AlfalfaGEDB | Msa0582620

M. sativa cultivar zhongmu-4 / Msa0582620

KEGG: K02710|K02712
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
PFAM: PF02533.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0582620	RDY14692.1	90.722	97	9	0	1	97	4	100	7.75e-56	178

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0582620	sp\|Q49L15\|PSBK_EUCGG	91.667	60	5	0	1	60	1	60	1.80e-32	110

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0582620	A0A371II05	90.722	97	9	0	1	97	4	100	3.70e-56	178

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003470	Msa0582620	0.810616	1.055043e-50	-8.615850e-47
Msa0017120	Msa0582620	0.811446	6.974296e-51	-8.615850e-47
Msa0035090	Msa0582620	0.813311	2.729911e-51	-8.615850e-47
Msa0039200	Msa0582620	0.821003	5.085285e-53	-8.615850e-47
Msa0057740	Msa0582620	0.810234	1.275519e-50	-8.615850e-47
Msa0065390	Msa0582620	0.807921	3.991814e-50	-8.615850e-47
Msa0083570	Msa0582620	0.802842	4.630648e-49	-8.615850e-47
Msa0086820	Msa0582620	0.821314	4.313415e-53	-8.615850e-47
Msa0087880	Msa0582620	0.814132	1.799810e-51	-8.615850e-47
Msa0089210	Msa0582620	0.806818	6.838527e-50	-8.615850e-47
Msa0092750	Msa0582620	0.806263	8.952883e-50	-8.615850e-47
Msa0094420	Msa0582620	0.802485	5.487397e-49	-8.615850e-47
Msa0095140	Msa0582620	0.864902	8.704016e-65	-8.615850e-47
Msa0095200	Msa0582620	0.849899	2.404490e-60	-8.615850e-47
Msa0095240	Msa0582620	0.825415	4.745639e-54	-8.615850e-47
Msa0095270	Msa0582620	0.863079	3.215394e-64	-8.615850e-47
Msa0102410	Msa0582620	0.804045	2.607575e-49	-8.615850e-47
Msa0103060	Msa0582620	0.810585	1.071648e-50	-8.615850e-47
Msa0110710	Msa0582620	0.809929	1.484148e-50	-8.615850e-47
Msa0125230	Msa0582620	0.811276	7.592043e-51	-8.615850e-47
Msa0130120	Msa0582620	0.820522	6.559968e-53	-8.615850e-47
Msa0132620	Msa0582620	0.808371	3.200891e-50	-8.615850e-47
Msa0133670	Msa0582620	0.822627	2.141304e-53	-8.615850e-47
Msa0133880	Msa0582620	0.827821	1.266018e-54	-8.615850e-47
Msa0134550	Msa0582620	0.801544	8.566103e-49	-8.615850e-47
Msa0139740	Msa0582620	0.828632	8.069963e-55	-8.615850e-47
Msa0141670	Msa0582620	0.825339	4.946771e-54	-8.615850e-47
Msa0146470	Msa0582620	0.801933	7.125765e-49	-8.615850e-47
Msa0157020	Msa0582620	0.813218	2.860504e-51	-8.615850e-47
Msa0175900	Msa0582620	0.828353	9.423077e-55	-8.615850e-47
Msa0184120	Msa0582620	0.824094	9.722896e-54	-8.615850e-47
Msa0185390	Msa0582620	0.817409	3.346798e-52	-8.615850e-47
Msa0190000	Msa0582620	0.833547	5.008692e-56	-8.615850e-47
Msa0221860	Msa0582620	0.823550	1.303743e-53	-8.615850e-47
Msa0222070	Msa0582620	0.820951	5.227656e-53	-8.615850e-47
Msa0222120	Msa0582620	0.820850	5.514636e-53	-8.615850e-47
