Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0582710 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0582710 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0582710 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0035090 | Msa0582710 | 0.835387 | 1.728914e-56 | -8.615850e-47 |
Msa0039200 | Msa0582710 | 0.802932 | 4.437174e-49 | -8.615850e-47 |
Msa0040190 | Msa0582710 | 0.810066 | 1.386283e-50 | -8.615850e-47 |
Msa0050360 | Msa0582710 | 0.804694 | 1.909942e-49 | -8.615850e-47 |
Msa0050400 | Msa0582710 | 0.805423 | 1.344714e-49 | -8.615850e-47 |
Msa0057740 | Msa0582710 | 0.800151 | 1.649059e-48 | -8.615850e-47 |
Msa0086820 | Msa0582710 | 0.801803 | 7.578793e-49 | -8.615850e-47 |
Msa0092750 | Msa0582710 | 0.838874 | 2.218359e-57 | -8.615850e-47 |
Msa0094420 | Msa0582710 | 0.804658 | 1.943705e-49 | -8.615850e-47 |
Msa0095140 | Msa0582710 | 0.857847 | 1.234905e-62 | -8.615850e-47 |
Msa0095180 | Msa0582710 | 0.807071 | 6.044335e-50 | -8.615850e-47 |
Msa0095200 | Msa0582710 | 0.882238 | 1.231441e-70 | -8.615850e-47 |
Msa0095240 | Msa0582710 | 0.832426 | 9.516996e-56 | -8.615850e-47 |
Msa0095270 | Msa0582710 | 0.861293 | 1.135512e-63 | -8.615850e-47 |
Msa0095300 | Msa0582710 | 0.805803 | 1.119287e-49 | -8.615850e-47 |
Msa0103060 | Msa0582710 | 0.809019 | 2.326882e-50 | -8.615850e-47 |
Msa0110710 | Msa0582710 | 0.802694 | 4.967093e-49 | -8.615850e-47 |
Msa0123940 | Msa0582710 | 0.801051 | 1.080518e-48 | -8.615850e-47 |
Msa0130120 | Msa0582710 | 0.820895 | 5.384682e-53 | -8.615850e-47 |
Msa0133670 | Msa0582710 | 0.805015 | 1.636514e-49 | -8.615850e-47 |
Msa0133880 | Msa0582710 | 0.811117 | 8.217891e-51 | -8.615850e-47 |
Msa0134550 | Msa0582710 | 0.810398 | 1.175792e-50 | -8.615850e-47 |
Msa0139740 | Msa0582710 | 0.816497 | 5.365085e-52 | -8.615850e-47 |
Msa0141670 | Msa0582710 | 0.808786 | 2.610145e-50 | -8.615850e-47 |
Msa0156780 | Msa0582710 | 0.819887 | 9.171885e-53 | -8.615850e-47 |
Msa0175900 | Msa0582710 | 0.830115 | 3.522513e-55 | -8.615850e-47 |
Msa0184120 | Msa0582710 | 0.807008 | 6.232749e-50 | -8.615850e-47 |
Msa0186750 | Msa0582710 | 0.805622 | 1.221593e-49 | -8.615850e-47 |
Msa0221860 | Msa0582710 | 0.825167 | 5.433512e-54 | -8.615850e-47 |
Msa0222070 | Msa0582710 | 0.828246 | 1.000409e-54 | -8.615850e-47 |
Msa0222120 | Msa0582710 | 0.825053 | 5.780709e-54 | -8.615850e-47 |
Msa0224960 | Msa0582710 | 0.835171 | 1.960082e-56 | -8.615850e-47 |
Msa0225010 | Msa0582710 | 0.827728 | 1.332488e-54 | -8.615850e-47 |
Msa0227290 | Msa0582710 | 0.830104 | 3.544038e-55 | -8.615850e-47 |
