Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268850 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268850 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268850 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017120 | Msa0268850 | 0.807037 | 6.146584e-50 | -8.615850e-47 |
Msa0035090 | Msa0268850 | 0.824128 | 9.548238e-54 | -8.615850e-47 |
Msa0039200 | Msa0268850 | 0.818153 | 2.274639e-52 | -8.615850e-47 |
Msa0040190 | Msa0268850 | 0.818243 | 2.169871e-52 | -8.615850e-47 |
Msa0083570 | Msa0268850 | 0.802947 | 4.405254e-49 | -8.615850e-47 |
Msa0086090 | Msa0268850 | 0.800647 | 1.306764e-48 | -8.615850e-47 |
Msa0086820 | Msa0268850 | 0.819556 | 1.091496e-52 | -8.615850e-47 |
Msa0087880 | Msa0268850 | 0.815825 | 7.581218e-52 | -8.615850e-47 |
Msa0092750 | Msa0268850 | 0.831120 | 1.998772e-55 | -8.615850e-47 |
Msa0094420 | Msa0268850 | 0.823213 | 1.563138e-53 | -8.615850e-47 |
Msa0095140 | Msa0268850 | 0.878672 | 2.323717e-69 | -8.615850e-47 |
Msa0095180 | Msa0268850 | 0.838239 | 3.236182e-57 | -8.615850e-47 |
Msa0095200 | Msa0268850 | 0.866183 | 3.435990e-65 | -8.615850e-47 |
Msa0095240 | Msa0268850 | 0.842746 | 2.141522e-58 | -8.615850e-47 |
Msa0095270 | Msa0268850 | 0.874572 | 6.081964e-68 | -8.615850e-47 |
Msa0099830 | Msa0268850 | 0.801268 | 9.757595e-49 | -8.615850e-47 |
Msa0103060 | Msa0268850 | 0.806028 | 1.003691e-49 | -8.615850e-47 |
Msa0103780 | Msa0268850 | 0.820056 | 8.390111e-53 | -8.615850e-47 |
Msa0110710 | Msa0268850 | 0.803964 | 2.711337e-49 | -8.615850e-47 |
Msa0123940 | Msa0268850 | 0.806877 | 6.645158e-50 | -8.615850e-47 |
Msa0130120 | Msa0268850 | 0.814434 | 1.543429e-51 | -8.615850e-47 |
Msa0132620 | Msa0268850 | 0.803334 | 3.663117e-49 | -8.615850e-47 |
Msa0133670 | Msa0268850 | 0.821975 | 3.033666e-53 | -8.615850e-47 |
Msa0133880 | Msa0268850 | 0.824747 | 6.826010e-54 | -8.615850e-47 |
Msa0134550 | Msa0268850 | 0.825317 | 5.008036e-54 | -8.615850e-47 |
Msa0139740 | Msa0268850 | 0.829048 | 6.401534e-55 | -8.615850e-47 |
Msa0141670 | Msa0268850 | 0.841483 | 4.623244e-58 | -8.615850e-47 |
Msa0156780 | Msa0268850 | 0.814816 | 1.270615e-51 | -8.615850e-47 |
Msa0157020 | Msa0268850 | 0.813576 | 2.386631e-51 | -8.615850e-47 |
Msa0175900 | Msa0268850 | 0.827200 | 1.783761e-54 | -8.615850e-47 |
Msa0180980 | Msa0268850 | 0.806906 | 6.550370e-50 | -8.615850e-47 |
Msa0184120 | Msa0268850 | 0.822039 | 2.931554e-53 | -8.615850e-47 |
Msa0190000 | Msa0268850 | 0.828368 | 9.348597e-55 | -8.615850e-47 |
Msa0221860 | Msa0268850 | 0.856889 | 2.369962e-62 | -8.615850e-47 |
Msa0222070 | Msa0268850 | 0.821872 | 3.204702e-53 | -8.615850e-47 |