Msa0224960	Msa0582620	0.805943	1.045870e-49	-8.615850e-47
Msa0225010	Msa0582620	0.804677	1.926136e-49	-8.615850e-47
Msa0227290	Msa0582620	0.813571	2.392761e-51	-8.615850e-47
Msa0365150	Msa0582620	0.808823	2.562261e-50	-8.615850e-47
Msa0377460	Msa0582620	0.809222	2.105158e-50	-8.615850e-47
Msa0380420	Msa0582620	0.808540	2.945278e-50	-8.615850e-47
Msa0417630	Msa0582620	0.827945	1.181620e-54	-8.615850e-47
Msa0420070	Msa0582620	0.805601	1.233805e-49	-8.615850e-47
Msa0421800	Msa0582620	0.815911	7.251171e-52	-8.615850e-47
Msa0423110	Msa0582620	0.814168	1.767664e-51	-8.615850e-47
Msa0427050	Msa0582620	0.826556	2.542433e-54	-8.615850e-47
Msa0449930	Msa0582620	0.804034	2.622395e-49	-8.615850e-47
Msa0464500	Msa0582620	0.806382	8.452358e-50	-8.615850e-47
Msa0467800	Msa0582620	0.806816	6.845021e-50	-8.615850e-47
Msa0467880	Msa0582620	0.806447	8.188342e-50	-8.615850e-47
Msa0473320	Msa0582620	0.804116	2.520618e-49	-8.615850e-47
Msa0473450	Msa0582620	0.834060	3.728397e-56	-8.615850e-47
Msa0482020	Msa0582620	0.813811	2.118884e-51	-8.615850e-47
Msa0253410	Msa0582620	0.811470	6.889414e-51	-8.615850e-47
Msa0257130	Msa0582620	0.821117	4.788777e-53	-8.615850e-47
Msa0263430	Msa0582620	0.805079	1.587181e-49	-8.615850e-47
Msa0263620	Msa0582620	0.819493	1.128566e-52	-8.615850e-47
Msa0268180	Msa0582620	0.903018	5.347197e-79	-8.615850e-47
Msa0268220	Msa0582620	0.823191	1.581933e-53	-8.615850e-47
Msa0268340	Msa0582620	0.837752	4.318004e-57	-8.615850e-47
Msa0268380	Msa0582620	0.885132	1.057815e-71	-8.615850e-47
Msa0268420	Msa0582620	0.902244	1.181351e-78	-8.615850e-47
Msa0268460	Msa0582620	0.840876	6.677895e-58	-8.615850e-47
Msa0268500	Msa0582620	0.840957	6.358603e-58	-8.615850e-47
Msa0268540	Msa0582620	0.909331	6.408975e-82	-8.615850e-47
Msa0268650	Msa0582620	0.876706	1.128056e-68	-8.615850e-47
Msa0268690	Msa0582620	0.851459	8.752011e-61	-8.615850e-47
Msa0268730	Msa0582620	0.897315	1.583570e-76	-8.615850e-47
Msa0268850	Msa0582620	0.903751	2.509380e-79	-8.615850e-47
Msa0268900	Msa0582620	0.844072	9.478405e-59	-8.615850e-47
Msa0268930	Msa0582620	0.881661	1.994006e-70	-8.615850e-47
Msa0269060	Msa0582620	0.920442	1.273233e-87	-8.615850e-47
Msa0269100	Msa0582620	0.830731	2.490106e-55	-8.615850e-47
Msa0301020	Msa0582620	0.803977	2.693922e-49	-8.615850e-47
Msa0301460	Msa0582620	0.817182	3.764407e-52	-8.615850e-47
Msa0301800	Msa0582620	0.820558	6.437283e-53	-8.615850e-47
Msa0304870	Msa0582620	0.824276	8.810644e-54	-8.615850e-47
Msa0306130	Msa0582620	0.827722	1.337425e-54	-8.615850e-47
Msa0341260	Msa0582620	0.825830	3.783718e-54	-8.615850e-47
Msa0344200	Msa0582620	0.873086	1.930738e-67	-8.615850e-47
