AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0269100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269100 MtrunA17_Chr4g0015801 81.301 123 10 3 68 177 1 123 5.46e-50 157
Msa0269100 MtrunA17_CPg0492771 81.301 123 10 3 68 177 1 123 5.46e-50 157
Msa0269100 MtrunA17_Chr6g0466591 88.889 90 6 1 68 153 1 90 1.93e-48 153
Msa0269100 MtrunA17_Chr4g0016891 86.957 92 8 2 68 155 1 92 4.39e-45 144
Msa0269100 MtrunA17_Chr7g0237831 94.667 75 2 1 68 140 1 75 5.92e-41 132
Msa0269100 MtrunA17_Chr6g0465781 96.610 59 2 0 68 126 1 59 1.31e-33 113
Msa0269100 MtrunA17_CPg0492791 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa0269100 MtrunA17_Chr4g0015781 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa0269100 MtrunA17_Chr4g0028951 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa0269100 MtrunA17_Chr8g0355611 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa0269100 MtrunA17_Chr4g0016881 100.000 30 0 0 15 44 1 30 5.50e-14 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269100 ATCG00650.1 70.909 110 23 2 68 177 1 101 8.00e-44 141
Msa0269100 ATCG00630.1 90.000 30 3 0 15 44 1 30 1.53e-11 57.0

Find 16 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGTGTTAATAAGGAATCT+AGG 0.329597 2_2:+70506401 Msa0269100:CDS
CACCAGTGGCAAGTACTCTA+TGG 0.426592 2_2:+70505730 Msa0269100:CDS
GAGTGTTAATAAGGAATCTA+GGG 0.452009 2_2:+70506402 Msa0269100:CDS
AGTTTGTCCCCGATCCAATC+GGG 0.455483 2_2:+70506797 Msa0269100:CDS
GAGTTTGTCCCCGATCCAAT+CGG 0.465376 2_2:+70506796 Msa0269100:CDS
CTATGGTTCGCGGTTCTAGC+AGG 0.487956 2_2:+70505747 Msa0269100:CDS
AAAGGTGACGAATTAACAAA+AGG 0.521079 2_2:-70506971 None:intergenic
GGCAAGTACTCTATGGTTCG+CGG 0.527936 2_2:+70505737 Msa0269100:CDS
ATATCTCTCTGTGGCACCAG+TGG 0.585814 2_2:+70505716 Msa0269100:CDS
GAGTCGCTTAGATTTATCCA+TGG 0.585856 2_2:-70506744 None:intergenic
AACCATAGAGTACTTGCCAC+TGG 0.586013 2_2:-70505732 None:intergenic
GTATAGGAATAAACAAACCA+TGG 0.629025 2_2:+70506727 Msa0269100:CDS
TATCGACTTATTAGTCAACA+AGG 0.637963 2_2:+70506854 Msa0269100:CDS
GTTTGTCCCCGATCCAATCG+GGG 0.647747 2_2:+70506798 Msa0269100:CDS
TTTGTCCCCGATCCAATCGG+GGG 0.661952 2_2:+70506799 Msa0269100:CDS
AGTGTTAATAAGGAATCTAG+GGG 0.667965 2_2:+70506403 Msa0269100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAGAATCAAAAAAA+GGG - chr2_2:70505819-70505838 None:intergenic 15.0%
!! AGAGCAAATTAATTTAATAA+AGG + chr2_2:70505943-70505962 Msa0269100:intron 15.0%
