AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1086690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1086690 MtrunA17_Chr4g0015801 81.301 123 10 3 68 177 1 123 5.46e-50 157
Msa1086690 MtrunA17_CPg0492771 81.301 123 10 3 68 177 1 123 5.46e-50 157
Msa1086690 MtrunA17_Chr6g0466591 88.889 90 6 1 68 153 1 90 1.93e-48 153
Msa1086690 MtrunA17_Chr4g0016891 86.957 92 8 2 68 155 1 92 4.39e-45 144
Msa1086690 MtrunA17_Chr7g0237831 94.667 75 2 1 68 140 1 75 5.92e-41 132
Msa1086690 MtrunA17_Chr6g0465781 96.610 59 2 0 68 126 1 59 1.31e-33 113
Msa1086690 MtrunA17_CPg0492791 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1086690 MtrunA17_Chr4g0015781 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1086690 MtrunA17_Chr4g0028951 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1086690 MtrunA17_Chr8g0355611 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1086690 MtrunA17_Chr4g0016881 100.000 30 0 0 15 44 1 30 5.50e-14 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1086690 ATCG00650.1 70.909 110 23 2 68 177 1 101 8.00e-44 141
Msa1086690 ATCG00630.1 90.000 30 3 0 15 44 1 30 1.53e-11 57.0

Find 16 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGTGTTAATAAGGAATCT+AGG 0.329597 7_2:+87513619 Msa1086690:CDS
CACCAGTGGCAAGTACTCTA+TGG 0.426592 7_2:+87512948 Msa1086690:CDS
GAGTGTTAATAAGGAATCTA+GGG 0.452009 7_2:+87513620 Msa1086690:CDS
AGTTTGTCCCCGATCCAATC+GGG 0.455483 7_2:+87514015 Msa1086690:CDS
GAGTTTGTCCCCGATCCAAT+CGG 0.465376 7_2:+87514014 Msa1086690:CDS
CTATGGTTCGCGGTTCTAGC+AGG 0.487956 7_2:+87512965 Msa1086690:CDS
AAAGGTGACGAATTAACAAA+AGG 0.521079 7_2:-87514189 None:intergenic
GGCAAGTACTCTATGGTTCG+CGG 0.527936 7_2:+87512955 Msa1086690:CDS
ATATCTCTCTGTGGCACCAG+TGG 0.585814 7_2:+87512934 Msa1086690:CDS
GAGTCGCTTAGATTTATCCA+TGG 0.585856 7_2:-87513962 None:intergenic
AACCATAGAGTACTTGCCAC+TGG 0.586013 7_2:-87512950 None:intergenic
GTATAGGAATAAACAAACCA+TGG 0.629025 7_2:+87513945 Msa1086690:CDS
TATCGACTTATTAGTCAACA+AGG 0.637963 7_2:+87514072 Msa1086690:CDS
GTTTGTCCCCGATCCAATCG+GGG 0.647747 7_2:+87514016 Msa1086690:CDS
TTTGTCCCCGATCCAATCGG+GGG 0.661952 7_2:+87514017 Msa1086690:CDS
AGTGTTAATAAGGAATCTAG+GGG 0.667965 7_2:+87513621 Msa1086690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAGAATCAAAAAAA+GGG - chr7_2:87513037-87513056 None:intergenic 15.0%
!! AGAGCAAATTAATTTAATAA+AGG + chr7_2:87513161-87513180 Msa1086690:intron 15.0%
