AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0983030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0983030 MtrunA17_Chr1g0177591 95.281 445 21 0 1 445 130 574 0.0 877
Msa0983030 MtrunA17_Chr1g0177611 94.831 445 23 0 1 445 1 445 0.0 871
Msa0983030 MtrunA17_Chr1g0177631 93.933 445 27 0 1 445 1 445 0.0 833
Msa0983030 MtrunA17_Chr2g0331511 73.002 463 106 4 1 444 109 571 0.0 696
Msa0983030 MtrunA17_Chr2g0331471 70.130 462 119 4 1 443 176 637 0.0 659
Msa0983030 MtrunA17_Chr2g0331481 69.913 462 120 4 1 443 113 574 0.0 656
Msa0983030 MtrunA17_Chr4g0003761 67.679 461 132 4 1 444 118 578 0.0 618
Msa0983030 MtrunA17_Chr2g0331461 67.171 463 133 3 1 444 113 575 0.0 617
Msa0983030 MtrunA17_Chr2g0331521 57.328 464 179 5 1 445 110 573 0.0 530
Msa0983030 MtrunA17_Chr8g0390331 47.797 454 217 8 1 436 103 554 2.55e-143 421
Msa0983030 MtrunA17_Chr1g0147631 49.138 464 215 7 1 445 113 574 3.10e-138 409
Msa0983030 MtrunA17_Chr1g0157601 44.639 457 231 6 1 438 103 556 2.92e-137 405
Msa0983030 MtrunA17_Chr1g0157611 46.101 436 220 5 18 441 128 560 5.07e-135 400
Msa0983030 MtrunA17_Chr1g0157621 44.639 457 230 7 4 441 71 523 5.26e-132 392
Msa0983030 MtrunA17_Chr4g0059971 37.671 438 251 9 17 435 147 581 3.44e-95 298
Msa0983030 MtrunA17_Chr4g0059991 35.435 460 261 10 5 435 118 570 6.33e-94 295
Msa0983030 MtrunA17_Chr5g0415791 34.879 453 270 8 5 435 125 574 8.60e-92 290
Msa0983030 MtrunA17_Chr4g0059981 37.385 436 254 8 17 435 145 578 1.72e-91 289
Msa0983030 MtrunA17_Chr8g0362801 35.831 427 257 7 23 435 35 458 2.39e-91 285
Msa0983030 MtrunA17_Chr5g0422881 35.811 444 259 9 12 435 124 561 2.20e-89 283
Msa0983030 MtrunA17_Chr7g0255601 33.333 420 254 9 35 435 157 569 2.87e-85 273
Msa0983030 MtrunA17_Chr8g0375311 35.886 457 266 11 1 435 128 579 9.45e-85 271
Msa0983030 MtrunA17_Chr3g0104011 36.184 456 265 10 1 435 110 560 1.96e-84 270
Msa0983030 MtrunA17_Chr4g0005901 36.923 455 261 11 1 435 120 568 2.22e-82 264
Msa0983030 MtrunA17_Chr7g0255621 32.018 456 280 13 12 445 126 573 7.14e-82 264
Msa0983030 MtrunA17_Chr8g0375321 35.635 449 261 10 10 437 137 578 5.97e-81 261
Msa0983030 MtrunA17_Chr8g0375331 35.491 448 263 9 10 437 124 565 1.89e-80 259
Msa0983030 MtrunA17_Chr7g0241741 36.444 450 258 11 1 429 110 552 2.46e-80 259
Msa0983030 MtrunA17_Chr8g0375341 35.123 447 264 9 9 435 139 579 3.11e-80 259
Msa0983030 MtrunA17_Chr8g0375351 34.521 449 264 9 9 435 139 579 8.50e-80 258
Msa0983030 MtrunA17_Chr5g0415841 30.140 428 284 6 20 435 32 456 1.14e-77 249
Msa0983030 MtrunA17_Chr8g0375291 35.363 427 254 9 20 430 154 574 7.34e-77 250
Msa0983030 MtrunA17_Chr7g0255611 31.057 454 285 11 12 444 135 581 3.22e-76 249
Msa0983030 MtrunA17_Chr8g0362781 32.870 432 272 9 20 435 149 578 1.37e-75 247
Msa0983030 MtrunA17_Chr8g0375361 34.598 448 267 10 8 435 137 578 7.66e-75 245
Msa0983030 MtrunA17_Chr3g0142101 32.629 426 266 9 17 432 146 560 2.15e-72 238
Msa0983030 MtrunA17_Chr4g0060001 31.519 441 284 10 17 444 143 578 2.03e-70 234
Msa0983030 MtrunA17_Chr4g0008651 32.379 454 276 12 1 435 125 566 1.24e-69 231
Msa0983030 MtrunA17_Chr3g0077151 30.892 437 267 9 12 435 126 540 1.97e-67 224
Msa0983030 MtrunA17_Chr5g0399061 32.273 440 256 11 23 435 145 569 2.13e-66 223
Msa0983030 MtrunA17_Chr7g0214731 32.579 442 269 9 15 435 176 609 2.25e-66 224
Msa0983030 MtrunA17_Chr7g0240381 30.580 448 286 10 1 435 120 555 3.34e-66 222
Msa0983030 MtrunA17_Chr4g0014861 30.233 430 275 7 18 435 9 425 5.33e-66 218
Msa0983030 MtrunA17_Chr3g0142091 33.023 430 264 12 27 445 149 565 8.07e-66 221
Msa0983030 MtrunA17_Chr3g0112671 31.100 418 274 6 23 435 149 557 1.33e-65 220
Msa0983030 MtrunA17_Chr5g0400371 29.698 431 285 8 20 435 228 655 1.51e-65 222
Msa0983030 MtrunA17_Chr4g0014781 30.717 446 276 13 6 435 122 550 8.92e-65 218
Msa0983030 MtrunA17_Chr7g0240181 30.415 434 284 9 12 429 19 450 4.77e-64 214
Msa0983030 MtrunA17_Chr1g0147591 50.505 198 93 4 29 223 5 200 4.90e-64 205
Msa0983030 MtrunA17_Chr7g0240211 30.415 434 284 9 12 429 19 450 5.08e-64 214
Msa0983030 MtrunA17_Chr7g0240131 30.415 434 284 9 12 429 19 450 5.13e-64 214
Msa0983030 MtrunA17_Chr4g0014801 30.485 433 269 11 18 435 133 548 5.34e-64 216
Msa0983030 MtrunA17_Chr7g0235521 30.415 434 284 9 12 429 19 450 7.99e-64 213
Msa0983030 MtrunA17_Chr4g0014791 30.337 445 277 9 6 435 122 548 8.82e-64 215
Msa0983030 MtrunA17_Chr4g0063591 33.584 399 254 6 46 437 164 558 2.15e-63 214
Msa0983030 MtrunA17_Chr4g0014871 29.646 452 282 8 1 435 118 550 2.16e-63 214
Msa0983030 MtrunA17_Chr2g0325961 32.653 441 264 11 11 435 122 545 2.73e-63 213
Msa0983030 MtrunA17_Chr4g0014841 29.452 438 281 7 10 435 125 546 5.72e-63 213
Msa0983030 MtrunA17_Chr3g0082631 32.184 435 251 12 28 432 33 453 6.18e-63 211
Msa0983030 MtrunA17_Chr5g0439381 31.517 422 274 8 23 441 150 559 1.19e-62 213
Msa0983030 MtrunA17_Chr2g0284701 29.375 480 302 12 1 445 120 597 3.25e-62 212
Msa0983030 MtrunA17_Chr2g0326211 32.483 431 260 12 17 435 133 544 3.81e-62 210
Msa0983030 MtrunA17_Chr7g0240281 30.751 426 278 9 19 429 140 563 1.03e-61 210
Msa0983030 MtrunA17_Chr7g0240271 30.184 434 285 10 12 429 130 561 1.41e-61 210
Msa0983030 MtrunA17_Chr1g0213711 30.474 443 284 9 19 445 135 569 1.67e-61 209
Msa0983030 MtrunA17_Chr3g0112611 31.448 442 272 10 13 435 137 566 4.25e-61 209
Msa0983030 MtrunA17_Chr2g0325951 32.159 454 269 13 3 435 109 544 5.92e-61 207
Msa0983030 MtrunA17_Chr8g0353031 33.491 424 251 10 30 429 125 541 4.65e-60 205
Msa0983030 MtrunA17_Chr7g0214461 30.698 430 276 9 18 435 192 611 5.54e-60 206
Msa0983030 MtrunA17_Chr7g0218851 30.485 433 275 10 18 435 160 581 6.16e-60 206
Msa0983030 MtrunA17_Chr1g0193391 31.002 429 277 10 26 445 135 553 6.88e-60 206
Msa0983030 MtrunA17_Chr2g0276751 32.432 407 255 8 45 445 180 572 1.32e-59 204
Msa0983030 MtrunA17_Chr7g0271221 31.529 425 272 9 26 441 135 549 2.40e-59 204
