Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086520 | AES88250.1 | 89.809 | 157 | 3 | 2 | 46 | 189 | 7 | 163 | 3.58e-91 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086520 | sp|P49169|RR18_PEA | 81.720 | 93 | 17 | 0 | 112 | 204 | 1 | 93 | 4.41e-44 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086520 | G7JH54 | 89.809 | 157 | 3 | 2 | 46 | 189 | 7 | 163 | 1.71e-91 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa1086520 | 0.812456 | 4.201741e-51 | -8.615850e-47 |
| Msa0030710 | Msa1086520 | 0.813705 | 2.235397e-51 | -8.615850e-47 |
| Msa0032040 | Msa1086520 | 0.823215 | 1.561933e-53 | -8.615850e-47 |
| Msa0034800 | Msa1086520 | 0.834633 | 2.677166e-56 | -8.615850e-47 |
| Msa0035090 | Msa1086520 | 0.802798 | 4.728839e-49 | -8.615850e-47 |
| Msa0039200 | Msa1086520 | 0.863277 | 2.792669e-64 | -8.615850e-47 |
| Msa0040190 | Msa1086520 | 0.869566 | 2.812689e-66 | -8.615850e-47 |
| Msa0047760 | Msa1086520 | 0.804843 | 1.778391e-49 | -8.615850e-47 |
| Msa0065190 | Msa1086520 | 0.827999 | 1.146987e-54 | -8.615850e-47 |
| Msa0072710 | Msa1086520 | 0.805645 | 1.207967e-49 | -8.615850e-47 |
| Msa0082250 | Msa1086520 | 0.815299 | 9.928439e-52 | -8.615850e-47 |
| Msa0083200 | Msa1086520 | 0.807047 | 6.115421e-50 | -8.615850e-47 |
| Msa0084550 | Msa1086520 | 0.837055 | 6.513544e-57 | -8.615850e-47 |
| Msa0086820 | Msa1086520 | 0.860684 | 1.739934e-63 | -8.615850e-47 |
| Msa0087880 | Msa1086520 | 0.877058 | 8.518178e-69 | -8.615850e-47 |
| Msa0092750 | Msa1086520 | 0.819080 | 1.401540e-52 | -8.615850e-47 |
| Msa0095140 | Msa1086520 | 0.934145 | 6.352380e-96 | -8.615850e-47 |
| Msa0095240 | Msa1086520 | 0.958252 | 3.731502e-116 | -8.615850e-47 |
| Msa0095270 | Msa1086520 | 0.943391 | 1.309693e-102 | -8.615850e-47 |
| Msa0099830 | Msa1086520 | 0.803643 | 3.160434e-49 | -8.615850e-47 |
| Msa0103060 | Msa1086520 | 0.803325 | 3.679572e-49 | -8.615850e-47 |
| Msa0110500 | Msa1086520 | 0.803290 | 3.741228e-49 | -8.615850e-47 |
| Msa0114960 | Msa1086520 | 0.815592 | 8.541490e-52 | -8.615850e-47 |
| Msa0606680 | Msa1086520 | 0.847455 | 1.144363e-59 | -8.615850e-47 |
| Msa0619060 | Msa1086520 | 0.803592 | 3.238788e-49 | -8.615850e-47 |
| Msa0619480 | Msa1086520 | 0.805753 | 1.146423e-49 | -8.615850e-47 |
| Msa0626890 | Msa1086520 | 0.819078 | 1.402465e-52 | -8.615850e-47 |
| Msa0635990 | Msa1086520 | 0.835656 | 1.477904e-56 | -8.615850e-47 |
| Msa0638040 | Msa1086520 | 0.809180 | 2.149126e-50 | -8.615850e-47 |
| Msa0657820 | Msa1086520 | 0.803541 | 3.318136e-49 | -8.615850e-47 |
| Msa0659130 | Msa1086520 | 0.810350 | 1.204081e-50 | -8.615850e-47 |
| Msa0659640 | Msa1086520 | 0.813600 | 2.358568e-51 | -8.615850e-47 |
| Msa0665010 | Msa1086520 | 0.820050 | 8.418457e-53 | -8.615850e-47 |
| Msa0665040 | Msa1086520 | 0.812516 | 4.076041e-51 | -8.615850e-47 |
| Msa0668630 | Msa1086520 | 0.930274 | 2.078249e-93 | -8.615850e-47 |
| Msa0677110 | Msa1086520 | 0.801147 | 1.032793e-48 | -8.615850e-47 |
| Msa0687320 | Msa1086520 | 0.837515 | 4.968116e-57 | -8.615850e-47 |
| Msa0688760 | Msa1086520 | 0.805862 | 1.087510e-49 | -8.615850e-47 |
| Msa0705610 | Msa1086520 | 0.803739 | 3.019153e-49 | -8.615850e-47 |
| Msa0706710 | Msa1086520 | 0.841372 | 4.944375e-58 | -8.615850e-47 |
| Msa0707870 | Msa1086520 | 0.803324 | 3.680223e-49 | -8.615850e-47 |
| Msa0708120 | Msa1086520 | 0.800178 | 1.627646e-48 | -8.615850e-47 |
| Msa0714020 | Msa1086520 | 0.804662 | 1.939444e-49 | -8.615850e-47 |
| Msa0714160 | Msa1086520 | 0.807782 | 4.271944e-50 | -8.615850e-47 |
| Msa0720850 | Msa1086520 | 0.800029 | 1.746000e-48 | -8.615850e-47 |
| Msa0727020 | Msa1086520 | 0.844031 | 9.723900e-59 | -8.615850e-47 |
| Msa0727040 | Msa1086520 | 0.867547 | 1.262996e-65 | -8.615850e-47 |
| Msa0729590 | Msa1086520 | 0.802482 | 5.495299e-49 | -8.615850e-47 |
| Msa0736330 | Msa1086520 | 0.828583 | 8.293165e-55 | -8.615850e-47 |
| Msa0736930 | Msa1086520 | 0.812122 | 4.969349e-51 | -8.615850e-47 |
| Msa0739570 | Msa1086520 | 0.821431 | 4.052055e-53 | -8.615850e-47 |
| Msa0741600 | Msa1086520 | 0.814625 | 1.400513e-51 | -8.615850e-47 |
| Msa0766880 | Msa1086520 | 0.858892 | 6.031242e-63 | -8.615850e-47 |
| Msa0772210 | Msa1086520 | 0.834791 | 2.443016e-56 | -8.615850e-47 |
| Msa0778060 | Msa1086520 | 0.828653 | 7.974848e-55 | -8.615850e-47 |
| Msa0782330 | Msa1086520 | 0.814590 | 1.425923e-51 | -8.615850e-47 |
| Msa0795330 | Msa1086520 | -0.805319 | 1.413859e-49 | -8.615850e-47 |
| Msa0801390 | Msa1086520 | 0.827481 | 1.527952e-54 | -8.615850e-47 |
| Msa0804930 | Msa1086520 | 0.805601 | 1.233532e-49 | -8.615850e-47 |
| Msa0815950 | Msa1086520 | 0.809067 | 2.272307e-50 | -8.615850e-47 |
| Msa0834160 | Msa1086520 | 0.812105 | 5.010816e-51 | -8.615850e-47 |
| Msa0839730 | Msa1086520 | 0.847968 | 8.264321e-60 | -8.615850e-47 |
| Msa0841980 | Msa1086520 | 0.813309 | 2.731877e-51 | -8.615850e-47 |
| Msa0130120 | Msa1086520 | 0.808307 | 3.302233e-50 | -8.615850e-47 |
| Msa0130620 | Msa1086520 | 0.837127 | 6.243845e-57 | -8.615850e-47 |
| Msa0133670 | Msa1086520 | 0.862383 | 5.268701e-64 | -8.615850e-47 |
| Msa0133880 | Msa1086520 | 0.863172 | 3.008125e-64 | -8.615850e-47 |
| Msa0134550 | Msa1086520 | 0.872233 | 3.721267e-67 | -8.615850e-47 |
| Msa0139740 | Msa1086520 | 0.821209 | 4.559763e-53 | -8.615850e-47 |
| Msa0141670 | Msa1086520 | 0.807698 | 4.451061e-50 | -8.615850e-47 |