Msa0365150 | Msa0582710 | 0.808462 | 3.060683e-50 | -8.615850e-47 |
Msa0377460 | Msa0582710 | 0.803540 | 3.320176e-49 | -8.615850e-47 |
Msa0392410 | Msa0582710 | 0.804045 | 2.608464e-49 | -8.615850e-47 |
Msa0392450 | Msa0582710 | 0.801571 | 8.457258e-49 | -8.615850e-47 |
Msa0417630 | Msa0582710 | 0.813803 | 2.127009e-51 | -8.615850e-47 |
Msa0426860 | Msa0582710 | 0.822103 | 2.832541e-53 | -8.615850e-47 |
Msa0426890 | Msa0582710 | 0.811248 | 7.698331e-51 | -8.615850e-47 |
Msa0427050 | Msa0582710 | 0.829288 | 5.597983e-55 | -8.615850e-47 |
Msa0449930 | Msa0582710 | 0.801447 | 8.966513e-49 | -8.615850e-47 |
Msa0473450 | Msa0582710 | 0.814735 | 1.323941e-51 | -8.615850e-47 |
Msa0482020 | Msa0582710 | 0.813806 | 2.124007e-51 | -8.615850e-47 |
Msa0253410 | Msa0582710 | 0.810932 | 9.012307e-51 | -8.615850e-47 |
Msa0263620 | Msa0582710 | 0.825511 | 4.505371e-54 | -8.615850e-47 |
Msa0268180 | Msa0582710 | 0.923563 | 2.251610e-89 | -8.615850e-47 |
Msa0268220 | Msa0582710 | 0.825927 | 3.589610e-54 | -8.615850e-47 |
Msa0268340 | Msa0582710 | 0.841450 | 4.717147e-58 | -8.615850e-47 |
Msa0268380 | Msa0582710 | 0.889966 | 1.508133e-73 | -8.615850e-47 |
Msa0268420 | Msa0582710 | 0.925041 | 3.137776e-90 | -8.615850e-47 |
Msa0268460 | Msa0582710 | 0.828992 | 6.604546e-55 | -8.615850e-47 |
Msa0268500 | Msa0582710 | 0.833101 | 6.471617e-56 | -8.615850e-47 |
Msa0268540 | Msa0582710 | 0.908007 | 2.735969e-81 | -8.615850e-47 |
Msa0268650 | Msa0582710 | 0.922566 | 8.321336e-89 | -8.615850e-47 |
Msa0268690 | Msa0582710 | 0.814736 | 1.323416e-51 | -8.615850e-47 |
Msa0268730 | Msa0582710 | 0.859842 | 3.127084e-63 | -8.615850e-47 |
Msa0268760 | Msa0582710 | 0.841516 | 4.532272e-58 | -8.615850e-47 |
Msa0268850 | Msa0582710 | 0.916862 | 1.068581e-85 | -8.615850e-47 |
Msa0268900 | Msa0582710 | 0.825242 | 5.214603e-54 | -8.615850e-47 |
Msa0268930 | Msa0582710 | 0.862018 | 6.820937e-64 | -8.615850e-47 |
Msa0269060 | Msa0582710 | 0.933656 | 1.344465e-95 | -8.615850e-47 |
Msa0269100 | Msa0582710 | 0.835875 | 1.300774e-56 | -8.615850e-47 |
Msa0296930 | Msa0582710 | -0.801000 | 1.106774e-48 | -8.615850e-47 |
Msa0301460 | Msa0582710 | 0.804929 | 1.705736e-49 | -8.615850e-47 |
Msa0301800 | Msa0582710 | 0.805415 | 1.349818e-49 | -8.615850e-47 |
Msa0304870 | Msa0582710 | 0.817977 | 2.492531e-52 | -8.615850e-47 |
Msa0306130 | Msa0582710 | 0.811345 | 7.332326e-51 | -8.615850e-47 |
Msa0307490 | Msa0582710 | 0.812074 | 5.091078e-51 | -8.615850e-47 |
Msa0341260 | Msa0582710 | 0.818314 | 2.090874e-52 | -8.615850e-47 |
