Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086440 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086440 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086440 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007160 | Msa1086440 | 0.805251 | 1.460624e-49 | -8.615850e-47 |
| Msa0017120 | Msa1086440 | 0.802670 | 5.026111e-49 | -8.615850e-47 |
| Msa0032040 | Msa1086440 | 0.821716 | 3.482102e-53 | -8.615850e-47 |
| Msa0035090 | Msa1086440 | 0.841010 | 6.158262e-58 | -8.615850e-47 |
| Msa0039200 | Msa1086440 | 0.842253 | 2.895498e-58 | -8.615850e-47 |
| Msa0040190 | Msa1086440 | 0.825930 | 3.583443e-54 | -8.615850e-47 |
| Msa0083570 | Msa1086440 | 0.813997 | 1.927701e-51 | -8.615850e-47 |
| Msa0086820 | Msa1086440 | 0.845746 | 3.350572e-59 | -8.615850e-47 |
| Msa0087880 | Msa1086440 | 0.817438 | 3.297107e-52 | -8.615850e-47 |
| Msa0092750 | Msa1086440 | 0.828239 | 1.004013e-54 | -8.615850e-47 |
| Msa0095140 | Msa1086440 | 0.865516 | 5.579842e-65 | -8.615850e-47 |
| Msa0095180 | Msa1086440 | 0.802650 | 5.073761e-49 | -8.615850e-47 |
| Msa0095200 | Msa1086440 | 0.849464 | 3.179458e-60 | -8.615850e-47 |
| Msa0095240 | Msa1086440 | 0.860379 | 2.152222e-63 | -8.615850e-47 |
| Msa0095270 | Msa1086440 | 0.867363 | 1.446748e-65 | -8.615850e-47 |
| Msa0103060 | Msa1086440 | 0.810162 | 1.321959e-50 | -8.615850e-47 |
| Msa0606060 | Msa1086440 | 0.805318 | 1.414540e-49 | -8.615850e-47 |
| Msa0606140 | Msa1086440 | 0.821829 | 3.278143e-53 | -8.615850e-47 |
| Msa0606680 | Msa1086440 | 0.803033 | 4.229005e-49 | -8.615850e-47 |
| Msa0619060 | Msa1086440 | 0.824785 | 6.688041e-54 | -8.615850e-47 |
| Msa0622390 | Msa1086440 | 0.806647 | 7.430804e-50 | -8.615850e-47 |
| Msa0624240 | Msa1086440 | 0.803563 | 3.283856e-49 | -8.615850e-47 |
| Msa0626890 | Msa1086440 | 0.832417 | 9.567196e-56 | -8.615850e-47 |
| Msa0635990 | Msa1086440 | 0.830116 | 3.518866e-55 | -8.615850e-47 |
| Msa0638040 | Msa1086440 | 0.806910 | 6.538539e-50 | -8.615850e-47 |
| Msa0647110 | Msa1086440 | 0.820566 | 6.411807e-53 | -8.615850e-47 |
| Msa0653710 | Msa1086440 | 0.803379 | 3.585664e-49 | -8.615850e-47 |
| Msa0654060 | Msa1086440 | 0.803789 | 2.947478e-49 | -8.615850e-47 |
| Msa0659640 | Msa1086440 | 0.828514 | 8.618480e-55 | -8.615850e-47 |
| Msa0665010 | Msa1086440 | 0.806622 | 7.522520e-50 | -8.615850e-47 |
| Msa0668630 | Msa1086440 | 0.838349 | 3.031824e-57 | -8.615850e-47 |
| Msa0677110 | Msa1086440 | 0.803684 | 3.100290e-49 | -8.615850e-47 |
| Msa0686610 | Msa1086440 | 0.805086 | 1.581825e-49 | -8.615850e-47 |
| Msa0698880 | Msa1086440 | 0.801816 | 7.531658e-49 | -8.615850e-47 |
| Msa0702070 | Msa1086440 | 0.802888 | 4.531069e-49 | -8.615850e-47 |
| Msa0704570 | Msa1086440 | 0.814259 | 1.687386e-51 | -8.615850e-47 |
| Msa0704750 | Msa1086440 | 0.821726 | 3.463337e-53 | -8.615850e-47 |
| Msa0705610 | Msa1086440 | 0.806229 | 9.101853e-50 | -8.615850e-47 |
