127199e-52 | -8.615850e-47 |
| Msa0268340 | Msa0665040 | 0.808658 | 2.779006e-50 | -8.615850e-47 |
| Msa0268340 | Msa0668630 | 0.898857 | 3.515944e-77 | -8.615850e-47 |
| Msa0268340 | Msa0672350 | 0.801242 | 9.874279e-49 | -8.615850e-47 |
| Msa0268340 | Msa0677110 | 0.811694 | 6.158995e-51 | -8.615850e-47 |
| Msa0268340 | Msa0687320 | 0.830294 | 3.185112e-55 | -8.615850e-47 |
| Msa0268340 | Msa0688350 | 0.801527 | 8.633927e-49 | -8.615850e-47 |
| Msa0268340 | Msa0705610 | 0.811592 | 6.481953e-51 | -8.615850e-47 |
| Msa0268340 | Msa0706710 | 0.843782 | 1.134004e-58 | -8.615850e-47 |
| Msa0268340 | Msa0707870 | 0.801063 | 1.074204e-48 | -8.615850e-47 |
| Msa0268340 | Msa0708120 | 0.822794 | 1.957542e-53 | -8.615850e-47 |
| Msa0268340 | Msa0714160 | 0.801567 | 8.471448e-49 | -8.615850e-47 |
| Msa0268340 | Msa0720850 | 0.801772 | 7.690294e-49 | -8.615850e-47 |
| Msa0268340 | Msa0727020 | 0.871755 | 5.364604e-67 | -8.615850e-47 |
| Msa0268340 | Msa0727030 | 0.805329 | 1.406820e-49 | -8.615850e-47 |
| Msa0268340 | Msa0727040 | 0.827540 | 1.478449e-54 | -8.615850e-47 |
| Msa0268340 | Msa0729590 | 0.809921 | 1.490161e-50 | -8.615850e-47 |
| Msa0268340 | Msa0736330 | 0.846843 | 1.683375e-59 | -8.615850e-47 |
| Msa0268340 | Msa0736930 | 0.815066 | 1.118091e-51 | -8.615850e-47 |
| Msa0268340 | Msa0739570 | 0.822255 | 2.612805e-53 | -8.615850e-47 |
| Msa0268340 | Msa0741600 | 0.800081 | 1.703687e-48 | -8.615850e-47 |
| Msa0268340 | Msa0755590 | 0.801294 | 9.637109e-49 | -8.615850e-47 |
| Msa0268340 | Msa0766880 | 0.866970 | 1.931093e-65 | -8.615850e-47 |
| Msa0268340 | Msa0772210 | 0.837348 | 5.481362e-57 | -8.615850e-47 |
| Msa0268340 | Msa0778060 | 0.835629 | 1.501295e-56 | -8.615850e-47 |
| Msa0268340 | Msa0782330 | 0.805971 | 1.031691e-49 | -8.615850e-47 |
| Msa0268340 | Msa0801390 | 0.809263 | 2.062533e-50 | -8.615850e-47 |
| Msa0268340 | Msa0804930 | 0.816550 | 5.218781e-52 | -8.615850e-47 |
| Msa0268340 | Msa0821490 | 0.809020 | 2.325652e-50 | -8.615850e-47 |
| Msa0268340 | Msa0839730 | 0.834401 | 3.061413e-56 | -8.615850e-47 |
| Msa0268340 | Msa0841980 | 0.810142 | 1.335279e-50 | -8.615850e-47 |
| Msa0268340 | Msa0855490 | 0.844295 | 8.257069e-59 | -8.615850e-47 |
| Msa0268340 | Msa0860270 | 0.828272 | 9.860268e-55 | -8.615850e-47 |
| Msa0268340 | Msa0880060 | 0.804349 | 2.254790e-49 | -8.615850e-47 |
| Msa0268340 | Msa0910650 | 0.800046 | 1.731800e-48 | -8.615850e-47 |
| Msa0268340 | Msa0924820 | 0.915158 | 8.200245e-85 | -8.615850e-47 |
| Msa0268340 | Msa0924870 | 0.814728 | 1.328722e-51 | -8.615850e-47 |
| Msa0268340 | Msa0924890 | 0.872875 | 2.272272e-67 | -8.615850e-47 |
| Msa0268340 | Msa0924970 | 0.884371 | 2.030090e-71 | -8.615850e-47 |
| Msa0268340 | Msa0925020 | 0.935935 | 3.868107e-97 | -8.615850e-47 |
| Msa0268340 | Msa0930990 | 0.887465 | 1.393490e-72 | -8.615850e-47 |
| Msa0268340 | Msa0931070 | 0.804598 | 2.000122e-49 | -8.615850e-47 |
| Msa0268340 | Msa0931090 | 0.847435 | 1.158932e-59 | -8.615850e-47 |
| Msa0268340 | Msa0931100 | 0.802931 | 4.438223e-49 | -8.615850e-47 |
| Msa0268340 | Msa0931150 | 0.838795 | 2.325850e-57 | -8.615850e-47 |
| Msa0268340 | Msa0931210 | 0.813907 | 2.017995e-51 | -8.615850e-47 |
| Msa0268340 | Msa0931220 | 0.819881 | 9.200163e-53 | -8.615850e-47 |
| Msa0268340 | Msa0931240 | 0.814785 | 1.290870e-51 | -8.615850e-47 |
| Msa0268340 | Msa0931280 | 0.864156 | 1.489160e-64 | -8.615850e-47 |
| Msa0268340 | Msa0981300 | 0.811424 | 7.051496e-51 | -8.615850e-47 |
| Msa0268340 | Msa0983670 | 0.915592 | 4.899529e-85 | -8.615850e-47 |
| Msa0268340 | Msa1008960 | 0.805904 | 1.065897e-49 | -8.615850e-47 |
| Msa0268340 | Msa1016130 | 0.821118 | 4.785167e-53 | -8.615850e-47 |
| Msa0268340 | Msa1024580 | 0.812075 | 5.088289e-51 | -8.615850e-47 |
| Msa0268340 | Msa1030280 | 0.801360 | 9.340893e-49 | -8.615850e-47 |
| Msa0268340 | Msa1033230 | 0.801818 | 7.524795e-49 | -8.615850e-47 |