Msa0344200 | Msa0582710 | 0.833675 | 4.653487e-56 | -8.615850e-47 |
Msa0344250 | Msa0582710 | 0.828503 | 8.670997e-55 | -8.615850e-47 |
Msa0487560 | Msa0582710 | 0.815155 | 1.068417e-51 | -8.615850e-47 |
Msa0487620 | Msa0582710 | 0.806368 | 8.509754e-50 | -8.615850e-47 |
Msa0547050 | Msa0582710 | 0.801598 | 8.348713e-49 | -8.615850e-47 |
Msa0550720 | Msa0582710 | 0.805818 | 1.110683e-49 | -8.615850e-47 |
Msa0558890 | Msa0582710 | 0.811073 | 8.402667e-51 | -8.615850e-47 |
Msa0577140 | Msa0582710 | 0.811870 | 5.639203e-51 | -8.615850e-47 |
Msa0582530 | Msa0582710 | 0.934766 | 2.426953e-96 | -8.615850e-47 |
Msa0582570 | Msa0582710 | 0.831994 | 1.217078e-55 | -8.615850e-47 |
Msa0582580 | Msa0582710 | 0.831348 | 1.756697e-55 | -8.615850e-47 |
Msa0582620 | Msa0582710 | 0.882607 | 9.043186e-71 | -8.615850e-47 |
Msa0582660 | Msa0582710 | 0.802866 | 4.578547e-49 | -8.615850e-47 |
Msa0582710 | Msa0582740 | 0.865136 | 7.349265e-65 | -8.615850e-47 |
Msa0582710 | Msa0582830 | 0.941254 | 5.723580e-101 | -8.615850e-47 |
Msa0582710 | Msa0582900 | 0.858643 | 7.155258e-63 | -8.615850e-47 |
Msa0582710 | Msa0582930 | 0.811678 | 6.210028e-51 | -8.615850e-47 |
Msa0582710 | Msa0586890 | 0.814674 | 1.366160e-51 | -8.615850e-47 |
Msa0582710 | Msa0587060 | 0.806586 | 7.655440e-50 | -8.615850e-47 |
Msa0582710 | Msa0591370 | 0.825487 | 4.564368e-54 | -8.615850e-47 |
Msa0582710 | Msa0595780 | 0.817334 | 3.480301e-52 | -8.615850e-47 |
Msa0582710 | Msa0601780 | 0.801359 | 9.344711e-49 | -8.615850e-47 |
Msa0582710 | Msa0606140 | 0.809004 | 2.344579e-50 | -8.615850e-47 |
Msa0582710 | Msa0622390 | 0.806828 | 6.805943e-50 | -8.615850e-47 |
Msa0582710 | Msa0624240 | 0.804897 | 1.732859e-49 | -8.615850e-47 |
Msa0582710 | Msa0626890 | 0.809395 | 1.932752e-50 | -8.615850e-47 |
Msa0582710 | Msa0640880 | 0.805547 | 1.266442e-49 | -8.615850e-47 |
Msa0582710 | Msa0647110 | 0.827106 | 1.878384e-54 | -8.615850e-47 |
Msa0582710 | Msa0653710 | 0.803873 | 2.831795e-49 | -8.615850e-47 |
Msa0582710 | Msa0664790 | 0.803745 | 3.010110e-49 | -8.615850e-47 |
Msa0582710 | Msa0698880 | 0.805835 | 1.101838e-49 | -8.615850e-47 |
Msa0582710 | Msa0698900 | 0.807511 | 4.876724e-50 | -8.615850e-47 |
Msa0582710 | Msa0702070 | 0.827318 | 1.671504e-54 | -8.615850e-47 |
Msa0582710 | Msa0702120 | 0.819130 | 1.364764e-52 | -8.615850e-47 |
Msa0582710 | Msa0704750 | 0.803807 | 2.922332e-49 | -8.615850e-47 |
Msa0582710 | Msa0706710 | 0.803038 | 4.217885e-49 | -8.615850e-47 |
Msa0582710 | Msa0727020 | 0.841936 | 3.511557e-58 | -8.615850e-47 |
Msa0582710 | Msa0736930 | 0.805511 | 1.288390e-49 | -8.615850e-47 |