| Msa0706710 | Msa1086440 | 0.806597 | 7.615841e-50 | -8.615850e-47 |
| Msa0716670 | Msa1086440 | 0.805725 | 1.161887e-49 | -8.615850e-47 |
| Msa0727020 | Msa1086440 | 0.831273 | 1.833115e-55 | -8.615850e-47 |
| Msa0736330 | Msa1086440 | 0.838791 | 2.330512e-57 | -8.615850e-47 |
| Msa0736930 | Msa1086440 | 0.805861 | 1.088033e-49 | -8.615850e-47 |
| Msa0739570 | Msa1086440 | 0.812271 | 4.611569e-51 | -8.615850e-47 |
| Msa0766880 | Msa1086440 | 0.866821 | 2.154608e-65 | -8.615850e-47 |
| Msa0772210 | Msa1086440 | 0.835113 | 2.026465e-56 | -8.615850e-47 |
| Msa0778060 | Msa1086440 | 0.836900 | 7.134445e-57 | -8.615850e-47 |
| Msa0782330 | Msa1086440 | 0.825776 | 3.898888e-54 | -8.615850e-47 |
| Msa0796450 | Msa1086440 | 0.804365 | 2.236910e-49 | -8.615850e-47 |
| Msa0804930 | Msa1086440 | 0.842004 | 3.369914e-58 | -8.615850e-47 |
| Msa0821490 | Msa1086440 | 0.823688 | 1.210760e-53 | -8.615850e-47 |
| Msa0834160 | Msa1086440 | 0.807273 | 5.479529e-50 | -8.615850e-47 |
| Msa0124070 | Msa1086440 | 0.806014 | 1.010149e-49 | -8.615850e-47 |
| Msa0130120 | Msa1086440 | 0.826864 | 2.146363e-54 | -8.615850e-47 |
| Msa0133670 | Msa1086440 | 0.841681 | 4.101182e-58 | -8.615850e-47 |
| Msa0133880 | Msa1086440 | 0.847513 | 1.103004e-59 | -8.615850e-47 |
| Msa0134550 | Msa1086440 | 0.824070 | 9.848508e-54 | -8.615850e-47 |
| Msa0139740 | Msa1086440 | 0.836604 | 8.492146e-57 | -8.615850e-47 |
| Msa0156780 | Msa1086440 | 0.837268 | 5.746847e-57 | -8.615850e-47 |
| Msa0175900 | Msa1086440 | 0.835592 | 1.534494e-56 | -8.615850e-47 |
| Msa0180980 | Msa1086440 | 0.814650 | 1.383055e-51 | -8.615850e-47 |
| Msa0181290 | Msa1086440 | 0.810524 | 1.104642e-50 | -8.615850e-47 |
| Msa0184120 | Msa1086440 | 0.845913 | 3.017842e-59 | -8.615850e-47 |
| Msa0186750 | Msa1086440 | 0.810430 | 1.157188e-50 | -8.615850e-47 |
| Msa0189050 | Msa1086440 | 0.811323 | 7.416691e-51 | -8.615850e-47 |
| Msa0190000 | Msa1086440 | 0.801400 | 9.165379e-49 | -8.615850e-47 |
| Msa0202630 | Msa1086440 | 0.813385 | 2.629504e-51 | -8.615850e-47 |
| Msa0207530 | Msa1086440 | 0.822251 | 2.617299e-53 | -8.615850e-47 |
| Msa0207900 | Msa1086440 | 0.802690 | 4.976975e-49 | -8.615850e-47 |
| Msa0216010 | Msa1086440 | 0.806239 | 9.058956e-50 | -8.615850e-47 |
| Msa0221860 | Msa1086440 | 0.850006 | 2.244652e-60 | -8.615850e-47 |
| Msa0222070 | Msa1086440 | 0.825666 | 4.138943e-54 | -8.615850e-47 |
| Msa0222120 | Msa1086440 | 0.824865 | 6.401629e-54 | -8.615850e-47 |
| Msa0224960 | Msa1086440 | 0.818742 | 1.672396e-52 | -8.615850e-47 |
| Msa0225010 | Msa1086440 | 0.813222 | 2.854659e-51 | -8.615850e-47 |
| Msa0227290 | Msa1086440 | 0.834797 | 2.435517e-56 | -8.615850e-47 |
| Msa0231310 | Msa1086440 | 0.809217 | 2.110437e-50 | -8.615850e-47 |
| Msa0365150 | Msa1086440 | 0.815112 | 1.092268e-51 | -8.615850e-47 |
| Msa0370510 | Msa1086440 | 0.813910 | 2.015394e-51 | -8.615850e-47 |