| Msa0143210 | Msa1086520 | 0.817849 | 2.664198e-52 | -8.615850e-47 |
| Msa0144510 | Msa1086520 | 0.807184 | 5.722873e-50 | -8.615850e-47 |
| Msa0156780 | Msa1086520 | 0.850958 | 1.212158e-60 | -8.615850e-47 |
| Msa0176530 | Msa1086520 | 0.837321 | 5.569153e-57 | -8.615850e-47 |
| Msa0181290 | Msa1086520 | 0.827881 | 1.224504e-54 | -8.615850e-47 |
| Msa0184120 | Msa1086520 | 0.865927 | 4.139915e-65 | -8.615850e-47 |
| Msa0189050 | Msa1086520 | 0.862156 | 6.185563e-64 | -8.615850e-47 |
| Msa0193200 | Msa1086520 | 0.804500 | 2.096875e-49 | -8.615850e-47 |
| Msa0197600 | Msa1086520 | 0.802480 | 5.500146e-49 | -8.615850e-47 |
| Msa0198220 | Msa1086520 | 0.800390 | 1.473933e-48 | -8.615850e-47 |
| Msa0201910 | Msa1086520 | 0.816005 | 6.910774e-52 | -8.615850e-47 |
| Msa0206600 | Msa1086520 | 0.806727 | 7.149165e-50 | -8.615850e-47 |
| Msa0207220 | Msa1086520 | 0.818088 | 2.352105e-52 | -8.615850e-47 |
| Msa0207530 | Msa1086520 | 0.821402 | 4.116364e-53 | -8.615850e-47 |
| Msa0207900 | Msa1086520 | 0.818239 | 2.174182e-52 | -8.615850e-47 |
| Msa0218480 | Msa1086520 | 0.826920 | 2.081395e-54 | -8.615850e-47 |
| Msa0218590 | Msa1086520 | 0.828959 | 6.727869e-55 | -8.615850e-47 |
| Msa0221860 | Msa1086520 | 0.936975 | 7.327052e-98 | -8.615850e-47 |
| Msa0222510 | Msa1086520 | 0.803333 | 3.664571e-49 | -8.615850e-47 |
| Msa0227290 | Msa1086520 | 0.815593 | 8.536463e-52 | -8.615850e-47 |
| Msa0231310 | Msa1086520 | 0.864732 | 9.835963e-65 | -8.615850e-47 |
| Msa0369750 | Msa1086520 | 0.821705 | 3.502427e-53 | -8.615850e-47 |
| Msa0370210 | Msa1086520 | 0.809117 | 2.217289e-50 | -8.615850e-47 |
| Msa0370510 | Msa1086520 | 0.815263 | 1.011219e-51 | -8.615850e-47 |
| Msa0379720 | Msa1086520 | 0.802082 | 6.640071e-49 | -8.615850e-47 |
| Msa0379900 | Msa1086520 | 0.810454 | 1.143414e-50 | -8.615850e-47 |
| Msa0386390 | Msa1086520 | 0.809163 | 2.167604e-50 | -8.615850e-47 |
| Msa0390950 | Msa1086520 | 0.801951 | 7.065568e-49 | -8.615850e-47 |
| Msa0398610 | Msa1086520 | 0.878263 | 3.234292e-69 | -8.615850e-47 |
| Msa0398620 | Msa1086520 | 0.824628 | 7.280233e-54 | -8.615850e-47 |
| Msa0421100 | Msa1086520 | 0.806260 | 8.967851e-50 | -8.615850e-47 |
| Msa0423600 | Msa1086520 | 0.818266 | 2.144548e-52 | -8.615850e-47 |
| Msa0426990 | Msa1086520 | 0.801416 | 9.099226e-49 | -8.615850e-47 |
| Msa0427050 | Msa1086520 | 0.839756 | 1.309853e-57 | -8.615850e-47 |
| Msa0449900 | Msa1086520 | 0.920323 | 1.479514e-87 | -8.615850e-47 |
| Msa0449930 | Msa1086520 | 0.822889 | 1.860825e-53 | -8.615850e-47 |
| Msa0451370 | Msa1086520 | 0.814456 | 1.526603e-51 | -8.615850e-47 |
| Msa0456480 | Msa1086520 | 0.806674 | 7.333245e-50 | -8.615850e-47 |
| Msa0459120 | Msa1086520 | 0.807311 | 5.377546e-50 | -8.615850e-47 |
| Msa0463960 | Msa1086520 | 0.816840 | 4.494847e-52 | -8.615850e-47 |
| Msa0464500 | Msa1086520 | 0.808238 | 3.416807e-50 | -8.615850e-47 |
| Msa0470650 | Msa1086520 | 0.813282 | 2.770348e-51 | -8.615850e-47 |
| Msa0471080 | Msa1086520 | 0.810913 | 9.099688e-51 | -8.615850e-47 |
| Msa0471090 | Msa1086520 | 0.812354 | 4.422412e-51 | -8.615850e-47 |
| Msa0472870 | Msa1086520 | 0.820899 | 5.373252e-53 | -8.615850e-47 |
| Msa0473320 | Msa1086520 | 0.801457 | 8.922496e-49 | -8.615850e-47 |
| Msa0473450 | Msa1086520 | 0.828901 | 6.949174e-55 | -8.615850e-47 |
| Msa0475360 | Msa1086520 | 0.805708 | 1.171661e-49 | -8.615850e-47 |
| Msa0475740 | Msa1086520 | 0.802435 | 5.617974e-49 | -8.615850e-47 |
| Msa0475830 | Msa1086520 | 0.882079 | 1.406549e-70 | -8.615850e-47 |
| Msa0479790 | Msa1086520 | 0.808598 | 2.862386e-50 | -8.615850e-47 |
| Msa0983670 | Msa1086520 | 0.923716 | 1.839882e-89 | -8.615850e-47 |
| Msa1008960 | Msa1086520 | 0.815113 | 1.091498e-51 | -8.615850e-47 |
| Msa1016130 | Msa1086520 | 0.841613 | 4.272848e-58 | -8.615850e-47 |
| Msa1024580 | Msa1086520 | 0.816017 | 6.868965e-52 | -8.615850e-47 |
| Msa1033230 | Msa1086520 | 0.803747 | 3.008368e-49 | -8.615850e-47 |
| Msa1036350 | Msa1086520 | 0.801761 | 7.730463e-49 | -8.615850e-47 |
| Msa1049440 | Msa1086520 | 0.842524 | 2.453107e-58 | -8.615850e-47 |
| Msa1063180 | Msa1086520 | 0.822204 | 2.684150e-53 | -8.615850e-47 |
| Msa1070930 | Msa1086520 | 0.806031 | 1.002302e-49 | -8.615850e-47 |
| Msa1072770 | Msa1086520 | 0.820207 | 7.747641e-53 | -8.615850e-47 |
| Msa1079610 | Msa1086520 | 0.864479 | 1.180519e-64 | -8.615850e-47 |
| Msa1081600 | Msa1086520 | 0.804876 | 1.750111e-49 | -8.615850e-47 |
| Msa1086020 | Msa1086520 | 0.960473 | 1.346396e-118 | -8.615850e-47 |
| Msa1086060 | Msa1086520 | 0.836831 | 7.428775e-57 | -8.615850e-47 |
| Msa1086160 | Msa1086520 | 0.871924 | 4.715724e-67 | -8.615850e-47 |
| Msa1086170 | Msa1086520 | 0.822369 | 2.457964e-53 | -8.615850e-47 |
| Msa1086260 | Msa1086520 | 0.851138 | 1.079013e-60 | -8.615850e-47 |
| Msa1086290 | Msa1086520 | 0.843542 | 1.314148e-58 | -8.615850e-47 |
| Msa1086330 | Msa1086520 | 0.960644 | 8.619312e-119 | -8.615850e-47 |
| Msa1086340 | Msa1086520 | 0.948398 | 1.021278e-106 | -8.615850e-47 |
| Msa1086370 | Msa1086520 | 0.856441 | 3.210364e-62 | -8.615850e-47 |
| Msa1086410 | Msa1086520 | 0.933586 | 1.497283e-95 | -8.615850e-47 |
| Msa1086440 | Msa1086520 | 0.841659 | 4.154281e-58 | -8.615850e-47 |
| Msa1086480 | Msa1086520 | 0.816914 | 4.325449e-52 | -8.615850e-47 |
| Msa1086520 | Msa1086630 | 0.958802 | 9.548472e-117 | -8.615850e-47 |