Msa0344240	Msa0582620	0.842862	1.995469e-58	-8.615850e-47
Msa0344250	Msa0582620	0.820997	5.101805e-53	-8.615850e-47
Msa0487560	Msa0582620	0.808277	3.351137e-50	-8.615850e-47
Msa0487620	Msa0582620	0.802749	4.840453e-49	-8.615850e-47
Msa0514260	Msa0582620	0.812663	3.784854e-51	-8.615850e-47
Msa0517400	Msa0582620	0.802924	4.454287e-49	-8.615850e-47
Msa0530210	Msa0582620	0.810101	1.362324e-50	-8.615850e-47
Msa0540340	Msa0582620	0.805594	1.237873e-49	-8.615850e-47
Msa0542040	Msa0582620	0.817786	2.751983e-52	-8.615850e-47
Msa0547050	Msa0582620	0.824187	9.246368e-54	-8.615850e-47
Msa0558890	Msa0582620	0.817195	3.739327e-52	-8.615850e-47
Msa0560180	Msa0582620	0.806938	6.451722e-50	-8.615850e-47
Msa0577870	Msa0582620	0.815411	9.371239e-52	-8.615850e-47
Msa0582530	Msa0582620	0.860392	2.132766e-63	-8.615850e-47
Msa0582570	Msa0582620	0.821907	3.146178e-53	-8.615850e-47
Msa0582580	Msa0582620	0.840131	1.045887e-57	-8.615850e-47
Msa0582620	Msa0582710	0.882607	9.043186e-71	-8.615850e-47
Msa0582620	Msa0582740	0.923289	3.229222e-89	-8.615850e-47
Msa0582620	Msa0582830	0.860222	2.400320e-63	-8.615850e-47
Msa0582620	Msa0582900	0.901840	1.782283e-78	-8.615850e-47
Msa0582620	Msa0591370	0.811275	7.596872e-51	-8.615850e-47
Msa0582620	Msa0595780	0.803961	2.715458e-49	-8.615850e-47
Msa0582620	Msa0600390	0.813919	2.006242e-51	-8.615850e-47
Msa0582620	Msa0601780	0.831541	1.574321e-55	-8.615850e-47
Msa0582620	Msa0606060	0.810145	1.333070e-50	-8.615850e-47
Msa0582620	Msa0606140	0.808817	2.570963e-50	-8.615850e-47
Msa0582620	Msa0606680	0.803373	3.595594e-49	-8.615850e-47
Msa0582620	Msa0619330	0.803122	4.053437e-49	-8.615850e-47
Msa0582620	Msa0622390	0.813859	2.067505e-51	-8.615850e-47
Msa0582620	Msa0624240	0.805840	1.099018e-49	-8.615850e-47
Msa0582620	Msa0635990	0.803136	4.024887e-49	-8.615850e-47
Msa0582620	Msa0640880	0.824766	6.755416e-54	-8.615850e-47
Msa0582620	Msa0653710	0.808587	2.878076e-50	-8.615850e-47
Msa0582620	Msa0654060	0.808609	2.846827e-50	-8.615850e-47
Msa0582620	Msa0659960	0.810545	1.092730e-50	-8.615850e-47
Msa0582620	Msa0662850	0.824613	7.341303e-54	-8.615850e-47
Msa0582620	Msa0681890	0.829786	4.236433e-55	-8.615850e-47
Msa0582620	Msa0686610	0.823396	1.416809e-53	-8.615850e-47
Msa0582620	Msa0698880	0.811296	7.514523e-51	-8.615850e-47
Msa0582620	Msa0698900	0.808968	2.386647e-50	-8.615850e-47
Msa0582620	Msa0702070	0.821147	4.712401e-53	-8.615850e-47
Msa0582620	Msa0702120	0.808533	2.955323e-50	-8.615850e-47
Msa0582620	Msa0703720	0.807832	4.169502e-50	-8.615850e-47
Msa0582620	Msa0704990	0.809802	1.580563e-50	-8.615850e-47
Msa0582620	Msa0705030	0.822694	2.065468e-53	-8.615850e-47
