Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268900 | AES88250.1 | 82.500 | 200 | 11 | 4 | 46 | 221 | 7 | 206 | 3.35e-96 | 289 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268900 | sp|P49169|RR18_PEA | 82.727 | 110 | 19 | 0 | 112 | 221 | 1 | 110 | 3.96e-54 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268900 | G7JH54 | 82.500 | 200 | 11 | 4 | 46 | 221 | 7 | 206 | 1.60e-96 | 289 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032040 | Msa0268900 | 0.814228 | 1.714652e-51 | -8.615850e-47 |
| Msa0033650 | Msa0268900 | 0.808227 | 3.434844e-50 | -8.615850e-47 |
| Msa0038310 | Msa0268900 | 0.803628 | 3.184286e-49 | -8.615850e-47 |
| Msa0039200 | Msa0268900 | 0.865693 | 4.908988e-65 | -8.615850e-47 |
| Msa0040190 | Msa0268900 | 0.859669 | 3.523586e-63 | -8.615850e-47 |
| Msa0057740 | Msa0268900 | 0.803022 | 4.250600e-49 | -8.615850e-47 |
| Msa0084550 | Msa0268900 | 0.801449 | 8.958923e-49 | -8.615850e-47 |
| Msa0086820 | Msa0268900 | 0.862750 | 4.061358e-64 | -8.615850e-47 |
| Msa0087880 | Msa0268900 | 0.862917 | 3.607085e-64 | -8.615850e-47 |
| Msa0092750 | Msa0268900 | 0.806433 | 8.247038e-50 | -8.615850e-47 |
| Msa0095140 | Msa0268900 | 0.910491 | 1.764912e-82 | -8.615850e-47 |
| Msa0095200 | Msa0268900 | 0.808211 | 3.462129e-50 | -8.615850e-47 |
| Msa0095240 | Msa0268900 | 0.926600 | 3.751024e-91 | -8.615850e-47 |
| Msa0095270 | Msa0268900 | 0.920295 | 1.534283e-87 | -8.615850e-47 |
| Msa0103060 | Msa0268900 | 0.816104 | 6.566322e-52 | -8.615850e-47 |
| Msa0130120 | Msa0268900 | 0.801280 | 9.699321e-49 | -8.615850e-47 |
| Msa0130620 | Msa0268900 | 0.801773 | 7.687943e-49 | -8.615850e-47 |
| Msa0133670 | Msa0268900 | 0.867658 | 1.163371e-65 | -8.615850e-47 |
| Msa0133880 | Msa0268900 | 0.869989 | 2.047205e-66 | -8.615850e-47 |
| Msa0134550 | Msa0268900 | 0.865782 | 4.601199e-65 | -8.615850e-47 |
| Msa0139740 | Msa0268900 | 0.820177 | 7.872591e-53 | -8.615850e-47 |
| Msa0141670 | Msa0268900 | 0.835775 | 1.379055e-56 | -8.615850e-47 |
| Msa0156780 | Msa0268900 | 0.825892 | 3.657688e-54 | -8.615850e-47 |
| Msa0176530 | Msa0268900 | 0.802315 | 5.946661e-49 | -8.615850e-47 |
| Msa0181290 | Msa0268900 | 0.833814 | 4.296668e-56 | -8.615850e-47 |
| Msa0184120 | Msa0268900 | 0.870850 | 1.068038e-66 | -8.615850e-47 |
| Msa0189050 | Msa0268900 | 0.835051 | 2.100703e-56 | -8.615850e-47 |
| Msa0207530 | Msa0268900 | 0.811073 | 8.400397e-51 | -8.615850e-47 |
| Msa0207900 | Msa0268900 | 0.801453 | 8.942271e-49 | -8.615850e-47 |
| Msa0221860 | Msa0268900 | 0.898148 | 7.042918e-77 | -8.615850e-47 |
| Msa0222070 | Msa0268900 | 0.812969 | 3.244782e-51 | -8.615850e-47 |
| Msa0222120 | Msa0268900 | 0.811518 | 6.726741e-51 | -8.615850e-47 |
| Msa0227290 | Msa0268900 | 0.830988 | 2.153502e-55 | -8.615850e-47 |
| Msa0231310 | Msa0268900 | 0.834445 | 2.985317e-56 | -8.615850e-47 |
| Msa0240290 | Msa0268900 | 0.805695 | 1.178848e-49 | -8.615850e-47 |
| Msa0256170 | Msa0268900 | 0.831342 | 1.763027e-55 | -8.615850e-47 |
| Msa0263620 | Msa0268900 | 0.810777 | 9.738506e-51 | -8.615850e-47 |
| Msa0268180 | Msa0268900 | 0.865258 | 6.728777e-65 | -8.615850e-47 |
| Msa0268220 | Msa0268900 | 0.914625 | 1.539278e-84 | -8.615850e-47 |
| Msa0268340 | Msa0268900 | 0.930797 | 9.693095e-94 | -8.615850e-47 |
| Msa0268380 | Msa0268900 | 0.824476 | 7.908740e-54 | -8.615850e-47 |
| Msa0268420 | Msa0268900 | 0.869252 | 3.559390e-66 | -8.615850e-47 |
| Msa0268460 | Msa0268900 | 0.949540 | 1.035383e-107 | -8.615850e-47 |
| Msa0268500 | Msa0268900 | 0.933933 | 8.794390e-96 | -8.615850e-47 |
| Msa0268540 | Msa0268900 | 0.850911 | 1.249691e-60 | -8.615850e-47 |
| Msa0268650 | Msa0268900 | 0.863244 | 2.858125e-64 | -8.615850e-47 |
| Msa0268680 | Msa0268900 | 0.943921 | 5.020560e-103 | -8.615850e-47 |
| Msa0268690 | Msa0268900 | 0.926076 | 7.702450e-91 | -8.615850e-47 |
| Msa0268730 | Msa0268900 | 0.825976 | 3.494339e-54 | -8.615850e-47 |
| Msa0268760 | Msa0268900 | 0.809832 | 1.557048e-50 | -8.615850e-47 |
| Msa0268850 | Msa0268900 | 0.855431 | 6.337489e-62 | -8.615850e-47 |
| Msa0268890 | Msa0268900 | 0.810497 | 1.119496e-50 | -8.615850e-47 |
| Msa0268900 | Msa0268930 | 0.833673 | 4.659921e-56 | -8.615850e-47 |
| Msa0268900 | Msa0269060 | 0.848307 | 6.663527e-60 | -8.615850e-47 |
| Msa0268900 | Msa0269100 | 0.947270 | 9.311557e-106 | -8.615850e-47 |
| Msa0268900 | Msa0295520 | 0.803809 | 2.919470e-49 | -8.615850e-47 |
| Msa0268900 | Msa0301460 | 0.802480 | 5.499664e-49 | -8.615850e-47 |
| Msa0268900 | Msa0306130 | 0.845904 | 3.034776e-59 | -8.615850e-47 |
| Msa0268900 | Msa0309160 | 0.833939 | 3.997217e-56 | -8.615850e-47 |
| Msa0268900 | Msa0330270 | 0.816108 | 6.553984e-52 | -8.615850e-47 |
| Msa0268900 | Msa0331780 | 0.807572 | 4.733319e-50 | -8.615850e-47 |