| Msa1086520 | Msa1086690 | 0.973195 | 5.101113e-136 | -8.615850e-47 |
| Msa1086520 | Msa1086830 | 0.956339 | 3.726101e-114 | -8.615850e-47 |
| Msa1086520 | Msa1086870 | 0.841817 | 3.775468e-58 | -8.615850e-47 |
| Msa1086520 | Msa1087000 | 0.937466 | 3.312333e-98 | -8.615850e-47 |
| Msa1086520 | Msa1098570 | 0.811675 | 6.219328e-51 | -8.615850e-47 |
| Msa1086520 | Msa1108530 | 0.831819 | 1.345033e-55 | -8.615850e-47 |
| Msa1086520 | Msa1117830 | 0.810184 | 1.307937e-50 | -8.615850e-47 |
| Msa1086520 | Msa1120540 | 0.802799 | 4.726134e-49 | -8.615850e-47 |
| Msa1086520 | Msa1122480 | 0.819190 | 1.322847e-52 | -8.615850e-47 |
| Msa1086520 | Msa1123340 | 0.821641 | 3.624269e-53 | -8.615850e-47 |
| Msa1086520 | Msa1124440 | 0.863695 | 2.071213e-64 | -8.615850e-47 |
| Msa1086520 | Msa1125610 | 0.803835 | 2.884254e-49 | -8.615850e-47 |
| Msa1086520 | Msa1126910 | 0.828260 | 9.922406e-55 | -8.615850e-47 |
| Msa1086520 | Msa1130070 | 0.819514 | 1.115736e-52 | -8.615850e-47 |
| Msa1086520 | Msa1130700 | 0.815560 | 8.686393e-52 | -8.615850e-47 |
| Msa1086520 | Msa1140940 | 0.809725 | 1.641757e-50 | -8.615850e-47 |
| Msa1086520 | Msa1143140 | 0.804440 | 2.157959e-49 | -8.615850e-47 |
| Msa1086520 | Msa1152280 | 0.833729 | 4.512574e-56 | -8.615850e-47 |
| Msa1086520 | Msa1157160 | 0.833017 | 6.790049e-56 | -8.615850e-47 |
| Msa1086520 | Msa1161120 | 0.811831 | 5.749028e-51 | -8.615850e-47 |
| Msa1086520 | Msa1161160 | 0.827295 | 1.692820e-54 | -8.615850e-47 |
| Msa1086520 | Msa1161520 | 0.816360 | 5.755885e-52 | -8.615850e-47 |
| Msa1086520 | Msa1164650 | 0.820014 | 8.576562e-53 | -8.615850e-47 |
| Msa1086520 | Msa1166370 | 0.804827 | 1.791976e-49 | -8.615850e-47 |
| Msa1086520 | Msa1168130 | 0.849194 | 3.781614e-60 | -8.615850e-47 |
| Msa1086520 | Msa1173410 | 0.802192 | 6.304726e-49 | -8.615850e-47 |
| Msa1086520 | Msa1198420 | 0.819830 | 9.450595e-53 | -8.615850e-47 |
| Msa1086520 | Msa1199690 | 0.828080 | 1.096784e-54 | -8.615850e-47 |
| Msa1086520 | Msa1204110 | 0.829771 | 4.271338e-55 | -8.615850e-47 |
| Msa1086520 | Msa1208070 | 0.802085 | 6.632770e-49 | -8.615850e-47 |
| Msa1086520 | Msa1209650 | 0.823987 | 1.030196e-53 | -8.615850e-47 |
| Msa1086520 | Msa1211100 | 0.815842 | 7.515723e-52 | -8.615850e-47 |
| Msa1086520 | Msa1211120 | 0.804495 | 2.101955e-49 | -8.615850e-47 |
| Msa1086520 | Msa1211880 | 0.865950 | 4.071429e-65 | -8.615850e-47 |
| Msa1086520 | Msa1215660 | 0.819459 | 1.148754e-52 | -8.615850e-47 |
| Msa1086520 | Msa1245300 | 0.809799 | 1.582599e-50 | -8.615850e-47 |
| Msa1086520 | Msa1246420 | 0.824173 | 9.318352e-54 | -8.615850e-47 |
| Msa1086520 | Msa1251960 | 0.810956 | 8.907394e-51 | -8.615850e-47 |
| Msa1086520 | Msa1252040 | 0.852916 | 3.372306e-61 | -8.615850e-47 |
| Msa1086520 | Msa1264230 | 0.805853 | 1.092409e-49 | -8.615850e-47 |
| Msa1086520 | Msa1267800 | 0.807246 | 5.551688e-50 | -8.615850e-47 |
| Msa1086520 | Msa1279240 | 0.827801 | 1.280258e-54 | -8.615850e-47 |
| Msa1086520 | Msa1280020 | 0.820495 | 6.656855e-53 | -8.615850e-47 |
| Msa1086520 | Msa1287160 | 0.809876 | 1.523338e-50 | -8.615850e-47 |
| Msa1086520 | Msa1287340 | 0.801595 | 8.362240e-49 | -8.615850e-47 |
| Msa1086520 | Msa1298740 | 0.814558 | 1.449228e-51 | -8.615850e-47 |
| Msa1086520 | Msa1319520 | 0.800056 | 1.723995e-48 | -8.615850e-47 |
| Msa1086520 | Msa1327820 | 0.805151 | 1.533013e-49 | -8.615850e-47 |
| Msa1086520 | Msa1332180 | 0.834138 | 3.564202e-56 | -8.615850e-47 |
| Msa1086520 | Msa1336350 | 0.802051 | 6.740459e-49 | -8.615850e-47 |
| Msa1086520 | Msa1343540 | 0.807334 | 5.318271e-50 | -8.615850e-47 |
| Msa1086520 | Msa1354850 | 0.956168 | 5.561760e-114 | -8.615850e-47 |
| Msa1086520 | Msa1354890 | 0.809618 | 1.730971e-50 | -8.615850e-47 |
| Msa1086520 | Msa1355020 | 0.954533 | 2.389621e-112 | -8.615850e-47 |
| Msa1086520 | Msa1355060 | 0.824418 | 8.159208e-54 | -8.615850e-47 |
| Msa1086520 | Msa1355260 | 0.820555 | 6.448413e-53 | -8.615850e-47 |
| Msa1086520 | Msa1357380 | 0.800549 | 1.368113e-48 | -8.615850e-47 |
| Msa1086520 | Msa1361090 | 0.811972 | 5.358051e-51 | -8.615850e-47 |
| Msa1086520 | Msa1371250 | 0.842305 | 2.804851e-58 | -8.615850e-47 |
| Msa1086520 | Msa1373340 | 0.805635 | 1.213582e-49 | -8.615850e-47 |
| Msa1086520 | Msa1379370 | 0.820735 | 5.862018e-53 | -8.615850e-47 |
| Msa1086520 | Msa1380540 | 0.929723 | 4.611930e-93 | -8.615850e-47 |
| Msa1086520 | Msa1380600 | 0.804542 | 2.055399e-49 | -8.615850e-47 |
| Msa1086520 | Msa1384980 | 0.802078 | 6.652583e-49 | -8.615850e-47 |
| Msa1086520 | Msa1385450 | 0.844501 | 7.272457e-59 | -8.615850e-47 |
| Msa1086520 | Msa1385940 | 0.849076 | 4.079241e-60 | -8.615850e-47 |
| Msa1086520 | Msa1387090 | 0.842095 | 3.188198e-58 | -8.615850e-47 |
| Msa1086520 | Msa1388230 | 0.802721 | 4.904900e-49 | -8.615850e-47 |
| Msa1086520 | Msa1389990 | 0.805708 | 1.171777e-49 | -8.615850e-47 |
| Msa1086520 | Msa1390410 | 0.863340 | 2.668703e-64 | -8.615850e-47 |
| Msa1086520 | Msa1393600 | 0.842066 | 3.244903e-58 | -8.615850e-47 |
| Msa1086520 | Msa1394090 | 0.954949 | 9.297214e-113 | -8.615850e-47 |
| Msa1086520 | Msa1394100 | 0.956981 | 8.137666e-115 | -8.615850e-47 |
| Msa1086520 | Msa1394170 | 0.835913 | 1.272261e-56 | -8.615850e-47 |
| Msa1086520 | Msa1394280 | 0.945795 | 1.560963e-104 | -8.615850e-47 |
| Msa1086520 | Msa1400600 | 0.846457 | 2.145690e-59 | -8.615850e-47 |