!! TATTATTAAATTCATAGCAA+TGG - chr7_2:87513255-87513274 None:intergenic 15.0%
!! CTGTACTATATAAAATTAAT+TGG + chr7_2:87513411-87513430 Msa1086690:intron 15.0%
!!! AATCCTTTTTTTATAAGAAA+TGG + chr7_2:87513914-87513933 Msa1086690:intron 15.0%
!!! ATCCTTTTTTTATAAGAAAT+GGG + chr7_2:87513915-87513934 Msa1086690:intron 15.0%
!!! TTTTTTTCATTATTCACAAA+AGG - chr7_2:87514210-87514229 None:intergenic 15.0%
!! AATAACTAGAATCAAAAAAA+GGG - chr7_2:87513037-87513056 None:intergenic 15.0%
!! AGAGCAAATTAATTTAATAA+AGG + chr7_2:87513161-87513180 Msa1086690:intron 15.0%
!! TATTATTAAATTCATAGCAA+TGG - chr7_2:87513255-87513274 None:intergenic 15.0%
!! CTGTACTATATAAAATTAAT+TGG + chr7_2:87513411-87513430 Msa1086690:intron 15.0%
!!! AATCCTTTTTTTATAAGAAA+TGG + chr7_2:87513914-87513933 Msa1086690:intron 15.0%
!!! ATCCTTTTTTTATAAGAAAT+GGG + chr7_2:87513915-87513934 Msa1086690:intron 15.0%
!!! TTTTTTTCATTATTCACAAA+AGG - chr7_2:87514210-87514229 None:intergenic 15.0%
!!! TTCGTTTTTTTCTTGTAATT+TGG - chr7_2:87512885-87512904 None:intergenic 20.0%
!! AAATTACAAGAAAAAAACGA+AGG + chr7_2:87512884-87512903 Msa1086690:CDS 20.0%
!! ATAACTAGAATCAAAAAAAG+GGG - chr7_2:87513036-87513055 None:intergenic 20.0%
!! CAATAACTAGAATCAAAAAA+AGG - chr7_2:87513038-87513057 None:intergenic 20.0%
!!! CTTTTTTTGATTCTAGTTAT+TGG + chr7_2:87513036-87513055 Msa1086690:intron 20.0%
!!! AGAGGGATTTAATATTTTAT+TGG - chr7_2:87513091-87513110 None:intergenic 20.0%
!! GCAAATTAATTTAATAAAGG+TGG + chr7_2:87513164-87513183 Msa1086690:intron 20.0%
!!! TAATTTAATAAAGGTGGATT+TGG + chr7_2:87513170-87513189 Msa1086690:intron 20.0%
!! TTCTATTACAATTCCATTTA+TGG - chr7_2:87513286-87513305 None:intergenic 20.0%
!!! TATACGAATAACTGTTATTT+TGG + chr7_2:87513575-87513594 Msa1086690:intron 20.0%
!!! TGATAAAAAGAGTGTTAATA+AGG + chr7_2:87513611-87513630 Msa1086690:CDS 20.0%
!! AGATAAAGAAATAGAGAAAA+TGG + chr7_2:87513745-87513764 Msa1086690:intron 20.0%
!! ATCCCATTTCTTATAAAAAA+AGG - chr7_2:87513920-87513939 None:intergenic 20.0%
!!! TTTATAAGAAATGGGATTTT+CGG + chr7_2:87513923-87513942 Msa1086690:intron 20.0%
!!! AATTAATCGTTGTTGTTTTA+AGG - chr7_2:87514130-87514149 None:intergenic 20.0%
!!! TTTTTTTTTAGAACAGTAGT+AGG - chr7_2:87514267-87514286 None:intergenic 20.0%
!!! TTCGTTTTTTTCTTGTAATT+TGG - chr7_2:87512885-87512904 None:intergenic 20.0%
!! AAATTACAAGAAAAAAACGA+AGG + chr7_2:87512884-87512903 Msa1086690:CDS 20.0%