!! TATTATTAAATTCATAGCAA+TGG - chr2_2:70506037-70506056 None:intergenic 15.0%
!! CTGTACTATATAAAATTAAT+TGG + chr2_2:70506193-70506212 Msa0269100:intron 15.0%
!!! AATCCTTTTTTTATAAGAAA+TGG + chr2_2:70506696-70506715 Msa0269100:intron 15.0%
!!! ATCCTTTTTTTATAAGAAAT+GGG + chr2_2:70506697-70506716 Msa0269100:intron 15.0%
!!! TTTTTTTCATTATTCACAAA+AGG - chr2_2:70506992-70507011 None:intergenic 15.0%
!! AATAACTAGAATCAAAAAAA+GGG - chr2_2:70505819-70505838 None:intergenic 15.0%
!! AGAGCAAATTAATTTAATAA+AGG + chr2_2:70505943-70505962 Msa0269100:intron 15.0%
!! TATTATTAAATTCATAGCAA+TGG - chr2_2:70506037-70506056 None:intergenic 15.0%
!! CTGTACTATATAAAATTAAT+TGG + chr2_2:70506193-70506212 Msa0269100:intron 15.0%
!!! AATCCTTTTTTTATAAGAAA+TGG + chr2_2:70506696-70506715 Msa0269100:intron 15.0%
!!! ATCCTTTTTTTATAAGAAAT+GGG + chr2_2:70506697-70506716 Msa0269100:intron 15.0%
!!! TTTTTTTCATTATTCACAAA+AGG - chr2_2:70506992-70507011 None:intergenic 15.0%
!!! TTCGTTTTTTTCTTGTAATT+TGG - chr2_2:70505667-70505686 None:intergenic 20.0%
!! AAATTACAAGAAAAAAACGA+AGG + chr2_2:70505666-70505685 Msa0269100:CDS 20.0%
!! ATAACTAGAATCAAAAAAAG+GGG - chr2_2:70505818-70505837 None:intergenic 20.0%
!! CAATAACTAGAATCAAAAAA+AGG - chr2_2:70505820-70505839 None:intergenic 20.0%
!!! CTTTTTTTGATTCTAGTTAT+TGG + chr2_2:70505818-70505837 Msa0269100:intron 20.0%
!!! AGAGGGATTTAATATTTTAT+TGG - chr2_2:70505873-70505892 None:intergenic 20.0%
!! GCAAATTAATTTAATAAAGG+TGG + chr2_2:70505946-70505965 Msa0269100:intron 20.0%
!!! TAATTTAATAAAGGTGGATT+TGG + chr2_2:70505952-70505971 Msa0269100:intron 20.0%
!! TTCTATTACAATTCCATTTA+TGG - chr2_2:70506068-70506087 None:intergenic 20.0%
!!! TATACGAATAACTGTTATTT+TGG + chr2_2:70506357-70506376 Msa0269100:intron 20.0%
!!! TGATAAAAAGAGTGTTAATA+AGG + chr2_2:70506393-70506412 Msa0269100:CDS 20.0%
!! AGATAAAGAAATAGAGAAAA+TGG + chr2_2:70506527-70506546 Msa0269100:intron 20.0%
!! ATCCCATTTCTTATAAAAAA+AGG - chr2_2:70506702-70506721 None:intergenic 20.0%
!!! TTTATAAGAAATGGGATTTT+CGG + chr2_2:70506705-70506724 Msa0269100:intron 20.0%
!!! AATTAATCGTTGTTGTTTTA+AGG - chr2_2:70506912-70506931 None:intergenic 20.0%
!!! TTTTTTTTTAGAACAGTAGT+AGG - chr2_2:70507049-70507068 None:intergenic 20.0%
!!! TTCGTTTTTTTCTTGTAATT+TGG - chr2_2:70505667-70505686 None:intergenic 20.0%
!! AAATTACAAGAAAAAAACGA+AGG + chr2_2:70505666-70505685 Msa0269100:CDS 20.0%
