Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268650 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268650 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268650 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032040 | Msa0268650 | 0.801100 | 1.055733e-48 | -8.615850e-47 |
| Msa0035090 | Msa0268650 | 0.840716 | 7.355617e-58 | -8.615850e-47 |
| Msa0039200 | Msa0268650 | 0.819802 | 9.589322e-53 | -8.615850e-47 |
| Msa0040190 | Msa0268650 | 0.836969 | 6.850098e-57 | -8.615850e-47 |
| Msa0065190 | Msa0268650 | 0.803930 | 2.756269e-49 | -8.615850e-47 |
| Msa0065390 | Msa0268650 | 0.802172 | 6.363768e-49 | -8.615850e-47 |
| Msa0083570 | Msa0268650 | 0.813149 | 2.962205e-51 | -8.615850e-47 |
| Msa0086820 | Msa0268650 | 0.821566 | 3.772561e-53 | -8.615850e-47 |
| Msa0087880 | Msa0268650 | 0.811793 | 5.860556e-51 | -8.615850e-47 |
| Msa0092750 | Msa0268650 | 0.841728 | 3.985303e-58 | -8.615850e-47 |
| Msa0094420 | Msa0268650 | 0.803423 | 3.510917e-49 | -8.615850e-47 |
| Msa0095140 | Msa0268650 | 0.882699 | 8.366828e-71 | -8.615850e-47 |
| Msa0095180 | Msa0268650 | 0.809028 | 2.316595e-50 | -8.615850e-47 |
| Msa0095200 | Msa0268650 | 0.887111 | 1.901626e-72 | -8.615850e-47 |
| Msa0095240 | Msa0268650 | 0.865102 | 7.529855e-65 | -8.615850e-47 |
| Msa0095270 | Msa0268650 | 0.884039 | 2.695249e-71 | -8.615850e-47 |
| Msa0099830 | Msa0268650 | 0.815829 | 7.566051e-52 | -8.615850e-47 |
| Msa0103060 | Msa0268650 | 0.802469 | 5.526973e-49 | -8.615850e-47 |
| Msa0103780 | Msa0268650 | 0.806115 | 9.621566e-50 | -8.615850e-47 |
| Msa0110710 | Msa0268650 | 0.805341 | 1.398689e-49 | -8.615850e-47 |
| Msa0123940 | Msa0268650 | 0.805638 | 1.211949e-49 | -8.615850e-47 |
| Msa0124070 | Msa0268650 | 0.810592 | 1.067669e-50 | -8.615850e-47 |
| Msa0130120 | Msa0268650 | 0.826311 | 2.908106e-54 | -8.615850e-47 |
| Msa0133670 | Msa0268650 | 0.821342 | 4.248454e-53 | -8.615850e-47 |
| Msa0133880 | Msa0268650 | 0.825566 | 4.372579e-54 | -8.615850e-47 |
| Msa0134550 | Msa0268650 | 0.839885 | 1.212238e-57 | -8.615850e-47 |
| Msa0139740 | Msa0268650 | 0.827025 | 1.964492e-54 | -8.615850e-47 |
| Msa0141670 | Msa0268650 | 0.819619 | 1.056044e-52 | -8.615850e-47 |
| Msa0156780 | Msa0268650 | 0.829463 | 5.077403e-55 | -8.615850e-47 |
| Msa0175900 | Msa0268650 | 0.836207 | 1.071096e-56 | -8.615850e-47 |
| Msa0180980 | Msa0268650 | 0.807698 | 4.450740e-50 | -8.615850e-47 |
| Msa0184120 | Msa0268650 | 0.825953 | 3.538309e-54 | -8.615850e-47 |
| Msa0186750 | Msa0268650 | 0.809082 | 2.256203e-50 | -8.615850e-47 |
| Msa0189050 | Msa0268650 | 0.802065 | 6.693688e-49 | -8.615850e-47 |
| Msa0190000 | Msa0268650 | 0.818579 | 1.821420e-52 | -8.615850e-47 |
| Msa0202630 | Msa0268650 | 0.808807 | 2.583278e-50 | -8.615850e-47 |
| Msa0216010 | Msa0268650 | 0.804939 | 1.697833e-49 | -8.615850e-47 |
| Msa0221860 | Msa0268650 | 0.861817 | 7.856442e-64 | -8.615850e-47 |