| Msa0268340 | Msa1049440 | 0.829659 | 4.547427e-55 | -8.615850e-47 |
| Msa0268340 | Msa1063180 | 0.805531 | 1.276026e-49 | -8.615850e-47 |
| Msa0268340 | Msa1070900 | 0.810195 | 1.300488e-50 | -8.615850e-47 |
| Msa0268340 | Msa1070930 | 0.813585 | 2.376275e-51 | -8.615850e-47 |
| Msa0268340 | Msa1072770 | 0.822745 | 2.009410e-53 | -8.615850e-47 |
| Msa0268340 | Msa1079610 | 0.855868 | 4.726628e-62 | -8.615850e-47 |
| Msa0268340 | Msa1086020 | 0.951590 | 1.481557e-109 | -8.615850e-47 |
| Msa0268340 | Msa1086060 | 0.857992 | 1.118481e-62 | -8.615850e-47 |
| Msa0268340 | Msa1086080 | 0.808503 | 2.999641e-50 | -8.615850e-47 |
| Msa0268340 | Msa1086100 | 0.814873 | 1.234279e-51 | -8.615850e-47 |
| Msa0268340 | Msa1086160 | 0.883733 | 3.495322e-71 | -8.615850e-47 |
| Msa0268340 | Msa1086170 | 0.838436 | 2.879913e-57 | -8.615850e-47 |
| Msa0268340 | Msa1086210 | 0.805799 | 1.121388e-49 | -8.615850e-47 |
| Msa0268340 | Msa1086260 | 0.877023 | 8.760498e-69 | -8.615850e-47 |
| Msa0268340 | Msa1086290 | 0.843035 | 1.794202e-58 | -8.615850e-47 |
| Msa0268340 | Msa1086330 | 0.945431 | 3.096206e-104 | -8.615850e-47 |
| Msa0268340 | Msa1086340 | 0.930287 | 2.040838e-93 | -8.615850e-47 |
| Msa0268340 | Msa1086370 | 0.857953 | 1.148570e-62 | -8.615850e-47 |
| Msa0268340 | Msa1086410 | 0.917856 | 3.187053e-86 | -8.615850e-47 |
| Msa0268340 | Msa1086440 | 0.851180 | 1.049385e-60 | -8.615850e-47 |
| Msa0268340 | Msa1086480 | 0.835973 | 1.228336e-56 | -8.615850e-47 |
| Msa0268340 | Msa1086520 | 0.952076 | 5.266428e-110 | -8.615850e-47 |
| Msa0268340 | Msa1086630 | 0.941758 | 2.379911e-101 | -8.615850e-47 |
| Msa0268340 | Msa1086690 | 0.952263 | 3.530980e-110 | -8.615850e-47 |
| Msa0268340 | Msa1086830 | 0.945802 | 1.542583e-104 | -8.615850e-47 |
| Msa0268340 | Msa1086870 | 0.835170 | 1.960985e-56 | -8.615850e-47 |
| Msa0268340 | Msa1086910 | 0.817086 | 3.957773e-52 | -8.615850e-47 |
| Msa0268340 | Msa1087000 | 0.900252 | 8.823476e-78 | -8.615850e-47 |
| Msa0268340 | Msa1090230 | 0.806213 | 9.174604e-50 | -8.615850e-47 |
| Msa0268340 | Msa1091690 | 0.803737 | 3.021683e-49 | -8.615850e-47 |
| Msa0268340 | Msa1098570 | 0.802739 | 4.863137e-49 | -8.615850e-47 |
| Msa0268340 | Msa1108530 | 0.806480 | 8.061389e-50 | -8.615850e-47 |
| Msa0268340 | Msa1120540 | 0.805257 | 1.456352e-49 | -8.615850e-47 |
| Msa0268340 | Msa1122480 | 0.812643 | 3.823109e-51 | -8.615850e-47 |
| Msa0268340 | Msa1123340 | 0.816722 | 4.775827e-52 | -8.615850e-47 |
| Msa0268340 | Msa1124440 | 0.865308 | 6.488820e-65 | -8.615850e-47 |
| Msa0268340 | Msa1125610 | 0.809979 | 1.447428e-50 | -8.615850e-47 |
| Msa0268340 | Msa1126910 | 0.819607 | 1.062922e-52 | -8.615850e-47 |
| Msa0268340 | Msa1130070 | 0.814193 | 1.744818e-51 | -8.615850e-47 |
| Msa0268340 | Msa1130700 | 0.830459 | 2.902680e-55 | -8.615850e-47 |
| Msa0268340 | Msa1131010 | 0.802109 | 6.556889e-49 | -8.615850e-47 |
| Msa0268340 | Msa1132540 | 0.803130 | 4.037591e-49 | -8.615850e-47 |
| Msa0268340 | Msa1140940 | 0.814862 | 1.241285e-51 | -8.615850e-47 |
| Msa0268340 | Msa1143140 | 0.817224 | 3.684119e-52 | -8.615850e-47 |
| Msa0268340 | Msa1143160 | 0.805138 | 1.542702e-49 | -8.615850e-47 |
| Msa0268340 | Msa1152280 | 0.801426 | 9.052962e-49 | -8.615850e-47 |
| Msa0268340 | Msa1157160 | 0.834910 | 2.280092e-56 | -8.615850e-47 |
| Msa0268340 | Msa1161120 | 0.821606 | 3.693076e-53 | -8.615850e-47 |
| Msa0268340 | Msa1161160 | 0.816089 | 6.619363e-52 | -8.615850e-47 |
| Msa0268340 | Msa1164650 | 0.824721 | 6.925177e-54 | -8.615850e-47 |
| Msa0268340 | Msa1168130 | 0.846811 | 1.718186e-59 | -8.615850e-47 |
| Msa0268340 | Msa1173410 | 0.816117 | 6.522769e-52 | -8.615850e-47 |
| Msa0268340 | Msa1182950 | 0.802053 | 6.732156e-49 | -8.615850e-47 |
| Msa0268340 | Msa1195860 | 0.816856 | 4.457675e-52 | -8.615850e-47 |
| Msa0268340 | Msa1198420 | 0.827221 | 1.763042e-54 | -8.615850e-47 |
| Msa0268340 | Msa1199690 | 0.842785 | 2.091538e-58 | -8.615850e-47 |