Msa0582620	Msa0706710	0.813746	2.190239e-51	-8.615850e-47
Msa0582620	Msa0727020	0.822899	1.850103e-53	-8.615850e-47
Msa0582620	Msa0736930	0.812544	4.019559e-51	-8.615850e-47
Msa0582620	Msa0739570	0.825229	5.252750e-54	-8.615850e-47
Msa0582620	Msa0766880	0.836808	7.533054e-57	-8.615850e-47
Msa0582620	Msa0772210	0.840421	8.783834e-58	-8.615850e-47
Msa0582620	Msa0782330	0.825029	5.856248e-54	-8.615850e-47
Msa0582620	Msa0786090	0.807550	4.784323e-50	-8.615850e-47
Msa0582620	Msa0796450	0.816978	4.183892e-52	-8.615850e-47
Msa0582620	Msa0804930	0.831374	1.731177e-55	-8.615850e-47
Msa0582620	Msa0855490	0.807890	4.052640e-50	-8.615850e-47
Msa0582620	Msa0860270	0.821427	4.061822e-53	-8.615850e-47
Msa0582620	Msa0900320	0.831598	1.524275e-55	-8.615850e-47
Msa0582620	Msa0910650	0.809801	1.580877e-50	-8.615850e-47
Msa0582620	Msa0924860	0.861308	1.123711e-63	-8.615850e-47
Msa0582620	Msa0924890	0.813316	2.722809e-51	-8.615850e-47
Msa0582620	Msa0925020	0.814477	1.510478e-51	-8.615850e-47
Msa0582620	Msa0926860	0.800306	1.533107e-48	-8.615850e-47
Msa0582620	Msa0931090	0.867281	1.535797e-65	-8.615850e-47
Msa0582620	Msa0931150	0.871789	5.226878e-67	-8.615850e-47
Msa0582620	Msa0931200	0.863210	2.928610e-64	-8.615850e-47
Msa0582620	Msa0931280	0.856723	2.652752e-62	-8.615850e-47
Msa0582620	Msa0958020	0.843929	1.035457e-58	-8.615850e-47
Msa0582620	Msa0965960	0.812947	3.280231e-51	-8.615850e-47
Msa0582620	Msa0971860	0.808297	3.318669e-50	-8.615850e-47
Msa0582620	Msa0978000	0.809922	1.489478e-50	-8.615850e-47
Msa0582620	Msa0983670	0.817097	3.934172e-52	-8.615850e-47
Msa0582620	Msa0983710	0.843026	1.804886e-58	-8.615850e-47
Msa0582620	Msa0990520	0.810376	1.188647e-50	-8.615850e-47
Msa0582620	Msa0992570	0.851943	6.382351e-61	-8.615850e-47
Msa0582620	Msa0992590	0.839782	1.289773e-57	-8.615850e-47
Msa0582620	Msa1002040	0.848065	7.771021e-60	-8.615850e-47
Msa0582620	Msa1022310	0.815173	1.058955e-51	-8.615850e-47
Msa0582620	Msa1024580	0.818296	2.110850e-52	-8.615850e-47
Msa0582620	Msa1030280	0.847101	1.431137e-59	-8.615850e-47
Msa0582620	Msa1040770	0.800517	1.388576e-48	-8.615850e-47
Msa0582620	Msa1049440	0.826150	3.177536e-54	-8.615850e-47
Msa0582620	Msa1061180	0.803574	3.266621e-49	-8.615850e-47
Msa0582620	Msa1070900	0.806856	6.714461e-50	-8.615850e-47
Msa0582620	Msa1079610	0.808278	3.350767e-50	-8.615850e-47
Msa0582620	Msa1086020	0.845601	3.668189e-59	-8.615850e-47
Msa0582620	Msa1086060	0.901242	3.265523e-78	-8.615850e-47
Msa0582620	Msa1086160	0.860208	2.423765e-63	-8.615850e-47
Msa0582620	Msa1086170	0.890241	1.177309e-73	-8.615850e-47
Msa0582620	Msa1086260	0.820880	5.429941e-53	-8.615850e-47