| Msa0222070 | Msa0268650 | 0.826760 | 2.272739e-54 | -8.615850e-47 |
| Msa0222120 | Msa0268650 | 0.826910 | 2.092718e-54 | -8.615850e-47 |
| Msa0224960 | Msa0268650 | 0.813179 | 2.918087e-51 | -8.615850e-47 |
| Msa0225010 | Msa0268650 | 0.812733 | 3.653674e-51 | -8.615850e-47 |
| Msa0227290 | Msa0268650 | 0.826106 | 3.254432e-54 | -8.615850e-47 |
| Msa0231310 | Msa0268650 | 0.802262 | 6.097622e-49 | -8.615850e-47 |
| Msa0240290 | Msa0268650 | 0.810458 | 1.141077e-50 | -8.615850e-47 |
| Msa0253410 | Msa0268650 | 0.819095 | 1.390142e-52 | -8.615850e-47 |
| Msa0256170 | Msa0268650 | 0.808284 | 3.339606e-50 | -8.615850e-47 |
| Msa0263620 | Msa0268650 | 0.828291 | 9.753063e-55 | -8.615850e-47 |
| Msa0268180 | Msa0268650 | 0.940029 | 4.684679e-100 | -8.615850e-47 |
| Msa0268220 | Msa0268650 | 0.855195 | 7.424070e-62 | -8.615850e-47 |
| Msa0268340 | Msa0268650 | 0.867302 | 1.512573e-65 | -8.615850e-47 |
| Msa0268380 | Msa0268650 | 0.904054 | 1.831937e-79 | -8.615850e-47 |
| Msa0268420 | Msa0268650 | 0.959951 | 5.202359e-118 | -8.615850e-47 |
| Msa0268460 | Msa0268650 | 0.863963 | 1.710715e-64 | -8.615850e-47 |
| Msa0268500 | Msa0268650 | 0.870816 | 1.095960e-66 | -8.615850e-47 |
| Msa0268540 | Msa0268650 | 0.930316 | 1.956944e-93 | -8.615850e-47 |
| Msa0268560 | Msa0268650 | 0.809745 | 1.625646e-50 | -8.615850e-47 |
| Msa0268650 | Msa0268680 | 0.824953 | 6.103333e-54 | -8.615850e-47 |
| Msa0268650 | Msa0268690 | 0.849203 | 3.758390e-60 | -8.615850e-47 |
| Msa0268650 | Msa0268730 | 0.896690 | 2.896495e-76 | -8.615850e-47 |
| Msa0268650 | Msa0268760 | 0.847327 | 1.240451e-59 | -8.615850e-47 |
| Msa0268650 | Msa0268850 | 0.938466 | 6.425554e-99 | -8.615850e-47 |
| Msa0268650 | Msa0268900 | 0.863244 | 2.858125e-64 | -8.615850e-47 |
| Msa0268650 | Msa0268930 | 0.882334 | 1.136239e-70 | -8.615850e-47 |
| Msa0268650 | Msa0269060 | 0.949968 | 4.329342e-108 | -8.615850e-47 |
| Msa0268650 | Msa0269100 | 0.869528 | 2.894712e-66 | -8.615850e-47 |
| Msa0268650 | Msa0284260 | 0.801910 | 7.205215e-49 | -8.615850e-47 |
| Msa0268650 | Msa0301460 | 0.809445 | 1.885919e-50 | -8.615850e-47 |
| Msa0268650 | Msa0301800 | 0.805581 | 1.245945e-49 | -8.615850e-47 |
| Msa0268650 | Msa0306130 | 0.825736 | 3.984182e-54 | -8.615850e-47 |
| Msa0268650 | Msa0307490 | 0.826381 | 2.798386e-54 | -8.615850e-47 |
| Msa0268650 | Msa0307750 | 0.809078 | 2.260096e-50 | -8.615850e-47 |
| Msa0268650 | Msa0309160 | 0.800600 | 1.335627e-48 | -8.615850e-47 |
| Msa0268650 | Msa0317630 | 0.820692 | 5.997227e-53 | -8.615850e-47 |
| Msa0268650 | Msa0324060 | 0.807772 | 4.293048e-50 | -8.615850e-47 |
| Msa0268650 | Msa0338900 | 0.811308 | 7.470345e-51 | -8.615850e-47 |
| Msa0268650 | Msa0344200 | 0.851014 | 1.168940e-60 | -8.615850e-47 |
| Msa0268650 | Msa0344250 | 0.859681 | 3.496659e-63 | -8.615850e-47 |
| Msa0268650 | Msa0365150 | 0.813983 | 1.942150e-51 | -8.615850e-47 |
| Msa0268650 | Msa0370510 | 0.812305 | 4.533212e-51 | -8.615850e-47 |