| Msa0268900 | Msa0336270 | 0.814108 | 1.822454e-51 | -8.615850e-47 |
| Msa0268900 | Msa0338570 | 0.803185 | 3.932748e-49 | -8.615850e-47 |
| Msa0268900 | Msa0338900 | 0.825868 | 3.706607e-54 | -8.615850e-47 |
| Msa0268900 | Msa0344200 | 0.839950 | 1.166189e-57 | -8.615850e-47 |
| Msa0268900 | Msa0344240 | 0.902989 | 5.507617e-79 | -8.615850e-47 |
| Msa0268900 | Msa0344250 | 0.897932 | 8.698033e-77 | -8.615850e-47 |
| Msa0268900 | Msa0369750 | 0.816713 | 4.798974e-52 | -8.615850e-47 |
| Msa0268900 | Msa0398610 | 0.833869 | 4.162964e-56 | -8.615850e-47 |
| Msa0268900 | Msa0398620 | 0.804705 | 1.900349e-49 | -8.615850e-47 |
| Msa0268900 | Msa0417150 | 0.801733 | 7.833811e-49 | -8.615850e-47 |
| Msa0268900 | Msa0418000 | 0.809024 | 2.321046e-50 | -8.615850e-47 |
| Msa0268900 | Msa0423600 | 0.831521 | 1.592251e-55 | -8.615850e-47 |
| Msa0268900 | Msa0427050 | 0.839938 | 1.174675e-57 | -8.615850e-47 |
| Msa0268900 | Msa0449900 | 0.882832 | 7.479561e-71 | -8.615850e-47 |
| Msa0268900 | Msa0449930 | 0.814673 | 1.366528e-51 | -8.615850e-47 |
| Msa0268900 | Msa0456480 | 0.816313 | 5.899300e-52 | -8.615850e-47 |
| Msa0268900 | Msa0459120 | 0.820667 | 6.076574e-53 | -8.615850e-47 |
| Msa0268900 | Msa0463960 | 0.808674 | 2.757280e-50 | -8.615850e-47 |
| Msa0268900 | Msa0470650 | 0.816086 | 6.628080e-52 | -8.615850e-47 |
| Msa0268900 | Msa0471090 | 0.821209 | 4.560374e-53 | -8.615850e-47 |
| Msa0268900 | Msa0473450 | 0.832437 | 9.455972e-56 | -8.615850e-47 |
| Msa0268900 | Msa0475360 | 0.806434 | 8.242972e-50 | -8.615850e-47 |
| Msa0268900 | Msa0475830 | 0.859674 | 3.512497e-63 | -8.615850e-47 |
| Msa0268900 | Msa0482580 | 0.801644 | 8.169296e-49 | -8.615850e-47 |
| Msa0268900 | Msa0505660 | 0.806717 | 7.182916e-50 | -8.615850e-47 |
| Msa0268900 | Msa0509510 | 0.811590 | 6.488345e-51 | -8.615850e-47 |
| Msa0268900 | Msa0515680 | 0.810830 | 9.482224e-51 | -8.615850e-47 |
| Msa0268900 | Msa0558890 | 0.823038 | 1.717652e-53 | -8.615850e-47 |
| Msa0268900 | Msa0568490 | 0.806425 | 8.277427e-50 | -8.615850e-47 |
| Msa0268900 | Msa0582530 | 0.823688 | 1.210388e-53 | -8.615850e-47 |
| Msa0268900 | Msa0582570 | 0.924092 | 1.116816e-89 | -8.615850e-47 |
| Msa0268900 | Msa0582580 | 0.923329 | 3.064909e-89 | -8.615850e-47 |
| Msa0268900 | Msa0582620 | 0.844072 | 9.478405e-59 | -8.615850e-47 |
| Msa0268900 | Msa0582710 | 0.825242 | 5.214603e-54 | -8.615850e-47 |
| Msa0268900 | Msa0582740 | 0.854866 | 9.251969e-62 | -8.615850e-47 |
| Msa0268900 | Msa0582830 | 0.838486 | 2.795114e-57 | -8.615850e-47 |
| Msa0268900 | Msa0582900 | 0.824327 | 8.570117e-54 | -8.615850e-47 |
| Msa0268900 | Msa0587060 | 0.802374 | 5.782386e-49 | -8.615850e-47 |
| Msa0268900 | Msa0591370 | 0.827091 | 1.894449e-54 | -8.615850e-47 |
| Msa0268900 | Msa0595780 | 0.815348 | 9.678216e-52 | -8.615850e-47 |
| Msa0268900 | Msa0598250 | 0.816424 | 5.569230e-52 | -8.615850e-47 |
| Msa0268900 | Msa0601780 | 0.805584 | 1.244217e-49 | -8.615850e-47 |
| Msa0268900 | Msa0606060 | 0.817468 | 3.246391e-52 | -8.615850e-47 |
| Msa0268900 | Msa0606680 | 0.828867 | 7.082130e-55 | -8.615850e-47 |
| Msa0268900 | Msa0619060 | 0.810079 | 1.377904e-50 | -8.615850e-47 |
| Msa0268900 | Msa0619330 | 0.812066 | 5.111500e-51 | -8.615850e-47 |
| Msa0268900 | Msa0626890 | 0.812708 | 3.701433e-51 | -8.615850e-47 |
| Msa0268900 | Msa0635350 | 0.811787 | 5.878151e-51 | -8.615850e-47 |
| Msa0268900 | Msa0635990 | 0.839819 | 1.261512e-57 | -8.615850e-47 |
| Msa0268900 | Msa0638040 | 0.806307 | 8.767140e-50 | -8.615850e-47 |
| Msa0268900 | Msa0653710 | 0.823573 | 1.287900e-53 | -8.615850e-47 |
| Msa0268900 | Msa0654060 | 0.806594 | 7.624333e-50 | -8.615850e-47 |
| Msa0268900 | Msa0659130 | 0.812287 | 4.574530e-51 | -8.615850e-47 |
| Msa0268900 | Msa0662850 | 0.817739 | 2.820138e-52 | -8.615850e-47 |
| Msa0268900 | Msa0665040 | 0.800303 | 1.535466e-48 | -8.615850e-47 |
| Msa0268900 | Msa0668630 | 0.887812 | 1.027110e-72 | -8.615850e-47 |
| Msa0268900 | Msa0672350 | 0.812852 | 3.441192e-51 | -8.615850e-47 |
| Msa0268900 | Msa0686610 | 0.815929 | 7.184118e-52 | -8.615850e-47 |
| Msa0268900 | Msa0687320 | 0.805055 | 1.605446e-49 | -8.615850e-47 |
| Msa0268900 | Msa0705610 | 0.803975 | 2.697097e-49 | -8.615850e-47 |
| Msa0268900 | Msa0706710 | 0.830448 | 2.919761e-55 | -8.615850e-47 |
| Msa0268900 | Msa0714020 | 0.805304 | 1.423712e-49 | -8.615850e-47 |
| Msa0268900 | Msa0714160 | 0.804756 | 1.853847e-49 | -8.615850e-47 |
| Msa0268900 | Msa0727020 | 0.839695 | 1.358663e-57 | -8.615850e-47 |
| Msa0268900 | Msa0727040 | 0.825374 | 4.855065e-54 | -8.615850e-47 |
| Msa0268900 | Msa0736330 | 0.805101 | 1.570199e-49 | -8.615850e-47 |
| Msa0268900 | Msa0736930 | 0.817646 | 2.959765e-52 | -8.615850e-47 |
| Msa0268900 | Msa0739570 | 0.833369 | 5.547558e-56 | -8.615850e-47 |