| Msa0377460 | Msa1086440 | 0.814440 | 1.539162e-51 | -8.615850e-47 |
| Msa0380420 | Msa1086440 | 0.804122 | 2.513428e-49 | -8.615850e-47 |
| Msa0386390 | Msa1086440 | 0.802894 | 4.518441e-49 | -8.615850e-47 |
| Msa0390950 | Msa1086440 | 0.803901 | 2.793528e-49 | -8.615850e-47 |
| Msa0392450 | Msa1086440 | 0.812661 | 3.788897e-51 | -8.615850e-47 |
| Msa0417150 | Msa1086440 | 0.801905 | 7.221114e-49 | -8.615850e-47 |
| Msa0417630 | Msa1086440 | 0.807444 | 5.040709e-50 | -8.615850e-47 |
| Msa0426860 | Msa1086440 | 0.844304 | 8.214566e-59 | -8.615850e-47 |
| Msa0426890 | Msa1086440 | 0.831380 | 1.725308e-55 | -8.615850e-47 |
| Msa0427050 | Msa1086440 | 0.847355 | 1.218628e-59 | -8.615850e-47 |
| Msa0434630 | Msa1086440 | 0.800168 | 1.635997e-48 | -8.615850e-47 |
| Msa0449900 | Msa1086440 | 0.823767 | 1.159767e-53 | -8.615850e-47 |
| Msa0449930 | Msa1086440 | 0.828578 | 8.314983e-55 | -8.615850e-47 |
| Msa0456480 | Msa1086440 | 0.803227 | 3.854979e-49 | -8.615850e-47 |
| Msa0464500 | Msa1086440 | 0.828084 | 1.094188e-54 | -8.615850e-47 |
| Msa0466100 | Msa1086440 | 0.806825 | 6.814777e-50 | -8.615850e-47 |
| Msa0473450 | Msa1086440 | 0.813062 | 3.094701e-51 | -8.615850e-47 |
| Msa0475830 | Msa1086440 | 0.815885 | 7.351541e-52 | -8.615850e-47 |
| Msa0479790 | Msa1086440 | 0.804335 | 2.269433e-49 | -8.615850e-47 |
| Msa0482020 | Msa1086440 | 0.826863 | 2.147554e-54 | -8.615850e-47 |
| Msa0981300 | Msa1086440 | 0.802647 | 5.079989e-49 | -8.615850e-47 |
| Msa0983670 | Msa1086440 | 0.845415 | 4.118858e-59 | -8.615850e-47 |
| Msa0983710 | Msa1086440 | 0.800437 | 1.442170e-48 | -8.615850e-47 |
| Msa0992570 | Msa1086440 | 0.810086 | 1.372726e-50 | -8.615850e-47 |
| Msa0992590 | Msa1086440 | 0.801961 | 7.033117e-49 | -8.615850e-47 |
| Msa1024580 | Msa1086440 | 0.839916 | 1.189669e-57 | -8.615850e-47 |
| Msa1030280 | Msa1086440 | 0.834173 | 3.493091e-56 | -8.615850e-47 |
| Msa1033160 | Msa1086440 | 0.804264 | 2.348020e-49 | -8.615850e-47 |
| Msa1049440 | Msa1086440 | 0.833901 | 4.085834e-56 | -8.615850e-47 |
| Msa1063180 | Msa1086440 | 0.826485 | 2.643656e-54 | -8.615850e-47 |
| Msa1070900 | Msa1086440 | 0.808082 | 3.689183e-50 | -8.615850e-47 |
| Msa1070930 | Msa1086440 | 0.806772 | 6.993193e-50 | -8.615850e-47 |
| Msa1073140 | Msa1086440 | 0.801284 | 9.683744e-49 | -8.615850e-47 |
| Msa1079610 | Msa1086440 | 0.814003 | 1.922084e-51 | -8.615850e-47 |
| Msa1086020 | Msa1086440 | 0.850859 | 1.292838e-60 | -8.615850e-47 |
| Msa1086060 | Msa1086440 | 0.883775 | 3.371223e-71 | -8.615850e-47 |
| Msa1086160 | Msa1086440 | 0.917567 | 4.535889e-86 | -8.615850e-47 |
| Msa1086170 | Msa1086440 | 0.881317 | 2.653826e-70 | -8.615850e-47 |
| Msa1086260 | Msa1086440 | 0.846953 | 1.570435e-59 | -8.615850e-47 |
| Msa1086290 | Msa1086440 | 0.870022 | 1.997620e-66 | -8.615850e-47 |
| Msa1086330 | Msa1086440 | 0.842163 | 3.058468e-58 | -8.615850e-47 |
| Msa1086340 | Msa1086440 | 0.819197 | 1.317795e-52 | -8.615850e-47 |