Msa0582620	Msa1086290	0.891924	2.545220e-74	-8.615850e-47
Msa0582620	Msa1086330	0.816713	4.799410e-52	-8.615850e-47
Msa0582620	Msa1086340	0.855758	5.090096e-62	-8.615850e-47
Msa0582620	Msa1086370	0.885733	6.301152e-72	-8.615850e-47
Msa0582620	Msa1086440	0.830363	3.063758e-55	-8.615850e-47
Msa0582620	Msa1086480	0.863085	3.202313e-64	-8.615850e-47
Msa0582620	Msa1086520	0.822792	1.959483e-53	-8.615850e-47
Msa0582620	Msa1086630	0.836050	1.174066e-56	-8.615850e-47
Msa0582620	Msa1086690	0.825949	3.546799e-54	-8.615850e-47
Msa0582620	Msa1086830	0.830281	3.207272e-55	-8.615850e-47
Msa0582620	Msa1086870	0.883968	2.862224e-71	-8.615850e-47
Msa0582620	Msa1087000	0.806262	8.959220e-50	-8.615850e-47
Msa0582620	Msa1090230	0.815545	8.752005e-52	-8.615850e-47
Msa0582620	Msa1091690	0.834398	3.066521e-56	-8.615850e-47
Msa0582620	Msa1102180	0.808618	2.835264e-50	-8.615850e-47
Msa0582620	Msa1123340	0.823372	1.435466e-53	-8.615850e-47
Msa0582620	Msa1124440	0.813654	2.294728e-51	-8.615850e-47
Msa0582620	Msa1143140	0.904743	8.920760e-80	-8.615850e-47
Msa0582620	Msa1143150	0.819801	9.595093e-53	-8.615850e-47
Msa0582620	Msa1157160	0.854271	1.375703e-61	-8.615850e-47
Msa0582620	Msa1166180	0.818623	1.779548e-52	-8.615850e-47
Msa0582620	Msa1166280	0.816468	5.444657e-52	-8.615850e-47
Msa0582620	Msa1195860	0.832659	8.333710e-56	-8.615850e-47
Msa0582620	Msa1198420	0.803545	3.311644e-49	-8.615850e-47
Msa0582620	Msa1209390	0.811287	7.548607e-51	-8.615850e-47
Msa0582620	Msa1215210	0.819946	8.889161e-53	-8.615850e-47
Msa0582620	Msa1218720	0.800812	1.209361e-48	-8.615850e-47
Msa0582620	Msa1220740	0.815732	7.952554e-52	-8.615850e-47
Msa0582620	Msa1248400	0.815596	8.526016e-52	-8.615850e-47
Msa0582620	Msa1284030	0.827248	1.737282e-54	-8.615850e-47
Msa0582620	Msa1298740	0.802317	5.942370e-49	-8.615850e-47
Msa0582620	Msa1309910	0.816841	4.491182e-52	-8.615850e-47
Msa0582620	Msa1323060	0.821539	3.827276e-53	-8.615850e-47
Msa0582620	Msa1325980	0.807597	4.675691e-50	-8.615850e-47
Msa0582620	Msa1327820	0.838092	3.530078e-57	-8.615850e-47
Msa0582620	Msa1334650	0.806709	7.212231e-50	-8.615850e-47
Msa0582620	Msa1352820	0.815095	1.101861e-51	-8.615850e-47
Msa0582620	Msa1354850	0.852018	6.077052e-61	-8.615850e-47
Msa0582620	Msa1354890	0.879970	8.060611e-70	-8.615850e-47
Msa0582620	Msa1355020	0.838956	2.113169e-57	-8.615850e-47
Msa0582620	Msa1355060	0.886581	3.020013e-72	-8.615850e-47
Msa0582620	Msa1367940	0.805439	1.334333e-49	-8.615850e-47
Msa0582620	Msa1368730	0.803834	2.885104e-49	-8.615850e-47
Msa0582620	Msa1371250	0.820803	5.654982e-53	-8.615850e-47
Msa0582620	Msa1375630	0.807944	3.946456e-50	-8.615850e-47