| Msa0268900 | Msa0739610 | 0.802088 | 6.622985e-49 | -8.615850e-47 |
| Msa0268900 | Msa0744450 | 0.808274 | 3.357090e-50 | -8.615850e-47 |
| Msa0268900 | Msa0766880 | 0.839856 | 1.233881e-57 | -8.615850e-47 |
| Msa0268900 | Msa0772210 | 0.863638 | 2.158555e-64 | -8.615850e-47 |
| Msa0268900 | Msa0778060 | 0.815523 | 8.851363e-52 | -8.615850e-47 |
| Msa0268900 | Msa0782330 | 0.829611 | 4.672571e-55 | -8.615850e-47 |
| Msa0268900 | Msa0793060 | 0.800440 | 1.439562e-48 | -8.615850e-47 |
| Msa0268900 | Msa0796450 | 0.808686 | 2.742030e-50 | -8.615850e-47 |
| Msa0268900 | Msa0801390 | 0.831634 | 1.493411e-55 | -8.615850e-47 |
| Msa0268900 | Msa0804930 | 0.818121 | 2.312620e-52 | -8.615850e-47 |
| Msa0268900 | Msa0815950 | 0.805155 | 1.530112e-49 | -8.615850e-47 |
| Msa0268900 | Msa0839730 | 0.833182 | 6.178320e-56 | -8.615850e-47 |
| Msa0268900 | Msa0841980 | 0.806493 | 8.010318e-50 | -8.615850e-47 |
| Msa0268900 | Msa0855490 | 0.814302 | 1.650899e-51 | -8.615850e-47 |
| Msa0268900 | Msa0860270 | 0.847399 | 1.185472e-59 | -8.615850e-47 |
| Msa0268900 | Msa0864950 | 0.802608 | 5.174705e-49 | -8.615850e-47 |
| Msa0268900 | Msa0887000 | 0.801106 | 1.053076e-48 | -8.615850e-47 |
| Msa0268900 | Msa0924820 | 0.899787 | 1.401908e-77 | -8.615850e-47 |
| Msa0268900 | Msa0924890 | 0.806494 | 8.004912e-50 | -8.615850e-47 |
| Msa0268900 | Msa0924970 | 0.883261 | 5.212481e-71 | -8.615850e-47 |
| Msa0268900 | Msa0925020 | 0.913353 | 6.787188e-84 | -8.615850e-47 |
| Msa0268900 | Msa0930990 | 0.876466 | 1.365920e-68 | -8.615850e-47 |
| Msa0268900 | Msa0931090 | 0.838868 | 2.226664e-57 | -8.615850e-47 |
| Msa0268900 | Msa0931150 | 0.837192 | 6.009914e-57 | -8.615850e-47 |
| Msa0268900 | Msa0931280 | 0.849755 | 2.637734e-60 | -8.615850e-47 |
| Msa0268900 | Msa0978000 | 0.818147 | 2.281644e-52 | -8.615850e-47 |
| Msa0268900 | Msa0983670 | 0.881738 | 1.869850e-70 | -8.615850e-47 |
| Msa0268900 | Msa1016130 | 0.823071 | 1.687636e-53 | -8.615850e-47 |
| Msa0268900 | Msa1024580 | 0.822404 | 2.412339e-53 | -8.615850e-47 |
| Msa0268900 | Msa1030280 | 0.814604 | 1.415689e-51 | -8.615850e-47 |
| Msa0268900 | Msa1033160 | 0.813208 | 2.875691e-51 | -8.615850e-47 |
| Msa0268900 | Msa1036350 | 0.807535 | 4.821173e-50 | -8.615850e-47 |
| Msa0268900 | Msa1049440 | 0.826935 | 2.063842e-54 | -8.615850e-47 |
| Msa0268900 | Msa1063180 | 0.814203 | 1.736253e-51 | -8.615850e-47 |
| Msa0268900 | Msa1070930 | 0.800855 | 1.184955e-48 | -8.615850e-47 |
| Msa0268900 | Msa1076630 | 0.803115 | 4.065601e-49 | -8.615850e-47 |
| Msa0268900 | Msa1079610 | 0.862040 | 6.715126e-64 | -8.615850e-47 |
| Msa0268900 | Msa1081600 | 0.814727 | 1.329376e-51 | -8.615850e-47 |
| Msa0268900 | Msa1086020 | 0.942938 | 2.952148e-102 | -8.615850e-47 |
| Msa0268900 | Msa1086060 | 0.857065 | 2.103062e-62 | -8.615850e-47 |
| Msa0268900 | Msa1086160 | 0.849606 | 2.903760e-60 | -8.615850e-47 |
| Msa0268900 | Msa1086170 | 0.835595 | 1.531127e-56 | -8.615850e-47 |
| Msa0268900 | Msa1086260 | 0.839079 | 1.964060e-57 | -8.615850e-47 |
| Msa0268900 | Msa1086290 | 0.855425 | 6.365417e-62 | -8.615850e-47 |
| Msa0268900 | Msa1086330 | 0.923210 | 3.582999e-89 | -8.615850e-47 |
| Msa0268900 | Msa1086340 | 0.938323 | 8.131172e-99 | -8.615850e-47 |
| Msa0268900 | Msa1086370 | 0.869450 | 3.069292e-66 | -8.615850e-47 |
| Msa0268900 | Msa1086410 | 0.925095 | 2.915307e-90 | -8.615850e-47 |
| Msa0268900 | Msa1086440 | 0.849300 | 3.533398e-60 | -8.615850e-47 |
| Msa0268900 | Msa1086480 | 0.817066 | 3.997885e-52 | -8.615850e-47 |
| Msa0268900 | Msa1086520 | 0.947117 | 1.252986e-105 | -8.615850e-47 |
| Msa0268900 | Msa1086630 | 0.927487 | 1.096999e-91 | -8.615850e-47 |
| Msa0268900 | Msa1086690 | 0.936475 | 1.637517e-97 | -8.615850e-47 |
| Msa0268900 | Msa1086830 | 0.912219 | 2.502517e-83 | -8.615850e-47 |
| Msa0268900 | Msa1086870 | 0.847391 | 1.191206e-59 | -8.615850e-47 |
| Msa0268900 | Msa1087000 | 0.934031 | 7.568440e-96 | -8.615850e-47 |
| Msa0268900 | Msa1091690 | 0.822573 | 2.203334e-53 | -8.615850e-47 |
| Msa0268900 | Msa1102180 | 0.811541 | 6.649617e-51 | -8.615850e-47 |
| Msa0268900 | Msa1108530 | 0.825831 | 3.783463e-54 | -8.615850e-47 |
| Msa0268900 | Msa1115580 | 0.814862 | 1.241304e-51 | -8.615850e-47 |
| Msa0268900 | Msa1120540 | 0.812411 | 4.297224e-51 | -8.615850e-47 |
| Msa0268900 | Msa1123340 | 0.826828 | 2.189722e-54 | -8.615850e-47 |
| Msa0268900 | Msa1124440 | 0.849277 | 3.585621e-60 | -8.615850e-47 |
| Msa0268900 | Msa1126910 | 0.822057 | 2.904332e-53 | -8.615850e-47 |
| Msa0268900 | Msa1130070 | 0.811097 | 8.301196e-51 | -8.615850e-47 |
| Msa0268900 | Msa1130700 | 0.803373 | 3.596392e-49 | -8.615850e-47 |
| Msa0268900 | Msa1138600 | 0.805784 | 1.129182e-49 | -8.615850e-47 |
| Msa0268900 | Msa1143140 | 0.838908 | 2.173900e-57 | -8.615850e-47 |