| Msa0268650 | Msa0377460 | 0.811698 | 6.145581e-51 | -8.615850e-47 |
| Msa0268650 | Msa0417630 | 0.803004 | 4.286727e-49 | -8.615850e-47 |
| Msa0268650 | Msa0421800 | 0.805368 | 1.380441e-49 | -8.615850e-47 |
| Msa0268650 | Msa0426860 | 0.834921 | 2.265791e-56 | -8.615850e-47 |
| Msa0268650 | Msa0426890 | 0.825861 | 3.720983e-54 | -8.615850e-47 |
| Msa0268650 | Msa0427050 | 0.833025 | 6.757204e-56 | -8.615850e-47 |
| Msa0268650 | Msa0449900 | 0.808221 | 3.445069e-50 | -8.615850e-47 |
| Msa0268650 | Msa0449930 | 0.821751 | 3.418249e-53 | -8.615850e-47 |
| Msa0268650 | Msa0456480 | 0.809315 | 2.010782e-50 | -8.615850e-47 |
| Msa0268650 | Msa0464500 | 0.820997 | 5.103548e-53 | -8.615850e-47 |
| Msa0268650 | Msa0473450 | 0.812750 | 3.622392e-51 | -8.615850e-47 |
| Msa0268650 | Msa0475830 | 0.819028 | 1.439938e-52 | -8.615850e-47 |
| Msa0268650 | Msa0482020 | 0.826549 | 2.551904e-54 | -8.615850e-47 |
| Msa0268650 | Msa0487560 | 0.810558 | 1.085615e-50 | -8.615850e-47 |
| Msa0268650 | Msa0487620 | 0.800186 | 1.622089e-48 | -8.615850e-47 |
| Msa0268650 | Msa0514260 | 0.807291 | 5.430175e-50 | -8.615850e-47 |
| Msa0268650 | Msa0517400 | 0.804596 | 2.002623e-49 | -8.615850e-47 |
| Msa0268650 | Msa0540340 | 0.800216 | 1.599212e-48 | -8.615850e-47 |
| Msa0268650 | Msa0550720 | 0.815782 | 7.750174e-52 | -8.615850e-47 |
| Msa0268650 | Msa0558890 | 0.808862 | 2.513501e-50 | -8.615850e-47 |
| Msa0268650 | Msa0577140 | 0.821454 | 4.002983e-53 | -8.615850e-47 |
| Msa0268650 | Msa0582530 | 0.886309 | 3.824968e-72 | -8.615850e-47 |
| Msa0268650 | Msa0582570 | 0.873528 | 1.371548e-67 | -8.615850e-47 |
| Msa0268650 | Msa0582580 | 0.858752 | 6.640822e-63 | -8.615850e-47 |
| Msa0268650 | Msa0582620 | 0.876706 | 1.128056e-68 | -8.615850e-47 |
| Msa0268650 | Msa0582640 | 0.803433 | 3.494099e-49 | -8.615850e-47 |
| Msa0268650 | Msa0582660 | 0.808848 | 2.531648e-50 | -8.615850e-47 |
| Msa0268650 | Msa0582710 | 0.922566 | 8.321336e-89 | -8.615850e-47 |
| Msa0268650 | Msa0582740 | 0.887892 | 9.564593e-73 | -8.615850e-47 |
| Msa0268650 | Msa0582830 | 0.923043 | 4.462477e-89 | -8.615850e-47 |
| Msa0268650 | Msa0582900 | 0.890969 | 6.087329e-74 | -8.615850e-47 |
| Msa0268650 | Msa0582930 | 0.827307 | 1.681737e-54 | -8.615850e-47 |
| Msa0268650 | Msa0586890 | 0.802223 | 6.212542e-49 | -8.615850e-47 |
| Msa0268650 | Msa0587060 | 0.822874 | 1.875482e-53 | -8.615850e-47 |
| Msa0268650 | Msa0591370 | 0.842325 | 2.770957e-58 | -8.615850e-47 |
| Msa0268650 | Msa0595780 | 0.822327 | 2.514110e-53 | -8.615850e-47 |
| Msa0268650 | Msa0606140 | 0.816229 | 6.159170e-52 | -8.615850e-47 |
| Msa0268650 | Msa0606680 | 0.803534 | 3.329527e-49 | -8.615850e-47 |
| Msa0268650 | Msa0619060 | 0.817414 | 3.338721e-52 | -8.615850e-47 |
| Msa0268650 | Msa0622390 | 0.804505 | 2.091479e-49 | -8.615850e-47 |
| Msa0268650 | Msa0624240 | 0.826138 | 3.197943e-54 | -8.615850e-47 |