| Msa1086520 | Msa1405190 | 0.823324 | 1.472530e-53 | -8.615850e-47 |
| Msa1086520 | Msa1408190 | 0.804298 | 2.310522e-49 | -8.615850e-47 |
| Msa1086520 | Msa1413220 | 0.800381 | 1.480045e-48 | -8.615850e-47 |
| Msa1086520 | Msa1414560 | 0.816398 | 5.644541e-52 | -8.615850e-47 |
| Msa1086520 | Msa1415120 | 0.876678 | 1.153910e-68 | -8.615850e-47 |
| Msa1086520 | Msa1428440 | 0.828186 | 1.034185e-54 | -8.615850e-47 |
| Msa1086520 | Msa1432350 | 0.806156 | 9.433616e-50 | -8.615850e-47 |
| Msa1086520 | Msa1433650 | 0.830701 | 2.532167e-55 | -8.615850e-47 |
| Msa1086520 | Msa1438420 | 0.808365 | 3.209590e-50 | -8.615850e-47 |
| Msa1086520 | Msa1439160 | 0.844854 | 5.841545e-59 | -8.615850e-47 |
| Msa1086520 | Msa1448990 | 0.804750 | 1.859449e-49 | -8.615850e-47 |
| Msa1086520 | Msa1450420 | 0.818955 | 1.496016e-52 | -8.615850e-47 |
| Msa1086520 | Msa1451780 | 0.807097 | 5.968478e-50 | -8.615850e-47 |
| Msa1086520 | Msa1454940 | 0.824481 | 7.884853e-54 | -8.615850e-47 |
| Msa1086520 | Msa1465410 | 0.828296 | 9.728631e-55 | -8.615850e-47 |
| Msa1086520 | Msa1466170 | 0.832621 | 8.512853e-56 | -8.615850e-47 |
| Msa0240290 | Msa1086520 | 0.839511 | 1.516953e-57 | -8.615850e-47 |
| Msa0256170 | Msa1086520 | 0.832575 | 8.744366e-56 | -8.615850e-47 |
| Msa0268180 | Msa1086520 | 0.849565 | 2.979670e-60 | -8.615850e-47 |
| Msa0268220 | Msa1086520 | 0.961178 | 2.111292e-119 | -8.615850e-47 |
| Msa0268340 | Msa1086520 | 0.952076 | 5.266428e-110 | -8.615850e-47 |
| Msa0268380 | Msa1086520 | 0.809392 | 1.936054e-50 | -8.615850e-47 |
| Msa0268420 | Msa1086520 | 0.859916 | 2.970861e-63 | -8.615850e-47 |
| Msa0268460 | Msa1086520 | 0.966818 | 1.973038e-126 | -8.615850e-47 |
| Msa0268500 | Msa1086520 | 0.961227 | 1.853728e-119 | -8.615850e-47 |
| Msa0268540 | Msa1086520 | 0.839638 | 1.405405e-57 | -8.615850e-47 |
| Msa0268650 | Msa1086520 | 0.855844 | 4.801810e-62 | -8.615850e-47 |
| Msa0268680 | Msa1086520 | 0.937155 | 5.479427e-98 | -8.615850e-47 |
| Msa0268690 | Msa1086520 | 0.901186 | 3.455940e-78 | -8.615850e-47 |
| Msa0268730 | Msa1086520 | 0.804825 | 1.794018e-49 | -8.615850e-47 |
| Msa0268760 | Msa1086520 | 0.841484 | 4.622250e-58 | -8.615850e-47 |
| Msa0268850 | Msa1086520 | 0.846845 | 1.681506e-59 | -8.615850e-47 |
| Msa0268890 | Msa1086520 | 0.816124 | 6.500408e-52 | -8.615850e-47 |
| Msa0268900 | Msa1086520 | 0.947117 | 1.252986e-105 | -8.615850e-47 |
| Msa0268930 | Msa1086520 | 0.825584 | 4.327835e-54 | -8.615850e-47 |
| Msa0269060 | Msa1086520 | 0.848350 | 6.481373e-60 | -8.615850e-47 |
| Msa0269100 | Msa1086520 | 0.969305 | 6.300961e-130 | -8.615850e-47 |
| Msa0278080 | Msa1086520 | 0.816654 | 4.947530e-52 | -8.615850e-47 |
| Msa0282880 | Msa1086520 | 0.812773 | 3.581064e-51 | -8.615850e-47 |
| Msa0288270 | Msa1086520 | 0.807355 | 5.264259e-50 | -8.615850e-47 |
| Msa0288280 | Msa1086520 | 0.807267 | 5.493866e-50 | -8.615850e-47 |
| Msa0306130 | Msa1086520 | 0.835029 | 2.128466e-56 | -8.615850e-47 |
| Msa0309160 | Msa1086520 | 0.863603 | 2.213368e-64 | -8.615850e-47 |
| Msa0314980 | Msa1086520 | 0.808615 | 2.839025e-50 | -8.615850e-47 |
| Msa0317630 | Msa1086520 | 0.819027 | 1.440451e-52 | -8.615850e-47 |
| Msa0321180 | Msa1086520 | 0.807299 | 5.409554e-50 | -8.615850e-47 |
| Msa0321200 | Msa1086520 | 0.810766 | 9.789814e-51 | -8.615850e-47 |
| Msa0324060 | Msa1086520 | 0.817743 | 2.814976e-52 | -8.615850e-47 |
| Msa0324430 | Msa1086520 | 0.802494 | 5.463613e-49 | -8.615850e-47 |
| Msa0330270 | Msa1086520 | 0.811316 | 7.442321e-51 | -8.615850e-47 |
| Msa0338900 | Msa1086520 | 0.842641 | 2.284784e-58 | -8.615850e-47 |
| Msa0344180 | Msa1086520 | 0.808905 | 2.461525e-50 | -8.615850e-47 |
| Msa0344200 | Msa1086520 | 0.810184 | 1.307625e-50 | -8.615850e-47 |
| Msa0344240 | Msa1086520 | 0.903011 | 5.388147e-79 | -8.615850e-47 |
| Msa0344250 | Msa1086520 | 0.934946 | 1.832841e-96 | -8.615850e-47 |
| Msa0509510 | Msa1086520 | 0.825761 | 3.929952e-54 | -8.615850e-47 |
| Msa0513500 | Msa1086520 | 0.801841 | 7.444416e-49 | -8.615850e-47 |
| Msa0515680 | Msa1086520 | 0.805270 | 1.447559e-49 | -8.615850e-47 |
| Msa0515830 | Msa1086520 | 0.800669 | 1.293227e-48 | -8.615850e-47 |
| Msa0528170 | Msa1086520 | 0.806972 | 6.344139e-50 | -8.615850e-47 |
| Msa0539900 | Msa1086520 | 0.803830 | 2.890729e-49 | -8.615850e-47 |
| Msa0551520 | Msa1086520 | 0.816495 | 5.371192e-52 | -8.615850e-47 |
| Msa0558220 | Msa1086520 | 0.800069 | 1.713064e-48 | -8.615850e-47 |
| Msa0558890 | Msa1086520 | 0.813805 | 2.125117e-51 | -8.615850e-47 |
| Msa0564000 | Msa1086520 | 0.817141 | 3.845280e-52 | -8.615850e-47 |
| Msa0568490 | Msa1086520 | 0.818314 | 2.091549e-52 | -8.615850e-47 |
| Msa0568810 | Msa1086520 | 0.809731 | 1.636562e-50 | -8.615850e-47 |
| Msa0571220 | Msa1086520 | 0.804255 | 2.357953e-49 | -8.615850e-47 |
| Msa0582530 | Msa1086520 | 0.805050 | 1.609553e-49 | -8.615850e-47 |
| Msa0582570 | Msa1086520 | 0.947833 | 3.109608e-106 | -8.615850e-47 |
| Msa0582580 | Msa1086520 | 0.949722 | 7.149662e-108 | -8.615850e-47 |
| Msa0582620 | Msa1086520 | 0.822792 | 1.959483e-53 | -8.615850e-47 |
| Msa0582710 | Msa1086520 | 0.824595 | 7.413272e-54 | -8.615850e-47 |
| Msa0582740 | Msa1086520 | 0.829757 | 4.305554e-55 | -8.615850e-47 |
| Msa0582830 | Msa1086520 | 0.827756 | 1.312062e-54 | -8.615850e-47 |