Msa0582710 | Msa0766880 | 0.847248 | 1.303737e-59 | -8.615850e-47 |
Msa0582710 | Msa0772210 | 0.822258 | 2.607875e-53 | -8.615850e-47 |
Msa0582710 | Msa0782330 | 0.807222 | 5.615626e-50 | -8.615850e-47 |
Msa0582710 | Msa0804930 | 0.833746 | 4.468480e-56 | -8.615850e-47 |
Msa0582710 | Msa0821490 | 0.803941 | 2.741130e-49 | -8.615850e-47 |
Msa0582710 | Msa0855490 | 0.828711 | 7.724634e-55 | -8.615850e-47 |
Msa0582710 | Msa0860270 | 0.805175 | 1.515330e-49 | -8.615850e-47 |
Msa0582710 | Msa0867990 | 0.805624 | 1.220058e-49 | -8.615850e-47 |
Msa0582710 | Msa0900320 | 0.809580 | 1.763990e-50 | -8.615850e-47 |
Msa0582710 | Msa0910650 | 0.804006 | 2.657719e-49 | -8.615850e-47 |
Msa0582710 | Msa0924820 | 0.801232 | 9.923291e-49 | -8.615850e-47 |
Msa0582710 | Msa0924860 | 0.838273 | 3.170808e-57 | -8.615850e-47 |
Msa0582710 | Msa0924890 | 0.828830 | 7.228251e-55 | -8.615850e-47 |
Msa0582710 | Msa0925020 | 0.817883 | 2.617097e-52 | -8.615850e-47 |
Msa0582710 | Msa0931090 | 0.916670 | 1.346486e-85 | -8.615850e-47 |
Msa0582710 | Msa0931150 | 0.926134 | 7.111870e-91 | -8.615850e-47 |
Msa0582710 | Msa0931200 | 0.815512 | 8.900336e-52 | -8.615850e-47 |
Msa0582710 | Msa0931280 | 0.897085 | 1.978638e-76 | -8.615850e-47 |
Msa0582710 | Msa0983670 | 0.818099 | 2.339424e-52 | -8.615850e-47 |
Msa0582710 | Msa0983710 | 0.832971 | 6.970354e-56 | -8.615850e-47 |
Msa0582710 | Msa0992570 | 0.827095 | 1.889878e-54 | -8.615850e-47 |
Msa0582710 | Msa0992590 | 0.825550 | 4.410007e-54 | -8.615850e-47 |
Msa0582710 | Msa1002040 | 0.825522 | 4.476967e-54 | -8.615850e-47 |
Msa0582710 | Msa1024580 | 0.804195 | 2.427664e-49 | -8.615850e-47 |
Msa0582710 | Msa1030280 | 0.831179 | 1.933329e-55 | -8.615850e-47 |
Msa0582710 | Msa1049440 | 0.810785 | 9.697011e-51 | -8.615850e-47 |
Msa0582710 | Msa1070900 | 0.814153 | 1.780864e-51 | -8.615850e-47 |
Msa0582710 | Msa1079610 | 0.802308 | 5.965997e-49 | -8.615850e-47 |
Msa0582710 | Msa1086020 | 0.849934 | 2.350954e-60 | -8.615850e-47 |
Msa0582710 | Msa1086060 | 0.879418 | 1.266506e-69 | -8.615850e-47 |
Msa0582710 | Msa1086160 | 0.890650 | 8.129588e-74 | -8.615850e-47 |
Msa0582710 | Msa1086170 | 0.899187 | 2.540288e-77 | -8.615850e-47 |
Msa0582710 | Msa1086260 | 0.840231 | 9.849715e-58 | -8.615850e-47 |
Msa0582710 | Msa1086290 | 0.900153 | 9.741150e-78 | -8.615850e-47 |
Msa0582710 | Msa1086330 | 0.821615 | 3.674895e-53 | -8.615850e-47 |
Msa0582710 | Msa1086340 | 0.826410 | 2.754408e-54 | -8.615850e-47 |
Msa0582710 | Msa1086370 | 0.887839 | 1.002600e-72 | -8.615850e-47 |