| Msa0268650 | Msa0626890 | 0.812956 | 3.264957e-51 | -8.615850e-47 |
| Msa0268650 | Msa0635990 | 0.813532 | 2.440078e-51 | -8.615850e-47 |
| Msa0268650 | Msa0640880 | 0.803718 | 3.050303e-49 | -8.615850e-47 |
| Msa0268650 | Msa0647110 | 0.827198 | 1.786442e-54 | -8.615850e-47 |
| Msa0268650 | Msa0659640 | 0.817362 | 3.429731e-52 | -8.615850e-47 |
| Msa0268650 | Msa0665010 | 0.805781 | 1.130959e-49 | -8.615850e-47 |
| Msa0268650 | Msa0668630 | 0.823378 | 1.430574e-53 | -8.615850e-47 |
| Msa0268650 | Msa0677110 | 0.801908 | 7.211078e-49 | -8.615850e-47 |
| Msa0268650 | Msa0698900 | 0.803163 | 3.973833e-49 | -8.615850e-47 |
| Msa0268650 | Msa0702070 | 0.813365 | 2.655367e-51 | -8.615850e-47 |
| Msa0268650 | Msa0702120 | 0.809511 | 1.825174e-50 | -8.615850e-47 |
| Msa0268650 | Msa0704570 | 0.810995 | 8.735330e-51 | -8.615850e-47 |
| Msa0268650 | Msa0704750 | 0.824019 | 1.012593e-53 | -8.615850e-47 |
| Msa0268650 | Msa0705610 | 0.811469 | 6.894852e-51 | -8.615850e-47 |
| Msa0268650 | Msa0706710 | 0.811348 | 7.324282e-51 | -8.615850e-47 |
| Msa0268650 | Msa0708120 | 0.801510 | 8.704335e-49 | -8.615850e-47 |
| Msa0268650 | Msa0716670 | 0.807687 | 4.474615e-50 | -8.615850e-47 |
| Msa0268650 | Msa0727020 | 0.859894 | 3.015155e-63 | -8.615850e-47 |
| Msa0268650 | Msa0736330 | 0.819393 | 1.189116e-52 | -8.615850e-47 |
| Msa0268650 | Msa0736930 | 0.807171 | 5.757204e-50 | -8.615850e-47 |
| Msa0268650 | Msa0739570 | 0.808726 | 2.687815e-50 | -8.615850e-47 |
| Msa0268650 | Msa0766880 | 0.858881 | 6.073651e-63 | -8.615850e-47 |
| Msa0268650 | Msa0772210 | 0.835107 | 2.033840e-56 | -8.615850e-47 |
| Msa0268650 | Msa0778060 | 0.816212 | 6.212391e-52 | -8.615850e-47 |
| Msa0268650 | Msa0782330 | 0.817454 | 3.269493e-52 | -8.615850e-47 |
| Msa0268650 | Msa0796450 | 0.800224 | 1.593503e-48 | -8.615850e-47 |
| Msa0268650 | Msa0804930 | 0.830849 | 2.329123e-55 | -8.615850e-47 |
| Msa0268650 | Msa0821490 | 0.823450 | 1.376513e-53 | -8.615850e-47 |
| Msa0268650 | Msa0834160 | 0.802335 | 5.890662e-49 | -8.615850e-47 |
| Msa0268650 | Msa0851870 | 0.800002 | 1.767410e-48 | -8.615850e-47 |
| Msa0268650 | Msa0855490 | 0.840472 | 8.520622e-58 | -8.615850e-47 |
| Msa0268650 | Msa0860270 | 0.821730 | 3.456207e-53 | -8.615850e-47 |
| Msa0268650 | Msa0910650 | 0.813572 | 2.391555e-51 | -8.615850e-47 |
| Msa0268650 | Msa0924820 | 0.844793 | 6.066138e-59 | -8.615850e-47 |
| Msa0268650 | Msa0924860 | 0.841238 | 5.362961e-58 | -8.615850e-47 |
| Msa0268650 | Msa0924870 | 0.821914 | 3.133308e-53 | -8.615850e-47 |
| Msa0268650 | Msa0924890 | 0.848651 | 5.351416e-60 | -8.615850e-47 |
| Msa0268650 | Msa0925020 | 0.859979 | 2.841948e-63 | -8.615850e-47 |
| Msa0268650 | Msa0931090 | 0.923600 | 2.145350e-89 | -8.615850e-47 |
| Msa0268650 | Msa0931150 | 0.931071 | 6.487663e-94 | -8.615850e-47 |
| Msa0268650 | Msa0931200 | 0.836520 | 8.919508e-57 | -8.615850e-47 |
| Msa0268650 | Msa0931220 | 0.804977 | 1.667253e-49 | -8.615850e-47 |