| Msa0582900 | Msa1086520 | 0.804519 | 2.077600e-49 | -8.615850e-47 |
| Msa0587060 | Msa1086520 | 0.827212 | 1.771912e-54 | -8.615850e-47 |
| Msa0591290 | Msa1086520 | 0.816175 | 6.331576e-52 | -8.615850e-47 |
| Msa0591370 | Msa1086520 | 0.836701 | 8.019580e-57 | -8.615850e-47 |
| Msa0595240 | Msa1086520 | 0.829957 | 3.849058e-55 | -8.615850e-47 |
| Msa0855490 | Msa1086520 | 0.814355 | 1.607146e-51 | -8.615850e-47 |
| Msa0860270 | Msa1086520 | 0.837306 | 5.618449e-57 | -8.615850e-47 |
| Msa0924820 | Msa1086520 | 0.936237 | 2.394294e-97 | -8.615850e-47 |
| Msa0924890 | Msa1086520 | 0.840879 | 6.664775e-58 | -8.615850e-47 |
| Msa0924970 | Msa1086520 | 0.925187 | 2.574863e-90 | -8.615850e-47 |
| Msa0925020 | Msa1086520 | 0.950995 | 5.173613e-109 | -8.615850e-47 |
| Msa0930990 | Msa1086520 | 0.914535 | 1.711005e-84 | -8.615850e-47 |
| Msa0931090 | Msa1086520 | 0.834977 | 2.192986e-56 | -8.615850e-47 |
| Msa0931150 | Msa1086520 | 0.830482 | 2.864194e-55 | -8.615850e-47 |
| Msa0931280 | Msa1086520 | 0.857375 | 1.704188e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086520 | MtrunA17_Chr6g0466591 | 83.929 | 112 | 10 | 2 | 112 | 215 | 1 | 112 | 1.81e-51 | 162 |
| Msa1086520 | MtrunA17_Chr4g0016891 | 87.500 | 96 | 9 | 2 | 112 | 204 | 1 | 96 | 3.36e-47 | 150 |
| Msa1086520 | MtrunA17_Chr4g0015801 | 93.827 | 81 | 3 | 1 | 112 | 190 | 1 | 81 | 1.96e-44 | 144 |
| Msa1086520 | MtrunA17_CPg0492771 | 93.827 | 81 | 3 | 1 | 112 | 190 | 1 | 81 | 1.96e-44 | 144 |
| Msa1086520 | MtrunA17_Chr7g0237831 | 94.667 | 75 | 2 | 1 | 112 | 184 | 1 | 75 | 1.47e-40 | 133 |
| Msa1086520 | MtrunA17_CPg0492781 | 98.182 | 55 | 1 | 0 | 46 | 100 | 7 | 61 | 8.08e-35 | 118 |
| Msa1086520 | MtrunA17_Chr4g0015791 | 98.182 | 55 | 1 | 0 | 46 | 100 | 7 | 61 | 8.08e-35 | 118 |
| Msa1086520 | MtrunA17_Chr8g0355601 | 96.364 | 55 | 2 | 0 | 46 | 100 | 7 | 61 | 3.85e-34 | 116 |
| Msa1086520 | MtrunA17_Chr6g0465781 | 96.610 | 59 | 2 | 0 | 112 | 170 | 1 | 59 | 6.95e-33 | 113 |
| Msa1086520 | MtrunA17_Chr7g0224991 | 97.368 | 38 | 1 | 0 | 62 | 99 | 6 | 43 | 1.28e-21 | 84.0 |
| Msa1086520 | MtrunA17_CPg0492791 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.79e-14 | 65.1 |
| Msa1086520 | MtrunA17_Chr4g0015781 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.79e-14 | 65.1 |
| Msa1086520 | MtrunA17_Chr4g0028951 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.79e-14 | 65.1 |
| Msa1086520 | MtrunA17_Chr8g0355611 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.79e-14 | 65.1 |
| Msa1086520 | MtrunA17_Chr4g0016881 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 7.04e-14 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086520 | ATCG00650.1 | 83.750 | 80 | 13 | 0 | 112 | 191 | 1 | 80 | 3.07e-40 | 133 |
| Msa1086520 | ATCG00640.1 | 74.545 | 55 | 14 | 0 | 46 | 100 | 7 | 61 | 2.47e-26 | 97.1 |
| Msa1086520 | ATCG00630.1 | 84.375 | 32 | 5 | 0 | 15 | 46 | 1 | 32 | 6.68e-12 | 58.9 |
Find 21 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACGAATAACTGTTATTT+TGG | 0.125276 | 7_2:+87426373 | Msa1086520:CDS |
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | 7_2:+87426417 | Msa1086520:CDS |
| AATCGTATGTTTGCAACAAA+AGG | 0.396841 | 7_2:-87426513 | None:intergenic |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | 7_2:+87425746 | Msa1086520:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | 7_2:+87426418 | Msa1086520:CDS |
| AGTTTGTCCCCGATCCAATC+GGG | 0.455483 | 7_2:+87426808 | Msa1086520:CDS |
| GAGTTTGTCCCCGATCCAAT+CGG | 0.465376 | 7_2:+87426807 | Msa1086520:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | 7_2:+87425763 | Msa1086520:CDS |
| AAAGGTGACGAATTAACAAA+AGG | 0.521079 | 7_2:-87426982 | None:intergenic |
| ACACAATACACCTAGTCGAT+TGG | 0.524208 | 7_2:+87426472 | Msa1086520:CDS |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | 7_2:+87425753 | Msa1086520:CDS |
| ATCGTATGTTTGCAACAAAA+GGG | 0.538893 | 7_2:-87426512 | None:intergenic |
| TTTCTCAATTCCAATCGACT+AGG | 0.574270 | 7_2:-87426482 | None:intergenic |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | 7_2:+87425732 | Msa1086520:CDS |
| GAGTCGCTTAGATTTATCCA+TGG | 0.585856 | 7_2:-87426755 | None:intergenic |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | 7_2:-87425748 | None:intergenic |
| GTATAGGAATAAACAAACCA+TGG | 0.629025 | 7_2:+87426738 | Msa1086520:CDS |
| TATCGACTTATTAGTCAACA+AGG | 0.637963 | 7_2:+87426865 | Msa1086520:CDS |
| GTTTGTCCCCGATCCAATCG+GGG | 0.647747 | 7_2:+87426809 | Msa1086520:CDS |
| TTTGTCCCCGATCCAATCGG+GGG | 0.661952 | 7_2:+87426810 | Msa1086520:CDS |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | 7_2:+87426419 | Msa1086520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACTAGAATCAAAAAAA+GGG | - | chr7_2:87425835-87425854 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | + | chr7_2:87425959-87425978 | Msa1086520:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | - | chr7_2:87426053-87426072 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | + | chr7_2:87426209-87426228 | Msa1086520:intron | 15.0% |
| !!! | AATCCTTTTTTTATAAGAAA+TGG | + | chr7_2:87426707-87426726 | Msa1086520:intron | 15.0% |
| !!! | ATCCTTTTTTTATAAGAAAT+GGG | + | chr7_2:87426708-87426727 | Msa1086520:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | - | chr7_2:87427003-87427022 | None:intergenic | 15.0% |