Msa0222120 | Msa0268850 | 0.822457 | 2.345393e-53 | -8.615850e-47 |
Msa0224960 | Msa0268850 | 0.823267 | 1.518785e-53 | -8.615850e-47 |
Msa0225010 | Msa0268850 | 0.813125 | 2.999213e-51 | -8.615850e-47 |
Msa0227290 | Msa0268850 | 0.816193 | 6.273356e-52 | -8.615850e-47 |
Msa0231310 | Msa0268850 | 0.801221 | 9.971933e-49 | -8.615850e-47 |
Msa0253410 | Msa0268850 | 0.812576 | 3.954395e-51 | -8.615850e-47 |
Msa0257130 | Msa0268850 | 0.808566 | 2.908438e-50 | -8.615850e-47 |
Msa0263620 | Msa0268850 | 0.823601 | 1.268892e-53 | -8.615850e-47 |
Msa0268180 | Msa0268850 | 0.947587 | 5.030473e-106 | -8.615850e-47 |
Msa0268220 | Msa0268850 | 0.848998 | 4.286981e-60 | -8.615850e-47 |
Msa0268340 | Msa0268850 | 0.850535 | 1.594414e-60 | -8.615850e-47 |
Msa0268380 | Msa0268850 | 0.899127 | 2.695595e-77 | -8.615850e-47 |
Msa0268420 | Msa0268850 | 0.938858 | 3.351616e-99 | -8.615850e-47 |
Msa0268460 | Msa0268850 | 0.858145 | 1.007383e-62 | -8.615850e-47 |
Msa0268500 | Msa0268850 | 0.860385 | 2.143523e-63 | -8.615850e-47 |
Msa0268540 | Msa0268850 | 0.927946 | 5.776428e-92 | -8.615850e-47 |
Msa0268650 | Msa0268850 | 0.938466 | 6.425554e-99 | -8.615850e-47 |
Msa0268680 | Msa0268850 | 0.823905 | 1.076694e-53 | -8.615850e-47 |
Msa0268690 | Msa0268850 | 0.828994 | 6.595211e-55 | -8.615850e-47 |
Msa0268730 | Msa0268850 | 0.883755 | 3.429686e-71 | -8.615850e-47 |
Msa0268760 | Msa0268850 | 0.821020 | 5.042000e-53 | -8.615850e-47 |
Msa0268850 | Msa0268900 | 0.855431 | 6.337489e-62 | -8.615850e-47 |
Msa0268850 | Msa0268930 | 0.887284 | 1.633640e-72 | -8.615850e-47 |
Msa0268850 | Msa0269060 | 0.954686 | 1.690375e-112 | -8.615850e-47 |
Msa0268850 | Msa0269100 | 0.860617 | 1.822646e-63 | -8.615850e-47 |
Msa0268850 | Msa0301460 | 0.814821 | 1.267544e-51 | -8.615850e-47 |
Msa0268850 | Msa0301800 | 0.810035 | 1.407744e-50 | -8.615850e-47 |
Msa0268850 | Msa0304870 | 0.801230 | 9.930355e-49 | -8.615850e-47 |
Msa0268850 | Msa0306130 | 0.829585 | 4.741120e-55 | -8.615850e-47 |
Msa0268850 | Msa0341260 | 0.800199 | 1.611995e-48 | -8.615850e-47 |
Msa0268850 | Msa0344200 | 0.876782 | 1.061940e-68 | -8.615850e-47 |
Msa0268850 | Msa0344250 | 0.855066 | 8.096357e-62 | -8.615850e-47 |
Msa0268850 | Msa0365150 | 0.819435 | 1.163092e-52 | -8.615850e-47 |
Msa0268850 | Msa0380420 | 0.814108 | 1.822012e-51 | -8.615850e-47 |
Msa0268850 | Msa0417150 | 0.805585 | 1.243399e-49 | -8.615850e-47 |
Msa0268850 | Msa0417630 | 0.816273 | 6.020728e-52 | -8.615850e-47 |
Msa0268850 | Msa0421800 | 0.810098 | 1.364630e-50 | -8.615850e-47 |
Msa0268850 | Msa0426860 | 0.807447 | 5.031230e-50 | -8.615850e-47 |
Msa0268850 | Msa0426890 | 0.802138 | 6.468724e-49 | -8.615850e-47 |