!! ATAACTAGAATCAAAAAAAG+GGG - chr2_2:70505818-70505837 None:intergenic 20.0%
!! CAATAACTAGAATCAAAAAA+AGG - chr2_2:70505820-70505839 None:intergenic 20.0%
!!! CTTTTTTTGATTCTAGTTAT+TGG + chr2_2:70505818-70505837 Msa0269100:intron 20.0%
!!! AGAGGGATTTAATATTTTAT+TGG - chr2_2:70505873-70505892 None:intergenic 20.0%
!! GCAAATTAATTTAATAAAGG+TGG + chr2_2:70505946-70505965 Msa0269100:intron 20.0%
!!! TAATTTAATAAAGGTGGATT+TGG + chr2_2:70505952-70505971 Msa0269100:intron 20.0%
!! TTCTATTACAATTCCATTTA+TGG - chr2_2:70506068-70506087 None:intergenic 20.0%
!!! TATACGAATAACTGTTATTT+TGG + chr2_2:70506357-70506376 Msa0269100:intron 20.0%
!!! TGATAAAAAGAGTGTTAATA+AGG + chr2_2:70506393-70506412 Msa0269100:CDS 20.0%
!! AGATAAAGAAATAGAGAAAA+TGG + chr2_2:70506527-70506546 Msa0269100:intron 20.0%
!! ATCCCATTTCTTATAAAAAA+AGG - chr2_2:70506702-70506721 None:intergenic 20.0%
!!! TTTATAAGAAATGGGATTTT+CGG + chr2_2:70506705-70506724 Msa0269100:intron 20.0%
!!! AATTAATCGTTGTTGTTTTA+AGG - chr2_2:70506912-70506931 None:intergenic 20.0%
!!! TTTTTTTTTAGAACAGTAGT+AGG - chr2_2:70507049-70507068 None:intergenic 20.0%
! AAAAAAAAAACGAACGAAGA+GGG - chr2_2:70505890-70505909 None:intergenic 25.0%
! AAAAAAAAAAACGAACGAAG+AGG - chr2_2:70505891-70505910 None:intergenic 25.0%
! TGGAATTGTAATAGAATACT+TGG + chr2_2:70506072-70506091 Msa0269100:intron 25.0%
! GGAATTGTAATAGAATACTT+GGG + chr2_2:70506073-70506092 Msa0269100:intron 25.0%
! AGTGAATCAAAAAAAACCAA+AGG + chr2_2:70506311-70506330 Msa0269100:intron 25.0%
! TTATAGAATTTACCTCCTAA+GGG - chr2_2:70506568-70506587 None:intergenic 25.0%
! TTTATAGAATTTACCTCCTA+AGG - chr2_2:70506569-70506588 None:intergenic 25.0%
! AAAAAAAAAACGAACGAAGA+GGG - chr2_2:70505890-70505909 None:intergenic 25.0%
! AAAAAAAAAAACGAACGAAG+AGG - chr2_2:70505891-70505910 None:intergenic 25.0%
! TGGAATTGTAATAGAATACT+TGG + chr2_2:70506072-70506091 Msa0269100:intron 25.0%
! GGAATTGTAATAGAATACTT+GGG + chr2_2:70506073-70506092 Msa0269100:intron 25.0%
! AGTGAATCAAAAAAAACCAA+AGG + chr2_2:70506311-70506330 Msa0269100:intron 25.0%
! TTATAGAATTTACCTCCTAA+GGG - chr2_2:70506568-70506587 None:intergenic 25.0%
! TTTATAGAATTTACCTCCTA+AGG - chr2_2:70506569-70506588 None:intergenic 25.0%
TTACAAGAAAAAAACGAAGG+AGG + chr2_2:70505669-70505688 Msa0269100:CDS 30.0%
TCTAAAAACATATCTCTCTG+TGG + chr2_2:70505707-70505726 Msa0269100:CDS 30.0%
AGAAATCAATCGTTTATTCC+CGG + chr2_2:70505779-70505798 Msa0269100:intron 30.0%