Msa0983030 MtrunA17_Chr4g0054891 30.118 425 280 10 20 432 226 645 4.23e-59 205
Msa0983030 MtrunA17_Chr7g0240151 29.561 433 271 9 12 429 19 432 9.60e-59 199
Msa0983030 MtrunA17_Chr3g0133341 32.438 447 263 12 11 441 131 554 1.99e-57 198
Msa0983030 MtrunA17_Chr1g0187241 29.954 434 273 9 20 435 143 563 4.10e-57 198
Msa0983030 MtrunA17_Chr3g0114501 29.466 431 276 11 23 435 138 558 4.47e-57 197
Msa0983030 MtrunA17_Chr4g0056431 30.626 431 270 9 23 432 145 567 2.59e-56 196
Msa0983030 MtrunA17_Chr4g0011471 29.882 425 283 9 23 435 135 556 4.09e-56 195
Msa0983030 MtrunA17_Chr8g0379991 32.839 472 258 16 25 440 103 571 5.54e-56 194
Msa0983030 MtrunA17_Chr7g0261811 29.018 448 286 9 17 445 142 576 6.58e-56 195
Msa0983030 MtrunA17_Chr1g0166741 33.333 375 229 8 48 413 173 535 6.72e-56 194
Msa0983030 MtrunA17_Chr8g0379971 31.778 450 264 13 25 435 143 588 9.88e-56 194
Msa0983030 MtrunA17_Chr1g0166771 29.484 407 265 9 17 413 105 499 4.88e-55 191
Msa0983030 MtrunA17_Chr7g0261881 29.130 460 285 12 1 432 115 561 6.46e-55 192
Msa0983030 MtrunA17_Chr5g0399071 31.298 393 233 9 67 435 188 567 8.52e-55 192
Msa0983030 MtrunA17_Chr7g0261661 28.211 436 287 8 20 440 31 455 2.36e-53 186
Msa0983030 MtrunA17_Chr7g0261771 29.187 418 270 7 30 432 159 565 2.77e-53 188
Msa0983030 MtrunA17_Chr5g0415961 28.634 454 276 10 10 429 124 563 1.75e-52 185
Msa0983030 MtrunA17_Chr6g0451841 29.691 421 242 13 46 435 137 534 4.95e-52 183
Msa0983030 MtrunA17_Chr1g0166791 29.128 436 280 10 17 435 138 561 7.71e-52 184
Msa0983030 MtrunA17_Chr7g0261851 29.561 433 275 7 20 435 146 565 1.63e-51 183
Msa0983030 MtrunA17_Chr7g0217461 30.048 416 264 10 18 413 138 546 4.83e-51 181
Msa0983030 MtrunA17_Chr8g0362711 29.067 461 272 14 10 434 124 565 4.93e-50 178
Msa0983030 MtrunA17_Chr7g0261791 31.000 400 249 7 48 432 177 564 1.33e-49 178
Msa0983030 MtrunA17_Chr1g0166711 28.802 434 283 8 17 435 139 561 6.27e-49 176
Msa0983030 MtrunA17_Chr4g0069581 30.184 434 279 12 15 435 92 514 3.56e-48 173
Msa0983030 MtrunA17_Chr1g0166731 28.341 434 285 9 17 435 36 458 1.16e-47 170
Msa0983030 MtrunA17_Chr3g0112631 33.212 274 165 6 173 435 3 269 1.20e-46 162
Msa0983030 MtrunA17_Chr4g0011041 26.386 451 301 14 9 435 135 578 6.74e-45 164
Msa0983030 MtrunA17_Chr3g0142121 34.483 261 160 5 174 432 11 262 1.10e-43 154
Msa0983030 MtrunA17_Chr4g0060071 32.609 276 161 8 169 434 32 292 2.93e-39 143
Msa0983030 MtrunA17_Chr7g0234381 25.694 432 286 10 10 435 16 418 3.09e-32 127
Msa0983030 MtrunA17_Chr7g0234181 25.799 438 278 12 10 435 11 413 1.98e-30 121
Msa0983030 MtrunA17_Chr7g0234151 25.231 432 288 10 10 435 16 418 2.94e-28 115
Msa0983030 MtrunA17_Chr2g0326221 29.825 228 136 5 210 435 15 220 8.58e-26 104
Msa0983030 MtrunA17_Chr7g0261721 30.256 195 129 1 248 435 4 198 8.74e-26 105
Msa0983030 MtrunA17_Chr7g0261751 25.994 327 207 8 30 322 159 484 1.18e-25 109
Msa0983030 MtrunA17_Chr7g0261731 29.744 195 120 5 30 218 159 342 2.85e-20 92.0
Msa0983030 MtrunA17_Chr8g0382591 41.284 109 58 4 173 277 3 109 9.70e-18 79.7
Msa0983030 MtrunA17_Chr3g0142111 29.231 195 121 7 1 180 134 326 1.83e-17 83.2
Msa0983030 MtrunA17_Chr3g0112651 29.487 156 104 3 23 174 50 203 6.01e-14 70.9
Msa0983030 MtrunA17_Chr1g0147581 34.234 111 59 2 309 411 11 115 5.87e-12 62.4
Msa0983030 MtrunA17_Chr7g0261831 28.649 185 106 5 135 303 3 177 2.21e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0983030 AT1G52190.1 50.964 467 204 7 1 442 107 573 2.88e-169 489
Msa0983030 AT3G16180.1 51.282 468 204 10 1 445 109 575 4.57e-166 480
Msa0983030 AT1G62200.1 38.938 452 247 12 1 431 138 581 1.24e-92 291
Msa0983030 AT1G69870.1 35.586 444 266 9 19 445 165 605 2.32e-92 292
Msa0983030 AT2G02040.1 36.463 458 262 12 1 435 127 578 4.36e-88 280
Msa0983030 AT1G62200.2 37.370 479 246 13 1 431 138 610 1.59e-87 279
Msa0983030 AT1G62200.3 37.370 479 246 13 1 431 152 624 2.44e-87 279
Msa0983030 AT3G54140.1 35.965 456 266 11 1 435 110 560 2.17e-86 275
Msa0983030 AT3G54140.2 35.965 456 266 11 1 435 110 560 2.17e-86 275
Msa0983030 AT5G62680.1 35.927 437 256 8 19 435 157 589 5.85e-86 275
Msa0983030 AT1G27080.2 33.333 441 275 11 17 445 84 517 1.61e-83 266
Msa0983030 AT3G47960.1 36.754 419 240 9 37 435 192 605 2.90e-83 268
Msa0983030 AT1G18880.1 33.553 456 275 8 6 435 110 563 2.98e-83 267
Msa0983030 AT1G27080.1 33.333 441 275 11 17 445 126 559 3.08e-83 267
Msa0983030 AT1G68570.2 36.342 421 247 8 43 445 130 547 6.55e-83 266
Msa0983030 AT1G68570.1 36.342 421 247 8 43 445 160 577 1.28e-82 266
Msa0983030 AT5G01180.2 34.375 448 271 8 1 429 111 554 2.41e-81 262
Msa0983030 AT5G01180.3 34.375 448 271 8 1 429 111 554 2.41e-81 262
Msa0983030 AT5G01180.1 34.375 448 271 8 1 429 111 554 2.41e-81 262
Msa0983030 AT5G11570.1 36.807 451 198 12 1 436 99 477 8.39e-81 258
Msa0983030 AT2G02020.1 33.560 441 238 12 10 435 140 540 7.92e-72 236
Msa0983030 AT3G45650.1 33.480 454 262 11 1 435 108 540 1.19e-71 236
Msa0983030 AT5G28470.2 31.640 433 279 11 8 428 119 546 3.63e-71 235
Msa0983030 AT2G26690.3 32.941 425 274 8 20 437 92 512 2.61e-68 226
Msa0983030 AT5G28470.1 31.409 433 278 12 8 428 119 544 3.01e-68 227
Msa0983030 AT2G26690.2 32.941 425 274 8 20 437 104 524 3.04e-68 227
Msa0983030 AT2G26690.1 32.941 425 274 8 20 437 137 557 8.92e-68 226
Msa0983030 AT3G45710.1 31.435 439 272 10 9 435 120 541 1.86e-66 223
Msa0983030 AT3G45650.2 31.667 480 262 12 1 435 108 566 7.77e-66 221
Msa0983030 AT3G54450.1 30.879 421 263 7 30 429 120 533 2.81e-65 219
Msa0983030 AT3G45660.1 31.628 430 261 10 17 435 132 539 1.40e-64 218
Msa0983030 AT3G45660.3 31.628 430 261 10 17 435 132 539 1.40e-64 218
Msa0983030 AT3G45720.1 31.690 426 266 10 17 435 130 537 1.83e-64 217
Msa0983030 AT3G45660.2 31.628 430 261 10 17 435 153 560 2.48e-64 217
Msa0983030 AT1G32450.1 29.139 453 294 10 9 437 134 583 2.96e-63 215
Msa0983030 AT5G13400.1 30.839 441 291 5 17 445 180 618 5.73e-63 214