| Msa0268900 | Msa1152280 | 0.824356 | 8.435871e-54 | -8.615850e-47 |
| Msa0268900 | Msa1157160 | 0.855419 | 6.387509e-62 | -8.615850e-47 |
| Msa0268900 | Msa1161160 | 0.835358 | 1.757879e-56 | -8.615850e-47 |
| Msa0268900 | Msa1166180 | 0.812154 | 4.890212e-51 | -8.615850e-47 |
| Msa0268900 | Msa1166280 | 0.817347 | 3.456101e-52 | -8.615850e-47 |
| Msa0268900 | Msa1166370 | 0.818304 | 2.101827e-52 | -8.615850e-47 |
| Msa0268900 | Msa1168130 | 0.839838 | 1.246990e-57 | -8.615850e-47 |
| Msa0268900 | Msa1173410 | 0.801095 | 1.058234e-48 | -8.615850e-47 |
| Msa0268900 | Msa1199690 | 0.812176 | 4.837338e-51 | -8.615850e-47 |
| Msa0268900 | Msa1204120 | 0.810149 | 1.330346e-50 | -8.615850e-47 |
| Msa0268900 | Msa1208070 | 0.800206 | 1.606928e-48 | -8.615850e-47 |
| Msa0268900 | Msa1209650 | 0.806411 | 8.333428e-50 | -8.615850e-47 |
| Msa0268900 | Msa1211880 | 0.837129 | 6.236481e-57 | -8.615850e-47 |
| Msa0268900 | Msa1214900 | 0.806899 | 6.572925e-50 | -8.615850e-47 |
| Msa0268900 | Msa1226600 | 0.802664 | 5.039025e-49 | -8.615850e-47 |
| Msa0268900 | Msa1231520 | 0.804132 | 2.501183e-49 | -8.615850e-47 |
| Msa0268900 | Msa1233770 | 0.809985 | 1.443147e-50 | -8.615850e-47 |
| Msa0268900 | Msa1246420 | 0.827468 | 1.538474e-54 | -8.615850e-47 |
| Msa0268900 | Msa1252040 | 0.829108 | 6.188548e-55 | -8.615850e-47 |
| Msa0268900 | Msa1276080 | 0.807658 | 4.539926e-50 | -8.615850e-47 |
| Msa0268900 | Msa1280020 | 0.823251 | 1.531815e-53 | -8.615850e-47 |
| Msa0268900 | Msa1287160 | 0.820707 | 5.949910e-53 | -8.615850e-47 |
| Msa0268900 | Msa1287340 | 0.817738 | 2.822428e-52 | -8.615850e-47 |
| Msa0268900 | Msa1298740 | 0.811637 | 6.337789e-51 | -8.615850e-47 |
| Msa0268900 | Msa1309910 | 0.804386 | 2.214681e-49 | -8.615850e-47 |
| Msa0268900 | Msa1325980 | 0.807781 | 4.273972e-50 | -8.615850e-47 |
| Msa0268900 | Msa1327820 | 0.815266 | 1.009665e-51 | -8.615850e-47 |
| Msa0268900 | Msa1332180 | 0.803710 | 3.061523e-49 | -8.615850e-47 |
| Msa0268900 | Msa1354850 | 0.934620 | 3.045631e-96 | -8.615850e-47 |
| Msa0268900 | Msa1354890 | 0.825839 | 3.766224e-54 | -8.615850e-47 |
| Msa0268900 | Msa1355020 | 0.922078 | 1.568200e-88 | -8.615850e-47 |
| Msa0268900 | Msa1355060 | 0.836965 | 6.868860e-57 | -8.615850e-47 |
| Msa0268900 | Msa1355260 | 0.837946 | 3.848872e-57 | -8.615850e-47 |
| Msa0268900 | Msa1371250 | 0.830929 | 2.225995e-55 | -8.615850e-47 |
| Msa0268900 | Msa1379370 | 0.818612 | 1.789553e-52 | -8.615850e-47 |
| Msa0268900 | Msa1380540 | 0.899275 | 2.328531e-77 | -8.615850e-47 |
| Msa0268900 | Msa1385450 | 0.864954 | 8.385132e-65 | -8.615850e-47 |
| Msa0268900 | Msa1385940 | 0.836409 | 9.515701e-57 | -8.615850e-47 |
| Msa0268900 | Msa1387090 | 0.840713 | 7.369040e-58 | -8.615850e-47 |
| Msa0268900 | Msa1388230 | 0.802432 | 5.626015e-49 | -8.615850e-47 |
| Msa0268900 | Msa1390410 | 0.835974 | 1.227316e-56 | -8.615850e-47 |
| Msa0268900 | Msa1393600 | 0.801158 | 1.027412e-48 | -8.615850e-47 |
| Msa0268900 | Msa1394090 | 0.917813 | 3.359513e-86 | -8.615850e-47 |
| Msa0268900 | Msa1394100 | 0.926386 | 5.035763e-91 | -8.615850e-47 |
| Msa0268900 | Msa1394140 | 0.804985 | 1.660595e-49 | -8.615850e-47 |
| Msa0268900 | Msa1394170 | 0.821718 | 3.477858e-53 | -8.615850e-47 |
| Msa0268900 | Msa1394280 | 0.916194 | 2.387749e-85 | -8.615850e-47 |
| Msa0268900 | Msa1400600 | 0.827856 | 1.241271e-54 | -8.615850e-47 |
| Msa0268900 | Msa1405180 | 0.816315 | 5.890615e-52 | -8.615850e-47 |
| Msa0268900 | Msa1407710 | 0.800604 | 1.333270e-48 | -8.615850e-47 |
| Msa0268900 | Msa1408190 | 0.800029 | 1.745837e-48 | -8.615850e-47 |
| Msa0268900 | Msa1415120 | 0.852075 | 5.855252e-61 | -8.615850e-47 |
| Msa0268900 | Msa1422750 | 0.822643 | 2.122496e-53 | -8.615850e-47 |
| Msa0268900 | Msa1428440 | 0.831624 | 1.501885e-55 | -8.615850e-47 |
| Msa0268900 | Msa1435470 | 0.801551 | 8.536198e-49 | -8.615850e-47 |
| Msa0268900 | Msa1439160 | 0.827005 | 1.986084e-54 | -8.615850e-47 |
| Msa0268900 | Msa1448990 | 0.800558 | 1.362066e-48 | -8.615850e-47 |
| Msa0268900 | Msa1450420 | 0.828205 | 1.023479e-54 | -8.615850e-47 |
| Msa0268900 | Msa1466170 | 0.818805 | 1.618305e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268900 | MtrunA17_Chr4g0015801 | 81.301 | 123 | 10 | 3 | 112 | 221 | 1 | 123 | 1.10e-49 | 158 |
| Msa0268900 | MtrunA17_CPg0492771 | 81.301 | 123 | 10 | 3 | 112 | 221 | 1 | 123 | 1.10e-49 | 158 |
| Msa0268900 | MtrunA17_Chr6g0466591 | 88.889 | 90 | 6 | 1 | 112 | 197 | 1 | 90 | 8.58e-48 | 153 |
| Msa0268900 | MtrunA17_Chr4g0016891 | 86.957 | 92 | 8 | 2 | 112 | 199 | 1 | 92 | 7.53e-45 | 145 |
| Msa0268900 | MtrunA17_Chr7g0237831 | 94.667 | 75 | 2 | 1 | 112 | 184 | 1 | 75 | 1.37e-40 | 133 |
| Msa0268900 | MtrunA17_CPg0492781 | 98.182 | 55 | 1 | 0 | 46 | 100 | 7 | 61 | 1.21e-34 | 118 |