! TTTGATTCTAGTTATTGGCA+CGG + chr2_2:70505823-70505842 Msa0269100:intron 30.0%
AAAAACTCCTAATTTCACTG+AGG - chr2_2:70505978-70505997 None:intergenic 30.0%
TAATAGAGTGAGACCATAAA+TGG + chr2_2:70506052-70506071 Msa0269100:intron 30.0%
ATTGTAATAGAATACTTGGG+CGG + chr2_2:70506076-70506095 Msa0269100:intron 30.0%
GAATCAAAAAAAACCAAAGG+AGG + chr2_2:70506314-70506333 Msa0269100:intron 30.0%
TATTCGTATATCTTTACCCT+TGG - chr2_2:70506347-70506366 None:intergenic 30.0%
! AGAGTGTTAATAAGGAATCT+AGG + chr2_2:70506401-70506420 Msa0269100:CDS 30.0%
GAGTGTTAATAAGGAATCTA+GGG + chr2_2:70506402-70506421 Msa0269100:CDS 30.0%
AGTGTTAATAAGGAATCTAG+GGG + chr2_2:70506403-70506422 Msa0269100:CDS 30.0%
ATCGTATGTTTGCAACAAAA+GGG - chr2_2:70506499-70506518 None:intergenic 30.0%
AATCGTATGTTTGCAACAAA+AGG - chr2_2:70506500-70506519 None:intergenic 30.0%
GTATAGGAATAAACAAACCA+TGG + chr2_2:70506727-70506746 Msa0269100:CDS 30.0%
! AATCTAAGCAATCTTTTCGT+AGG + chr2_2:70506774-70506793 Msa0269100:CDS 30.0%
!! TATCGACTTATTAGTCAACA+AGG + chr2_2:70506854-70506873 Msa0269100:CDS 30.0%
AAAGGTGACGAATTAACAAA+AGG - chr2_2:70506974-70506993 None:intergenic 30.0%
TTACAAGAAAAAAACGAAGG+AGG + chr2_2:70505669-70505688 Msa0269100:CDS 30.0%
TCTAAAAACATATCTCTCTG+TGG + chr2_2:70505707-70505726 Msa0269100:CDS 30.0%
AGAAATCAATCGTTTATTCC+CGG + chr2_2:70505779-70505798 Msa0269100:intron 30.0%
! TTTGATTCTAGTTATTGGCA+CGG + chr2_2:70505823-70505842 Msa0269100:intron 30.0%
AAAAACTCCTAATTTCACTG+AGG - chr2_2:70505978-70505997 None:intergenic 30.0%
TAATAGAGTGAGACCATAAA+TGG + chr2_2:70506052-70506071 Msa0269100:intron 30.0%
ATTGTAATAGAATACTTGGG+CGG + chr2_2:70506076-70506095 Msa0269100:intron 30.0%
GAATCAAAAAAAACCAAAGG+AGG + chr2_2:70506314-70506333 Msa0269100:intron 30.0%
TATTCGTATATCTTTACCCT+TGG - chr2_2:70506347-70506366 None:intergenic 30.0%
! AGAGTGTTAATAAGGAATCT+AGG + chr2_2:70506401-70506420 Msa0269100:CDS 30.0%
GAGTGTTAATAAGGAATCTA+GGG + chr2_2:70506402-70506421 Msa0269100:CDS 30.0%
AGTGTTAATAAGGAATCTAG+GGG + chr2_2:70506403-70506422 Msa0269100:CDS 30.0%
ATCGTATGTTTGCAACAAAA+GGG - chr2_2:70506499-70506518 None:intergenic 30.0%
AATCGTATGTTTGCAACAAA+AGG - chr2_2:70506500-70506519 None:intergenic 30.0%
GTATAGGAATAAACAAACCA+TGG + chr2_2:70506727-70506746 Msa0269100:CDS 30.0%
! AATCTAAGCAATCTTTTCGT+AGG + chr2_2:70506774-70506793 Msa0269100:CDS 30.0%
!! TATCGACTTATTAGTCAACA+AGG + chr2_2:70506854-70506873 Msa0269100:CDS 30.0%