| Msa1086370 | Msa1086440 | 0.866829 | 2.140804e-65 | -8.615850e-47 |
| Msa1086410 | Msa1086440 | 0.816264 | 6.048907e-52 | -8.615850e-47 |
| Msa1086440 | Msa1086480 | 0.847515 | 1.101512e-59 | -8.615850e-47 |
| Msa1086440 | Msa1086520 | 0.841659 | 4.154281e-58 | -8.615850e-47 |
| Msa1086440 | Msa1086630 | 0.848530 | 5.779474e-60 | -8.615850e-47 |
| Msa1086440 | Msa1086690 | 0.858343 | 8.791460e-63 | -8.615850e-47 |
| Msa1086440 | Msa1086830 | 0.852596 | 4.160195e-61 | -8.615850e-47 |
| Msa1086440 | Msa1086870 | 0.899102 | 2.762071e-77 | -8.615850e-47 |
| Msa1086440 | Msa1087000 | 0.822081 | 2.866092e-53 | -8.615850e-47 |
| Msa1086440 | Msa1090230 | 0.821936 | 3.097212e-53 | -8.615850e-47 |
| Msa1086440 | Msa1091690 | 0.861524 | 9.657729e-64 | -8.615850e-47 |
| Msa1086440 | Msa1108530 | 0.807562 | 4.757943e-50 | -8.615850e-47 |
| Msa1086440 | Msa1120540 | 0.807367 | 5.233979e-50 | -8.615850e-47 |
| Msa1086440 | Msa1123340 | 0.829907 | 3.957142e-55 | -8.615850e-47 |
| Msa1086440 | Msa1124440 | 0.814233 | 1.710048e-51 | -8.615850e-47 |
| Msa1086440 | Msa1126910 | 0.818010 | 2.449985e-52 | -8.615850e-47 |
| Msa1086440 | Msa1132540 | 0.817190 | 3.749420e-52 | -8.615850e-47 |
| Msa1086440 | Msa1143140 | 0.836946 | 6.944643e-57 | -8.615850e-47 |
| Msa1086440 | Msa1143150 | 0.837659 | 4.561832e-57 | -8.615850e-47 |
| Msa1086440 | Msa1157160 | 0.834447 | 2.981340e-56 | -8.615850e-47 |
| Msa1086440 | Msa1161120 | 0.803036 | 4.221351e-49 | -8.615850e-47 |
| Msa1086440 | Msa1161160 | 0.811386 | 7.185604e-51 | -8.615850e-47 |
| Msa1086440 | Msa1166180 | 0.806609 | 7.569038e-50 | -8.615850e-47 |
| Msa1086440 | Msa1166280 | 0.809124 | 2.209085e-50 | -8.615850e-47 |
| Msa1086440 | Msa1173410 | 0.816207 | 6.229893e-52 | -8.615850e-47 |
| Msa1086440 | Msa1178970 | 0.803638 | 3.169103e-49 | -8.615850e-47 |
| Msa1086440 | Msa1195860 | 0.810660 | 1.032288e-50 | -8.615850e-47 |
| Msa1086440 | Msa1198420 | 0.805631 | 1.216222e-49 | -8.615850e-47 |
| Msa1086440 | Msa1199690 | 0.818173 | 2.250105e-52 | -8.615850e-47 |
| Msa1086440 | Msa1209390 | 0.829410 | 5.228765e-55 | -8.615850e-47 |
| Msa1086440 | Msa1209650 | 0.826892 | 2.113662e-54 | -8.615850e-47 |
| Msa1086440 | Msa1213540 | 0.801308 | 9.574370e-49 | -8.615850e-47 |
| Msa1086440 | Msa1220740 | 0.803314 | 3.698048e-49 | -8.615850e-47 |
| Msa1086440 | Msa1246420 | 0.804727 | 1.879842e-49 | -8.615850e-47 |
| Msa1086440 | Msa1248400 | 0.805761 | 1.142088e-49 | -8.615850e-47 |
| Msa1086440 | Msa1252040 | 0.824883 | 6.342066e-54 | -8.615850e-47 |
| Msa1086440 | Msa1298740 | 0.846913 | 1.611154e-59 | -8.615850e-47 |
| Msa1086440 | Msa1302920 | 0.816204 | 6.239746e-52 | -8.615850e-47 |
| Msa1086440 | Msa1309910 | 0.801476 | 8.842130e-49 | -8.615850e-47 |
| Msa1086440 | Msa1325650 | 0.802400 | 5.712797e-49 | -8.615850e-47 |
| Msa1086440 | Msa1327820 | 0.825011 | 5.914852e-54 | -8.615850e-47 |