| Msa0268340 | Msa1204110 | 0.815836 | 7.536953e-52 | -8.615850e-47 |
| Msa0268340 | Msa1209390 | 0.811478 | 6.860892e-51 | -8.615850e-47 |
| Msa0268340 | Msa1209650 | 0.821953 | 3.068498e-53 | -8.615850e-47 |
| Msa0268340 | Msa1211100 | 0.810216 | 1.287274e-50 | -8.615850e-47 |
| Msa0268340 | Msa1211120 | 0.805270 | 1.447773e-49 | -8.615850e-47 |
| Msa0268340 | Msa1211880 | 0.853205 | 2.787206e-61 | -8.615850e-47 |
| Msa0268340 | Msa1215660 | 0.811514 | 6.738450e-51 | -8.615850e-47 |
| Msa0268340 | Msa1245300 | 0.808518 | 2.976990e-50 | -8.615850e-47 |
| Msa0268340 | Msa1246420 | 0.816222 | 6.181068e-52 | -8.615850e-47 |
| Msa0268340 | Msa1251960 | 0.809284 | 2.041878e-50 | -8.615850e-47 |
| Msa0268340 | Msa1252040 | 0.851965 | 6.292293e-61 | -8.615850e-47 |
| Msa0268340 | Msa1264230 | 0.807456 | 5.011456e-50 | -8.615850e-47 |
| Msa0268340 | Msa1267800 | 0.815173 | 1.058912e-51 | -8.615850e-47 |
| Msa0268340 | Msa1279240 | 0.825363 | 4.883139e-54 | -8.615850e-47 |
| Msa0268340 | Msa1280020 | 0.813592 | 2.367615e-51 | -8.615850e-47 |
| Msa0268340 | Msa1298740 | 0.817516 | 3.166410e-52 | -8.615850e-47 |
| Msa0268340 | Msa1302920 | 0.806850 | 6.732545e-50 | -8.615850e-47 |
| Msa0268340 | Msa1309910 | 0.827864 | 1.236123e-54 | -8.615850e-47 |
| Msa0268340 | Msa1316160 | 0.801374 | 9.278030e-49 | -8.615850e-47 |
| Msa0268340 | Msa1319520 | 0.822552 | 2.228205e-53 | -8.615850e-47 |
| Msa0268340 | Msa1327820 | 0.812517 | 4.074282e-51 | -8.615850e-47 |
| Msa0268340 | Msa1332180 | 0.826756 | 2.278645e-54 | -8.615850e-47 |
| Msa0268340 | Msa1343540 | 0.813598 | 2.360510e-51 | -8.615850e-47 |
| Msa0268340 | Msa1351560 | 0.808079 | 3.692979e-50 | -8.615850e-47 |
| Msa0268340 | Msa1352820 | 0.800027 | 1.747466e-48 | -8.615850e-47 |
| Msa0268340 | Msa1354850 | 0.952105 | 4.953683e-110 | -8.615850e-47 |
| Msa0268340 | Msa1354890 | 0.833326 | 5.688723e-56 | -8.615850e-47 |
| Msa0268340 | Msa1354910 | 0.812942 | 3.288135e-51 | -8.615850e-47 |
| Msa0268340 | Msa1354930 | 0.805261 | 1.453992e-49 | -8.615850e-47 |
| Msa0268340 | Msa1355020 | 0.956408 | 3.168429e-114 | -8.615850e-47 |
| Msa0268340 | Msa1355060 | 0.838422 | 2.903846e-57 | -8.615850e-47 |
| Msa0268340 | Msa1355100 | 0.813515 | 2.462234e-51 | -8.615850e-47 |
| Msa0268340 | Msa1361090 | 0.804053 | 2.598434e-49 | -8.615850e-47 |
| Msa0268340 | Msa1371250 | 0.844940 | 5.537754e-59 | -8.615850e-47 |
| Msa0268340 | Msa1379370 | 0.828757 | 7.526207e-55 | -8.615850e-47 |
| Msa0268340 | Msa1380540 | 0.931598 | 2.981265e-94 | -8.615850e-47 |
| Msa0268340 | Msa1380600 | 0.831090 | 2.033145e-55 | -8.615850e-47 |
| Msa0268340 | Msa1385450 | 0.835457 | 1.659502e-56 | -8.615850e-47 |
| Msa0268340 | Msa1385940 | 0.846921 | 1.603105e-59 | -8.615850e-47 |
| Msa0268340 | Msa1387090 | 0.837187 | 6.027058e-57 | -8.615850e-47 |
| Msa0268340 | Msa1389990 | 0.808764 | 2.637909e-50 | -8.615850e-47 |
| Msa0268340 | Msa1390410 | 0.840810 | 6.946941e-58 | -8.615850e-47 |
| Msa0268340 | Msa1393600 | 0.835901 | 1.281138e-56 | -8.615850e-47 |
| Msa0268340 | Msa1394090 | 0.949663 | 8.058032e-108 | -8.615850e-47 |
| Msa0268340 | Msa1394100 | 0.951319 | 2.623428e-109 | -8.615850e-47 |
| Msa0268340 | Msa1394140 | 0.814990 | 1.162435e-51 | -8.615850e-47 |
| Msa0268340 | Msa1394150 | 0.804111 | 2.527204e-49 | -8.615850e-47 |
| Msa0268340 | Msa1394170 | 0.858472 | 8.046307e-63 | -8.615850e-47 |
| Msa0268340 | Msa1394210 | 0.807211 | 5.645675e-50 | -8.615850e-47 |
| Msa0268340 | Msa1394240 | 0.805536 | 1.273374e-49 | -8.615850e-47 |
| Msa0268340 | Msa1394280 | 0.941628 | 2.988356e-101 | -8.615850e-47 |
| Msa0268340 | Msa1400600 | 0.842461 | 2.550345e-58 | -8.615850e-47 |
| Msa0268340 | Msa1414560 | 0.801356 | 9.359023e-49 | -8.615850e-47 |
| Msa0268340 | Msa1415120 | 0.867910 | 9.655074e-66 | -8.615850e-47 |
| Msa0268340 | Msa1420130 | 0.801433 | 9.026078e-49 | -8.615850e-47 |