!! ATAACTAGAATCAAAAAAAG+GGG - chr7_2:87513036-87513055 None:intergenic 20.0%
!! CAATAACTAGAATCAAAAAA+AGG - chr7_2:87513038-87513057 None:intergenic 20.0%
!!! CTTTTTTTGATTCTAGTTAT+TGG + chr7_2:87513036-87513055 Msa1086690:intron 20.0%
!!! AGAGGGATTTAATATTTTAT+TGG - chr7_2:87513091-87513110 None:intergenic 20.0%
!! GCAAATTAATTTAATAAAGG+TGG + chr7_2:87513164-87513183 Msa1086690:intron 20.0%
!!! TAATTTAATAAAGGTGGATT+TGG + chr7_2:87513170-87513189 Msa1086690:intron 20.0%
!! TTCTATTACAATTCCATTTA+TGG - chr7_2:87513286-87513305 None:intergenic 20.0%
!!! TATACGAATAACTGTTATTT+TGG + chr7_2:87513575-87513594 Msa1086690:intron 20.0%
!!! TGATAAAAAGAGTGTTAATA+AGG + chr7_2:87513611-87513630 Msa1086690:CDS 20.0%
!! AGATAAAGAAATAGAGAAAA+TGG + chr7_2:87513745-87513764 Msa1086690:intron 20.0%
!! ATCCCATTTCTTATAAAAAA+AGG - chr7_2:87513920-87513939 None:intergenic 20.0%
!!! TTTATAAGAAATGGGATTTT+CGG + chr7_2:87513923-87513942 Msa1086690:intron 20.0%
!!! AATTAATCGTTGTTGTTTTA+AGG - chr7_2:87514130-87514149 None:intergenic 20.0%
!!! TTTTTTTTTAGAACAGTAGT+AGG - chr7_2:87514267-87514286 None:intergenic 20.0%
! AAAAAAAAAACGAACGAAGA+GGG - chr7_2:87513108-87513127 None:intergenic 25.0%
! AAAAAAAAAAACGAACGAAG+AGG - chr7_2:87513109-87513128 None:intergenic 25.0%
! TGGAATTGTAATAGAATACT+TGG + chr7_2:87513290-87513309 Msa1086690:intron 25.0%
! GGAATTGTAATAGAATACTT+GGG + chr7_2:87513291-87513310 Msa1086690:intron 25.0%
! AGTGAATCAAAAAAAACCAA+AGG + chr7_2:87513529-87513548 Msa1086690:intron 25.0%
! TTATAGAATTTACCTCCTAA+GGG - chr7_2:87513786-87513805 None:intergenic 25.0%
! TTTATAGAATTTACCTCCTA+AGG - chr7_2:87513787-87513806 None:intergenic 25.0%
! AAAAAAAAAACGAACGAAGA+GGG - chr7_2:87513108-87513127 None:intergenic 25.0%
! AAAAAAAAAAACGAACGAAG+AGG - chr7_2:87513109-87513128 None:intergenic 25.0%
! TGGAATTGTAATAGAATACT+TGG + chr7_2:87513290-87513309 Msa1086690:intron 25.0%
! GGAATTGTAATAGAATACTT+GGG + chr7_2:87513291-87513310 Msa1086690:intron 25.0%
! AGTGAATCAAAAAAAACCAA+AGG + chr7_2:87513529-87513548 Msa1086690:intron 25.0%
! TTATAGAATTTACCTCCTAA+GGG - chr7_2:87513786-87513805 None:intergenic 25.0%
! TTTATAGAATTTACCTCCTA+AGG - chr7_2:87513787-87513806 None:intergenic 25.0%
TTACAAGAAAAAAACGAAGG+AGG + chr7_2:87512887-87512906 Msa1086690:CDS 30.0%
TCTAAAAACATATCTCTCTG+TGG + chr7_2:87512925-87512944 Msa1086690:CDS 30.0%
AGAAATCAATCGTTTATTCC+CGG + chr7_2:87512997-87513016 Msa1086690:intron 30.0%