| Msa1086440 | Msa1343540 | 0.817482 | 3.223626e-52 | -8.615850e-47 |
| Msa1086440 | Msa1351560 | 0.809999 | 1.433675e-50 | -8.615850e-47 |
| Msa1086440 | Msa1352820 | 0.802123 | 6.513488e-49 | -8.615850e-47 |
| Msa1086440 | Msa1354850 | 0.858120 | 1.024743e-62 | -8.615850e-47 |
| Msa1086440 | Msa1354890 | 0.862248 | 5.796150e-64 | -8.615850e-47 |
| Msa1086440 | Msa1355020 | 0.864362 | 1.284579e-64 | -8.615850e-47 |
| Msa1086440 | Msa1355060 | 0.840300 | 9.447225e-58 | -8.615850e-47 |
| Msa1086440 | Msa1361090 | 0.807539 | 4.811905e-50 | -8.615850e-47 |
| Msa1086440 | Msa1365210 | 0.818408 | 1.991145e-52 | -8.615850e-47 |
| Msa1086440 | Msa1367810 | 0.804704 | 1.900956e-49 | -8.615850e-47 |
| Msa1086440 | Msa1371250 | 0.809299 | 2.026271e-50 | -8.615850e-47 |
| Msa1086440 | Msa1375630 | 0.807755 | 4.329868e-50 | -8.615850e-47 |
| Msa1086440 | Msa1376530 | 0.811017 | 8.640645e-51 | -8.615850e-47 |
| Msa1086440 | Msa1380540 | 0.851257 | 9.986700e-61 | -8.615850e-47 |
| Msa1086440 | Msa1380600 | 0.810064 | 1.387638e-50 | -8.615850e-47 |
| Msa1086440 | Msa1385940 | 0.830043 | 3.667880e-55 | -8.615850e-47 |
| Msa1086440 | Msa1387090 | 0.838203 | 3.306518e-57 | -8.615850e-47 |
| Msa1086440 | Msa1390410 | 0.808799 | 2.593698e-50 | -8.615850e-47 |
| Msa1086440 | Msa1394090 | 0.864548 | 1.123393e-64 | -8.615850e-47 |
| Msa1086440 | Msa1394100 | 0.864886 | 8.807437e-65 | -8.615850e-47 |
| Msa1086440 | Msa1394140 | 0.868383 | 6.801825e-66 | -8.615850e-47 |
| Msa1086440 | Msa1394170 | 0.838257 | 3.201192e-57 | -8.615850e-47 |
| Msa1086440 | Msa1394240 | 0.830953 | 2.196332e-55 | -8.615850e-47 |
| Msa1086440 | Msa1394280 | 0.856139 | 3.936919e-62 | -8.615850e-47 |
| Msa1086440 | Msa1406230 | 0.821102 | 4.824995e-53 | -8.615850e-47 |
| Msa1086440 | Msa1415120 | 0.854927 | 8.882880e-62 | -8.615850e-47 |
| Msa1086440 | Msa1426870 | 0.845000 | 5.334018e-59 | -8.615850e-47 |
| Msa1086440 | Msa1427020 | 0.801655 | 8.125756e-49 | -8.615850e-47 |
| Msa1086440 | Msa1428990 | 0.813200 | 2.887549e-51 | -8.615850e-47 |
| Msa1086440 | Msa1435470 | 0.804646 | 1.954866e-49 | -8.615850e-47 |
| Msa1086440 | Msa1439160 | 0.817104 | 3.921365e-52 | -8.615850e-47 |
| Msa1086440 | Msa1439800 | 0.814381 | 1.585905e-51 | -8.615850e-47 |
| Msa1086440 | Msa1458920 | 0.811787 | 5.879979e-51 | -8.615850e-47 |
| Msa1086440 | Msa1466170 | 0.806967 | 6.359684e-50 | -8.615850e-47 |
| Msa0253410 | Msa1086440 | 0.825819 | 3.806857e-54 | -8.615850e-47 |
| Msa0256170 | Msa1086440 | 0.813725 | 2.213765e-51 | -8.615850e-47 |
| Msa0257130 | Msa1086440 | 0.805730 | 1.159144e-49 | -8.615850e-47 |
| Msa0263620 | Msa1086440 | 0.825941 | 3.562287e-54 | -8.615850e-47 |
| Msa0268180 | Msa1086440 | 0.888639 | 4.941260e-73 | -8.615850e-47 |
| Msa0268220 | Msa1086440 | 0.844123 | 9.186521e-59 | -8.615850e-47 |
| Msa0268340 | Msa1086440 | 0.851180 | 1.049385e-60 | -8.615850e-47 |