| Msa0268900 | MtrunA17_Chr4g0015791 | 98.182 | 55 | 1 | 0 | 46 | 100 | 7 | 61 | 1.21e-34 | 118 |
| Msa0268900 | MtrunA17_Chr8g0355601 | 96.364 | 55 | 2 | 0 | 46 | 100 | 7 | 61 | 5.97e-34 | 116 |
| Msa0268900 | MtrunA17_Chr6g0465781 | 96.610 | 59 | 2 | 0 | 112 | 170 | 1 | 59 | 6.67e-33 | 113 |
| Msa0268900 | MtrunA17_Chr7g0224991 | 97.368 | 38 | 1 | 0 | 62 | 99 | 6 | 43 | 1.84e-21 | 83.6 |
| Msa0268900 | MtrunA17_CPg0492791 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.99e-14 | 65.1 |
| Msa0268900 | MtrunA17_Chr4g0015781 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.99e-14 | 65.1 |
| Msa0268900 | MtrunA17_Chr4g0028951 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.99e-14 | 65.1 |
| Msa0268900 | MtrunA17_Chr8g0355611 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.99e-14 | 65.1 |
| Msa0268900 | MtrunA17_Chr4g0016881 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 3.10e-14 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0268900 | ATCG00650.1 | 70.909 | 110 | 23 | 2 | 112 | 221 | 1 | 101 | 3.58e-43 | 141 |
| Msa0268900 | ATCG00640.1 | 74.545 | 55 | 14 | 0 | 46 | 100 | 7 | 61 | 3.47e-26 | 96.7 |
| Msa0268900 | ATCG00630.1 | 84.375 | 32 | 5 | 0 | 15 | 46 | 1 | 32 | 5.76e-12 | 58.9 |
Find 21 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACGAATAACTGTTATTT+TGG | 0.125276 | 2_2:-70443058 | Msa0268900:CDS |
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | 2_2:-70443014 | Msa0268900:CDS |
| AATCGTATGTTTGCAACAAA+AGG | 0.396841 | 2_2:+70442918 | None:intergenic |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | 2_2:-70443683 | Msa0268900:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | 2_2:-70443013 | Msa0268900:CDS |
| AGTTTGTCCCCGATCCAATC+GGG | 0.455483 | 2_2:-70442618 | Msa0268900:CDS |
| GAGTTTGTCCCCGATCCAAT+CGG | 0.465376 | 2_2:-70442619 | Msa0268900:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | 2_2:-70443666 | Msa0268900:CDS |
| AAAGGTGACGAATTAACAAA+AGG | 0.521079 | 2_2:+70442444 | None:intergenic |
| ACACAATACACCTAGTCGAT+TGG | 0.524208 | 2_2:-70442959 | Msa0268900:CDS |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | 2_2:-70443676 | Msa0268900:CDS |
| ATCGTATGTTTGCAACAAAA+GGG | 0.538893 | 2_2:+70442919 | None:intergenic |
| TTTCTCAATTCCAATCGACT+AGG | 0.574270 | 2_2:+70442949 | None:intergenic |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | 2_2:-70443697 | Msa0268900:CDS |
| GAGTCGCTTAGATTTATCCA+TGG | 0.585856 | 2_2:+70442671 | None:intergenic |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | 2_2:+70443681 | None:intergenic |
| GTATAGGAATAAACAAACCA+TGG | 0.629025 | 2_2:-70442688 | Msa0268900:CDS |
| TATCGACTTATTAGTCAACA+AGG | 0.637963 | 2_2:-70442561 | Msa0268900:CDS |
| GTTTGTCCCCGATCCAATCG+GGG | 0.647747 | 2_2:-70442617 | Msa0268900:CDS |
| TTTGTCCCCGATCCAATCGG+GGG | 0.661952 | 2_2:-70442616 | Msa0268900:CDS |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | 2_2:-70443012 | Msa0268900:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACTAGAATCAAAAAAA+GGG | + | chr2_2:70442520-70442539 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr2_2:70442643-70442662 | Msa0268900:CDS | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr2_2:70442737-70442756 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr2_2:70442893-70442912 | Msa0268900:intron | 15.0% |
| !!! | AATCCTTTTTTTATAAGAAA+TGG | - | chr2_2:70443396-70443415 | Msa0268900:intron | 15.0% |
| !!! | ATCCTTTTTTTATAAGAAAT+GGG | - | chr2_2:70443397-70443416 | Msa0268900:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | + | chr2_2:70443692-70443711 | None:intergenic | 15.0% |
| !! | AATAACTAGAATCAAAAAAA+GGG | + | chr2_2:70442520-70442539 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr2_2:70442643-70442662 | Msa0268900:CDS | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr2_2:70442737-70442756 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr2_2:70442893-70442912 | Msa0268900:intron | 15.0% |
| !!! | AATCCTTTTTTTATAAGAAA+TGG | - | chr2_2:70443396-70443415 | Msa0268900:intron | 15.0% |
| !!! | ATCCTTTTTTTATAAGAAAT+GGG | - | chr2_2:70443397-70443416 | Msa0268900:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | + | chr2_2:70443692-70443711 | None:intergenic | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr2_2:70442369-70442388 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr2_2:70442368-70442387 | Msa0268900:CDS | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | chr2_2:70442521-70442540 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | chr2_2:70442519-70442538 | Msa0268900:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr2_2:70442574-70442593 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr2_2:70442646-70442665 | Msa0268900:CDS | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr2_2:70442652-70442671 | Msa0268900:CDS | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr2_2:70442768-70442787 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr2_2:70443057-70443076 | Msa0268900:CDS | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr2_2:70443093-70443112 | Msa0268900:intron | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | - | chr2_2:70443227-70443246 | Msa0268900:intron | 20.0% |