| Msa0268340 | Msa1422750 | 0.801112 | 1.049820e-48 | -8.615850e-47 |
| Msa0268340 | Msa1425050 | 0.800877 | 1.172754e-48 | -8.615850e-47 |
| Msa0268340 | Msa1425110 | 0.803607 | 3.215019e-49 | -8.615850e-47 |
| Msa0268340 | Msa1433650 | 0.822243 | 2.629384e-53 | -8.615850e-47 |
| Msa0268340 | Msa1438420 | 0.811972 | 5.357586e-51 | -8.615850e-47 |
| Msa0268340 | Msa1439160 | 0.840892 | 6.613993e-58 | -8.615850e-47 |
| Msa0268340 | Msa1450420 | 0.809480 | 1.853081e-50 | -8.615850e-47 |
| Msa0268340 | Msa1465410 | 0.831889 | 1.292079e-55 | -8.615850e-47 |
| Msa0268340 | Msa1466170 | 0.836030 | 1.187889e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268340 | MtrunA17_Chr4g0015801 | 81.301 | 123 | 10 | 3 | 68 | 177 | 1 | 123 | 5.46e-50 | 157 |
| Msa0268340 | MtrunA17_CPg0492771 | 81.301 | 123 | 10 | 3 | 68 | 177 | 1 | 123 | 5.46e-50 | 157 |
| Msa0268340 | MtrunA17_Chr6g0466591 | 88.889 | 90 | 6 | 1 | 68 | 153 | 1 | 90 | 1.93e-48 | 153 |
| Msa0268340 | MtrunA17_Chr4g0016891 | 86.957 | 92 | 8 | 2 | 68 | 155 | 1 | 92 | 4.39e-45 | 144 |
| Msa0268340 | MtrunA17_Chr7g0237831 | 94.667 | 75 | 2 | 1 | 68 | 140 | 1 | 75 | 5.92e-41 | 132 |
| Msa0268340 | MtrunA17_Chr6g0465781 | 96.610 | 59 | 2 | 0 | 68 | 126 | 1 | 59 | 1.31e-33 | 113 |
| Msa0268340 | MtrunA17_CPg0492791 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 2.84e-14 | 63.5 |
| Msa0268340 | MtrunA17_Chr4g0015781 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 2.84e-14 | 63.5 |
| Msa0268340 | MtrunA17_Chr4g0028951 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 2.84e-14 | 63.5 |
| Msa0268340 | MtrunA17_Chr8g0355611 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 2.84e-14 | 63.5 |
| Msa0268340 | MtrunA17_Chr4g0016881 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 5.50e-14 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268340 | ATCG00650.1 | 70.909 | 110 | 23 | 2 | 68 | 177 | 1 | 101 | 8.00e-44 | 141 |
| Msa0268340 | ATCG00630.1 | 90.000 | 30 | 3 | 0 | 15 | 44 | 1 | 30 | 1.53e-11 | 57.0 |
Find 16 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | 2_2:-70198087 | Msa0268340:CDS |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | 2_2:-70198758 | Msa0268340:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | 2_2:-70198086 | Msa0268340:CDS |
| AGTTTGTCCCCGATCCAATC+GGG | 0.455483 | 2_2:-70197691 | Msa0268340:CDS |
| GAGTTTGTCCCCGATCCAAT+CGG | 0.465376 | 2_2:-70197692 | Msa0268340:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | 2_2:-70198741 | Msa0268340:CDS |
| AAAGGTGACGAATTAACAAA+AGG | 0.521079 | 2_2:+70197517 | None:intergenic |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | 2_2:-70198751 | Msa0268340:CDS |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | 2_2:-70198772 | Msa0268340:CDS |
| GAGTCGCTTAGATTTATCCA+TGG | 0.585856 | 2_2:+70197744 | None:intergenic |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | 2_2:+70198756 | None:intergenic |
| GTATAGGAATAAACAAACCA+TGG | 0.629025 | 2_2:-70197761 | Msa0268340:CDS |
| TATCGACTTATTAGTCAACA+AGG | 0.637963 | 2_2:-70197634 | Msa0268340:CDS |
| GTTTGTCCCCGATCCAATCG+GGG | 0.647747 | 2_2:-70197690 | Msa0268340:CDS |
| TTTGTCCCCGATCCAATCGG+GGG | 0.661952 | 2_2:-70197689 | Msa0268340:CDS |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | 2_2:-70198085 | Msa0268340:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACTAGAATCAAAAAAA+GGG | + | chr2_2:70197594-70197613 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr2_2:70197718-70197737 | Msa0268340:CDS | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr2_2:70197812-70197831 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr2_2:70197968-70197987 | Msa0268340:intron | 15.0% |
| !!! | AATCCTTTTTTTATAAGAAA+TGG | - | chr2_2:70198471-70198490 | Msa0268340:intron | 15.0% |
| !!! | ATCCTTTTTTTATAAGAAAT+GGG | - | chr2_2:70198472-70198491 | Msa0268340:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | + | chr2_2:70198767-70198786 | None:intergenic | 15.0% |