! TTTGATTCTAGTTATTGGCA+CGG + chr7_2:87513041-87513060 Msa1086690:intron 30.0%
AAAAACTCCTAATTTCACTG+AGG - chr7_2:87513196-87513215 None:intergenic 30.0%
TAATAGAGTGAGACCATAAA+TGG + chr7_2:87513270-87513289 Msa1086690:intron 30.0%
ATTGTAATAGAATACTTGGG+CGG + chr7_2:87513294-87513313 Msa1086690:intron 30.0%
GAATCAAAAAAAACCAAAGG+AGG + chr7_2:87513532-87513551 Msa1086690:intron 30.0%
TATTCGTATATCTTTACCCT+TGG - chr7_2:87513565-87513584 None:intergenic 30.0%
! AGAGTGTTAATAAGGAATCT+AGG + chr7_2:87513619-87513638 Msa1086690:CDS 30.0%
GAGTGTTAATAAGGAATCTA+GGG + chr7_2:87513620-87513639 Msa1086690:CDS 30.0%
AGTGTTAATAAGGAATCTAG+GGG + chr7_2:87513621-87513640 Msa1086690:CDS 30.0%
ATCGTATGTTTGCAACAAAA+GGG - chr7_2:87513717-87513736 None:intergenic 30.0%
AATCGTATGTTTGCAACAAA+AGG - chr7_2:87513718-87513737 None:intergenic 30.0%
GTATAGGAATAAACAAACCA+TGG + chr7_2:87513945-87513964 Msa1086690:CDS 30.0%
! AATCTAAGCAATCTTTTCGT+AGG + chr7_2:87513992-87514011 Msa1086690:CDS 30.0%
!! TATCGACTTATTAGTCAACA+AGG + chr7_2:87514072-87514091 Msa1086690:CDS 30.0%
AAAGGTGACGAATTAACAAA+AGG - chr7_2:87514192-87514211 None:intergenic 30.0%
TTACAAGAAAAAAACGAAGG+AGG + chr7_2:87512887-87512906 Msa1086690:CDS 30.0%
TCTAAAAACATATCTCTCTG+TGG + chr7_2:87512925-87512944 Msa1086690:CDS 30.0%
AGAAATCAATCGTTTATTCC+CGG + chr7_2:87512997-87513016 Msa1086690:intron 30.0%
! TTTGATTCTAGTTATTGGCA+CGG + chr7_2:87513041-87513060 Msa1086690:intron 30.0%
AAAAACTCCTAATTTCACTG+AGG - chr7_2:87513196-87513215 None:intergenic 30.0%
TAATAGAGTGAGACCATAAA+TGG + chr7_2:87513270-87513289 Msa1086690:intron 30.0%
ATTGTAATAGAATACTTGGG+CGG + chr7_2:87513294-87513313 Msa1086690:intron 30.0%
GAATCAAAAAAAACCAAAGG+AGG + chr7_2:87513532-87513551 Msa1086690:intron 30.0%
TATTCGTATATCTTTACCCT+TGG - chr7_2:87513565-87513584 None:intergenic 30.0%
! AGAGTGTTAATAAGGAATCT+AGG + chr7_2:87513619-87513638 Msa1086690:CDS 30.0%
GAGTGTTAATAAGGAATCTA+GGG + chr7_2:87513620-87513639 Msa1086690:CDS 30.0%
AGTGTTAATAAGGAATCTAG+GGG + chr7_2:87513621-87513640 Msa1086690:CDS 30.0%
ATCGTATGTTTGCAACAAAA+GGG - chr7_2:87513717-87513736 None:intergenic 30.0%
AATCGTATGTTTGCAACAAA+AGG - chr7_2:87513718-87513737 None:intergenic 30.0%
GTATAGGAATAAACAAACCA+TGG + chr7_2:87513945-87513964 Msa1086690:CDS 30.0%
! AATCTAAGCAATCTTTTCGT+AGG + chr7_2:87513992-87514011 Msa1086690:CDS 30.0%
!! TATCGACTTATTAGTCAACA+AGG + chr7_2:87514072-87514091 Msa1086690:CDS 30.0%