Msa0983030 AT3G45700.1 31.850 427 259 10 17 435 127 529 2.07e-62 211
Msa0983030 AT1G33440.1 31.279 438 271 9 10 429 136 561 2.31e-62 213
Msa0983030 AT1G59740.1 33.894 416 252 11 30 432 166 571 1.35e-61 210
Msa0983030 AT3G45680.1 33.019 424 260 10 19 435 133 539 8.10e-61 207
Msa0983030 AT1G72125.1 30.837 454 280 10 1 435 115 553 1.97e-60 206
Msa0983030 AT3G53960.1 29.581 453 293 12 1 435 126 570 3.67e-60 207
Msa0983030 AT2G37900.2 29.054 444 293 12 1 432 48 481 7.89e-60 203
Msa0983030 AT3G21670.1 30.414 411 274 6 23 430 149 550 8.68e-60 205
Msa0983030 AT1G22550.1 29.167 432 272 8 19 435 144 556 2.93e-59 203
Msa0983030 AT2G37900.1 29.054 444 293 12 1 432 127 560 3.42e-59 203
Msa0983030 AT5G46050.2 30.769 416 260 9 14 413 24 427 2.15e-58 199
Msa0983030 AT4G21680.1 29.787 423 270 10 33 435 155 570 3.76e-58 201
Msa0983030 AT1G27040.3 31.542 428 256 10 25 434 115 523 1.37e-57 198
Msa0983030 AT5G46050.1 30.529 416 261 8 14 413 136 539 3.13e-57 198
Msa0983030 AT1G27040.2 31.395 430 258 10 23 434 141 551 3.42e-57 198
Msa0983030 AT1G27040.1 31.542 428 256 10 25 434 147 555 3.54e-57 198
Msa0983030 AT1G22570.2 30.569 422 255 10 14 416 99 501 6.91e-57 196
Msa0983030 AT1G22570.1 29.762 420 261 8 14 416 136 538 1.28e-56 196
Msa0983030 AT5G14940.1 31.293 441 268 12 15 430 103 533 3.50e-55 192
Msa0983030 AT1G72140.1 29.095 464 268 11 1 435 120 551 3.51e-55 192
Msa0983030 AT1G12110.1 31.971 416 254 9 39 435 161 566 4.18e-55 193
Msa0983030 AT1G72130.2 31.308 428 252 11 17 429 6 406 6.07e-55 188
Msa0983030 AT1G72130.3 31.308 428 252 11 17 429 6 406 6.07e-55 188
Msa0983030 AT2G02020.2 30.682 440 231 14 10 435 140 519 2.32e-54 189
Msa0983030 AT1G72130.1 29.911 448 273 12 1 435 111 530 3.41e-54 189
Msa0983030 AT1G22540.1 30.044 456 276 11 1 435 116 549 3.94e-54 189
Msa0983030 AT1G69860.1 31.944 432 270 11 15 435 128 546 6.37e-54 189
Msa0983030 AT5G46040.1 30.637 408 253 8 23 413 145 539 1.31e-52 186
Msa0983030 AT5G19640.1 29.530 447 278 14 9 437 156 583 4.88e-52 185
Msa0983030 AT2G40460.1 29.056 413 264 7 28 425 144 542 3.07e-51 182
Msa0983030 AT1G72120.1 28.982 452 287 9 1 435 115 549 5.86e-50 178
Msa0983030 AT3G01350.1 28.798 441 271 13 27 433 116 547 6.71e-47 170
Msa0983030 AT1G69850.1 28.758 459 291 13 7 434 120 573 4.12e-46 168
Msa0983030 AT5G62730.2 28.508 449 271 12 16 434 92 520 6.76e-46 167
Msa0983030 AT5G62730.1 28.508 449 271 12 16 434 151 579 1.35e-45 167
Msa0983030 AT3G45690.1 29.343 426 236 14 17 435 129 496 4.26e-43 159
Msa0983030 AT3G25260.1 25.701 428 274 11 14 434 122 512 1.91e-42 157
Msa0983030 AT3G25280.1 25.234 428 282 10 14 434 122 518 5.16e-35 136
Msa0983030 AT2G38100.2 27.095 358 226 17 95 435 145 484 9.91e-21 95.1
Msa0983030 AT2G38100.1 27.095 358 226 17 95 435 161 500 1.25e-20 94.7
Msa0983030 AT2G38100.3 27.095 358 226 17 95 435 167 506 1.33e-20 94.7

Find 126 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGTTGCTGCTTCGCTTTC+TGG 0.093260 6_4:-24542134 Msa0983030:CDS
CTGTATAATAAAACTCATTT+TGG 0.135749 6_4:+24542177 None:intergenic
TCTTAGTTTACCTTGTAAAT+AGG 0.181412 6_4:-24543712 None:intergenic
GAACAAAGCTTGTGTTATTA+AGG 0.192435 6_4:-24542699 Msa0983030:CDS
TCCAAGACCCTATTGTTATT+AGG 0.209799 6_4:+24543127 None:intergenic
TTATTCTTATTCGTTGTTAC+AGG 0.215204 6_4:-24543323 Msa0983030:five_prime_UTR
CTAAATAATAGAGTATATTA+AGG 0.236749 6_4:+24541958 None:intergenic
CCAAGACCCTATTGTTATTA+GGG 0.240592 6_4:+24543128 None:intergenic
AAGAGTTAAGTAAGGATTAA+TGG 0.259384 6_4:-24541905 Msa0983030:exon
TTCTTTGCACTGATCGTAAC+TGG 0.278436 6_4:+24542368 None:intergenic
CTTAGTTTACCTTGTAAATA+GGG 0.281930 6_4:-24543711 None:intergenic
GTATATATCCAAGATCATTT+TGG 0.295506 6_4:-24543040 Msa0983030:CDS
TTAGTTTGCAGTTGGGCTTA+TGG 0.299490 6_4:-24541939 Msa0983030:CDS
TTTGGTTGGAAAATTGGTTT+TGG 0.301389 6_4:-24543022 Msa0983030:CDS
AAATGCGAACGATGGAGTTT+TGG 0.301463 6_4:-24542270 Msa0983030:CDS
GCTGCTTCGCTTTCTGGATT+GGG 0.319848 6_4:-24542128 Msa0983030:CDS
TTGTGAGAGTTATTCCATTA+TGG 0.321111 6_4:-24542589 Msa0983030:CDS
TGCTGCTTCGCTTTCTGGAT+TGG 0.335882 6_4:-24542129 Msa0983030:CDS
AAGATAACCCTAATAACAAT+AGG 0.342050 6_4:-24543135 Msa0983030:CDS
ATATAGGTACGGTAATTATA+TGG 0.342184 6_4:-24542445 Msa0983030:CDS
ATCTACTGTGCATAGATTCC+AGG 0.353747 6_4:+24542634 None:intergenic
TGTAACAACGAATAAGAATA+AGG 0.355212 6_4:+24543325 None:intergenic
AAATACTCTTGGCTTATAAC+TGG 0.364606 6_4:-24541990 Msa0983030:CDS
TTTAGTCTCATGTCAATTGC+AGG 0.365344 6_4:-24543208 Msa0983030:CDS
CCTTTAGCATCGAAGATAAG+AGG 0.383147 6_4:-24542395 Msa0983030:CDS
GTTTCATGTTCCATGGCATT+TGG 0.404377 6_4:-24543178 Msa0983030:CDS
GGATAAGCATCACACAATTT+CGG 0.405376 6_4:+24543558 None:intergenic
GCAAAGAAAAGAATGGGAAT+TGG 0.406768 6_4:-24542353 Msa0983030:CDS
ACCTTGTAAATAGGGATTGA+GGG 0.408536 6_4:-24543703 Msa0983030:five_prime_UTR
CCTCTTATCTTCGATGCTAA+AGG 0.412800 6_4:+24542395 None:intergenic
CCCTAATAACAATAGGGTCT+TGG 0.418911 6_4:-24543128 Msa0983030:CDS
TCACAAATGAGTAGGCTTGA+TGG 0.421746 6_4:-24541759 Msa0983030:three_prime_UTR
CTATTATTTAGTTTGCAGTT+GGG 0.422804 6_4:-24541946 Msa0983030:CDS
TCTTTGAGCGTTATCAATAT+AGG 0.428181 6_4:-24542461 Msa0983030:CDS
TCTGGATTGGGAATGGCTGC+AGG 0.429137 6_4:-24542116 Msa0983030:CDS
TCTGAAGCAGTCAATTTCAT+AGG 0.436089 6_4:-24542200 Msa0983030:CDS
GCACCTCAACTTTGTCTAGC+TGG 0.440258 6_4:-24542227 Msa0983030:CDS
TCTATTATTTAGTTTGCAGT+TGG 0.444992 6_4:-24541947 Msa0983030:CDS
ATGATCCCACTAGACCATAA+TGG 0.450318 6_4:+24542575 None:intergenic
TTCGCTTTCTGGATTGGGAA+TGG 0.452382 6_4:-24542123 Msa0983030:CDS
TTATTCGTTGTTACAGGGAA+TGG 0.452723 6_4:-24543317 Msa0983030:exon
TACCTTGTAAATAGGGATTG+AGG 0.458204 6_4:-24543704 Msa0983030:five_prime_UTR
ATCACCAACATCATGGGAAA+TGG 0.460646 6_4:-24543248 Msa0983030:CDS
GGAGGTGATATGTCTGTTCA+AGG 0.462389 6_4:+24542505 None:intergenic