Msa0582620	Msa1376530	0.810499	1.117974e-50	-8.615850e-47
Msa0582620	Msa1380540	0.834546	2.814976e-56	-8.615850e-47
Msa0582620	Msa1380580	0.805674	1.191222e-49	-8.615850e-47
Msa0582620	Msa1381130	0.818993	1.466949e-52	-8.615850e-47
Msa0582620	Msa1385940	0.836006	1.204611e-56	-8.615850e-47
Msa0582620	Msa1394050	0.839571	1.463409e-57	-8.615850e-47
Msa0582620	Msa1394090	0.840648	7.662745e-58	-8.615850e-47
Msa0582620	Msa1394100	0.837337	5.515526e-57	-8.615850e-47
Msa0582620	Msa1394140	0.849953	2.321774e-60	-8.615850e-47
Msa0582620	Msa1394240	0.849214	3.733847e-60	-8.615850e-47
Msa0582620	Msa1394280	0.828092	1.089276e-54	-8.615850e-47
Msa0582620	Msa1406230	0.810366	1.194426e-50	-8.615850e-47
Msa0582620	Msa1415120	0.823690	1.209205e-53	-8.615850e-47
Msa0582620	Msa1422750	0.832960	7.013738e-56	-8.615850e-47
Msa0582620	Msa1435470	0.824311	8.644958e-54	-8.615850e-47
Msa0582620	Msa1442300	0.809981	1.446249e-50	-8.615850e-47
Msa0582620	Msa1458920	0.810894	9.187721e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0582620	MtrunA17_Chr4g0015681	96.667	60	2	1	60	1	60	7.64e-35	113
Msa0582620	MtrunA17_CPg0492901	96.667	60	2	1	60	1	60	7.64e-35	113
Msa0582620	MtrunA17_Chr4g0016771	96.667	60	2	1	60	1	60	7.64e-35	113

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0582620	ATCG00070.1	76.667	60	14	0	1	60	1	60	3.76e-26	92.0
Msa0582620	ATCG00080.1	97.222	36	1	0	62	97	1	36	2.92e-19	73.9

Find 6 sgRNAs with CRISPR-Local

Find 30 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGCTTAATATCTTTAGCT+TGG	0.440922	4_2:+1113106	None:intergenic
ACTGGCATAAAATCTACAAT+TGG	0.453871	4_2:-1113209	None:intergenic
AATGATCCAGGACGTAATCC+TGG	0.474800	4_2:+1113756	Msa0582620:CDS
GGATTCCTATCTAATGATCC+AGG	0.536202	4_2:+1113744	Msa0582620:CDS
TCACGTCCAGGATTACGTCC+TGG	0.548081	4_2:-1113762	None:intergenic
TACGTCCTGGATCATTAGAT+AGG	0.581605	4_2:-1113749	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTCCAAATATTAAAATTTT+TGG	+	chr4_2:1113396-1113415	Msa0582620:intron	10.0%
!!!	TATCCAAAAATTTTAATATT+TGG	-	chr4_2:1113402-1113421	None:intergenic	10.0%
!!	ATTTCAAAAAAAAAAAACTT+AGG	-	chr4_2:1113553-1113572	None:intergenic	10.0%
!!!	AATTTTAATATTTGGAATCA+AGG	-	chr4_2:1113394-1113413	None:intergenic	15.0%
!!!	CGTTTTTTTTTTAATTATCT+TGG	+	chr4_2:1113648-1113667	Msa0582620:intron	15.0%
!!	GAAAAAACTACTTGAATAAA+GGG	-	chr4_2:1113153-1113172	None:intergenic	20.0%
!!	AGAAAAAACTACTTGAATAA+AGG	-	chr4_2:1113154-1113173	None:intergenic	20.0%
!!!	TTATTCAAGTAGTTTTTTCT+TGG	+	chr4_2:1113154-1113173	Msa0582620:CDS	20.0%
!!	TGAAAATTCTATTATTCGAT+TGG	+	chr4_2:1113440-1113459	Msa0582620:intron	20.0%