Msa0268850 | Msa0427050 | 0.832620 | 8.518316e-56 | -8.615850e-47 |
Msa0268850 | Msa0449930 | 0.807413 | 5.116376e-50 | -8.615850e-47 |
Msa0268850 | Msa0464500 | 0.831964 | 1.237971e-55 | -8.615850e-47 |
Msa0268850 | Msa0466100 | 0.801987 | 6.947547e-49 | -8.615850e-47 |
Msa0268850 | Msa0467800 | 0.810575 | 1.076918e-50 | -8.615850e-47 |
Msa0268850 | Msa0467880 | 0.806980 | 6.319721e-50 | -8.615850e-47 |
Msa0268850 | Msa0473450 | 0.820954 | 5.221541e-53 | -8.615850e-47 |
Msa0268850 | Msa0475830 | 0.802336 | 5.888022e-49 | -8.615850e-47 |
Msa0268850 | Msa0482020 | 0.821671 | 3.567250e-53 | -8.615850e-47 |
Msa0268850 | Msa0487560 | 0.812857 | 3.433306e-51 | -8.615850e-47 |
Msa0268850 | Msa0487620 | 0.804661 | 1.940547e-49 | -8.615850e-47 |
Msa0268850 | Msa0514260 | 0.807705 | 4.436101e-50 | -8.615850e-47 |
Msa0268850 | Msa0524090 | 0.800720 | 1.262655e-48 | -8.615850e-47 |
Msa0268850 | Msa0540340 | 0.801421 | 9.077816e-49 | -8.615850e-47 |
Msa0268850 | Msa0542040 | 0.804401 | 2.199373e-49 | -8.615850e-47 |
Msa0268850 | Msa0550720 | 0.800887 | 1.167222e-48 | -8.615850e-47 |
Msa0268850 | Msa0558890 | 0.825183 | 5.385221e-54 | -8.615850e-47 |
Msa0268850 | Msa0577870 | 0.801093 | 1.059456e-48 | -8.615850e-47 |
Msa0268850 | Msa0582530 | 0.898429 | 5.352402e-77 | -8.615850e-47 |
Msa0268850 | Msa0582570 | 0.861898 | 7.421334e-64 | -8.615850e-47 |
Msa0268850 | Msa0582580 | 0.865062 | 7.753279e-65 | -8.615850e-47 |
Msa0268850 | Msa0582620 | 0.903751 | 2.509380e-79 | -8.615850e-47 |
Msa0268850 | Msa0582710 | 0.916862 | 1.068581e-85 | -8.615850e-47 |
Msa0268850 | Msa0582740 | 0.905613 | 3.567696e-80 | -8.615850e-47 |
Msa0268850 | Msa0582830 | 0.896943 | 2.268495e-76 | -8.615850e-47 |
Msa0268850 | Msa0582900 | 0.905603 | 3.604422e-80 | -8.615850e-47 |
Msa0268850 | Msa0586890 | 0.804727 | 1.880466e-49 | -8.615850e-47 |
Msa0268850 | Msa0587060 | 0.803904 | 2.790219e-49 | -8.615850e-47 |
Msa0268850 | Msa0591370 | 0.818284 | 2.124415e-52 | -8.615850e-47 |
Msa0268850 | Msa0595780 | 0.815627 | 8.389902e-52 | -8.615850e-47 |
Msa0268850 | Msa0601780 | 0.810728 | 9.977352e-51 | -8.615850e-47 |
Msa0268850 | Msa0606060 | 0.809847 | 1.545415e-50 | -8.615850e-47 |
Msa0268850 | Msa0606140 | 0.812096 | 5.035439e-51 | -8.615850e-47 |
Msa0268850 | Msa0606680 | 0.811603 | 6.445715e-51 | -8.615850e-47 |
Msa0268850 | Msa0619060 | 0.804547 | 2.049586e-49 | -8.615850e-47 |
Msa0268850 | Msa0619330 | 0.808527 | 2.964520e-50 | -8.615850e-47 |
Msa0268850 | Msa0622390 | 0.800365 | 1.491451e-48 | -8.615850e-47 |
Msa0268850 | Msa0624240 | 0.802740 | 4.860504e-49 | -8.615850e-47 |