TGCAGTTGAAGAGTTAAGTA+AGG 0.466329 6_4:-24541913 Msa0983030:CDS
ATCAGTGCAAAGAAAAGAAT+GGG 0.469148 6_4:-24542359 Msa0983030:CDS
AGATAACCCTAATAACAATA+GGG 0.471415 6_4:-24543134 Msa0983030:CDS
CGCTGGAACTTCAAAGTTGG+AGG 0.472600 6_4:+24542487 None:intergenic
TTCATCATGAGGTTCAGCTC+AGG 0.475030 6_4:+24543373 None:intergenic
GATCAGTGCAAAGAAAAGAA+TGG 0.478546 6_4:-24542360 Msa0983030:CDS
TAAATAATAGAGTATATTAA+GGG 0.480488 6_4:+24541959 None:intergenic
AATGAAAAGTCGCAACTTCA+AGG 0.483351 6_4:-24541530 Msa0983030:three_prime_UTR
CATGATGAAATAAGAAAAGT+TGG 0.484279 6_4:-24543359 Msa0983030:five_prime_UTR
ACCTACCTTAGTTTATCAGT+TGG 0.486210 6_4:+24542797 None:intergenic
AACCACACTGTAACTGCATC+AGG 0.486726 6_4:+24543537 None:intergenic
AGTAAGGATTAATGGCTTTG+TGG 0.486916 6_4:-24541897 Msa0983030:exon
ACTTCAAGAGGAGGAAAAGA+TGG 0.489744 6_4:-24542050 Msa0983030:CDS
CGCAACTGCGGTGTGAACTT+CGG 0.494852 6_4:+24543479 None:intergenic
GCGATCAATCACCAACATCA+TGG 0.496498 6_4:-24543255 Msa0983030:CDS
CTCATGTCAATTGCAGGTGC+TGG 0.499541 6_4:-24543202 Msa0983030:CDS
TGCTGGTGTTTCATGTTCCA+TGG 0.501696 6_4:-24543185 Msa0983030:CDS
TATCTTTATATATTATAACT+TGG 0.502695 6_4:+24541704 None:intergenic
GGGAATGGCTGCAGGAAGCT+TGG 0.503502 6_4:-24542108 Msa0983030:CDS
CCCCTCAATCCCTATTTACA+AGG 0.506971 6_4:+24543702 None:intergenic
TCAGACAAAGAAAATTCAGA+TGG 0.509895 6_4:-24541731 Msa0983030:three_prime_UTR
ATGATGACCCTTAGCATTGG+AGG 0.512129 6_4:-24542554 Msa0983030:CDS
TCCCGCTGGAACTTCAAAGT+TGG 0.516812 6_4:+24542484 None:intergenic
TTACTTAACTCTTCAACTGC+AGG 0.526205 6_4:+24541915 None:intergenic
TCATCATGAGGTTCAGCTCA+GGG 0.527594 6_4:+24543374 None:intergenic
GCAACACTAGACATAGTACT+TGG 0.530889 6_4:+24542149 None:intergenic
TGGGAAGATTTGAACGAACA+TGG 0.532879 6_4:-24543581 Msa0983030:five_prime_UTR
GTTATTCCATTATGGTCTAG+TGG 0.537272 6_4:-24542581 Msa0983030:CDS
TATTCTTATTCGTTGTTACA+GGG 0.537856 6_4:-24543322 Msa0983030:five_prime_UTR
CGCAAAACTAGCGAACAAGT+TGG 0.540410 6_4:+24542919 None:intergenic
CGATCAATCACCAACATCAT+GGG 0.540764 6_4:-24543254 Msa0983030:CDS
CGAAGTTCACACCGCAGTTG+CGG 0.542588 6_4:-24543478 Msa0983030:five_prime_UTR
AAAATGAGCCTCCAATGCTA+AGG 0.543292 6_4:+24542546 None:intergenic
ATGGTTCAAGAATAAACCCC+TGG 0.543754 6_4:-24542652 Msa0983030:CDS
CAATATTTCAACCGCAATTG+CGG 0.549207 6_4:-24543424 Msa0983030:five_prime_UTR
TGCAATTGACATGAGACTAA+AGG 0.550395 6_4:+24543210 None:intergenic
TGGTTCCAACTGATAAACTA+AGG 0.551260 6_4:-24542802 Msa0983030:intron
CTTTAGCATCGAAGATAAGA+GGG 0.558229 6_4:-24542394 Msa0983030:CDS
ATCATGATGACCCTTAGCAT+TGG 0.562857 6_4:-24542557 Msa0983030:CDS
TTATTCCATTATGGTCTAGT+GGG 0.564458 6_4:-24542580 Msa0983030:CDS
TCTACTGTGCATAGATTCCA+GGG 0.566589 6_4:+24542635 None:intergenic
GGTGATTGATCGCCTTCCGT+TGG 0.568053 6_4:+24543265 None:intergenic
GGGCATATGATTTCAAATTG+TGG 0.568523 6_4:+24543394 None:intergenic
TTGTTGTGATGGTAAAATTG+AGG 0.569745 6_4:+24542839 None:intergenic
CCTTGTAAATAGGGATTGAG+GGG 0.571276 6_4:-24543702 Msa0983030:five_prime_UTR
GAACAAGATATAGCATGTGA+TGG 0.572383 6_4:-24542671 Msa0983030:CDS
ATTTAAGATACTCGAACGCA+TGG 0.573198 6_4:+24541627 None:intergenic
GAGCGTTATCAATATAGGTA+CGG 0.578923 6_4:-24542456 Msa0983030:CDS
TCCAACTTTGAAGTTCCAGC+GGG 0.578991 6_4:-24542485 Msa0983030:CDS
GATTTCTGATGATATTAACA+AGG 0.586027 6_4:-24542024 Msa0983030:CDS
TTGGTCTGCACCAAATGCCA+TGG 0.588107 6_4:+24543168 None:intergenic
ATTGCCATTTCCCATGATGT+TGG 0.593954 6_4:+24543244 None:intergenic
GATTTGAGTCCTTGTTGTGA+TGG 0.596972 6_4:+24542828 None:intergenic
TACAGGGAATGGCATTGTTG+TGG 0.598433 6_4:-24543306 Msa0983030:exon
CAGACAAAGAAAATTCAGAT+GGG 0.600439 6_4:-24541730 Msa0983030:three_prime_UTR
GTAGAAAACACTACTTCAAG+AGG 0.601842 6_4:-24542062 Msa0983030:CDS
CTTCAAGAGGAGGAAAAGAT+GGG 0.604855 6_4:-24542049 Msa0983030:CDS
ATAACGCTCAAAGATCCCGC+TGG 0.608804 6_4:+24542470 None:intergenic
AGGAGAAGAAATGCGAACGA+TGG 0.609047 6_4:-24542278 Msa0983030:CDS
CTCCAACTTTGAAGTTCCAG+CGG 0.612248 6_4:-24542486 Msa0983030:CDS
AAATGAGCCTCCAATGCTAA+GGG 0.618035 6_4:+24542547 None:intergenic
ACTAGATTCTTATTACAACA+TGG 0.636227 6_4:+24541677 None:intergenic
GAAAACACTACTTCAAGAGG+AGG 0.636406 6_4:-24542059 Msa0983030:CDS
AACAGCAATGATCAAACCAA+CGG 0.645820 6_4:-24543281 Msa0983030:CDS
TGATGCGCTAGCCTCTATGA+TGG 0.647977 6_4:+24543448 None:intergenic
GCAATGATCAAACCAACGGA+AGG 0.652956 6_4:-24543277 Msa0983030:CDS
ATTTCTGATGATATTAACAA+GGG 0.659432 6_4:-24542023 Msa0983030:CDS
ATGGCATCACACCGCAACTG+CGG 0.667556 6_4:+24543467 None:intergenic
CAACAAGGACTCAAATCTCG+TGG 0.669262 6_4:-24542822 Msa0983030:CDS
TAATGGAATAACTCTCACAA+TGG 0.677324 6_4:+24542592 None:intergenic
CAAGAGGAGGAAAAGATGGG+TGG 0.679323 6_4:-24542046 Msa0983030:CDS
CTTGTAAATAGGGATTGAGG+GGG 0.683649 6_4:-24543701 Msa0983030:five_prime_UTR
GCGGTGTGATGCCATCATAG+AGG 0.687562 6_4:-24543459 Msa0983030:five_prime_UTR
ATCCTGATGCAGTTACAGTG+TGG 0.689011 6_4:-24543539 Msa0983030:five_prime_UTR
ATACCAGCTAGACAAAGTTG+AGG 0.689573 6_4:+24542224 None:intergenic
GTGGTTATACACGTACGTAG+AGG 0.689588 6_4:-24543520 Msa0983030:five_prime_UTR
CTACTGTGCATAGATTCCAG+GGG 0.694955 6_4:+24542636 None:intergenic
GTGGTCTGTATCCGCAATTG+CGG 0.703044 6_4:+24543413 None:intergenic
AGCAAGAAAGAATAACAGTG+TGG 0.706784 6_4:+24542973 None:intergenic
GAAAAGTCGCAACTTCAAGG+AGG 0.727652 6_4:-24541527 Msa0983030:three_prime_UTR
AGAGGCTAGCAGTTACAATG+TGG 0.732749 6_4:-24543502 Msa0983030:five_prime_UTR
ATGCTAAAGGAATAAGAACG+CGG 0.758334 6_4:+24542408 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTTAGTTTTTATTTTT+GGG - chr6_4:24541623-24541642 Msa0983030:three_prime_UTR 10.0%
!! TAAATAATAGAGTATATTAA+GGG + chr6_4:24543267-24543286 None:intergenic 10.0%
!! TATCTTTATATATTATAACT+TGG + chr6_4:24543522-24543541 None:intergenic 10.0%
!!! AAGTTTTAGTTTTTATTTTT+GGG - chr6_4:24541623-24541642 Msa0983030:three_prime_UTR 10.0%