Msa0582710 | Msa1086440 | 0.873890 | 1.035338e-67 | -8.615850e-47 |
Msa0582710 | Msa1086480 | 0.893021 | 9.259599e-75 | -8.615850e-47 |
Msa0582710 | Msa1086520 | 0.824595 | 7.413272e-54 | -8.615850e-47 |
Msa0582710 | Msa1086630 | 0.838464 | 2.832396e-57 | -8.615850e-47 |
Msa0582710 | Msa1086690 | 0.836065 | 1.163753e-56 | -8.615850e-47 |
Msa0582710 | Msa1086830 | 0.839727 | 1.332633e-57 | -8.615850e-47 |
Msa0582710 | Msa1086870 | 0.870740 | 1.161019e-66 | -8.615850e-47 |
Msa0582710 | Msa1090230 | 0.825416 | 4.744612e-54 | -8.615850e-47 |
Msa0582710 | Msa1091690 | 0.861759 | 8.188288e-64 | -8.615850e-47 |
Msa0582710 | Msa1123340 | 0.810196 | 1.299762e-50 | -8.615850e-47 |
Msa0582710 | Msa1124440 | 0.817414 | 3.339017e-52 | -8.615850e-47 |
Msa0582710 | Msa1132540 | 0.809590 | 1.754987e-50 | -8.615850e-47 |
Msa0582710 | Msa1143140 | 0.871144 | 8.547438e-67 | -8.615850e-47 |
Msa0582710 | Msa1157160 | 0.829930 | 3.906355e-55 | -8.615850e-47 |
Msa0582710 | Msa1173410 | 0.806585 | 7.657795e-50 | -8.615850e-47 |
Msa0582710 | Msa1195860 | 0.831491 | 1.619728e-55 | -8.615850e-47 |
Msa0582710 | Msa1198420 | 0.804034 | 2.621593e-49 | -8.615850e-47 |
Msa0582710 | Msa1209390 | 0.815523 | 8.851639e-52 | -8.615850e-47 |
Msa0582710 | Msa1220740 | 0.804681 | 1.921894e-49 | -8.615850e-47 |
Msa0582710 | Msa1248400 | 0.815425 | 9.304476e-52 | -8.615850e-47 |
Msa0582710 | Msa1284030 | 0.813968 | 1.956721e-51 | -8.615850e-47 |
Msa0582710 | Msa1298740 | 0.817192 | 3.746114e-52 | -8.615850e-47 |
Msa0582710 | Msa1302920 | 0.815001 | 1.156217e-51 | -8.615850e-47 |
Msa0582710 | Msa1309910 | 0.821988 | 3.012298e-53 | -8.615850e-47 |
Msa0582710 | Msa1323060 | 0.803370 | 3.601282e-49 | -8.615850e-47 |
Msa0582710 | Msa1327820 | 0.825037 | 5.830950e-54 | -8.615850e-47 |
Msa0582710 | Msa1339250 | 0.807515 | 4.868851e-50 | -8.615850e-47 |
Msa0582710 | Msa1351560 | 0.800142 | 1.655774e-48 | -8.615850e-47 |
Msa0582710 | Msa1352820 | 0.810830 | 9.483458e-51 | -8.615850e-47 |
Msa0582710 | Msa1354850 | 0.852678 | 3.944322e-61 | -8.615850e-47 |
Msa0582710 | Msa1354890 | 0.877640 | 5.342381e-69 | -8.615850e-47 |
Msa0582710 | Msa1354930 | 0.800332 | 1.514326e-48 | -8.615850e-47 |
Msa0582710 | Msa1355020 | 0.850061 | 2.166419e-60 | -8.615850e-47 |
Msa0582710 | Msa1355060 | 0.869386 | 3.219642e-66 | -8.615850e-47 |
Msa0582710 | Msa1365210 | 0.807711 | 4.423691e-50 | -8.615850e-47 |
Msa0582710 | Msa1367940 | 0.804461 | 2.136753e-49 | -8.615850e-47 |
Msa0582710 | Msa1371250 | 0.807768 | 4.300846e-50 | -8.615850e-47 |