| Msa0268380 | Msa1086440 | 0.894892 | 1.607385e-75 | -8.615850e-47 |
| Msa0268420 | Msa1086440 | 0.877479 | 6.081026e-69 | -8.615850e-47 |
| Msa0268460 | Msa1086440 | 0.863305 | 2.736217e-64 | -8.615850e-47 |
| Msa0268500 | Msa1086440 | 0.844395 | 7.765659e-59 | -8.615850e-47 |
| Msa0268540 | Msa1086440 | 0.872752 | 2.498331e-67 | -8.615850e-47 |
| Msa0268650 | Msa1086440 | 0.900725 | 5.492935e-78 | -8.615850e-47 |
| Msa0268680 | Msa1086440 | 0.816687 | 4.864570e-52 | -8.615850e-47 |
| Msa0268690 | Msa1086440 | 0.811447 | 6.970471e-51 | -8.615850e-47 |
| Msa0268730 | Msa1086440 | 0.884951 | 1.236477e-71 | -8.615850e-47 |
| Msa0268760 | Msa1086440 | 0.822914 | 1.835569e-53 | -8.615850e-47 |
| Msa0268850 | Msa1086440 | 0.853507 | 2.282539e-61 | -8.615850e-47 |
| Msa0268900 | Msa1086440 | 0.849300 | 3.533398e-60 | -8.615850e-47 |
| Msa0268930 | Msa1086440 | 0.859521 | 3.906572e-63 | -8.615850e-47 |
| Msa0269060 | Msa1086440 | 0.883657 | 3.728031e-71 | -8.615850e-47 |
| Msa0269100 | Msa1086440 | 0.858869 | 6.125915e-63 | -8.615850e-47 |
| Msa0278080 | Msa1086440 | 0.802633 | 5.114426e-49 | -8.615850e-47 |
| Msa0284260 | Msa1086440 | 0.810558 | 1.085970e-50 | -8.615850e-47 |
| Msa0295840 | Msa1086440 | 0.809604 | 1.743258e-50 | -8.615850e-47 |
| Msa0301460 | Msa1086440 | 0.811104 | 8.270441e-51 | -8.615850e-47 |
| Msa0301800 | Msa1086440 | 0.801418 | 9.088939e-49 | -8.615850e-47 |
| Msa0304870 | Msa1086440 | 0.808352 | 3.230766e-50 | -8.615850e-47 |
| Msa0306130 | Msa1086440 | 0.823856 | 1.105902e-53 | -8.615850e-47 |
| Msa0307490 | Msa1086440 | 0.818263 | 2.147939e-52 | -8.615850e-47 |
| Msa0309160 | Msa1086440 | 0.808690 | 2.736742e-50 | -8.615850e-47 |
| Msa0324060 | Msa1086440 | 0.817202 | 3.726093e-52 | -8.615850e-47 |
| Msa0338900 | Msa1086440 | 0.816338 | 5.823399e-52 | -8.615850e-47 |
| Msa0341260 | Msa1086440 | 0.809410 | 1.918787e-50 | -8.615850e-47 |
| Msa0344240 | Msa1086440 | 0.807208 | 5.655985e-50 | -8.615850e-47 |
| Msa0344250 | Msa1086440 | 0.844859 | 5.821719e-59 | -8.615850e-47 |
| Msa0487560 | Msa1086440 | 0.805951 | 1.041570e-49 | -8.615850e-47 |
| Msa0487620 | Msa1086440 | 0.800303 | 1.535335e-48 | -8.615850e-47 |
| Msa0514260 | Msa1086440 | 0.800519 | 1.387562e-48 | -8.615850e-47 |
| Msa0517400 | Msa1086440 | 0.811953 | 5.409996e-51 | -8.615850e-47 |
| Msa0545910 | Msa1086440 | 0.801130 | 1.041110e-48 | -8.615850e-47 |
| Msa0550720 | Msa1086440 | 0.800003 | 1.767033e-48 | -8.615850e-47 |
| Msa0558890 | Msa1086440 | 0.814255 | 1.690946e-51 | -8.615850e-47 |
| Msa0568490 | Msa1086440 | 0.817329 | 3.489148e-52 | -8.615850e-47 |
| Msa0577140 | Msa1086440 | 0.812702 | 3.711331e-51 | -8.615850e-47 |
| Msa0582530 | Msa1086440 | 0.831119 | 1.999726e-55 | -8.615850e-47 |
| Msa0582570 | Msa1086440 | 0.861920 | 7.306559e-64 | -8.615850e-47 |
| Msa0582580 | Msa1086440 | 0.865875 | 4.298967e-65 | -8.615850e-47 |