| !! | ATCCCATTTCTTATAAAAAA+AGG | + | chr2_2:70443402-70443421 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | - | chr2_2:70443405-70443424 | Msa0268900:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | + | chr2_2:70443612-70443631 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTAGAACAGTAGT+AGG | + | chr2_2:70443749-70443768 | None:intergenic | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr2_2:70442369-70442388 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr2_2:70442368-70442387 | Msa0268900:CDS | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | chr2_2:70442521-70442540 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | chr2_2:70442519-70442538 | Msa0268900:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr2_2:70442574-70442593 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr2_2:70442646-70442665 | Msa0268900:CDS | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr2_2:70442652-70442671 | Msa0268900:CDS | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr2_2:70442768-70442787 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr2_2:70443057-70443076 | Msa0268900:CDS | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr2_2:70443093-70443112 | Msa0268900:intron | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | - | chr2_2:70443227-70443246 | Msa0268900:intron | 20.0% |
| !! | ATCCCATTTCTTATAAAAAA+AGG | + | chr2_2:70443402-70443421 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | - | chr2_2:70443405-70443424 | Msa0268900:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | + | chr2_2:70443612-70443631 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTAGAACAGTAGT+AGG | + | chr2_2:70443749-70443768 | None:intergenic | 20.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr2_2:70442591-70442610 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr2_2:70442592-70442611 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr2_2:70442772-70442791 | Msa0268900:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr2_2:70442773-70442792 | Msa0268900:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr2_2:70443011-70443030 | Msa0268900:CDS | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | + | chr2_2:70443268-70443287 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | + | chr2_2:70443269-70443288 | None:intergenic | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr2_2:70442591-70442610 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr2_2:70442592-70442611 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr2_2:70442772-70442791 | Msa0268900:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr2_2:70442773-70442792 | Msa0268900:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr2_2:70443011-70443030 | Msa0268900:CDS | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | + | chr2_2:70443268-70443287 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | + | chr2_2:70443269-70443288 | None:intergenic | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr2_2:70442371-70442390 | Msa0268900:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr2_2:70442409-70442428 | Msa0268900:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr2_2:70442481-70442500 | Msa0268900:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr2_2:70442524-70442543 | Msa0268900:CDS | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr2_2:70442678-70442697 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr2_2:70442752-70442771 | Msa0268900:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr2_2:70442776-70442795 | Msa0268900:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr2_2:70443014-70443033 | Msa0268900:CDS | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr2_2:70443047-70443066 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr2_2:70443101-70443120 | Msa0268900:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr2_2:70443102-70443121 | Msa0268900:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr2_2:70443103-70443122 | Msa0268900:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr2_2:70443199-70443218 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr2_2:70443200-70443219 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | - | chr2_2:70443427-70443446 | Msa0268900:intron | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | - | chr2_2:70443474-70443493 | Msa0268900:intron | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | - | chr2_2:70443554-70443573 | Msa0268900:intron | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | + | chr2_2:70443674-70443693 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr2_2:70442371-70442390 | Msa0268900:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr2_2:70442409-70442428 | Msa0268900:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr2_2:70442481-70442500 | Msa0268900:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr2_2:70442524-70442543 | Msa0268900:CDS | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr2_2:70442678-70442697 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr2_2:70442752-70442771 | Msa0268900:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr2_2:70442776-70442795 | Msa0268900:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr2_2:70443014-70443033 | Msa0268900:CDS | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr2_2:70443047-70443066 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr2_2:70443101-70443120 | Msa0268900:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr2_2:70443102-70443121 | Msa0268900:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr2_2:70443103-70443122 | Msa0268900:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr2_2:70443199-70443218 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr2_2:70443200-70443219 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | - | chr2_2:70443427-70443446 | Msa0268900:intron | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | - | chr2_2:70443474-70443493 | Msa0268900:intron | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | - | chr2_2:70443554-70443573 | Msa0268900:intron | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | + | chr2_2:70443674-70443693 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr2_2:70442681-70442700 | Msa0268900:CDS | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr2_2:70442701-70442720 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr2_2:70442702-70442721 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr2_2:70442777-70442796 | Msa0268900:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr2_2:70442972-70442991 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr2_2:70443021-70443040 | Msa0268900:CDS | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr2_2:70443169-70443188 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | - | chr2_2:70443411-70443430 | Msa0268900:intron | 35.0% |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr2_2:70442681-70442700 | Msa0268900:CDS | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr2_2:70442701-70442720 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr2_2:70442702-70442721 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr2_2:70442777-70442796 | Msa0268900:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr2_2:70442972-70442991 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr2_2:70443021-70443040 | Msa0268900:CDS | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr2_2:70443169-70443188 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | - | chr2_2:70443411-70443430 | Msa0268900:intron | 35.0% |
| AAAGGGAATGTCAATGCATC+CGG | + | chr2_2:70442503-70442522 | None:intergenic | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr2_2:70442668-70442687 | Msa0268900:CDS | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr2_2:70442690-70442709 | Msa0268900:CDS | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr2_2:70443156-70443175 | Msa0268900:intron | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | - | chr2_2:70443250-70443269 | Msa0268900:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | + | chr2_2:70443447-70443466 | None:intergenic | 40.0% | |
| AAAGGGAATGTCAATGCATC+CGG | + | chr2_2:70442503-70442522 | None:intergenic | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr2_2:70442668-70442687 | Msa0268900:CDS | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr2_2:70442690-70442709 | Msa0268900:CDS | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr2_2:70443156-70443175 | Msa0268900:intron | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | - | chr2_2:70443250-70443269 | Msa0268900:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | + | chr2_2:70443447-70443466 | None:intergenic | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr2_2:70442437-70442456 | None:intergenic | 45.0% |
| AAGGGAATGTCAATGCATCC+GGG | + | chr2_2:70442502-70442521 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr2_2:70442529-70442548 | Msa0268900:CDS | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr2_2:70442530-70442549 | Msa0268900:CDS | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | + | chr2_2:70443514-70443533 | None:intergenic | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr2_2:70442437-70442456 | None:intergenic | 45.0% |