!! TAAATAATAGAGTATATTAA+GGG + chr6_4:24543267-24543286 None:intergenic 10.0%
!! TATCTTTATATATTATAACT+TGG + chr6_4:24543522-24543541 None:intergenic 10.0%
!!! GAAGTTTTAGTTTTTATTTT+TGG - chr6_4:24541622-24541641 Msa0983030:three_prime_UTR 15.0%
!!! ATAAATTTTGGTGAAATATT+CGG - chr6_4:24542475-24542494 Msa0983030:CDS 15.0%
!! CTAAATAATAGAGTATATTA+AGG + chr6_4:24543268-24543287 None:intergenic 15.0%
!!! GAAGTTTTAGTTTTTATTTT+TGG - chr6_4:24541622-24541641 Msa0983030:three_prime_UTR 15.0%
!!! ATAAATTTTGGTGAAATATT+CGG - chr6_4:24542475-24542494 Msa0983030:CDS 15.0%
!! CTAAATAATAGAGTATATTA+AGG + chr6_4:24543268-24543287 None:intergenic 15.0%
!!! ACAAACATAAGTTTTTTCAT+TGG - chr6_4:24541571-24541590 Msa0983030:three_prime_UTR 20.0%
!!! GGTTATCTTTTATATTTACT+TGG + chr6_4:24542077-24542096 None:intergenic 20.0%
!!! TTTTGAATCTTTACATAAAG+AGG + chr6_4:24542279-24542298 None:intergenic 20.0%
!!! TAAAATTGAGGTGAATTTTT+AGG + chr6_4:24542375-24542394 None:intergenic 20.0%
!!! TTTGCATATTCCATAAATTT+TGG - chr6_4:24542463-24542482 Msa0983030:CDS 20.0%
!! GAATATTTCACCAAAATTTA+TGG + chr6_4:24542476-24542495 None:intergenic 20.0%
!!! CTGTATAATAAAACTCATTT+TGG + chr6_4:24543049-24543068 None:intergenic 20.0%
!! ATTTCTGATGATATTAACAA+GGG - chr6_4:24543200-24543219 Msa0983030:CDS 20.0%
!!! ACAAACATAAGTTTTTTCAT+TGG - chr6_4:24541571-24541590 Msa0983030:three_prime_UTR 20.0%
!!! GGTTATCTTTTATATTTACT+TGG + chr6_4:24542077-24542096 None:intergenic 20.0%
!!! TTTTGAATCTTTACATAAAG+AGG + chr6_4:24542279-24542298 None:intergenic 20.0%
!!! TAAAATTGAGGTGAATTTTT+AGG + chr6_4:24542375-24542394 None:intergenic 20.0%
!!! TTTGCATATTCCATAAATTT+TGG - chr6_4:24542463-24542482 Msa0983030:CDS 20.0%
!! GAATATTTCACCAAAATTTA+TGG + chr6_4:24542476-24542495 None:intergenic 20.0%
!!! CTGTATAATAAAACTCATTT+TGG + chr6_4:24543049-24543068 None:intergenic 20.0%
!! ATTTCTGATGATATTAACAA+GGG - chr6_4:24543200-24543219 Msa0983030:CDS 20.0%
!!! ACTTTTCTTATTTCATCATG+AGG + chr6_4:24541864-24541883 None:intergenic 25.0%
! CATGATGAAATAAGAAAAGT+TGG - chr6_4:24541864-24541883 Msa0983030:three_prime_UTR 25.0%
! TGTAACAACGAATAAGAATA+AGG + chr6_4:24541901-24541920 None:intergenic 25.0%
! TTATTCTTATTCGTTGTTAC+AGG - chr6_4:24541900-24541919 Msa0983030:exon 25.0%
! TATTCTTATTCGTTGTTACA+GGG - chr6_4:24541901-24541920 Msa0983030:exon 25.0%
! AAGATAACCCTAATAACAAT+AGG - chr6_4:24542088-24542107 Msa0983030:CDS 25.0%
! AGATAACCCTAATAACAATA+GGG - chr6_4:24542089-24542108 Msa0983030:CDS 25.0%
!! GTATATATCCAAGATCATTT+TGG - chr6_4:24542183-24542202 Msa0983030:CDS 25.0%
! ATATAGGTACGGTAATTATA+TGG - chr6_4:24542778-24542797 Msa0983030:intron 25.0%
!! GTTTTTATCTTTTCTCTACT+CGG - chr6_4:24542896-24542915 Msa0983030:CDS 25.0%
! GATTTCTGATGATATTAACA+AGG - chr6_4:24543199-24543218 Msa0983030:CDS 25.0%
!!! TCTATTATTTAGTTTGCAGT+TGG - chr6_4:24543276-24543295 Msa0983030:CDS 25.0%
!!! CTATTATTTAGTTTGCAGTT+GGG - chr6_4:24543277-24543296 Msa0983030:CDS 25.0%
! AAGAGTTAAGTAAGGATTAA+TGG - chr6_4:24543318-24543337 Msa0983030:exon 25.0%
! ATTAAGTCTCAAAAATTGTG+TGG - chr6_4:24543359-24543378 Msa0983030:five_prime_UTR 25.0%
! ATTTGTGACAAAAACGAATA+TGG + chr6_4:24543452-24543471 None:intergenic 25.0%
! ACTAGATTCTTATTACAACA+TGG + chr6_4:24543549-24543568 None:intergenic 25.0%
!!! ACTTTTCTTATTTCATCATG+AGG + chr6_4:24541864-24541883 None:intergenic 25.0%
! CATGATGAAATAAGAAAAGT+TGG - chr6_4:24541864-24541883 Msa0983030:three_prime_UTR 25.0%
! TGTAACAACGAATAAGAATA+AGG + chr6_4:24541901-24541920 None:intergenic 25.0%
! TTATTCTTATTCGTTGTTAC+AGG - chr6_4:24541900-24541919 Msa0983030:exon 25.0%
! TATTCTTATTCGTTGTTACA+GGG - chr6_4:24541901-24541920 Msa0983030:exon 25.0%
! AAGATAACCCTAATAACAAT+AGG - chr6_4:24542088-24542107 Msa0983030:CDS 25.0%
! AGATAACCCTAATAACAATA+GGG - chr6_4:24542089-24542108 Msa0983030:CDS 25.0%
!! GTATATATCCAAGATCATTT+TGG - chr6_4:24542183-24542202 Msa0983030:CDS 25.0%
! ATATAGGTACGGTAATTATA+TGG - chr6_4:24542778-24542797 Msa0983030:intron 25.0%
!! GTTTTTATCTTTTCTCTACT+CGG - chr6_4:24542896-24542915 Msa0983030:CDS 25.0%
! GATTTCTGATGATATTAACA+AGG - chr6_4:24543199-24543218 Msa0983030:CDS 25.0%
!!! TCTATTATTTAGTTTGCAGT+TGG - chr6_4:24543276-24543295 Msa0983030:CDS 25.0%
!!! CTATTATTTAGTTTGCAGTT+GGG - chr6_4:24543277-24543296 Msa0983030:CDS 25.0%
! AAGAGTTAAGTAAGGATTAA+TGG - chr6_4:24543318-24543337 Msa0983030:exon 25.0%
! ATTAAGTCTCAAAAATTGTG+TGG - chr6_4:24543359-24543378 Msa0983030:five_prime_UTR 25.0%
! ATTTGTGACAAAAACGAATA+TGG + chr6_4:24543452-24543471 None:intergenic 25.0%
! ACTAGATTCTTATTACAACA+TGG + chr6_4:24543549-24543568 None:intergenic 25.0%
!! TCTTGGAAATGTTTTTCAAC+TGG - chr6_4:24542112-24542131 Msa0983030:CDS 30.0%
!! ATATCCAAGATCATTTTGGT+TGG - chr6_4:24542187-24542206 Msa0983030:CDS 30.0%
! TTTTCCAACCAAAATGATCT+TGG + chr6_4:24542194-24542213 None:intergenic 30.0%
!!! GATCATTTTGGTTGGAAAAT+TGG - chr6_4:24542195-24542214 Msa0983030:CDS 30.0%
!! TTTGGTTGGAAAATTGGTTT+TGG - chr6_4:24542201-24542220 Msa0983030:CDS 30.0%
! TGGAAGTTTTCTGTTGTTAT+AGG + chr6_4:24542346-24542365 None:intergenic 30.0%
!! AATTGAGGTGAATTTTTAGG+CGG + chr6_4:24542372-24542391 None:intergenic 30.0%
TTGTTGTGATGGTAAAATTG+AGG + chr6_4:24542387-24542406 None:intergenic 30.0%
! TCAATTTTACCATCACAACA+AGG - chr6_4:24542386-24542405 Msa0983030:CDS 30.0%
! GGAACTAACTTTTATATCTC+AGG - chr6_4:24542496-24542515 Msa0983030:CDS 30.0%
! GAACAAAGCTTGTGTTATTA+AGG - chr6_4:24542524-24542543 Msa0983030:CDS 30.0%
TAATGGAATAACTCTCACAA+TGG + chr6_4:24542634-24542653 None:intergenic 30.0%
TTGTGAGAGTTATTCCATTA+TGG - chr6_4:24542634-24542653 Msa0983030:CDS 30.0%
TTATTCCATTATGGTCTAGT+GGG - chr6_4:24542643-24542662 Msa0983030:CDS 30.0%
TCTTTGAGCGTTATCAATAT+AGG - chr6_4:24542762-24542781 Msa0983030:intron 30.0%
ATCAGTGCAAAGAAAAGAAT+GGG - chr6_4:24542864-24542883 Msa0983030:CDS 30.0%
!! GTCATTTTGACAAATACTCT+TGG - chr6_4:24543222-24543241 Msa0983030:CDS 30.0%