| Msa0268650 | Msa0931280 | 0.923864 | 1.511856e-89 | -8.615850e-47 |
| Msa0268650 | Msa0959970 | 0.806394 | 8.402889e-50 | -8.615850e-47 |
| Msa0268650 | Msa0983670 | 0.859218 | 4.814540e-63 | -8.615850e-47 |
| Msa0268650 | Msa0983710 | 0.833672 | 4.663029e-56 | -8.615850e-47 |
| Msa0268650 | Msa0992570 | 0.828563 | 8.387565e-55 | -8.615850e-47 |
| Msa0268650 | Msa0992590 | 0.820760 | 5.783917e-53 | -8.615850e-47 |
| Msa0268650 | Msa1002040 | 0.813621 | 2.333408e-51 | -8.615850e-47 |
| Msa0268650 | Msa1024580 | 0.818216 | 2.200774e-52 | -8.615850e-47 |
| Msa0268650 | Msa1030280 | 0.834092 | 3.661139e-56 | -8.615850e-47 |
| Msa0268650 | Msa1040770 | 0.809755 | 1.617472e-50 | -8.615850e-47 |
| Msa0268650 | Msa1049440 | 0.817435 | 3.303438e-52 | -8.615850e-47 |
| Msa0268650 | Msa1063180 | 0.805607 | 1.230447e-49 | -8.615850e-47 |
| Msa0268650 | Msa1070900 | 0.822497 | 2.295110e-53 | -8.615850e-47 |
| Msa0268650 | Msa1079610 | 0.812335 | 4.464566e-51 | -8.615850e-47 |
| Msa0268650 | Msa1086020 | 0.881665 | 1.987974e-70 | -8.615850e-47 |
| Msa0268650 | Msa1086060 | 0.883498 | 4.265083e-71 | -8.615850e-47 |
| Msa0268650 | Msa1086080 | 0.810837 | 9.448133e-51 | -8.615850e-47 |
| Msa0268650 | Msa1086100 | 0.802490 | 5.474029e-49 | -8.615850e-47 |
| Msa0268650 | Msa1086160 | 0.915999 | 3.014253e-85 | -8.615850e-47 |
| Msa0268650 | Msa1086170 | 0.908623 | 1.396749e-81 | -8.615850e-47 |
| Msa0268650 | Msa1086260 | 0.852249 | 5.224443e-61 | -8.615850e-47 |
| Msa0268650 | Msa1086290 | 0.921423 | 3.644689e-88 | -8.615850e-47 |
| Msa0268650 | Msa1086330 | 0.853971 | 1.679309e-61 | -8.615850e-47 |
| Msa0268650 | Msa1086340 | 0.853441 | 2.385222e-61 | -8.615850e-47 |
| Msa0268650 | Msa1086370 | 0.897986 | 8.252791e-77 | -8.615850e-47 |
| Msa0268650 | Msa1086410 | 0.826292 | 2.939265e-54 | -8.615850e-47 |
| Msa0268650 | Msa1086440 | 0.900725 | 5.492935e-78 | -8.615850e-47 |
| Msa0268650 | Msa1086480 | 0.909056 | 8.682229e-82 | -8.615850e-47 |
| Msa0268650 | Msa1086520 | 0.855844 | 4.801810e-62 | -8.615850e-47 |
| Msa0268650 | Msa1086630 | 0.871928 | 4.701764e-67 | -8.615850e-47 |
| Msa0268650 | Msa1086690 | 0.864971 | 8.279601e-65 | -8.615850e-47 |
| Msa0268650 | Msa1086830 | 0.875060 | 4.148368e-68 | -8.615850e-47 |
| Msa0268650 | Msa1086870 | 0.881641 | 2.028061e-70 | -8.615850e-47 |
| Msa0268650 | Msa1087000 | 0.822662 | 2.101049e-53 | -8.615850e-47 |
| Msa0268650 | Msa1090230 | 0.832814 | 7.623983e-56 | -8.615850e-47 |
| Msa0268650 | Msa1091690 | 0.886311 | 3.820176e-72 | -8.615850e-47 |
| Msa0268650 | Msa1123340 | 0.812354 | 4.422364e-51 | -8.615850e-47 |
| Msa0268650 | Msa1124440 | 0.820094 | 8.224671e-53 | -8.615850e-47 |
| Msa0268650 | Msa1126910 | 0.808288 | 3.333800e-50 | -8.615850e-47 |
| Msa0268650 | Msa1128350 | 0.800617 | 1.325365e-48 | -8.615850e-47 |
| Msa0268650 | Msa1130700 | 0.816039 | 6.791498e-52 | -8.615850e-47 |