| AAGGGAATGTCAATGCATCC+GGG | + | chr2_2:70442502-70442521 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr2_2:70442529-70442548 | Msa0268900:CDS | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr2_2:70442530-70442549 | Msa0268900:CDS | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | + | chr2_2:70443514-70443533 | None:intergenic | 45.0% | |
| !!! | ATATTTATATTTGTTATATA+AGG | + | chr2_2:70443341-70443360 | None:intergenic | 5.0% |
| !!! | ATATTTATATTTGTTATATA+AGG | + | chr2_2:70443341-70443360 | None:intergenic | 5.0% |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr2_2:70442418-70442437 | Msa0268900:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr2_2:70442432-70442451 | Msa0268900:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr2_2:70442439-70442458 | Msa0268900:CDS | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr2_2:70442531-70442550 | Msa0268900:CDS | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr2_2:70443028-70443047 | Msa0268900:CDS | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | - | chr2_2:70443253-70443272 | Msa0268900:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | - | chr2_2:70443496-70443515 | Msa0268900:intron | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | - | chr2_2:70443497-70443516 | Msa0268900:intron | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | + | chr2_2:70443509-70443528 | None:intergenic | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr2_2:70442418-70442437 | Msa0268900:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr2_2:70442432-70442451 | Msa0268900:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr2_2:70442439-70442458 | Msa0268900:CDS | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr2_2:70442531-70442550 | Msa0268900:CDS | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr2_2:70443028-70443047 | Msa0268900:CDS | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | - | chr2_2:70443253-70443272 | Msa0268900:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | - | chr2_2:70443496-70443515 | Msa0268900:intron | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | - | chr2_2:70443497-70443516 | Msa0268900:intron | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | + | chr2_2:70443509-70443528 | None:intergenic | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr2_2:70442449-70442468 | Msa0268900:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr2_2:70443030-70443049 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr2_2:70443027-70443046 | Msa0268900:CDS | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | - | chr2_2:70443498-70443517 | Msa0268900:intron | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | - | chr2_2:70443499-70443518 | Msa0268900:intron | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | + | chr2_2:70443508-70443527 | None:intergenic | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr2_2:70442449-70442468 | Msa0268900:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr2_2:70443030-70443049 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr2_2:70443027-70443046 | Msa0268900:CDS | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | - | chr2_2:70443498-70443517 | Msa0268900:intron | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | - | chr2_2:70443499-70443518 | Msa0268900:intron | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | + | chr2_2:70443508-70443527 | None:intergenic | 55.0% | |
| TCGATCCCCCGATTGGATCG+GGG | + | chr2_2:70443507-70443526 | None:intergenic | 60.0% | |
| TCGATCCCCCGATTGGATCG+GGG | + | chr2_2:70443507-70443526 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70442359 | 70443778 | 70442359 | ID=Msa0268900;Name=Msa0268900 |
| chr2_2 | mRNA | 70442359 | 70443778 | 70442359 | ID=Msa0268900-mRNA-1;Parent=Msa0268900;Name=Msa0268900-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|0|0|3|0|221 |
| chr2_2 | exon | 70443646 | 70443778 | 70443646 | ID=Msa0268900-mRNA-1:exon:22680;Parent=Msa0268900-mRNA-1 |
| chr2_2 | exon | 70442915 | 70443081 | 70442915 | ID=Msa0268900-mRNA-1:exon:22679;Parent=Msa0268900-mRNA-1 |
| chr2_2 | exon | 70442359 | 70442724 | 70442359 | ID=Msa0268900-mRNA-1:exon:22678;Parent=Msa0268900-mRNA-1 |
| chr2_2 | CDS | 70443646 | 70443778 | 70443646 | ID=Msa0268900-mRNA-1:cds;Parent=Msa0268900-mRNA-1 |
| chr2_2 | CDS | 70442915 | 70443081 | 70442915 | ID=Msa0268900-mRNA-1:cds;Parent=Msa0268900-mRNA-1 |
| chr2_2 | CDS | 70442359 | 70442724 | 70442359 | ID=Msa0268900-mRNA-1:cds;Parent=Msa0268900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