| !! | AATAACTAGAATCAAAAAAA+GGG | + | chr2_2:70197594-70197613 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr2_2:70197718-70197737 | Msa0268340:CDS | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr2_2:70197812-70197831 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr2_2:70197968-70197987 | Msa0268340:intron | 15.0% |
| !!! | AATCCTTTTTTTATAAGAAA+TGG | - | chr2_2:70198471-70198490 | Msa0268340:intron | 15.0% |
| !!! | ATCCTTTTTTTATAAGAAAT+GGG | - | chr2_2:70198472-70198491 | Msa0268340:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | + | chr2_2:70198767-70198786 | None:intergenic | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr2_2:70197442-70197461 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr2_2:70197441-70197460 | Msa0268340:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | + | chr2_2:70197593-70197612 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | chr2_2:70197595-70197614 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | chr2_2:70197593-70197612 | Msa0268340:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr2_2:70197648-70197667 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr2_2:70197721-70197740 | Msa0268340:CDS | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr2_2:70197727-70197746 | Msa0268340:CDS | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr2_2:70197843-70197862 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr2_2:70198132-70198151 | Msa0268340:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr2_2:70198168-70198187 | Msa0268340:intron | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | - | chr2_2:70198302-70198321 | Msa0268340:intron | 20.0% |
| !! | ATCCCATTTCTTATAAAAAA+AGG | + | chr2_2:70198477-70198496 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | - | chr2_2:70198480-70198499 | Msa0268340:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | + | chr2_2:70198687-70198706 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTAGAACAGTAGT+AGG | + | chr2_2:70198824-70198843 | None:intergenic | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr2_2:70197442-70197461 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr2_2:70197441-70197460 | Msa0268340:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | + | chr2_2:70197593-70197612 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | chr2_2:70197595-70197614 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | chr2_2:70197593-70197612 | Msa0268340:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr2_2:70197648-70197667 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr2_2:70197721-70197740 | Msa0268340:CDS | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr2_2:70197727-70197746 | Msa0268340:CDS | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr2_2:70197843-70197862 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr2_2:70198132-70198151 | Msa0268340:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr2_2:70198168-70198187 | Msa0268340:intron | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | - | chr2_2:70198302-70198321 | Msa0268340:intron | 20.0% |
| !! | ATCCCATTTCTTATAAAAAA+AGG | + | chr2_2:70198477-70198496 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | - | chr2_2:70198480-70198499 | Msa0268340:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | + | chr2_2:70198687-70198706 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTAGAACAGTAGT+AGG | + | chr2_2:70198824-70198843 | None:intergenic | 20.