| !! | AATAACTAGAATCAAAAAAA+GGG | - | chr7_2:87425835-87425854 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | + | chr7_2:87425959-87425978 | Msa1086520:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | - | chr7_2:87426053-87426072 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | + | chr7_2:87426209-87426228 | Msa1086520:intron | 15.0% |
| !!! | AATCCTTTTTTTATAAGAAA+TGG | + | chr7_2:87426707-87426726 | Msa1086520:intron | 15.0% |
| !!! | ATCCTTTTTTTATAAGAAAT+GGG | + | chr7_2:87426708-87426727 | Msa1086520:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | - | chr7_2:87427003-87427022 | None:intergenic | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | - | chr7_2:87425683-87425702 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | + | chr7_2:87425682-87425701 | Msa1086520:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | - | chr7_2:87425834-87425853 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | - | chr7_2:87425836-87425855 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | + | chr7_2:87425834-87425853 | Msa1086520:intron | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | - | chr7_2:87425889-87425908 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | + | chr7_2:87425962-87425981 | Msa1086520:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | + | chr7_2:87425968-87425987 | Msa1086520:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | - | chr7_2:87426084-87426103 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | + | chr7_2:87426373-87426392 | Msa1086520:CDS | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | + | chr7_2:87426409-87426428 | Msa1086520:CDS | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | + | chr7_2:87426543-87426562 | Msa1086520:intron | 20.0% |
| !! | ATCCCATTTCTTATAAAAAA+AGG | - | chr7_2:87426713-87426732 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | + | chr7_2:87426716-87426735 | Msa1086520:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | - | chr7_2:87426923-87426942 | None:intergenic | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | - | chr7_2:87425683-87425702 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | + | chr7_2:87425682-87425701 | Msa1086520:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | - | chr7_2:87425834-87425853 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | - | chr7_2:87425836-87425855 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | + | chr7_2:87425834-87425853 | Msa1086520:intron | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | - | chr7_2:87425889-87425908 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | + | chr7_2:87425962-87425981 | Msa1086520:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | + | chr7_2:87425968-87425987 | Msa1086520:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | - | chr7_2:87426084-87426103 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | + | chr7_2:87426373-87426392 | Msa1086520:CDS | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | + | chr7_2:87426409-87426428 | Msa1086520:CDS | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | + | chr7_2:87426543-87426562 | Msa1086520:intron | 20.0% |
| !! | ATCCCATTTCTTATAAAAAA+AGG | - | chr7_2:87426713-87426732 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | + | chr7_2:87426716-87426735 | Msa1086520:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | - | chr7_2:87426923-87426942 | None:intergenic | 20.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | - | chr7_2:87425906-87425925 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | - | chr7_2:87425907-87425926 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | + | chr7_2:87426088-87426107 | Msa1086520:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | + | chr7_2:87426089-87426108 | Msa1086520:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | + | chr7_2:87426327-87426346 | Msa1086520:intron | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | - | chr7_2:87426584-87426603 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | - | chr7_2:87426585-87426604 | None:intergenic | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | - | chr7_2:87425906-87425925 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | - | chr7_2:87425907-87425926 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | + | chr7_2:87426088-87426107 | Msa1086520:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | + | chr7_2:87426089-87426108 | Msa1086520:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | + | chr7_2:87426327-87426346 | Msa1086520:intron | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | - | chr7_2:87426584-87426603 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | - | chr7_2:87426585-87426604 | None:intergenic | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | + | chr7_2:87425685-87425704 | Msa1086520:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | + | chr7_2:87425723-87425742 | Msa1086520:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | + | chr7_2:87425795-87425814 | Msa1086520:intron | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | + | chr7_2:87425839-87425858 | Msa1086520:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | - | chr7_2:87425994-87426013 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | + | chr7_2:87426068-87426087 | Msa1086520:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | + | chr7_2:87426092-87426111 | Msa1086520:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | + | chr7_2:87426330-87426349 | Msa1086520:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | - | chr7_2:87426363-87426382 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | + | chr7_2:87426417-87426436 | Msa1086520:CDS | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | + | chr7_2:87426418-87426437 | Msa1086520:CDS | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | + | chr7_2:87426419-87426438 | Msa1086520:CDS | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | - | chr7_2:87426515-87426534 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | - | chr7_2:87426516-87426535 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | + | chr7_2:87426738-87426757 | Msa1086520:CDS | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | + | chr7_2:87426785-87426804 | Msa1086520:CDS | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | + | chr7_2:87426865-87426884 | Msa1086520:CDS | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | - | chr7_2:87426985-87427004 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | + | chr7_2:87425685-87425704 | Msa1086520:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | + | chr7_2:87425723-87425742 | Msa1086520:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | + | chr7_2:87425795-87425814 | Msa1086520:intron | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | + | chr7_2:87425839-87425858 | Msa1086520:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | - | chr7_2:87425994-87426013 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | + | chr7_2:87426068-87426087 | Msa1086520:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | + | chr7_2:87426092-87426111 | Msa1086520:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | + | chr7_2:87426330-87426349 | Msa1086520:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | - | chr7_2:87426363-87426382 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | + | chr7_2:87426417-87426436 | Msa1086520:CDS | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | + | chr7_2:87426418-87426437 | Msa1086520:CDS | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | + | chr7_2:87426419-87426438 | Msa1086520:CDS | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | - | chr7_2:87426515-87426534 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | - | chr7_2:87426516-87426535 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | + | chr7_2:87426738-87426757 | Msa1086520:CDS | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | + | chr7_2:87426785-87426804 | Msa1086520:CDS | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | + | chr7_2:87426865-87426884 | Msa1086520:CDS | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | - | chr7_2:87426985-87427004 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | + | chr7_2:87425997-87426016 | Msa1086520:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | - | chr7_2:87426017-87426036 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | - | chr7_2:87426018-87426037 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | + | chr7_2:87426093-87426112 | Msa1086520:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | - | chr7_2:87426288-87426307 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | + | chr7_2:87426337-87426356 | Msa1086520:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | - | chr7_2:87426485-87426504 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | + | chr7_2:87426722-87426741 | Msa1086520:intron | 35.0% |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | + | chr7_2:87425997-87426016 | Msa1086520:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | - | chr7_2:87426017-87426036 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | - | chr7_2:87426018-87426037 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | + | chr7_2:87426093-87426112 | Msa1086520:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | - | chr7_2:87426288-87426307 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | + | chr7_2:87426337-87426356 | Msa1086520:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | - | chr7_2:87426485-87426504 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | + | chr7_2:87426722-87426741 | Msa1086520:intron | 35.0% |
| GATTTGGCCTCAGTGAAATT+AGG | + | chr7_2:87425984-87426003 | Msa1086520:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | + | chr7_2:87426006-87426025 | Msa1086520:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | + | chr7_2:87426472-87426491 | Msa1086520:CDS | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | + | chr7_2:87426566-87426585 | Msa1086520:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | - | chr7_2:87426758-87426777 | None:intergenic | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | + | chr7_2:87425984-87426003 | Msa1086520:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | + | chr7_2:87426006-87426025 | Msa1086520:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | + | chr7_2:87426472-87426491 | Msa1086520:CDS | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | + | chr7_2:87426566-87426585 | Msa1086520:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | - | chr7_2:87426758-87426777 | None:intergenic | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | - | chr7_2:87425751-87425770 