Msa0268850 | Msa0626890 | 0.801242 | 9.874201e-49 | -8.615850e-47 |
Msa0268850 | Msa0635990 | 0.812305 | 4.532120e-51 | -8.615850e-47 |
Msa0268850 | Msa0640880 | 0.807593 | 4.685357e-50 | -8.615850e-47 |
Msa0268850 | Msa0647110 | 0.815519 | 8.868955e-52 | -8.615850e-47 |
Msa0268850 | Msa0653710 | 0.813864 | 2.062730e-51 | -8.615850e-47 |
Msa0268850 | Msa0654060 | 0.812146 | 4.908623e-51 | -8.615850e-47 |
Msa0268850 | Msa0662850 | 0.800655 | 1.301671e-48 | -8.615850e-47 |
Msa0268850 | Msa0668630 | 0.806443 | 8.205048e-50 | -8.615850e-47 |
Msa0268850 | Msa0681890 | 0.816586 | 5.124000e-52 | -8.615850e-47 |
Msa0268850 | Msa0686610 | 0.807777 | 4.281862e-50 | -8.615850e-47 |
Msa0268850 | Msa0698900 | 0.808407 | 3.143838e-50 | -8.615850e-47 |
Msa0268850 | Msa0702070 | 0.813497 | 2.483971e-51 | -8.615850e-47 |
Msa0268850 | Msa0702120 | 0.800313 | 1.527896e-48 | -8.615850e-47 |
Msa0268850 | Msa0704570 | 0.801688 | 8.001906e-49 | -8.615850e-47 |
Msa0268850 | Msa0706710 | 0.808171 | 3.531511e-50 | -8.615850e-47 |
Msa0268850 | Msa0719340 | 0.814537 | 1.464771e-51 | -8.615850e-47 |
Msa0268850 | Msa0727020 | 0.837318 | 5.577968e-57 | -8.615850e-47 |
Msa0268850 | Msa0736930 | 0.807796 | 4.243935e-50 | -8.615850e-47 |
Msa0268850 | Msa0739570 | 0.816094 | 6.601778e-52 | -8.615850e-47 |
Msa0268850 | Msa0740420 | 0.809631 | 1.719756e-50 | -8.615850e-47 |
Msa0268850 | Msa0766880 | 0.849145 | 3.902505e-60 | -8.615850e-47 |
Msa0268850 | Msa0772150 | 0.807838 | 4.155723e-50 | -8.615850e-47 |
Msa0268850 | Msa0772210 | 0.835341 | 1.775013e-56 | -8.615850e-47 |
Msa0268850 | Msa0782330 | 0.827668 | 1.377834e-54 | -8.615850e-47 |
Msa0268850 | Msa0796450 | 0.815748 | 7.884495e-52 | -8.615850e-47 |
Msa0268850 | Msa0804930 | 0.831208 | 1.901511e-55 | -8.615850e-47 |
Msa0268850 | Msa0855490 | 0.817833 | 2.685689e-52 | -8.615850e-47 |
Msa0268850 | Msa0860270 | 0.825728 | 4.000659e-54 | -8.615850e-47 |
Msa0268850 | Msa0900320 | 0.801656 | 8.123736e-49 | -8.615850e-47 |
Msa0268850 | Msa0910650 | 0.808978 | 2.374521e-50 | -8.615850e-47 |
Msa0268850 | Msa0924820 | 0.831719 | 1.422946e-55 | -8.615850e-47 |
Msa0268850 | Msa0924860 | 0.852659 | 3.993512e-61 | -8.615850e-47 |
Msa0268850 | Msa0924890 | 0.826381 | 2.798206e-54 | -8.615850e-47 |
Msa0268850 | Msa0925020 | 0.850348 | 1.800206e-60 | -8.615850e-47 |
Msa0268850 | Msa0926860 | 0.801291 | 9.649919e-49 | -8.615850e-47 |
Msa0268850 | Msa0931090 | 0.907685 | 3.877458e-81 | -8.615850e-47 |
Msa0268850 | Msa0931150 | 0.909702 | 4.250946e-82 | -8.615850e-47 |
Msa0268850 | Msa0931200 | 0.847768 | 9.384952e-60 | -8.615850e-47 |
Msa0268850 | Msa0931280 | 0.917755 | 3.607692e-86 | -8.615850e-47 |