AAAGGTGACGAATTAACAAA+AGG - chr2_2:70506974-70506993 None:intergenic 30.0%
! TGAAATTAGGAGTTTTTCCC+AGG + chr2_2:70505981-70506000 Msa0269100:intron 35.0%
CTTCAATTCCATTGAAACCT+GGG - chr2_2:70506001-70506020 None:intergenic 35.0%
ACTTCAATTCCATTGAAACC+TGG - chr2_2:70506002-70506021 None:intergenic 35.0%
TTGTAATAGAATACTTGGGC+GGG + chr2_2:70506077-70506096 Msa0269100:intron 35.0%
TTCGAAGCGAAGAAGAAAAA+AGG - chr2_2:70506272-70506291 None:intergenic 35.0%
AAAAAACCAAAGGAGGTTCA+TGG + chr2_2:70506321-70506340 Msa0269100:intron 35.0%
TTTCTCAATTCCAATCGACT+AGG - chr2_2:70506469-70506488 None:intergenic 35.0%
! AGAAATGGGATTTTCGGTAT+AGG + chr2_2:70506711-70506730 Msa0269100:intron 35.0%
! TGAAATTAGGAGTTTTTCCC+AGG + chr2_2:70505981-70506000 Msa0269100:intron 35.0%
CTTCAATTCCATTGAAACCT+GGG - chr2_2:70506001-70506020 None:intergenic 35.0%
ACTTCAATTCCATTGAAACC+TGG - chr2_2:70506002-70506021 None:intergenic 35.0%
TTGTAATAGAATACTTGGGC+GGG + chr2_2:70506077-70506096 Msa0269100:intron 35.0%
TTCGAAGCGAAGAAGAAAAA+AGG - chr2_2:70506272-70506291 None:intergenic 35.0%
AAAAAACCAAAGGAGGTTCA+TGG + chr2_2:70506321-70506340 Msa0269100:intron 35.0%
TTTCTCAATTCCAATCGACT+AGG - chr2_2:70506469-70506488 None:intergenic 35.0%
! AGAAATGGGATTTTCGGTAT+AGG + chr2_2:70506711-70506730 Msa0269100:intron 35.0%
GATTTGGCCTCAGTGAAATT+AGG + chr2_2:70505968-70505987 Msa0269100:intron 40.0%
! GAGTTTTTCCCAGGTTTCAA+TGG + chr2_2:70505990-70506009 Msa0269100:intron 40.0%
ACACAATACACCTAGTCGAT+TGG + chr2_2:70506456-70506475 Msa0269100:intron 40.0%
ATTGTTTGTGTGTCACCCTT+AGG + chr2_2:70506550-70506569 Msa0269100:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG - chr2_2:70506747-70506766 None:intergenic 40.0%
GATTTGGCCTCAGTGAAATT+AGG + chr2_2:70505968-70505987 Msa0269100:intron 40.0%
! GAGTTTTTCCCAGGTTTCAA+TGG + chr2_2:70505990-70506009 Msa0269100:intron 40.0%
ACACAATACACCTAGTCGAT+TGG + chr2_2:70506456-70506475 Msa0269100:intron 40.0%
ATTGTTTGTGTGTCACCCTT+AGG + chr2_2:70506550-70506569 Msa0269100:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG - chr2_2:70506747-70506766 None:intergenic 40.0%
! AACCATAGAGTACTTGCCAC+TGG - chr2_2:70505735-70505754 None:intergenic 45.0%
AAGGGGAATGTCAATGCATC+CGG - chr2_2:70505801-70505820 None:intergenic 45.0%
! TTCTAGTTATTGGCACGGCA+AGG + chr2_2:70505828-70505847 Msa0269100:intron 45.0%