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr2_2:70197665-70197684 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr2_2:70197666-70197685 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr2_2:70197847-70197866 | Msa0268340:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr2_2:70197848-70197867 | Msa0268340:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr2_2:70198086-70198105 | Msa0268340:CDS | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | + | chr2_2:70198343-70198362 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | + | chr2_2:70198344-70198363 | None:intergenic | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr2_2:70197665-70197684 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr2_2:70197666-70197685 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr2_2:70197847-70197866 | Msa0268340:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr2_2:70197848-70197867 | Msa0268340:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr2_2:70198086-70198105 | Msa0268340:CDS | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | + | chr2_2:70198343-70198362 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | + | chr2_2:70198344-70198363 | None:intergenic | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr2_2:70197444-70197463 | Msa0268340:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr2_2:70197482-70197501 | Msa0268340:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr2_2:70197554-70197573 | Msa0268340:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr2_2:70197598-70197617 | Msa0268340:CDS | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr2_2:70197753-70197772 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr2_2:70197827-70197846 | Msa0268340:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr2_2:70197851-70197870 | Msa0268340:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr2_2:70198089-70198108 | Msa0268340:CDS | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr2_2:70198122-70198141 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr2_2:70198176-70198195 | Msa0268340:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr2_2:70198177-70198196 | Msa0268340:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr2_2:70198178-70198197 | Msa0268340:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr2_2:70198274-70198293 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr2_2:70198275-70198294 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | - | chr2_2:70198502-70198521 | Msa0268340:intron | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | - | chr2_2:70198549-70198568 | Msa0268340:intron | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | - | chr2_2:70198629-70198648 | Msa0268340:intron | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | + | chr2_2:70198749-70198768 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr2_2:70197444-70197463 | Msa0268340:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr2_2:70197482-70197501 | Msa0268340:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr2_2:70197554-70197573 | Msa0268340:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr2_2:70197598-70197617 | Msa0268340:CDS | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr2_2:70197753-70197772 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr2_2:70197827-70197846 | Msa0268340:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr2_2:70197851-70197870 | Msa0268340:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr2_2:70198089-70198108 | Msa0268340:CDS | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr2_2:70198122-70198141 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr2_2:70198176-70198195 | Msa0268340:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr2_2:70198177-70198196 | Msa0268340:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr2_2:70198178-70198197 | Msa0268340:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr2_2:70198274-70198293 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr2_2:70198275-70198294 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | - | chr2_2:70198502-70198521 | Msa0268340:intron | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | - | chr2_2:70198549-70198568 | Msa0268340:intron | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | - | chr2_2:70198629-70198648 | Msa0268340:intron | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | + | chr2_2:70198749-70198768 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr2_2:70197756-70197775 | Msa0268340:CDS | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr2_2:70197776-70197795 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr2_2:70197777-70197796 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr2_2:70197852-70197871 | Msa0268340:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr2_2:70198047-70198066 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr2_2:70198096-70198115 | Msa0268340:CDS | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr2_2:70198244-70198263 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | - | chr2_2:70198486-70198505 | Msa0268340:intron | 35.0% |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr2_2:70197756-70197775 | Msa0268340:CDS | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr2_2:70197776-70197795 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr2_2:70197777-70197796 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr2_2:70197852-70197871 | Msa0268340:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr2_2:70198047-70198066 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr2_2:70198096-70198115 | Msa0268340:CDS | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr2_2:70198244-70198263 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | - | chr2_2:70198486-70198505 | Msa0268340:intron | 35.0% |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr2_2:70197743-70197762 | Msa0268340:CDS | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr2_2:70197765-70197784 | Msa0268340:CDS | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr2_2:70198231-70198250 | Msa0268340:intron | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | - | chr2_2:70198325-70198344 | Msa0268340:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | + | chr2_2:70198522-70198541 | None:intergenic | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr2_2:70197743-70197762 | Msa0268340:CDS | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr2_2:70197765-70197784 | Msa0268340:CDS | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr2_2:70198231-70198250 | Msa0268340:intron | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | - | chr2_2:70198325-70198344 | Msa0268340:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | + | chr2_2:70198522-70198541 | None:intergenic | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr2_2:70197510-70197529 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | chr2_2:70197576-70197595 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr2_2:70197603-70197622 | Msa0268340:CDS | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr2_2:70197604-70197623 | Msa0268340:CDS | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | + | chr2_2:70198589-70198608 | None:intergenic | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr2_2:70197510-70197529 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | chr2_2:70197576-70197595 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr2_2:70197603-70197622 | Msa0268340:CDS | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr2_2:70197604-70197623 | Msa0268340:CDS | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | + | chr2_2:70198589-70198608 | None:intergenic | 45.0% | |
| !!! | ATATTTATATTTGTTATATA+AGG | + | chr2_2:70198416-70198435 | None:intergenic | 5.0% |