| Msa0582620 | Msa1086440 | 0.830363 | 3.063758e-55 | -8.615850e-47 |
| Msa0582710 | Msa1086440 | 0.873890 | 1.035338e-67 | -8.615850e-47 |
| Msa0582740 | Msa1086440 | 0.852622 | 4.091006e-61 | -8.615850e-47 |
| Msa0582830 | Msa1086440 | 0.854609 | 1.098077e-61 | -8.615850e-47 |
| Msa0582900 | Msa1086440 | 0.841694 | 4.069169e-58 | -8.615850e-47 |
| Msa0582930 | Msa1086440 | 0.810725 | 9.992843e-51 | -8.615850e-47 |
| Msa0587060 | Msa1086440 | 0.827056 | 1.931588e-54 | -8.615850e-47 |
| Msa0591370 | Msa1086440 | 0.850603 | 1.526165e-60 | -8.615850e-47 |
| Msa0595780 | Msa1086440 | 0.832713 | 8.077306e-56 | -8.615850e-47 |
| Msa0855490 | Msa1086440 | 0.844924 | 5.593232e-59 | -8.615850e-47 |
| Msa0860270 | Msa1086440 | 0.818397 | 2.002356e-52 | -8.615850e-47 |
| Msa0910650 | Msa1086440 | 0.811836 | 5.735471e-51 | -8.615850e-47 |
| Msa0924820 | Msa1086440 | 0.843599 | 1.268725e-58 | -8.615850e-47 |
| Msa0924860 | Msa1086440 | 0.826159 | 3.160602e-54 | -8.615850e-47 |
| Msa0924870 | Msa1086440 | 0.806712 | 7.200121e-50 | -8.615850e-47 |
| Msa0924890 | Msa1086440 | 0.815754 | 7.862771e-52 | -8.615850e-47 |
| Msa0924970 | Msa1086440 | 0.807770 | 4.297095e-50 | -8.615850e-47 |
| Msa0925020 | Msa1086440 | 0.841234 | 5.376646e-58 | -8.615850e-47 |
| Msa0931090 | Msa1086440 | 0.867044 | 1.829397e-65 | -8.615850e-47 |
| Msa0931150 | Msa1086440 | 0.852750 | 3.760530e-61 | -8.615850e-47 |
| Msa0931200 | Msa1086440 | 0.808664 | 2.770878e-50 | -8.615850e-47 |
| Msa0931280 | Msa1086440 | 0.834517 | 2.863463e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086440 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa1086440 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa1086440 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086440 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
| Msa1086440 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 7_2:+87402168 | None:intergenic |
| ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 7_2:-87402271 | None:intergenic |
| AATGATCCAGGACGTAATCC+TGG | 0.474800 | 7_2:+87402816 | Msa1086440:CDS |
| GGATTCCTATCTAATGATCC+AGG | 0.536202 | 7_2:+87402804 | Msa1086440:CDS |
| TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 7_2:-87402822 | None:intergenic |
| TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 7_2:-87402809 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCCAAATATTAAAATTTT+TGG | + | chr7_2:87402458-87402477 | Msa1086440:intron | 10.0% |
| !!! | TATCCAAAAATTTTAATATT+TGG | - | chr7_2:87402464-87402483 | None:intergenic | 10.0% |
| !! | ATTTCAAAAAAAAAAAACTT+AGG | - | chr7_2:87402613-87402632 | None:intergenic | 10.0% |
| !!! | AATTTTAATATTTGGAATCA+AGG | - | chr7_2:87402456-87402475 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTAATTATCT+TGG | + | chr7_2:87402708-87402727 | Msa1086440:intron | 15.0% |
| !! | GAAAAAACTACTTGAATAAA+GGG | - | chr7_2:87402215-87402234 | None:intergenic | 20.0% |