AAATACTCTTGGCTTATAAC+TGG - chr6_4:24543233-24543252 Msa0983030:CDS 30.0%
TCAGACAAAGAAAATTCAGA+TGG - chr6_4:24543492-24543511 Msa0983030:five_prime_UTR 30.0%
CAGACAAAGAAAATTCAGAT+GGG - chr6_4:24543493-24543512 Msa0983030:five_prime_UTR 30.0%
!! TCTTGGAAATGTTTTTCAAC+TGG - chr6_4:24542112-24542131 Msa0983030:CDS 30.0%
!! ATATCCAAGATCATTTTGGT+TGG - chr6_4:24542187-24542206 Msa0983030:CDS 30.0%
! TTTTCCAACCAAAATGATCT+TGG + chr6_4:24542194-24542213 None:intergenic 30.0%
!!! GATCATTTTGGTTGGAAAAT+TGG - chr6_4:24542195-24542214 Msa0983030:CDS 30.0%
!! TTTGGTTGGAAAATTGGTTT+TGG - chr6_4:24542201-24542220 Msa0983030:CDS 30.0%
! TGGAAGTTTTCTGTTGTTAT+AGG + chr6_4:24542346-24542365 None:intergenic 30.0%
!! AATTGAGGTGAATTTTTAGG+CGG + chr6_4:24542372-24542391 None:intergenic 30.0%
TTGTTGTGATGGTAAAATTG+AGG + chr6_4:24542387-24542406 None:intergenic 30.0%
! TCAATTTTACCATCACAACA+AGG - chr6_4:24542386-24542405 Msa0983030:CDS 30.0%
! GGAACTAACTTTTATATCTC+AGG - chr6_4:24542496-24542515 Msa0983030:CDS 30.0%
! GAACAAAGCTTGTGTTATTA+AGG - chr6_4:24542524-24542543 Msa0983030:CDS 30.0%
TAATGGAATAACTCTCACAA+TGG + chr6_4:24542634-24542653 None:intergenic 30.0%
TTGTGAGAGTTATTCCATTA+TGG - chr6_4:24542634-24542653 Msa0983030:CDS 30.0%
TTATTCCATTATGGTCTAGT+GGG - chr6_4:24542643-24542662 Msa0983030:CDS 30.0%
TCTTTGAGCGTTATCAATAT+AGG - chr6_4:24542762-24542781 Msa0983030:intron 30.0%
ATCAGTGCAAAGAAAAGAAT+GGG - chr6_4:24542864-24542883 Msa0983030:CDS 30.0%
!! GTCATTTTGACAAATACTCT+TGG - chr6_4:24543222-24543241 Msa0983030:CDS 30.0%
AAATACTCTTGGCTTATAAC+TGG - chr6_4:24543233-24543252 Msa0983030:CDS 30.0%
TCAGACAAAGAAAATTCAGA+TGG - chr6_4:24543492-24543511 Msa0983030:five_prime_UTR 30.0%
CAGACAAAGAAAATTCAGAT+GGG - chr6_4:24543493-24543512 Msa0983030:five_prime_UTR 30.0%
TACCTTGTAAATAGGGATTG+AGG - chr6_4:24541519-24541538 Msa0983030:three_prime_UTR 35.0%
ACCTTGTAAATAGGGATTGA+GGG - chr6_4:24541520-24541539 Msa0983030:three_prime_UTR 35.0%
GGATAAGCATCACACAATTT+CGG + chr6_4:24541668-24541687 None:intergenic 35.0%
CAATATTTCAACCGCAATTG+CGG - chr6_4:24541799-24541818 Msa0983030:three_prime_UTR 35.0%
GGGCATATGATTTCAAATTG+TGG + chr6_4:24541832-24541851 None:intergenic 35.0%
TTATTCGTTGTTACAGGGAA+TGG - chr6_4:24541906-24541925 Msa0983030:exon 35.0%
AACAGCAATGATCAAACCAA+CGG - chr6_4:24541942-24541961 Msa0983030:CDS 35.0%
TGCAATTGACATGAGACTAA+AGG + chr6_4:24542016-24542035 None:intergenic 35.0%
TTTAGTCTCATGTCAATTGC+AGG - chr6_4:24542015-24542034 Msa0983030:CDS 35.0%
! CCAAGACCCTATTGTTATTA+GGG + chr6_4:24542098-24542117 None:intergenic 35.0%
! TCCAAGACCCTATTGTTATT+AGG + chr6_4:24542099-24542118 None:intergenic 35.0%
! GATAAAAACATGAGTGCTGT+TGG + chr6_4:24542231-24542250 None:intergenic 35.0%
AGCAAGAAAGAATAACAGTG+TGG + chr6_4:24542253-24542272 None:intergenic 35.0%
TGGTTCCAACTGATAAACTA+AGG - chr6_4:24542421-24542440 Msa0983030:CDS 35.0%
TCCAACTGATAAACTAAGGT+AGG - chr6_4:24542425-24542444 Msa0983030:CDS 35.0%
ACCTACCTTAGTTTATCAGT+TGG + chr6_4:24542429-24542448 None:intergenic 35.0%
GAACAAGATATAGCATGTGA+TGG - chr6_4:24542552-24542571 Msa0983030:CDS 35.0%
GTTATTCCATTATGGTCTAG+TGG - chr6_4:24542642-24542661 Msa0983030:CDS 35.0%
GAGCGTTATCAATATAGGTA+CGG - chr6_4:24542767-24542786 Msa0983030:intron 35.0%
ATGCTAAAGGAATAAGAACG+CGG + chr6_4:24542818-24542837 None:intergenic 35.0%
! CTTTAGCATCGAAGATAAGA+GGG - chr6_4:24542829-24542848 Msa0983030:CDS 35.0%
GATCAGTGCAAAGAAAAGAA+TGG - chr6_4:24542863-24542882 Msa0983030:CDS 35.0%
GCAAAGAAAAGAATGGGAAT+TGG - chr6_4:24542870-24542889 Msa0983030:CDS 35.0%
!!! CAGCGATTTTTGAGACTATA+AGG - chr6_4:24542925-24542944 Msa0983030:CDS 35.0%
! TCTGAAGCAGTCAATTTCAT+AGG - chr6_4:24543023-24543042 Msa0983030:CDS 35.0%
GTAGAAAACACTACTTCAAG+AGG - chr6_4:24543161-24543180 Msa0983030:CDS 35.0%
TTACTTAACTCTTCAACTGC+AGG + chr6_4:24543311-24543330 None:intergenic 35.0%
TGCAGTTGAAGAGTTAAGTA+AGG - chr6_4:24543310-24543329 Msa0983030:exon 35.0%
! AGTAAGGATTAATGGCTTTG+TGG - chr6_4:24543326-24543345 Msa0983030:five_prime_UTR 35.0%
! CGTTTTTGTCACAAATGAGT+AGG - chr6_4:24543456-24543475 Msa0983030:five_prime_UTR 35.0%
! ATTTAAGATACTCGAACGCA+TGG + chr6_4:24543599-24543618 None:intergenic 35.0%
AATGAAAAGTCGCAACTTCA+AGG - chr6_4:24543693-24543712 Msa0983030:five_prime_UTR 35.0%
TACCTTGTAAATAGGGATTG+AGG - chr6_4:24541519-24541538 Msa0983030:three_prime_UTR 35.0%
ACCTTGTAAATAGGGATTGA+GGG - chr6_4:24541520-24541539 Msa0983030:three_prime_UTR 35.0%
GGATAAGCATCACACAATTT+CGG + chr6_4:24541668-24541687 None:intergenic 35.0%
CAATATTTCAACCGCAATTG+CGG - chr6_4:24541799-24541818 Msa0983030:three_prime_UTR 35.0%
GGGCATATGATTTCAAATTG+TGG + chr6_4:24541832-24541851 None:intergenic 35.0%
TTATTCGTTGTTACAGGGAA+TGG - chr6_4:24541906-24541925 Msa0983030:exon 35.0%
AACAGCAATGATCAAACCAA+CGG - chr6_4:24541942-24541961 Msa0983030:CDS 35.0%
TGCAATTGACATGAGACTAA+AGG + chr6_4:24542016-24542035 None:intergenic 35.0%
TTTAGTCTCATGTCAATTGC+AGG - chr6_4:24542015-24542034 Msa0983030:CDS 35.0%
! CCAAGACCCTATTGTTATTA+GGG + chr6_4:24542098-24542117 None:intergenic 35.0%
! TCCAAGACCCTATTGTTATT+AGG + chr6_4:24542099-24542118 None:intergenic 35.0%
! GATAAAAACATGAGTGCTGT+TGG + chr6_4:24542231-24542250 None:intergenic 35.0%
AGCAAGAAAGAATAACAGTG+TGG + chr6_4:24542253-24542272 None:intergenic 35.0%
TGGTTCCAACTGATAAACTA+AGG - chr6_4:24542421-24542440 Msa0983030:CDS 35.0%
TCCAACTGATAAACTAAGGT+AGG - chr6_4:24542425-24542444 Msa0983030:CDS 35.0%
ACCTACCTTAGTTTATCAGT+TGG + chr6_4:24542429-24542448 None:intergenic 35.0%
GAACAAGATATAGCATGTGA+TGG - chr6_4:24542552-24542571 Msa0983030:CDS 35.0%
GTTATTCCATTATGGTCTAG+TGG - chr6_4:24542642-24542661 Msa0983030:CDS 35.0%
GAGCGTTATCAATATAGGTA+CGG - chr6_4:24542767-24542786 Msa0983030:intron 35.0%
ATGCTAAAGGAATAAGAACG+CGG + chr6_4:24542818-24542837 None:intergenic 35.0%