TCTAGTTATTGGCACGGCAA+GGG + chr2_2:70505829-70505848 Msa0269100:intron 45.0%
AATCAATTCGATCCCCCGAT+TGG - chr2_2:70506814-70506833 None:intergenic 45.0%
! AACCATAGAGTACTTGCCAC+TGG - chr2_2:70505735-70505754 None:intergenic 45.0%
AAGGGGAATGTCAATGCATC+CGG - chr2_2:70505801-70505820 None:intergenic 45.0%
! TTCTAGTTATTGGCACGGCA+AGG + chr2_2:70505828-70505847 Msa0269100:intron 45.0%
TCTAGTTATTGGCACGGCAA+GGG + chr2_2:70505829-70505848 Msa0269100:intron 45.0%
AATCAATTCGATCCCCCGAT+TGG - chr2_2:70506814-70506833 None:intergenic 45.0%
!!! ATATTTATATTTGTTATATA+AGG - chr2_2:70506641-70506660 None:intergenic 5.0%
!!! ATATTTATATTTGTTATATA+AGG - chr2_2:70506641-70506660 None:intergenic 5.0%
ATATCTCTCTGTGGCACCAG+TGG + chr2_2:70505716-70505735 Msa0269100:CDS 50.0%
CACCAGTGGCAAGTACTCTA+TGG + chr2_2:70505730-70505749 Msa0269100:CDS 50.0%
GGCAAGTACTCTATGGTTCG+CGG + chr2_2:70505737-70505756 Msa0269100:CDS 50.0%
AGGGGAATGTCAATGCATCC+GGG - chr2_2:70505800-70505819 None:intergenic 50.0%
CTAGTTATTGGCACGGCAAG+GGG + chr2_2:70505830-70505849 Msa0269100:intron 50.0%
CAAAGGAGGTTCATGGCCAA+GGG + chr2_2:70506328-70506347 Msa0269100:intron 50.0%
GTTTGTGTGTCACCCTTAGG+AGG + chr2_2:70506553-70506572 Msa0269100:intron 50.0%
GAGTTTGTCCCCGATCCAAT+CGG + chr2_2:70506796-70506815 Msa0269100:CDS 50.0%
AGTTTGTCCCCGATCCAATC+GGG + chr2_2:70506797-70506816 Msa0269100:CDS 50.0%
ATTCGATCCCCCGATTGGAT+CGG - chr2_2:70506809-70506828 None:intergenic 50.0%
ATATCTCTCTGTGGCACCAG+TGG + chr2_2:70505716-70505735 Msa0269100:CDS 50.0%
CACCAGTGGCAAGTACTCTA+TGG + chr2_2:70505730-70505749 Msa0269100:CDS 50.0%
GGCAAGTACTCTATGGTTCG+CGG + chr2_2:70505737-70505756 Msa0269100:CDS 50.0%
AGGGGAATGTCAATGCATCC+GGG - chr2_2:70505800-70505819 None:intergenic 50.0%
CTAGTTATTGGCACGGCAAG+GGG + chr2_2:70505830-70505849 Msa0269100:intron 50.0%
CAAAGGAGGTTCATGGCCAA+GGG + chr2_2:70506328-70506347 Msa0269100:intron 50.0%
GTTTGTGTGTCACCCTTAGG+AGG + chr2_2:70506553-70506572 Msa0269100:intron 50.0%
GAGTTTGTCCCCGATCCAAT+CGG + chr2_2:70506796-70506815 Msa0269100:CDS 50.0%
AGTTTGTCCCCGATCCAATC+GGG + chr2_2:70506797-70506816 Msa0269100:CDS 50.0%
ATTCGATCCCCCGATTGGAT+CGG - chr2_2:70506809-70506828 None:intergenic 50.0%
! CTATGGTTCGCGGTTCTAGC+AGG + chr2_2:70505747-70505766 Msa0269100:CDS 55.0%
CCTTGGCCATGAACCTCCTT+TGG - chr2_2:70506330-70506349 None:intergenic 55.0%
CCAAAGGAGGTTCATGGCCA+AGG + chr2_2:70506327-70506346 Msa0269100:intron 55.0%