| Msa0268650 | Msa1132540 | 0.800134 | 1.662139e-48 | -8.615850e-47 |
| Msa0268650 | Msa1143140 | 0.873116 | 1.885968e-67 | -8.615850e-47 |
| Msa0268650 | Msa1143150 | 0.837336 | 5.521050e-57 | -8.615850e-47 |
| Msa0268650 | Msa1143160 | 0.809180 | 2.149436e-50 | -8.615850e-47 |
| Msa0268650 | Msa1157160 | 0.827755 | 1.312761e-54 | -8.615850e-47 |
| Msa0268650 | Msa1166180 | 0.802308 | 5.967531e-49 | -8.615850e-47 |
| Msa0268650 | Msa1166280 | 0.801679 | 8.035425e-49 | -8.615850e-47 |
| Msa0268650 | Msa1168130 | 0.807238 | 5.573261e-50 | -8.615850e-47 |
| Msa0268650 | Msa1173410 | 0.811056 | 8.471100e-51 | -8.615850e-47 |
| Msa0268650 | Msa1190320 | 0.800330 | 1.515759e-48 | -8.615850e-47 |
| Msa0268650 | Msa1195860 | 0.821667 | 3.574170e-53 | -8.615850e-47 |
| Msa0268650 | Msa1198420 | 0.809376 | 1.950733e-50 | -8.615850e-47 |
| Msa0268650 | Msa1199210 | 0.802322 | 5.927621e-49 | -8.615850e-47 |
| Msa0268650 | Msa1199690 | 0.811172 | 7.994189e-51 | -8.615850e-47 |
| Msa0268650 | Msa1209390 | 0.831496 | 1.615701e-55 | -8.615850e-47 |
| Msa0268650 | Msa1209650 | 0.816885 | 4.390109e-52 | -8.615850e-47 |
| Msa0268650 | Msa1220740 | 0.816217 | 6.195226e-52 | -8.615850e-47 |
| Msa0268650 | Msa1248400 | 0.814448 | 1.532807e-51 | -8.615850e-47 |
| Msa0268650 | Msa1252040 | 0.808914 | 2.451015e-50 | -8.615850e-47 |
| Msa0268650 | Msa1264230 | 0.800113 | 1.678640e-48 | -8.615850e-47 |
| Msa0268650 | Msa1267800 | 0.801248 | 9.849477e-49 | -8.615850e-47 |
| Msa0268650 | Msa1284030 | 0.811165 | 8.022388e-51 | -8.615850e-47 |
| Msa0268650 | Msa1298740 | 0.836792 | 7.601236e-57 | -8.615850e-47 |
| Msa0268650 | Msa1302920 | 0.815526 | 8.835190e-52 | -8.615850e-47 |
| Msa0268650 | Msa1309910 | 0.825312 | 5.019919e-54 | -8.615850e-47 |
| Msa0268650 | Msa1327820 | 0.820271 | 7.489902e-53 | -8.615850e-47 |
| Msa0268650 | Msa1331900 | 0.810689 | 1.017539e-50 | -8.615850e-47 |
| Msa0268650 | Msa1334650 | 0.814523 | 1.475006e-51 | -8.615850e-47 |
| Msa0268650 | Msa1339250 | 0.807376 | 5.211208e-50 | -8.615850e-47 |
| Msa0268650 | Msa1342030 | 0.813875 | 2.050597e-51 | -8.615850e-47 |
| Msa0268650 | Msa1351560 | 0.812546 | 4.015025e-51 | -8.615850e-47 |
| Msa0268650 | Msa1352820 | 0.803206 | 3.893247e-49 | -8.615850e-47 |
| Msa0268650 | Msa1354850 | 0.884611 | 1.654097e-71 | -8.615850e-47 |
| Msa0268650 | Msa1354890 | 0.899956 | 1.185470e-77 | -8.615850e-47 |
| Msa0268650 | Msa1354910 | 0.808245 | 3.404481e-50 | -8.615850e-47 |
| Msa0268650 | Msa1354930 | 0.812101 | 5.021684e-51 | -8.615850e-47 |
| Msa0268650 | Msa1355020 | 0.870451 | 1.444612e-66 | -8.615850e-47 |
| Msa0268650 | Msa1355060 | 0.882268 | 1.201486e-70 | -8.615850e-47 |
| Msa0268650 | Msa1355100 | 0.809482 | 1.851846e-50 | -8.615850e-47 |
| Msa0268650 | Msa1365210 | 0.822270 | 2.590827e-53 | -8.615850e-47 |
| Msa0268650 | Msa1367810 | 0.802437 | 5.611614e-49 | -8.615850e-47 |
| Msa0268650 | Msa1367940 | 0.800145 | 1.653421e-48 | -8.615850e-47 |