Msa0268850 | Msa0955310 | 0.814270 | 1.677825e-51 | -8.615850e-47 |
Msa0268850 | Msa0958020 | 0.804685 | 1.918847e-49 | -8.615850e-47 |
Msa0268850 | Msa0978000 | 0.807401 | 5.147506e-50 | -8.615850e-47 |
Msa0268850 | Msa0983670 | 0.844742 | 6.260077e-59 | -8.615850e-47 |
Msa0268850 | Msa0983710 | 0.836430 | 9.399007e-57 | -8.615850e-47 |
Msa0268850 | Msa0992570 | 0.835984 | 1.220452e-56 | -8.615850e-47 |
Msa0268850 | Msa0992590 | 0.841188 | 5.528298e-58 | -8.615850e-47 |
Msa0268850 | Msa1002040 | 0.850578 | 1.550833e-60 | -8.615850e-47 |
Msa0268850 | Msa1022310 | 0.808570 | 2.902531e-50 | -8.615850e-47 |
Msa0268850 | Msa1024580 | 0.823495 | 1.342944e-53 | -8.615850e-47 |
Msa0268850 | Msa1030280 | 0.843741 | 1.162509e-58 | -8.615850e-47 |
Msa0268850 | Msa1040770 | 0.817067 | 3.996969e-52 | -8.615850e-47 |
Msa0268850 | Msa1044040 | 0.803890 | 2.808980e-49 | -8.615850e-47 |
Msa0268850 | Msa1049440 | 0.820524 | 6.553200e-53 | -8.615850e-47 |
Msa0268850 | Msa1063180 | 0.807027 | 6.177812e-50 | -8.615850e-47 |
Msa0268850 | Msa1070900 | 0.815161 | 1.065178e-51 | -8.615850e-47 |
Msa0268850 | Msa1079610 | 0.816109 | 6.549982e-52 | -8.615850e-47 |
Msa0268850 | Msa1086020 | 0.864420 | 1.231717e-64 | -8.615850e-47 |
Msa0268850 | Msa1086060 | 0.889595 | 2.104118e-73 | -8.615850e-47 |
Msa0268850 | Msa1086160 | 0.879660 | 1.039729e-69 | -8.615850e-47 |
Msa0268850 | Msa1086170 | 0.905069 | 6.332754e-80 | -8.615850e-47 |
Msa0268850 | Msa1086260 | 0.826576 | 2.515525e-54 | -8.615850e-47 |
Msa0268850 | Msa1086290 | 0.937304 | 4.307117e-98 | -8.615850e-47 |
Msa0268850 | Msa1086330 | 0.849823 | 2.525483e-60 | -8.615850e-47 |
Msa0268850 | Msa1086340 | 0.861386 | 1.063933e-63 | -8.615850e-47 |
Msa0268850 | Msa1086370 | 0.917861 | 3.167427e-86 | -8.615850e-47 |
Msa0268850 | Msa1086410 | 0.826469 | 2.666456e-54 | -8.615850e-47 |
Msa0268850 | Msa1086440 | 0.853507 | 2.282539e-61 | -8.615850e-47 |
Msa0268850 | Msa1086480 | 0.923135 | 3.957427e-89 | -8.615850e-47 |
Msa0268850 | Msa1086520 | 0.846845 | 1.681506e-59 | -8.615850e-47 |
Msa0268850 | Msa1086630 | 0.858730 | 6.741537e-63 | -8.615850e-47 |
Msa0268850 | Msa1086690 | 0.844829 | 5.931152e-59 | -8.615850e-47 |
Msa0268850 | Msa1086830 | 0.861786 | 8.031155e-64 | -8.615850e-47 |
Msa0268850 | Msa1086870 | 0.877452 | 6.213316e-69 | -8.615850e-47 |
Msa0268850 | Msa1087000 | 0.823344 | 1.457209e-53 | -8.615850e-47 |
Msa0268850 | Msa1090230 | 0.823176 | 1.594942e-53 | -8.615850e-47 |
Msa0268850 | Msa1091690 | 0.868807 | 4.963147e-66 | -8.615850e-47 |
Msa0268850 | Msa1115580 | 0.800494 | 1.403830e-48 | -8.615850e-47 |