| !! | AGAAAAAACTACTTGAATAA+AGG | - | chr7_2:87402216-87402235 | None:intergenic | 20.0% |
| !!! | TTATTCAAGTAGTTTTTTCT+TGG | + | chr7_2:87402216-87402235 | Msa1086440:CDS | 20.0% |
| !! | ATGAAAATCTATTATTCGAT+TGG | + | chr7_2:87402501-87402520 | Msa1086440:intron | 20.0% |
| !!! | TTGTGGATATGAAAAAATTT+TGG | + | chr7_2:87402551-87402570 | Msa1086440:intron | 20.0% |
| !! | TCTTATAAACTTAGTATCAA+AGG | + | chr7_2:87402642-87402661 | Msa1086440:intron | 20.0% |
| !!! | TTTTTCTCTTAGCTTTTGTT+TGG | + | chr7_2:87402308-87402327 | Msa1086440:CDS | 25.0% |
| !!! | TTTGTTTCTCTTTTCATCTT+CGG | + | chr7_2:87402783-87402802 | Msa1086440:CDS | 25.0% |
| ! | AATTGGATTCAAAAAAGCGT+AGG | - | chr7_2:87402257-87402276 | None:intergenic | 30.0% |
| ACTGGCATAAAATCTACAAT+TGG | - | chr7_2:87402274-87402293 | None:intergenic | 30.0% | |
| !! | AAAAAGAGTAAGGGTATTAC+TGG | - | chr7_2:87402292-87402311 | None:intergenic | 30.0% |
| GCTAAGAGAAAAAAGAGTAA+GGG | - | chr7_2:87402301-87402320 | None:intergenic | 30.0% | |
| AGCTAAGAGAAAAAAGAGTA+AGG | - | chr7_2:87402302-87402321 | None:intergenic | 30.0% | |
| !! | AATCAAGATCTAGGTATTGG+TGG | - | chr7_2:87402533-87402552 | None:intergenic | 35.0% |
| CACAATCAAGATCTAGGTAT+TGG | - | chr7_2:87402536-87402555 | None:intergenic | 35.0% | |
| CAATACCTAGATCTTGATTG+TGG | + | chr7_2:87402534-87402553 | Msa1086440:intron | 35.0% | |
| CATATCCACAATCAAGATCT+AGG | - | chr7_2:87402542-87402561 | None:intergenic | 35.0% | |
| GAGAATCTATTCTCTTTCTC+TGG | + | chr7_2:87402685-87402704 | Msa1086440:intron | 35.0% | |
| ! | TTCAAAAAAGCGTAGGCTTC+AGG | - | chr7_2:87402250-87402269 | None:intergenic | 40.0% |
| GGATTCCTATCTAATGATCC+AGG | + | chr7_2:87402804-87402823 | Msa1086440:CDS | 40.0% | |
| TACGTCCTGGATCATTAGAT+AGG | - | chr7_2:87402812-87402831 | None:intergenic | 40.0% | |
| !! | CAAGATCTAGGTATTGGTGG+TGG | - | chr7_2:87402530-87402549 | None:intergenic | 45.0% |
| AATGATCCAGGACGTAATCC+TGG | + | chr7_2:87402816-87402835 | Msa1086440:CDS | 45.0% | |
| !!! | AATAAATTCTTAATTTTTTT+CGG | - | chr7_2:87402379-87402398 | None:intergenic | 5.0% |
| TCACGTCCAGGATTACGTCC+TGG | - | chr7_2:87402825-87402844 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87402169 | 87402851 | 87402169 | ID=Msa1086440;Name=Msa1086440 |
| chr7_2 | mRNA | 87402169 | 87402851 | 87402169 | ID=Msa1086440-mRNA-1;Parent=Msa1086440;Name=Msa1086440-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0|0|2|0|97 |
| chr7_2 | exon | 87402169 | 87402343 | 87402169 | ID=Msa1086440-mRNA-1:exon:23843;Parent=Msa1086440-mRNA-1 |
| chr7_2 | exon | 87402733 | 87402851 | 87402733 | ID=Msa1086440-mRNA-1:exon:23844;Parent=Msa1086440-mRNA-1 |
| chr7_2 | CDS | 87402169 | 87402343 | 87402169 | ID=Msa1086440-mRNA-1:cds;Parent=Msa1086440-mRNA-1 |
| chr7_2 | CDS | 87402733 | 87402851 | 87402733 | ID=Msa1086440-mRNA-1:cds;Parent=Msa1086440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