AAAGGTGACGAATTAACAAA+AGG - chr7_2:87514192-87514211 None:intergenic 30.0%
! TGAAATTAGGAGTTTTTCCC+AGG + chr7_2:87513199-87513218 Msa1086690:intron 35.0%
CTTCAATTCCATTGAAACCT+GGG - chr7_2:87513219-87513238 None:intergenic 35.0%
ACTTCAATTCCATTGAAACC+TGG - chr7_2:87513220-87513239 None:intergenic 35.0%
TTGTAATAGAATACTTGGGC+GGG + chr7_2:87513295-87513314 Msa1086690:intron 35.0%
TTCGAAGCGAAGAAGAAAAA+AGG - chr7_2:87513490-87513509 None:intergenic 35.0%
AAAAAACCAAAGGAGGTTCA+TGG + chr7_2:87513539-87513558 Msa1086690:intron 35.0%
TTTCTCAATTCCAATCGACT+AGG - chr7_2:87513687-87513706 None:intergenic 35.0%
! AGAAATGGGATTTTCGGTAT+AGG + chr7_2:87513929-87513948 Msa1086690:intron 35.0%
! TGAAATTAGGAGTTTTTCCC+AGG + chr7_2:87513199-87513218 Msa1086690:intron 35.0%
CTTCAATTCCATTGAAACCT+GGG - chr7_2:87513219-87513238 None:intergenic 35.0%
ACTTCAATTCCATTGAAACC+TGG - chr7_2:87513220-87513239 None:intergenic 35.0%
TTGTAATAGAATACTTGGGC+GGG + chr7_2:87513295-87513314 Msa1086690:intron 35.0%
TTCGAAGCGAAGAAGAAAAA+AGG - chr7_2:87513490-87513509 None:intergenic 35.0%
AAAAAACCAAAGGAGGTTCA+TGG + chr7_2:87513539-87513558 Msa1086690:intron 35.0%
TTTCTCAATTCCAATCGACT+AGG - chr7_2:87513687-87513706 None:intergenic 35.0%
! AGAAATGGGATTTTCGGTAT+AGG + chr7_2:87513929-87513948 Msa1086690:intron 35.0%
GATTTGGCCTCAGTGAAATT+AGG + chr7_2:87513186-87513205 Msa1086690:intron 40.0%
! GAGTTTTTCCCAGGTTTCAA+TGG + chr7_2:87513208-87513227 Msa1086690:intron 40.0%
ACACAATACACCTAGTCGAT+TGG + chr7_2:87513674-87513693 Msa1086690:intron 40.0%
ATTGTTTGTGTGTCACCCTT+AGG + chr7_2:87513768-87513787 Msa1086690:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG - chr7_2:87513965-87513984 None:intergenic 40.0%
GATTTGGCCTCAGTGAAATT+AGG + chr7_2:87513186-87513205 Msa1086690:intron 40.0%
! GAGTTTTTCCCAGGTTTCAA+TGG + chr7_2:87513208-87513227 Msa1086690:intron 40.0%
ACACAATACACCTAGTCGAT+TGG + chr7_2:87513674-87513693 Msa1086690:intron 40.0%
ATTGTTTGTGTGTCACCCTT+AGG + chr7_2:87513768-87513787 Msa1086690:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG - chr7_2:87513965-87513984 None:intergenic 40.0%
! AACCATAGAGTACTTGCCAC+TGG - chr7_2:87512953-87512972 None:intergenic 45.0%
AAGGGGAATGTCAATGCATC+CGG - chr7_2:87513019-87513038 None:intergenic 45.0%
! TTCTAGTTATTGGCACGGCA+AGG + chr7_2:87513046-87513065 Msa1086690:intron 45.0%