Msa0582710 | Msa1380540 | 0.839526 | 1.503151e-57 | -8.615850e-47 |
Msa0582710 | Msa1385940 | 0.827884 | 1.222452e-54 | -8.615850e-47 |
Msa0582710 | Msa1387090 | 0.817212 | 3.706364e-52 | -8.615850e-47 |
Msa0582710 | Msa1394050 | 0.839462 | 1.562126e-57 | -8.615850e-47 |
Msa0582710 | Msa1394090 | 0.837632 | 4.634400e-57 | -8.615850e-47 |
Msa0582710 | Msa1394100 | 0.834384 | 3.093041e-56 | -8.615850e-47 |
Msa0582710 | Msa1394140 | 0.832124 | 1.130706e-55 | -8.615850e-47 |
Msa0582710 | Msa1394170 | 0.821854 | 3.235517e-53 | -8.615850e-47 |
Msa0582710 | Msa1394240 | 0.902580 | 8.384621e-79 | -8.615850e-47 |
Msa0582710 | Msa1394280 | 0.837505 | 4.995889e-57 | -8.615850e-47 |
Msa0582710 | Msa1406230 | 0.818430 | 1.968675e-52 | -8.615850e-47 |
Msa0582710 | Msa1415120 | 0.824211 | 9.127196e-54 | -8.615850e-47 |
Msa0582710 | Msa1426870 | 0.822066 | 2.889255e-53 | -8.615850e-47 |
Msa0582710 | Msa1435470 | 0.810660 | 1.031954e-50 | -8.615850e-47 |
Msa0582710 | Msa1458920 | 0.815609 | 8.469219e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0582710 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
Msa0582710 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
Msa0582710 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0582710 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
Msa0582710 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 4_2:-1170587 | Msa0582710:CDS |
ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 4_2:+1170484 | None:intergenic |
AATGATCCAGGACGTAATCC+TGG | 0.474800 | 4_2:-1169937 | Msa0582710:CDS |
GGATTCCTATCTAATGATCC+AGG | 0.536202 | 4_2:-1169949 | Msa0582710:CDS |
TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 4_2:+1169931 | None:intergenic |
TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 4_2:+1169944 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTCCAAATATTAAAATTTT+TGG | - | chr4_2:1170213-1170232 | Msa0582710:intron | 10.0% |
!!! | TATCCAAAAATTTTAATATT+TGG | + | chr4_2:1170219-1170238 | None:intergenic | 10.0% |
!! | ATTTCAAAAAAAAAAAACTT+AGG | + | chr4_2:1170370-1170389 | None:intergenic | 10.0% |
!!! | AATTTTAATATTTGGAATCA+AGG | + | chr4_2:1170211-1170230 | None:intergenic | 15.0% |
!!! | CGTTTTTTTTTTAATTATCT+TGG | - | chr4_2:1170465-1170484 | Msa0582710:CDS | 15.0% |
!! | GAAAAAACTACTTGAATAAA+GGG | + | chr4_2:1169970-1169989 | None:intergenic | 20.0% |
!! | AGAAAAAACTACTTGAATAA+AGG | + | chr4_2:1169971-1169990 | None:intergenic | 20.0% |
!!! | TTATTCAAGTAGTTTTTTCT+TGG | - | chr4_2:1169971-1169990 | Msa0582710:CDS | 20.0% |