!!!	TGTGGATATGAAAAAAATTT+TGG	+	chr4_2:1113491-1113510	Msa0582620:intron	20.0%
!!	TCTTATAAACTTAGTATCAA+AGG	+	chr4_2:1113582-1113601	Msa0582620:intron	20.0%
!!!	TTTTTCTCTTAGCTTTTGTT+TGG	+	chr4_2:1113246-1113265	Msa0582620:CDS	25.0%
!!!	TTTGTTTCTCTTTTCATCTT+CGG	+	chr4_2:1113723-1113742	Msa0582620:CDS	25.0%
!	AATTGGATTCAAAAAAGCGT+AGG	-	chr4_2:1113195-1113214	None:intergenic	30.0%
	ACTGGCATAAAATCTACAAT+TGG	-	chr4_2:1113212-1113231	None:intergenic	30.0%
!!	AAAAAGAGTAAGGGTATTAC+TGG	-	chr4_2:1113230-1113249	None:intergenic	30.0%
	GCTAAGAGAAAAAAGAGTAA+GGG	-	chr4_2:1113239-1113258	None:intergenic	30.0%
	AGCTAAGAGAAAAAAGAGTA+AGG	-	chr4_2:1113240-1113259	None:intergenic	30.0%
!!	AATCAAGATCTAGGTATTGG+TGG	-	chr4_2:1113472-1113491	None:intergenic	35.0%
	CACAATCAAGATCTAGGTAT+TGG	-	chr4_2:1113475-1113494	None:intergenic	35.0%
	CAATACCTAGATCTTGATTG+TGG	+	chr4_2:1113473-1113492	Msa0582620:intron	35.0%
	CATATCCACAATCAAGATCT+AGG	-	chr4_2:1113481-1113500	None:intergenic	35.0%
	GAGAATCTATTCTCTTTCTC+TGG	+	chr4_2:1113625-1113644	Msa0582620:intron	35.0%
!	TTCAAAAAAGCGTAGGCTTC+AGG	-	chr4_2:1113188-1113207	None:intergenic	40.0%
	GGATTCCTATCTAATGATCC+AGG	+	chr4_2:1113744-1113763	Msa0582620:CDS	40.0%
	TACGTCCTGGATCATTAGAT+AGG	-	chr4_2:1113752-1113771	None:intergenic	40.0%
!!	CAAGATCTAGGTATTGGTGG+TGG	-	chr4_2:1113469-1113488	None:intergenic	45.0%
	AATGATCCAGGACGTAATCC+TGG	+	chr4_2:1113756-1113775	Msa0582620:CDS	45.0%
!!!	AATAAATTCTTAATTTTTTT+CGG	-	chr4_2:1113317-1113336	None:intergenic	5.0%
	TCACGTCCAGGATTACGTCC+TGG	-	chr4_2:1113765-1113784	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_2	gene	1113107	1113791	1113107	ID=Msa0582620;Name=Msa0582620
chr4_2	mRNA	1113107	1113791	1113107	ID=Msa0582620-mRNA-1;Parent=Msa0582620;Name=Msa0582620-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0\|0\|0\|1\|0\|0\|2\|0\|97
chr4_2	exon	1113107	1113281	1113107	ID=Msa0582620-mRNA-1:exon:261;Parent=Msa0582620-mRNA-1
chr4_2	exon	1113673	1113791	1113673	ID=Msa0582620-mRNA-1:exon:262;Parent=Msa0582620-mRNA-1
chr4_2	CDS	1113107	1113281	1113107	ID=Msa0582620-mRNA-1:cds;Parent=Msa0582620-mRNA-1
chr4_2	CDS	1113673	1113791	1113673	ID=Msa0582620-mRNA-1:cds;Parent=Msa0582620-mRNA-1

Gene Sequence	>Msa0582620 ATGCTTAATATCTTTAGCTTGGTCTGTATTTGTATTGACTCTGCCCTTTATTCAAGTAGTTTTTTCTTGGCAAAATTACCTGAAGCCTACGCTTTTTTGAATCCAATTGTAGATTTTATGCCAGTAATACCCTTACTCTTTTTTCTCTTAGCTTTTGTTTGGCAAGCTGCTGTAAATTTTGTAATGCTTACTCTAAAACTATTTGTTTACACGATAGTGATATTCTTTGTTTCTCTTTTCATCTTCGGATTCCTATCTAATGATCCAGGACGTAATCCTGGACGTGAAGAATAA
Protein sequence	>Msa0582620 MLNIFSLVCICIDSALYSSSFFLAKLPEAYAFLNPIVDFMPVIPLLFFLLAFVWQAAVNFVMLTLKLFVYTIVIFFVSLFIFGFLSNDPGRNPGREE*