Msa0268850 | Msa1120540 | 0.814813 | 1.272391e-51 | -8.615850e-47 |
Msa0268850 | Msa1123340 | 0.812264 | 4.627627e-51 | -8.615850e-47 |
Msa0268850 | Msa1124440 | 0.822082 | 2.864906e-53 | -8.615850e-47 |
Msa0268850 | Msa1128350 | 0.809704 | 1.658821e-50 | -8.615850e-47 |
Msa0268850 | Msa1143140 | 0.890318 | 1.097715e-73 | -8.615850e-47 |
Msa0268850 | Msa1143150 | 0.824834 | 6.510208e-54 | -8.615850e-47 |
Msa0268850 | Msa1157160 | 0.837108 | 6.312226e-57 | -8.615850e-47 |
Msa0268850 | Msa1166180 | 0.810199 | 1.297692e-50 | -8.615850e-47 |
Msa0268850 | Msa1166280 | 0.808513 | 2.985541e-50 | -8.615850e-47 |
Msa0268850 | Msa1168130 | 0.804350 | 2.253570e-49 | -8.615850e-47 |
Msa0268850 | Msa1195860 | 0.829763 | 4.290921e-55 | -8.615850e-47 |
Msa0268850 | Msa1209390 | 0.823821 | 1.127005e-53 | -8.615850e-47 |
Msa0268850 | Msa1209650 | 0.805335 | 1.403045e-49 | -8.615850e-47 |
Msa0268850 | Msa1220740 | 0.823939 | 1.057279e-53 | -8.615850e-47 |
Msa0268850 | Msa1246420 | 0.800227 | 1.591254e-48 | -8.615850e-47 |
Msa0268850 | Msa1248400 | 0.819810 | 9.550504e-53 | -8.615850e-47 |
Msa0268850 | Msa1280020 | 0.803589 | 3.243057e-49 | -8.615850e-47 |
Msa0268850 | Msa1284030 | 0.839478 | 1.546630e-57 | -8.615850e-47 |
Msa0268850 | Msa1298740 | 0.833414 | 5.406093e-56 | -8.615850e-47 |
Msa0268850 | Msa1302920 | 0.804796 | 1.819008e-49 | -8.615850e-47 |
Msa0268850 | Msa1309910 | 0.823786 | 1.148437e-53 | -8.615850e-47 |
Msa0268850 | Msa1323060 | 0.833998 | 3.864347e-56 | -8.615850e-47 |
Msa0268850 | Msa1325980 | 0.800665 | 1.295266e-48 | -8.615850e-47 |
Msa0268850 | Msa1327820 | 0.842111 | 3.155835e-58 | -8.615850e-47 |
Msa0268850 | Msa1334650 | 0.817196 | 3.737806e-52 | -8.615850e-47 |
Msa0268850 | Msa1354850 | 0.875103 | 4.009844e-68 | -8.615850e-47 |
Msa0268850 | Msa1354890 | 0.899390 | 2.078166e-77 | -8.615850e-47 |
Msa0268850 | Msa1355020 | 0.863206 | 2.936880e-64 | -8.615850e-47 |
Msa0268850 | Msa1355060 | 0.882095 | 1.388245e-70 | -8.615850e-47 |
Msa0268850 | Msa1365210 | 0.816437 | 5.531685e-52 | -8.615850e-47 |
Msa0268850 | Msa1367940 | 0.809805 | 1.577635e-50 | -8.615850e-47 |
Msa0268850 | Msa1371250 | 0.812425 | 4.268189e-51 | -8.615850e-47 |
Msa0268850 | Msa1373910 | 0.819298 | 1.249935e-52 | -8.615850e-47 |
Msa0268850 | Msa1375630 | 0.815685 | 8.145921e-52 | -8.615850e-47 |
Msa0268850 | Msa1376530 | 0.814854 | 1.245956e-51 | -8.615850e-47 |
Msa0268850 | Msa1380540 | 0.860816 | 1.586807e-63 | -8.615850e-47 |
Msa0268850 | Msa1380580 | 0.824052 | 9.948706e-54 | -8.615850e-47 |
Msa0268850 | Msa1385940 | 0.827090 | 1.895478e-54 | -8.615850e-47 |
Msa0268850 | Msa1387090 | 0.814215 | 1.726033e-51 | -8.615850e-47 |