TCTAGTTATTGGCACGGCAA+GGG + chr7_2:87513047-87513066 Msa1086690:intron 45.0%
AATCAATTCGATCCCCCGAT+TGG - chr7_2:87514032-87514051 None:intergenic 45.0%
! AACCATAGAGTACTTGCCAC+TGG - chr7_2:87512953-87512972 None:intergenic 45.0%
AAGGGGAATGTCAATGCATC+CGG - chr7_2:87513019-87513038 None:intergenic 45.0%
! TTCTAGTTATTGGCACGGCA+AGG + chr7_2:87513046-87513065 Msa1086690:intron 45.0%
TCTAGTTATTGGCACGGCAA+GGG + chr7_2:87513047-87513066 Msa1086690:intron 45.0%
AATCAATTCGATCCCCCGAT+TGG - chr7_2:87514032-87514051 None:intergenic 45.0%
!!! ATATTTATATTTGTTATATA+AGG - chr7_2:87513859-87513878 None:intergenic 5.0%
!!! ATATTTATATTTGTTATATA+AGG - chr7_2:87513859-87513878 None:intergenic 5.0%
ATATCTCTCTGTGGCACCAG+TGG + chr7_2:87512934-87512953 Msa1086690:CDS 50.0%
CACCAGTGGCAAGTACTCTA+TGG + chr7_2:87512948-87512967 Msa1086690:CDS 50.0%
GGCAAGTACTCTATGGTTCG+CGG + chr7_2:87512955-87512974 Msa1086690:CDS 50.0%
AGGGGAATGTCAATGCATCC+GGG - chr7_2:87513018-87513037 None:intergenic 50.0%
CTAGTTATTGGCACGGCAAG+GGG + chr7_2:87513048-87513067 Msa1086690:intron 50.0%
CAAAGGAGGTTCATGGCCAA+GGG + chr7_2:87513546-87513565 Msa1086690:intron 50.0%
GTTTGTGTGTCACCCTTAGG+AGG + chr7_2:87513771-87513790 Msa1086690:intron 50.0%
GAGTTTGTCCCCGATCCAAT+CGG + chr7_2:87514014-87514033 Msa1086690:CDS 50.0%
AGTTTGTCCCCGATCCAATC+GGG + chr7_2:87514015-87514034 Msa1086690:CDS 50.0%
ATTCGATCCCCCGATTGGAT+CGG - chr7_2:87514027-87514046 None:intergenic 50.0%
ATATCTCTCTGTGGCACCAG+TGG + chr7_2:87512934-87512953 Msa1086690:CDS 50.0%
CACCAGTGGCAAGTACTCTA+TGG + chr7_2:87512948-87512967 Msa1086690:CDS 50.0%
GGCAAGTACTCTATGGTTCG+CGG + chr7_2:87512955-87512974 Msa1086690:CDS 50.0%
AGGGGAATGTCAATGCATCC+GGG - chr7_2:87513018-87513037 None:intergenic 50.0%
CTAGTTATTGGCACGGCAAG+GGG + chr7_2:87513048-87513067 Msa1086690:intron 50.0%
CAAAGGAGGTTCATGGCCAA+GGG + chr7_2:87513546-87513565 Msa1086690:intron 50.0%
GTTTGTGTGTCACCCTTAGG+AGG + chr7_2:87513771-87513790 Msa1086690:intron 50.0%
GAGTTTGTCCCCGATCCAAT+CGG + chr7_2:87514014-87514033 Msa1086690:CDS 50.0%
AGTTTGTCCCCGATCCAATC+GGG + chr7_2:87514015-87514034 Msa1086690:CDS 50.0%
ATTCGATCCCCCGATTGGAT+CGG - chr7_2:87514027-87514046 None:intergenic 50.0%
! CTATGGTTCGCGGTTCTAGC+AGG + chr7_2:87512965-87512984 Msa1086690:CDS 55.0%
CCTTGGCCATGAACCTCCTT+TGG - chr7_2:87513548-87513567 None:intergenic 55.0%
CCAAAGGAGGTTCATGGCCA+AGG + chr7_2:87513545-87513564 Msa1086690:intron 55.0%