! CTTTAGCATCGAAGATAAGA+GGG - chr6_4:24542829-24542848 Msa0983030:CDS 35.0%
GATCAGTGCAAAGAAAAGAA+TGG - chr6_4:24542863-24542882 Msa0983030:CDS 35.0%
GCAAAGAAAAGAATGGGAAT+TGG - chr6_4:24542870-24542889 Msa0983030:CDS 35.0%
!!! CAGCGATTTTTGAGACTATA+AGG - chr6_4:24542925-24542944 Msa0983030:CDS 35.0%
! TCTGAAGCAGTCAATTTCAT+AGG - chr6_4:24543023-24543042 Msa0983030:CDS 35.0%
GTAGAAAACACTACTTCAAG+AGG - chr6_4:24543161-24543180 Msa0983030:CDS 35.0%
TTACTTAACTCTTCAACTGC+AGG + chr6_4:24543311-24543330 None:intergenic 35.0%
TGCAGTTGAAGAGTTAAGTA+AGG - chr6_4:24543310-24543329 Msa0983030:exon 35.0%
! AGTAAGGATTAATGGCTTTG+TGG - chr6_4:24543326-24543345 Msa0983030:five_prime_UTR 35.0%
! CGTTTTTGTCACAAATGAGT+AGG - chr6_4:24543456-24543475 Msa0983030:five_prime_UTR 35.0%
! ATTTAAGATACTCGAACGCA+TGG + chr6_4:24543599-24543618 None:intergenic 35.0%
AATGAAAAGTCGCAACTTCA+AGG - chr6_4:24543693-24543712 Msa0983030:five_prime_UTR 35.0%
CCTTGTAAATAGGGATTGAG+GGG - chr6_4:24541521-24541540 Msa0983030:three_prime_UTR 40.0%
CTTGTAAATAGGGATTGAGG+GGG - chr6_4:24541522-24541541 Msa0983030:three_prime_UTR 40.0%
TGGGAAGATTTGAACGAACA+TGG - chr6_4:24541642-24541661 Msa0983030:three_prime_UTR 40.0%
CGATCAATCACCAACATCAT+GGG - chr6_4:24541969-24541988 Msa0983030:CDS 40.0%
ATCACCAACATCATGGGAAA+TGG - chr6_4:24541975-24541994 Msa0983030:CDS 40.0%
! ATTGCCATTTCCCATGATGT+TGG + chr6_4:24541982-24542001 None:intergenic 40.0%
GTTTCATGTTCCATGGCATT+TGG - chr6_4:24542045-24542064 Msa0983030:CDS 40.0%
CCCTAATAACAATAGGGTCT+TGG - chr6_4:24542095-24542114 Msa0983030:CDS 40.0%
!! GGTGAATTTTTAGGCGGTAA+TGG + chr6_4:24542366-24542385 None:intergenic 40.0%
! GATTTGAGTCCTTGTTGTGA+TGG + chr6_4:24542398-24542417 None:intergenic 40.0%
ATGGTTCAAGAATAAACCCC+TGG - chr6_4:24542571-24542590 Msa0983030:CDS 40.0%
TCTACTGTGCATAGATTCCA+GGG + chr6_4:24542591-24542610 None:intergenic 40.0%
ATCTACTGTGCATAGATTCC+AGG + chr6_4:24542592-24542611 None:intergenic 40.0%
ATGATCCCACTAGACCATAA+TGG + chr6_4:24542651-24542670 None:intergenic 40.0%
ATCATGATGACCCTTAGCAT+TGG - chr6_4:24542666-24542685 Msa0983030:CDS 40.0%
AAATGAGCCTCCAATGCTAA+GGG + chr6_4:24542679-24542698 None:intergenic 40.0%
AAAATGAGCCTCCAATGCTA+AGG + chr6_4:24542680-24542699 None:intergenic 40.0%
CCTCTTATCTTCGATGCTAA+AGG + chr6_4:24542831-24542850 None:intergenic 40.0%
! CCTTTAGCATCGAAGATAAG+AGG - chr6_4:24542828-24542847 Msa0983030:CDS 40.0%
! TTCTTTGCACTGATCGTAAC+TGG + chr6_4:24542858-24542877 None:intergenic 40.0%
! AAATGCGAACGATGGAGTTT+TGG - chr6_4:24542953-24542972 Msa0983030:CDS 40.0%
!!! CGATGGAGTTTTGGAAATGT+CGG - chr6_4:24542962-24542981 Msa0983030:CDS 40.0%
!! TTTTGGAAATGTCGGCATTG+TGG - chr6_4:24542970-24542989 Msa0983030:CDS 40.0%
ATACCAGCTAGACAAAGTTG+AGG + chr6_4:24543002-24543021 None:intergenic 40.0%
GCAACACTAGACATAGTACT+TGG + chr6_4:24543077-24543096 None:intergenic 40.0%
GAAAACACTACTTCAAGAGG+AGG - chr6_4:24543164-24543183 Msa0983030:CDS 40.0%
ACTTCAAGAGGAGGAAAAGA+TGG - chr6_4:24543173-24543192 Msa0983030:CDS 40.0%
CTTCAAGAGGAGGAAAAGAT+GGG - chr6_4:24543174-24543193 Msa0983030:CDS 40.0%
!! TTAGTTTGCAGTTGGGCTTA+TGG - chr6_4:24543284-24543303 Msa0983030:CDS 40.0%
TCACAAATGAGTAGGCTTGA+TGG - chr6_4:24543464-24543483 Msa0983030:five_prime_UTR 40.0%
CCTTGTAAATAGGGATTGAG+GGG - chr6_4:24541521-24541540 Msa0983030:three_prime_UTR 40.0%
CTTGTAAATAGGGATTGAGG+GGG - chr6_4:24541522-24541541 Msa0983030:three_prime_UTR 40.0%
TGGGAAGATTTGAACGAACA+TGG - chr6_4:24541642-24541661 Msa0983030:three_prime_UTR 40.0%
CGATCAATCACCAACATCAT+GGG - chr6_4:24541969-24541988 Msa0983030:CDS 40.0%
ATCACCAACATCATGGGAAA+TGG - chr6_4:24541975-24541994 Msa0983030:CDS 40.0%
! ATTGCCATTTCCCATGATGT+TGG + chr6_4:24541982-24542001 None:intergenic 40.0%
GTTTCATGTTCCATGGCATT+TGG - chr6_4:24542045-24542064 Msa0983030:CDS 40.0%
CCCTAATAACAATAGGGTCT+TGG - chr6_4:24542095-24542114 Msa0983030:CDS 40.0%
!! GGTGAATTTTTAGGCGGTAA+TGG + chr6_4:24542366-24542385 None:intergenic 40.0%
! GATTTGAGTCCTTGTTGTGA+TGG + chr6_4:24542398-24542417 None:intergenic 40.0%
ATGGTTCAAGAATAAACCCC+TGG - chr6_4:24542571-24542590 Msa0983030:CDS 40.0%
TCTACTGTGCATAGATTCCA+GGG + chr6_4:24542591-24542610 None:intergenic 40.0%
ATCTACTGTGCATAGATTCC+AGG + chr6_4:24542592-24542611 None:intergenic 40.0%
ATGATCCCACTAGACCATAA+TGG + chr6_4:24542651-24542670 None:intergenic 40.0%
ATCATGATGACCCTTAGCAT+TGG - chr6_4:24542666-24542685 Msa0983030:CDS 40.0%
AAATGAGCCTCCAATGCTAA+GGG + chr6_4:24542679-24542698 None:intergenic 40.0%
AAAATGAGCCTCCAATGCTA+AGG + chr6_4:24542680-24542699 None:intergenic 40.0%
CCTCTTATCTTCGATGCTAA+AGG + chr6_4:24542831-24542850 None:intergenic 40.0%
! CCTTTAGCATCGAAGATAAG+AGG - chr6_4:24542828-24542847 Msa0983030:CDS 40.0%
! TTCTTTGCACTGATCGTAAC+TGG + chr6_4:24542858-24542877 None:intergenic 40.0%
! AAATGCGAACGATGGAGTTT+TGG - chr6_4:24542953-24542972 Msa0983030:CDS 40.0%
!!! CGATGGAGTTTTGGAAATGT+CGG - chr6_4:24542962-24542981 Msa0983030:CDS 40.0%
!! TTTTGGAAATGTCGGCATTG+TGG - chr6_4:24542970-24542989 Msa0983030:CDS 40.0%
ATACCAGCTAGACAAAGTTG+AGG + chr6_4:24543002-24543021 None:intergenic 40.0%
GCAACACTAGACATAGTACT+TGG + chr6_4:24543077-24543096 None:intergenic 40.0%
GAAAACACTACTTCAAGAGG+AGG - chr6_4:24543164-24543183 Msa0983030:CDS 40.0%
ACTTCAAGAGGAGGAAAAGA+TGG - chr6_4:24543173-24543192 Msa0983030:CDS 40.0%
CTTCAAGAGGAGGAAAAGAT+GGG - chr6_4:24543174-24543193 Msa0983030:CDS 40.0%
!! TTAGTTTGCAGTTGGGCTTA+TGG - chr6_4:24543284-24543303 Msa0983030:CDS 40.0%
TCACAAATGAGTAGGCTTGA+TGG - chr6_4:24543464-24543483 Msa0983030:five_prime_UTR 40.0%
CCCCTCAATCCCTATTTACA+AGG + chr6_4:24541524-24541543 None:intergenic 45.0%
ATCCTGATGCAGTTACAGTG+TGG - chr6_4:24541684-24541703 Msa0983030:three_prime_UTR 45.0%
AACCACACTGTAACTGCATC+AGG + chr6_4:24541689-24541708 None:intergenic 45.0%