!! | TGAAAATTCTATTATTCGAT+TGG | - | chr4_2:1170257-1170276 | Msa0582710:intron | 20.0% |
!!! | TGTGGATATGAAAAAAATTT+TGG | - | chr4_2:1170308-1170327 | Msa0582710:intron | 20.0% |
!! | TCTTATAAACTTAGTATCAA+AGG | - | chr4_2:1170399-1170418 | Msa0582710:intron | 20.0% |
!!! | TTTTTCTCTTAGCTTTTGTT+TGG | - | chr4_2:1170063-1170082 | Msa0582710:intron | 25.0% |
!!! | TTTGTTTCTCTTTTCATCTT+CGG | - | chr4_2:1170540-1170559 | Msa0582710:CDS | 25.0% |
! | AATTGGATTCAAAAAAGCGT+AGG | + | chr4_2:1170012-1170031 | None:intergenic | 30.0% |
ACTGGCATAAAATCTACAAT+TGG | + | chr4_2:1170029-1170048 | None:intergenic | 30.0% | |
!! | AAAAAGAGTAAGGGTATTAC+TGG | + | chr4_2:1170047-1170066 | None:intergenic | 30.0% |
GCTAAGAGAAAAAAGAGTAA+GGG | + | chr4_2:1170056-1170075 | None:intergenic | 30.0% | |
AGCTAAGAGAAAAAAGAGTA+AGG | + | chr4_2:1170057-1170076 | None:intergenic | 30.0% | |
!! | AATCAAGATCTAGGTATTGG+TGG | + | chr4_2:1170289-1170308 | None:intergenic | 35.0% |
CACAATCAAGATCTAGGTAT+TGG | + | chr4_2:1170292-1170311 | None:intergenic | 35.0% | |
CAATACCTAGATCTTGATTG+TGG | - | chr4_2:1170290-1170309 | Msa0582710:intron | 35.0% | |
CATATCCACAATCAAGATCT+AGG | + | chr4_2:1170298-1170317 | None:intergenic | 35.0% | |
GAGAATCTATTCTCTTTCTC+TGG | - | chr4_2:1170442-1170461 | Msa0582710:CDS | 35.0% | |
! | TTCAAAAAAGCGTAGGCTTC+AGG | + | chr4_2:1170005-1170024 | None:intergenic | 40.0% |
GGATTCCTATCTAATGATCC+AGG | - | chr4_2:1170561-1170580 | Msa0582710:CDS | 40.0% | |
TACGTCCTGGATCATTAGAT+AGG | + | chr4_2:1170569-1170588 | None:intergenic | 40.0% | |
!! | CAAGATCTAGGTATTGGTGG+TGG | + | chr4_2:1170286-1170305 | None:intergenic | 45.0% |
AATGATCCAGGACGTAATCC+TGG | - | chr4_2:1170573-1170592 | Msa0582710:CDS | 45.0% | |
!!! | AATAAATTCTTAATTTTTTT+CGG | + | chr4_2:1170134-1170153 | None:intergenic | 5.0% |
TCACGTCCAGGATTACGTCC+TGG | + | chr4_2:1170582-1170601 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 1169924 | 1170608 | 1169924 | ID=Msa0582710;Name=Msa0582710 |
chr4_2 | mRNA | 1169924 | 1170608 | 1169924 | ID=Msa0582710-mRNA-1;Parent=Msa0582710;Name=Msa0582710-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
chr4_2 | exon | 1170434 | 1170608 | 1170434 | ID=Msa0582710-mRNA-1:exon:264;Parent=Msa0582710-mRNA-1 |
chr4_2 | exon | 1169924 | 1170042 | 1169924 | ID=Msa0582710-mRNA-1:exon:263;Parent=Msa0582710-mRNA-1 |
chr4_2 | CDS | 1170434 | 1170608 | 1170434 | ID=Msa0582710-mRNA-1:cds;Parent=Msa0582710-mRNA-1 |
chr4_2 | CDS | 1169924 | 1170042 | 1169924 | ID=Msa0582710-mRNA-1:cds;Parent=Msa0582710-mRNA-1 |
Gene Sequence |
Protein sequence |