| Msa0268650 | Msa1371250 | 0.815587 | 8.563034e-52 | -8.615850e-47 |
| Msa0268650 | Msa1380540 | 0.870119 | 1.855580e-66 | -8.615850e-47 |
| Msa0268650 | Msa1380580 | 0.814611 | 1.410995e-51 | -8.615850e-47 |
| Msa0268650 | Msa1380600 | 0.817658 | 2.941321e-52 | -8.615850e-47 |
| Msa0268650 | Msa1385940 | 0.827601 | 1.429343e-54 | -8.615850e-47 |
| Msa0268650 | Msa1387090 | 0.815145 | 1.074128e-51 | -8.615850e-47 |
| Msa0268650 | Msa1394050 | 0.800098 | 1.690428e-48 | -8.615850e-47 |
| Msa0268650 | Msa1394090 | 0.872455 | 3.137994e-67 | -8.615850e-47 |
| Msa0268650 | Msa1394100 | 0.856670 | 2.750004e-62 | -8.615850e-47 |
| Msa0268650 | Msa1394140 | 0.861858 | 7.632858e-64 | -8.615850e-47 |
| Msa0268650 | Msa1394170 | 0.826811 | 2.209846e-54 | -8.615850e-47 |
| Msa0268650 | Msa1394240 | 0.892772 | 1.166101e-74 | -8.615850e-47 |
| Msa0268650 | Msa1394280 | 0.868915 | 4.576074e-66 | -8.615850e-47 |
| Msa0268650 | Msa1406230 | 0.816188 | 6.288649e-52 | -8.615850e-47 |
| Msa0268650 | Msa1415120 | 0.839176 | 1.853341e-57 | -8.615850e-47 |
| Msa0268650 | Msa1426870 | 0.837716 | 4.411023e-57 | -8.615850e-47 |
| Msa0268650 | Msa1427020 | 0.805745 | 1.151011e-49 | -8.615850e-47 |
| Msa0268650 | Msa1428990 | 0.805237 | 1.471084e-49 | -8.615850e-47 |
| Msa0268650 | Msa1430940 | 0.806203 | 9.221578e-50 | -8.615850e-47 |
| Msa0268650 | Msa1435470 | 0.811581 | 6.518065e-51 | -8.615850e-47 |
| Msa0268650 | Msa1439800 | 0.811568 | 6.560251e-51 | -8.615850e-47 |
| Msa0268650 | Msa1458920 | 0.804129 | 2.504689e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268650 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa0268650 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa0268650 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268650 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
| Msa0268650 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 2_2:-70349601 | Msa0268650:CDS |
| ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 2_2:+70349498 | None:intergenic |
| AATGATCCAGGACGTAATCC+TGG | 0.474800 | 2_2:-70348954 | Msa0268650:CDS |
| GGATTCCTATCTAATGATCC+AGG | 0.536202 | 2_2:-70348966 | Msa0268650:CDS |
| TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 2_2:+70348948 | None:intergenic |
| TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 2_2:+70348961 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCAAAAAAAAAAAACTT+AGG | + | chr2_2:70349384-70349403 | None:intergenic | 10.0% |
| !!! | AATTTTAATATTTGGAATCA+AGG | + | chr2_2:70349228-70349247 | None:intergenic | 15.0% |
| !!! | GATTCCAAATATTAAAATTT+TGG | - | chr2_2:70349229-70349248 | Msa0268650:intron | 15.0% |
| !!! | CTATCCAAAATTTTAATATT+TGG | + | chr2_2:70349236-70349255 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTAATTATCT+TGG | - | chr2_2:70349479-70349498 | Msa0268650:CDS | 15.0% |
| !! | GAAAAAACTACTTGAATAAA+GGG | + | chr2_2:70348987-70349006 | None:intergenic | 20.0% |