Msa0268850 | Msa1394050 | 0.821691 | 3.529778e-53 | -8.615850e-47 |
Msa0268850 | Msa1394090 | 0.864855 | 9.002161e-65 | -8.615850e-47 |
Msa0268850 | Msa1394100 | 0.862638 | 4.397511e-64 | -8.615850e-47 |
Msa0268850 | Msa1394140 | 0.877866 | 4.454650e-69 | -8.615850e-47 |
Msa0268850 | Msa1394170 | 0.803540 | 3.319683e-49 | -8.615850e-47 |
Msa0268850 | Msa1394240 | 0.911484 | 5.770703e-83 | -8.615850e-47 |
Msa0268850 | Msa1394280 | 0.850640 | 1.489676e-60 | -8.615850e-47 |
Msa0268850 | Msa1405180 | 0.807521 | 4.854927e-50 | -8.615850e-47 |
Msa0268850 | Msa1406230 | 0.800740 | 1.250816e-48 | -8.615850e-47 |
Msa0268850 | Msa1415120 | 0.821793 | 3.342863e-53 | -8.615850e-47 |
Msa0268850 | Msa1422750 | 0.808171 | 3.530570e-50 | -8.615850e-47 |
Msa0268850 | Msa1426870 | 0.825428 | 4.711842e-54 | -8.615850e-47 |
Msa0268850 | Msa1435470 | 0.815986 | 6.979743e-52 | -8.615850e-47 |
Msa0268850 | Msa1439800 | 0.802409 | 5.687961e-49 | -8.615850e-47 |
Msa0268850 | Msa1442300 | 0.802277 | 6.056127e-49 | -8.615850e-47 |
Msa0268850 | Msa1458920 | 0.809112 | 2.222064e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268850 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
Msa0268850 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
Msa0268850 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268850 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
Msa0268850 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 2_2:-70418569 | Msa0268850:CDS |
ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 2_2:+70418466 | None:intergenic |
AATGATCCAGGACGTAATCC+TGG | 0.474800 | 2_2:-70417920 | Msa0268850:CDS |
GGATTCCTATCTAATGATCC+AGG | 0.536202 | 2_2:-70417932 | Msa0268850:CDS |
TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 2_2:+70417914 | None:intergenic |
TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 2_2:+70417927 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTCCAAATATTAAAATTTT+TGG | - | chr2_2:70418196-70418215 | Msa0268850:intron | 10.0% |
!!! | TATCCAAAAATTTTAATATT+TGG | + | chr2_2:70418202-70418221 | None:intergenic | 10.0% |
!! | ATTTCAAAAAAAAAAAACTT+AGG | + | chr2_2:70418353-70418372 | None:intergenic | 10.0% |
!!! | AATTTTAATATTTGGAATCA+AGG | + | chr2_2:70418194-70418213 | None:intergenic | 15.0% |
!! | GAAAAAACTACTTGAATAAA+GGG | + | chr2_2:70417953-70417972 | None:intergenic | 20.0% |
!! | AGAAAAAACTACTTGAATAA+AGG | + | chr2_2:70417954-70417973 | None:intergenic | 20.0% |
!!! | TTATTCAAGTAGTTTTTTCT+TGG | - | chr2_2:70417954-70417973 | Msa0268850:CDS | 20.0% |
!! | TGAAAATTCTATTATTCGAT+TGG | - | chr2_2:70418240-70418259 | Msa0268850:intron | 20.0% |