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | - | chr7_2:87425817-87425836 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | + | chr7_2:87425844-87425863 | Msa1086520:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | + | chr7_2:87425845-87425864 | Msa1086520:intron | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | - | chr7_2:87426825-87426844 | None:intergenic | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | - | chr7_2:87425751-87425770 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | - | chr7_2:87425817-87425836 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | + | chr7_2:87425844-87425863 | Msa1086520:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | + | chr7_2:87425845-87425864 | Msa1086520:intron | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | - | chr7_2:87426825-87426844 | None:intergenic | 45.0% | |
| !!! | ATATTTATATTTGTTATATA+AGG | - | chr7_2:87426657-87426676 | None:intergenic | 5.0% |
| !!! | ATATTTATATTTGTTATATA+AGG | - | chr7_2:87426657-87426676 | None:intergenic | 5.0% |
| ATATCTCTCTGTGGCACCAG+TGG | + | chr7_2:87425732-87425751 | Msa1086520:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | + | chr7_2:87425746-87425765 | Msa1086520:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | + | chr7_2:87425753-87425772 | Msa1086520:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | - | chr7_2:87425816-87425835 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | + | chr7_2:87425846-87425865 | Msa1086520:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | + | chr7_2:87426344-87426363 | Msa1086520:intron | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | + | chr7_2:87426569-87426588 | Msa1086520:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | + | chr7_2:87426807-87426826 | Msa1086520:CDS | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | + | chr7_2:87426808-87426827 | Msa1086520:CDS | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | - | chr7_2:87426820-87426839 | None:intergenic | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | + | chr7_2:87425732-87425751 | Msa1086520:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | + | chr7_2:87425746-87425765 | Msa1086520:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | + | chr7_2:87425753-87425772 | Msa1086520:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | - | chr7_2:87425816-87425835 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | + | chr7_2:87425846-87425865 | Msa1086520:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | + | chr7_2:87426344-87426363 | Msa1086520:intron | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | + | chr7_2:87426569-87426588 | Msa1086520:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | + | chr7_2:87426807-87426826 | Msa1086520:CDS | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | + | chr7_2:87426808-87426827 | Msa1086520:CDS | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | - | chr7_2:87426820-87426839 | None:intergenic | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | + | chr7_2:87425763-87425782 | Msa1086520:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | - | chr7_2:87426346-87426365 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | + | chr7_2:87426343-87426362 | Msa1086520:intron | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | + | chr7_2:87426809-87426828 | Msa1086520:CDS | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | + | chr7_2:87426810-87426829 | Msa1086520:CDS | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | - | chr7_2:87426819-87426838 | None:intergenic | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | + | chr7_2:87425763-87425782 | Msa1086520:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | - | chr7_2:87426346-87426365 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | + | chr7_2:87426343-87426362 | Msa1086520:intron | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | + | chr7_2:87426809-87426828 | Msa1086520:CDS | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | + | chr7_2:87426810-87426829 | Msa1086520:CDS | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | - | chr7_2:87426819-87426838 | None:intergenic | 55.0% | |
| TCGATCCCCCGATTGGATCG+GGG | - | chr7_2:87426818-87426837 | None:intergenic | 60.0% | |
| TCGATCCCCCGATTGGATCG+GGG | - | chr7_2:87426818-87426837 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87425673 | 87427071 | 87425673 | ID=Msa1086520;Name=Msa1086520 |
| chr7_2 | mRNA | 87425673 | 87427071 | 87425673 | ID=Msa1086520-mRNA-1;Parent=Msa1086520;Name=Msa1086520-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|0|0|3|0|215 |
| chr7_2 | exon | 87425673 | 87425805 | 87425673 | ID=Msa1086520-mRNA-1:exon:23824;Parent=Msa1086520-mRNA-1 |
| chr7_2 | exon | 87426372 | 87426538 | 87426372 | ID=Msa1086520-mRNA-1:exon:23825;Parent=Msa1086520-mRNA-1 |
| chr7_2 | exon | 87426724 | 87427071 | 87426724 | ID=Msa1086520-mRNA-1:exon:23826;Parent=Msa1086520-mRNA-1 |
| chr7_2 | CDS | 87425673 | 87425805 | 87425673 | ID=Msa1086520-mRNA-1:cds;Parent=Msa1086520-mRNA-1 |
| chr7_2 | CDS | 87426372 | 87426538 | 87426372 | ID=Msa1086520-mRNA-1:cds;Parent=Msa1086520-mRNA-1 |
| chr7_2 | CDS | 87426724 | 87427071 | 87426724 | ID=Msa1086520-mRNA-1:cds;Parent=Msa1086520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