| !! | AGAAAAAACTACTTGAATAA+AGG | + | chr2_2:70348988-70349007 | None:intergenic | 20.0% |
| !!! | TTATTCAAGTAGTTTTTTCT+TGG | - | chr2_2:70348988-70349007 | Msa0268650:CDS | 20.0% |
| !! | TGAAAATTCTATTATTCGAT+TGG | - | chr2_2:70349272-70349291 | Msa0268650:intron | 20.0% |
| !! | TTGTGGATATGAAAAAAATT+TGG | - | chr2_2:70349322-70349341 | Msa0268650:intron | 20.0% |
| !! | TCTTATAAACTTAGTATCAA+AGG | - | chr2_2:70349413-70349432 | Msa0268650:intron | 20.0% |
| !!! | TTTTTCTCTTAGCTTTTGTT+TGG | - | chr2_2:70349080-70349099 | Msa0268650:intron | 25.0% |
| !!! | TTTGTTTCTCTTTTCATCTT+CGG | - | chr2_2:70349554-70349573 | Msa0268650:CDS | 25.0% |
| ! | AATTGGATTCAAAAAAGCGT+AGG | + | chr2_2:70349029-70349048 | None:intergenic | 30.0% |
| ACTGGCATAAAATCTACAAT+TGG | + | chr2_2:70349046-70349065 | None:intergenic | 30.0% | |
| !! | AAAAAGAGTAAGGGTATTAC+TGG | + | chr2_2:70349064-70349083 | None:intergenic | 30.0% |
| GCTAAGAGAAAAAAGAGTAA+GGG | + | chr2_2:70349073-70349092 | None:intergenic | 30.0% | |
| AGCTAAGAGAAAAAAGAGTA+AGG | + | chr2_2:70349074-70349093 | None:intergenic | 30.0% | |
| !! | AATCAAGATCTAGGTATTGG+TGG | + | chr2_2:70349304-70349323 | None:intergenic | 35.0% |
| CACAATCAAGATCTAGGTAT+TGG | + | chr2_2:70349307-70349326 | None:intergenic | 35.0% | |
| CAATACCTAGATCTTGATTG+TGG | - | chr2_2:70349305-70349324 | Msa0268650:intron | 35.0% | |
| CATATCCACAATCAAGATCT+AGG | + | chr2_2:70349313-70349332 | None:intergenic | 35.0% | |
| GAGAATCTATTCTCTTTCTC+TGG | - | chr2_2:70349456-70349475 | Msa0268650:CDS | 35.0% | |
| ! | TTCAAAAAAGCGTAGGCTTC+AGG | + | chr2_2:70349022-70349041 | None:intergenic | 40.0% |
| GGATTCCTATCTAATGATCC+AGG | - | chr2_2:70349575-70349594 | Msa0268650:CDS | 40.0% | |
| TACGTCCTGGATCATTAGAT+AGG | + | chr2_2:70349583-70349602 | None:intergenic | 40.0% | |
| !! | CAAGATCTAGGTATTGGTGG+TGG | + | chr2_2:70349301-70349320 | None:intergenic | 45.0% |
| AATGATCCAGGACGTAATCC+TGG | - | chr2_2:70349587-70349606 | Msa0268650:CDS | 45.0% | |
| !!! | AATAAATTCTTAATTTTTTT+CGG | + | chr2_2:70349151-70349170 | None:intergenic | 5.0% |
| TCACGTCCAGGATTACGTCC+TGG | + | chr2_2:70349596-70349615 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70348941 | 70349622 | 70348941 | ID=Msa0268650;Name=Msa0268650 |
| chr2_2 | mRNA | 70348941 | 70349622 | 70348941 | ID=Msa0268650-mRNA-1;Parent=Msa0268650;Name=Msa0268650-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
| chr2_2 | exon | 70349448 | 70349622 | 70349448 | ID=Msa0268650-mRNA-1:exon:22609;Parent=Msa0268650-mRNA-1 |
| chr2_2 | exon | 70348941 | 70349059 | 70348941 | ID=Msa0268650-mRNA-1:exon:22608;Parent=Msa0268650-mRNA-1 |
| chr2_2 | CDS | 70349448 | 70349622 | 70349448 | ID=Msa0268650-mRNA-1:cds;Parent=Msa0268650-mRNA-1 |
| chr2_2 | CDS | 70348941 | 70349059 | 70348941 | ID=Msa0268650-mRNA-1:cds;Parent=Msa0268650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