| !!! | ATATTTATATTTGTTATATA+AGG | + | chr2_2:70198416-70198435 | None:intergenic | 5.0% |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr2_2:70197491-70197510 | Msa0268340:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr2_2:70197505-70197524 | Msa0268340:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr2_2:70197512-70197531 | Msa0268340:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | chr2_2:70197575-70197594 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr2_2:70197605-70197624 | Msa0268340:CDS | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr2_2:70198103-70198122 | Msa0268340:intron | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | - | chr2_2:70198328-70198347 | Msa0268340:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | - | chr2_2:70198571-70198590 | Msa0268340:intron | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | - | chr2_2:70198572-70198591 | Msa0268340:intron | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | + | chr2_2:70198584-70198603 | None:intergenic | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr2_2:70197491-70197510 | Msa0268340:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr2_2:70197505-70197524 | Msa0268340:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr2_2:70197512-70197531 | Msa0268340:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | chr2_2:70197575-70197594 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr2_2:70197605-70197624 | Msa0268340:CDS | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr2_2:70198103-70198122 | Msa0268340:intron | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | - | chr2_2:70198328-70198347 | Msa0268340:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | - | chr2_2:70198571-70198590 | Msa0268340:intron | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | - | chr2_2:70198572-70198591 | Msa0268340:intron | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | + | chr2_2:70198584-70198603 | None:intergenic | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr2_2:70197522-70197541 | Msa0268340:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr2_2:70198105-70198124 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr2_2:70198102-70198121 | Msa0268340:intron | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | - | chr2_2:70198573-70198592 | Msa0268340:intron | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | - | chr2_2:70198574-70198593 | Msa0268340:intron | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | + | chr2_2:70198583-70198602 | None:intergenic | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr2_2:70197522-70197541 | Msa0268340:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr2_2:70198105-70198124 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr2_2:70198102-70198121 | Msa0268340:intron | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | - | chr2_2:70198573-70198592 | Msa0268340:intron | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | - | chr2_2:70198574-70198593 | Msa0268340:intron | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | + | chr2_2:70198583-70198602 | None:intergenic | 55.0% | |
| TCGATCCCCCGATTGGATCG+GGG | + | chr2_2:70198582-70198601 | None:intergenic | 60.0% | |
| TCGATCCCCCGATTGGATCG+GGG | + | chr2_2:70198582-70198601 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70197432 | 70198853 | 70197432 | ID=Msa0268340;Name=Msa0268340 |
| chr2_2 | mRNA | 70197432 | 70198853 | 70197432 | ID=Msa0268340-mRNA-1;Parent=Msa0268340;Name=Msa0268340-mRNA-1;_AED=0.31;_eAED=0.36;_QI=0|0|0|1|0|0|3|0|177 |
| chr2_2 | exon | 70198721 | 70198853 | 70198721 | ID=Msa0268340-mRNA-1:exon:22538;Parent=Msa0268340-mRNA-1 |
| chr2_2 | exon | 70198086 | 70198120 | 70198086 | ID=Msa0268340-mRNA-1:exon:22537;Parent=Msa0268340-mRNA-1 |
| chr2_2 | exon | 70197432 | 70197797 | 70197432 | ID=Msa0268340-mRNA-1:exon:22536;Parent=Msa0268340-mRNA-1 |
| chr2_2 | CDS | 70198721 | 70198853 | 70198721 | ID=Msa0268340-mRNA-1:cds;Parent=Msa0268340-mRNA-1 |
| chr2_2 | CDS | 70198086 | 70198120 | 70198086 | ID=Msa0268340-mRNA-1:cds;Parent=Msa0268340-mRNA-1 |
| chr2_2 | CDS | 70197432 | 70197797 | 70197432 | ID=Msa0268340-mRNA-1:cds;Parent=Msa0268340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