!!! | TGTGGATATGAAAAAAATTT+TGG | - | chr2_2:70418291-70418310 | Msa0268850:intron | 20.0% |
!! | TCTTATAAACTTAGTATCAA+AGG | - | chr2_2:70418382-70418401 | Msa0268850:intron | 20.0% |
!!! | GCGTTTTTTTTTAATTATCT+TGG | - | chr2_2:70418447-70418466 | Msa0268850:CDS | 20.0% |
!!! | TTTTTCTCTTAGCTTTTGTT+TGG | - | chr2_2:70418046-70418065 | Msa0268850:intron | 25.0% |
!!! | TTTGTTTCTCTTTTCATCTT+CGG | - | chr2_2:70418522-70418541 | Msa0268850:CDS | 25.0% |
! | AATTGGATTCAAAAAAGCGT+AGG | + | chr2_2:70417995-70418014 | None:intergenic | 30.0% |
ACTGGCATAAAATCTACAAT+TGG | + | chr2_2:70418012-70418031 | None:intergenic | 30.0% | |
!! | AAAAAGAGTAAGGGTATTAC+TGG | + | chr2_2:70418030-70418049 | None:intergenic | 30.0% |
GCTAAGAGAAAAAAGAGTAA+GGG | + | chr2_2:70418039-70418058 | None:intergenic | 30.0% | |
AGCTAAGAGAAAAAAGAGTA+AGG | + | chr2_2:70418040-70418059 | None:intergenic | 30.0% | |
!! | AATCAAGATCTAGGTATTGG+TGG | + | chr2_2:70418272-70418291 | None:intergenic | 35.0% |
CACAATCAAGATCTAGGTAT+TGG | + | chr2_2:70418275-70418294 | None:intergenic | 35.0% | |
CAATACCTAGATCTTGATTG+TGG | - | chr2_2:70418273-70418292 | Msa0268850:intron | 35.0% | |
CATATCCACAATCAAGATCT+AGG | + | chr2_2:70418281-70418300 | None:intergenic | 35.0% | |
GAGAATCTATTCTCTTTCTC+TGG | - | chr2_2:70418425-70418444 | Msa0268850:CDS | 35.0% | |
! | TTCAAAAAAGCGTAGGCTTC+AGG | + | chr2_2:70417988-70418007 | None:intergenic | 40.0% |
GGATTCCTATCTAATGATCC+AGG | - | chr2_2:70418543-70418562 | Msa0268850:CDS | 40.0% | |
TACGTCCTGGATCATTAGAT+AGG | + | chr2_2:70418551-70418570 | None:intergenic | 40.0% | |
!! | CAAGATCTAGGTATTGGTGG+TGG | + | chr2_2:70418269-70418288 | None:intergenic | 45.0% |
AATGATCCAGGACGTAATCC+TGG | - | chr2_2:70418555-70418574 | Msa0268850:CDS | 45.0% | |
!!! | AATAAATTCTTAATTTTTTT+CGG | + | chr2_2:70418117-70418136 | None:intergenic | 5.0% |
TCACGTCCAGGATTACGTCC+TGG | + | chr2_2:70418564-70418583 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 70417907 | 70418590 | 70417907 | ID=Msa0268850;Name=Msa0268850 |
chr2_2 | mRNA | 70417907 | 70418590 | 70417907 | ID=Msa0268850-mRNA-1;Parent=Msa0268850;Name=Msa0268850-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
chr2_2 | exon | 70418416 | 70418590 | 70418416 | ID=Msa0268850-mRNA-1:exon:22695;Parent=Msa0268850-mRNA-1 |
chr2_2 | exon | 70417907 | 70418025 | 70417907 | ID=Msa0268850-mRNA-1:exon:22694;Parent=Msa0268850-mRNA-1 |
chr2_2 | CDS | 70418416 | 70418590 | 70418416 | ID=Msa0268850-mRNA-1:cds;Parent=Msa0268850-mRNA-1 |
chr2_2 | CDS | 70417907 | 70418025 | 70417907 | ID=Msa0268850-mRNA-1:cds;Parent=Msa0268850-mRNA-1 |
Gene Sequence |
Protein sequence |