GTTTGTCCCCGATCCAATCG+GGG + chr2_2:70506798-70506817 Msa0269100:CDS 55.0%
TTTGTCCCCGATCCAATCGG+GGG + chr2_2:70506799-70506818 Msa0269100:CDS 55.0%
TTCGATCCCCCGATTGGATC+GGG - chr2_2:70506808-70506827 None:intergenic 55.0%
! CTATGGTTCGCGGTTCTAGC+AGG + chr2_2:70505747-70505766 Msa0269100:CDS 55.0%
CCTTGGCCATGAACCTCCTT+TGG - chr2_2:70506330-70506349 None:intergenic 55.0%
CCAAAGGAGGTTCATGGCCA+AGG + chr2_2:70506327-70506346 Msa0269100:intron 55.0%
GTTTGTCCCCGATCCAATCG+GGG + chr2_2:70506798-70506817 Msa0269100:CDS 55.0%
TTTGTCCCCGATCCAATCGG+GGG + chr2_2:70506799-70506818 Msa0269100:CDS 55.0%
TTCGATCCCCCGATTGGATC+GGG - chr2_2:70506808-70506827 None:intergenic 55.0%
TCGATCCCCCGATTGGATCG+GGG - chr2_2:70506807-70506826 None:intergenic 60.0%
TCGATCCCCCGATTGGATCG+GGG - chr2_2:70506807-70506826 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 70505657 70507078 70505657 ID=Msa0269100;Name=Msa0269100
chr2_2 mRNA 70505657 70507078 70505657 ID=Msa0269100-mRNA-1;Parent=Msa0269100;Name=Msa0269100-mRNA-1;_AED=0.31;_eAED=0.36;_QI=0|0|0|1|0|0|3|0|177
chr2_2 exon 70505657 70505789 70505657 ID=Msa0269100-mRNA-1:exon:22754;Parent=Msa0269100-mRNA-1
chr2_2 exon 70506390 70506424 70506390 ID=Msa0269100-mRNA-1:exon:22755;Parent=Msa0269100-mRNA-1
chr2_2 exon 70506713 70507078 70506713 ID=Msa0269100-mRNA-1:exon:22756;Parent=Msa0269100-mRNA-1
chr2_2 CDS 70505657 70505789 70505657 ID=Msa0269100-mRNA-1:cds;Parent=Msa0269100-mRNA-1
chr2_2 CDS 70506390 70506424 70506390 ID=Msa0269100-mRNA-1:cds;Parent=Msa0269100-mRNA-1
chr2_2 CDS 70506713 70507078 70506713 ID=Msa0269100-mRNA-1:cds;Parent=Msa0269100-mRNA-1
Gene Sequence

>Msa0269100

ATGTATTCCAAATTACAAGAAAAAAACGAAGGAGGATTTGAAATGCGAGATCTAAAAACATATCTCTCTGTGGCACCAGTGGCAAGTACTCTATGGTTCGCGGTTCTAGCAGGTCTCTTGATAGAAATCAATCTTGTGATAAAAAGAGTGTTAATAAGGAATCTAGGGAAATGGGATTTTCGGTATAGGAATAAACAAACCATGGATAAATCTAAGCGACTCTTTCTTAAATCTAAGCAATCTTTTCGTAGGAGTTTGTCCCCGATCCAATCGGGGGATCGAATTGATTATAAAAACATGAGTTTACTTTATCGACTTATTAGTCAACAAGGAAAAATATTATCTAGACGCGTGAATAGATCAACCTTAAAACAACAACGATTAATTACGATTGCTATAAAACAAGCTCGTATTTTATCTTTGTTACCTTTTGTTAATTCGTCACCTTTTGTGAATAATGAAAAAAAAAAATATGAAAAAAGCGAGTCGATCACTAGAACTCCTACTACTGTTCTAAAAAAAAACAAAAAATAG

Protein sequence

>Msa0269100

MYSKLQEKNEGGFEMRDLKTYLSVAPVASTLWFAVLAGLLIEINLVIKRVLIRNLGKWDFRYRNKQTMDKSKRLFLKSKQSFRRSLSPIQSGDRIDYKNMSLLYRLISQQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVNSSPFVNNEKKKYEKSESITRTPTTVLKKNKK*