GTTTGTCCCCGATCCAATCG+GGG + chr7_2:87514016-87514035 Msa1086690:CDS 55.0%
TTTGTCCCCGATCCAATCGG+GGG + chr7_2:87514017-87514036 Msa1086690:CDS 55.0%
TTCGATCCCCCGATTGGATC+GGG - chr7_2:87514026-87514045 None:intergenic 55.0%
! CTATGGTTCGCGGTTCTAGC+AGG + chr7_2:87512965-87512984 Msa1086690:CDS 55.0%
CCTTGGCCATGAACCTCCTT+TGG - chr7_2:87513548-87513567 None:intergenic 55.0%
CCAAAGGAGGTTCATGGCCA+AGG + chr7_2:87513545-87513564 Msa1086690:intron 55.0%
GTTTGTCCCCGATCCAATCG+GGG + chr7_2:87514016-87514035 Msa1086690:CDS 55.0%
TTTGTCCCCGATCCAATCGG+GGG + chr7_2:87514017-87514036 Msa1086690:CDS 55.0%
TTCGATCCCCCGATTGGATC+GGG - chr7_2:87514026-87514045 None:intergenic 55.0%
TCGATCCCCCGATTGGATCG+GGG - chr7_2:87514025-87514044 None:intergenic 60.0%
TCGATCCCCCGATTGGATCG+GGG - chr7_2:87514025-87514044 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 87512875 87514296 87512875 ID=Msa1086690;Name=Msa1086690
chr7_2 mRNA 87512875 87514296 87512875 ID=Msa1086690-mRNA-1;Parent=Msa1086690;Name=Msa1086690-mRNA-1;_AED=0.31;_eAED=0.36;_QI=0|0|0|1|0|0|3|0|177
chr7_2 exon 87512875 87513007 87512875 ID=Msa1086690-mRNA-1:exon:23889;Parent=Msa1086690-mRNA-1
chr7_2 exon 87513608 87513642 87513608 ID=Msa1086690-mRNA-1:exon:23890;Parent=Msa1086690-mRNA-1
chr7_2 exon 87513931 87514296 87513931 ID=Msa1086690-mRNA-1:exon:23891;Parent=Msa1086690-mRNA-1
chr7_2 CDS 87512875 87513007 87512875 ID=Msa1086690-mRNA-1:cds;Parent=Msa1086690-mRNA-1
chr7_2 CDS 87513608 87513642 87513608 ID=Msa1086690-mRNA-1:cds;Parent=Msa1086690-mRNA-1
chr7_2 CDS 87513931 87514296 87513931 ID=Msa1086690-mRNA-1:cds;Parent=Msa1086690-mRNA-1
Gene Sequence

>Msa1086690

ATGTATTCCAAATTACAAGAAAAAAACGAAGGAGGATTTGAAATGCGAGATCTAAAAACATATCTCTCTGTGGCACCAGTGGCAAGTACTCTATGGTTCGCGGTTCTAGCAGGTCTCTTGATAGAAATCAATCTTGTGATAAAAAGAGTGTTAATAAGGAATCTAGGGAAATGGGATTTTCGGTATAGGAATAAACAAACCATGGATAAATCTAAGCGACTCTTTCTTAAATCTAAGCAATCTTTTCGTAGGAGTTTGTCCCCGATCCAATCGGGGGATCGAATTGATTATAAAAACATGAGTTTACTTTATCGACTTATTAGTCAACAAGGAAAAATATTATCTAGACGCGTGAATAGATCAACCTTAAAACAACAACGATTAATTACGATTGCTATAAAACAAGCTCGTATTTTATCTTTGTTACCTTTTGTTAATTCGTCACCTTTTGTGAATAATGAAAAAAAAAAATATGAAAAAAGCGAGTCGATCACTAGAACTCCTACTACTGTTCTAAAAAAAAACAAAAAATAG

Protein sequence

>Msa1086690

MYSKLQEKNEGGFEMRDLKTYLSVAPVASTLWFAVLAGLLIEINLVIKRVLIRNLGKWDFRYRNKQTMDKSKRLFLKSKQSFRRSLSPIQSGDRIDYKNMSLLYRLISQQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVNSSPFVNNEKKKYEKSESITRTPTTVLKKNKK*