GTGGTTATACACGTACGTAG+AGG - chr6_4:24541703-24541722 Msa0983030:three_prime_UTR 45.0%
AGAGGCTAGCAGTTACAATG+TGG - chr6_4:24541721-24541740 Msa0983030:three_prime_UTR 45.0%
TCATCATGAGGTTCAGCTCA+GGG + chr6_4:24541852-24541871 None:intergenic 45.0%
TTCATCATGAGGTTCAGCTC+AGG + chr6_4:24541853-24541872 None:intergenic 45.0%
TACAGGGAATGGCATTGTTG+TGG - chr6_4:24541917-24541936 Msa0983030:CDS 45.0%
GCAATGATCAAACCAACGGA+AGG - chr6_4:24541946-24541965 Msa0983030:CDS 45.0%
GCGATCAATCACCAACATCA+TGG - chr6_4:24541968-24541987 Msa0983030:CDS 45.0%
TGCTGGTGTTTCATGTTCCA+TGG - chr6_4:24542038-24542057 Msa0983030:CDS 45.0%
CGCAAAACTAGCGAACAAGT+TGG + chr6_4:24542307-24542326 None:intergenic 45.0%
CAACAAGGACTCAAATCTCG+TGG - chr6_4:24542401-24542420 Msa0983030:CDS 45.0%
CTACTGTGCATAGATTCCAG+GGG + chr6_4:24542590-24542609 None:intergenic 45.0%
! ATGATGACCCTTAGCATTGG+AGG - chr6_4:24542669-24542688 Msa0983030:CDS 45.0%
GGAGGTGATATGTCTGTTCA+AGG + chr6_4:24542721-24542740 None:intergenic 45.0%
!! CTCCAACTTTGAAGTTCCAG+CGG - chr6_4:24542737-24542756 Msa0983030:intron 45.0%
!! TCCAACTTTGAAGTTCCAGC+GGG - chr6_4:24542738-24542757 Msa0983030:intron 45.0%
AGGAGAAGAAATGCGAACGA+TGG - chr6_4:24542945-24542964 Msa0983030:CDS 45.0%
! TTCGCTTTCTGGATTGGGAA+TGG - chr6_4:24543100-24543119 Msa0983030:CDS 45.0%
GAAAAGTCGCAACTTCAAGG+AGG - chr6_4:24543696-24543715 Msa0983030:five_prime_UTR 45.0%
CCCCTCAATCCCTATTTACA+AGG + chr6_4:24541524-24541543 None:intergenic 45.0%
ATCCTGATGCAGTTACAGTG+TGG - chr6_4:24541684-24541703 Msa0983030:three_prime_UTR 45.0%
AACCACACTGTAACTGCATC+AGG + chr6_4:24541689-24541708 None:intergenic 45.0%
GTGGTTATACACGTACGTAG+AGG - chr6_4:24541703-24541722 Msa0983030:three_prime_UTR 45.0%
AGAGGCTAGCAGTTACAATG+TGG - chr6_4:24541721-24541740 Msa0983030:three_prime_UTR 45.0%
TCATCATGAGGTTCAGCTCA+GGG + chr6_4:24541852-24541871 None:intergenic 45.0%
TTCATCATGAGGTTCAGCTC+AGG + chr6_4:24541853-24541872 None:intergenic 45.0%
TACAGGGAATGGCATTGTTG+TGG - chr6_4:24541917-24541936 Msa0983030:CDS 45.0%
GCAATGATCAAACCAACGGA+AGG - chr6_4:24541946-24541965 Msa0983030:CDS 45.0%
GCGATCAATCACCAACATCA+TGG - chr6_4:24541968-24541987 Msa0983030:CDS 45.0%
TGCTGGTGTTTCATGTTCCA+TGG - chr6_4:24542038-24542057 Msa0983030:CDS 45.0%
CGCAAAACTAGCGAACAAGT+TGG + chr6_4:24542307-24542326 None:intergenic 45.0%
CAACAAGGACTCAAATCTCG+TGG - chr6_4:24542401-24542420 Msa0983030:CDS 45.0%
CTACTGTGCATAGATTCCAG+GGG + chr6_4:24542590-24542609 None:intergenic 45.0%
! ATGATGACCCTTAGCATTGG+AGG - chr6_4:24542669-24542688 Msa0983030:CDS 45.0%
GGAGGTGATATGTCTGTTCA+AGG + chr6_4:24542721-24542740 None:intergenic 45.0%
!! CTCCAACTTTGAAGTTCCAG+CGG - chr6_4:24542737-24542756 Msa0983030:intron 45.0%
!! TCCAACTTTGAAGTTCCAGC+GGG - chr6_4:24542738-24542757 Msa0983030:intron 45.0%
AGGAGAAGAAATGCGAACGA+TGG - chr6_4:24542945-24542964 Msa0983030:CDS 45.0%
! TTCGCTTTCTGGATTGGGAA+TGG - chr6_4:24543100-24543119 Msa0983030:CDS 45.0%
GAAAAGTCGCAACTTCAAGG+AGG - chr6_4:24543696-24543715 Msa0983030:five_prime_UTR 45.0%
! TGATGCGCTAGCCTCTATGA+TGG + chr6_4:24541778-24541797 None:intergenic 50.0%
GTGGTCTGTATCCGCAATTG+CGG + chr6_4:24541813-24541832 None:intergenic 50.0%
CTCATGTCAATTGCAGGTGC+TGG - chr6_4:24542021-24542040 Msa0983030:CDS 50.0%
TTGGTCTGCACCAAATGCCA+TGG + chr6_4:24542058-24542077 None:intergenic 50.0%
CGCTGGAACTTCAAAGTTGG+AGG + chr6_4:24542739-24542758 None:intergenic 50.0%
TCCCGCTGGAACTTCAAAGT+TGG + chr6_4:24542742-24542761 None:intergenic 50.0%
ATAACGCTCAAAGATCCCGC+TGG + chr6_4:24542756-24542775 None:intergenic 50.0%
GCACCTCAACTTTGTCTAGC+TGG - chr6_4:24542996-24543015 Msa0983030:CDS 50.0%
! AGTGTTGCTGCTTCGCTTTC+TGG - chr6_4:24543089-24543108 Msa0983030:CDS 50.0%
! TGCTGCTTCGCTTTCTGGAT+TGG - chr6_4:24543094-24543113 Msa0983030:CDS 50.0%
GCTGCTTCGCTTTCTGGATT+GGG - chr6_4:24543095-24543114 Msa0983030:CDS 50.0%
CAAGAGGAGGAAAAGATGGG+TGG - chr6_4:24543177-24543196 Msa0983030:CDS 50.0%
! TGATGCGCTAGCCTCTATGA+TGG + chr6_4:24541778-24541797 None:intergenic 50.0%
GTGGTCTGTATCCGCAATTG+CGG + chr6_4:24541813-24541832 None:intergenic 50.0%
CTCATGTCAATTGCAGGTGC+TGG - chr6_4:24542021-24542040 Msa0983030:CDS 50.0%
TTGGTCTGCACCAAATGCCA+TGG + chr6_4:24542058-24542077 None:intergenic 50.0%
CGCTGGAACTTCAAAGTTGG+AGG + chr6_4:24542739-24542758 None:intergenic 50.0%
TCCCGCTGGAACTTCAAAGT+TGG + chr6_4:24542742-24542761 None:intergenic 50.0%
ATAACGCTCAAAGATCCCGC+TGG + chr6_4:24542756-24542775 None:intergenic 50.0%
GCACCTCAACTTTGTCTAGC+TGG - chr6_4:24542996-24543015 Msa0983030:CDS 50.0%
! AGTGTTGCTGCTTCGCTTTC+TGG - chr6_4:24543089-24543108 Msa0983030:CDS 50.0%
! TGCTGCTTCGCTTTCTGGAT+TGG - chr6_4:24543094-24543113 Msa0983030:CDS 50.0%
GCTGCTTCGCTTTCTGGATT+GGG - chr6_4:24543095-24543114 Msa0983030:CDS 50.0%
CAAGAGGAGGAAAAGATGGG+TGG - chr6_4:24543177-24543196 Msa0983030:CDS 50.0%
CGCAACTGCGGTGTGAACTT+CGG + chr6_4:24541747-24541766 None:intergenic 55.0%
CGAAGTTCACACCGCAGTTG+CGG - chr6_4:24541745-24541764 Msa0983030:three_prime_UTR 55.0%
ATGGCATCACACCGCAACTG+CGG + chr6_4:24541759-24541778 None:intergenic 55.0%
GCGGTGTGATGCCATCATAG+AGG - chr6_4:24541764-24541783 Msa0983030:three_prime_UTR 55.0%
GGTGATTGATCGCCTTCCGT+TGG + chr6_4:24541961-24541980 None:intergenic 55.0%
! TCTGGATTGGGAATGGCTGC+AGG - chr6_4:24543107-24543126 Msa0983030:CDS 55.0%
CGCAACTGCGGTGTGAACTT+CGG + chr6_4:24541747-24541766 None:intergenic 55.0%
CGAAGTTCACACCGCAGTTG+CGG - chr6_4:24541745-24541764 Msa0983030:three_prime_UTR 55.0%
ATGGCATCACACCGCAACTG+CGG + chr6_4:24541759-24541778 None:intergenic 55.0%
GCGGTGTGATGCCATCATAG+AGG - chr6_4:24541764-24541783 Msa0983030:three_prime_UTR 55.0%
GGTGATTGATCGCCTTCCGT+TGG + chr6_4:24541961-24541980 None:intergenic 55.0%
! TCTGGATTGGGAATGGCTGC+AGG - chr6_4:24543107-24543126 Msa0983030:CDS 55.0%
GGGAATGGCTGCAGGAAGCT+TGG - chr6_4:24543115-24543134 Msa0983030:CDS 60.0%
GGGAATGGCTGCAGGAAGCT+TGG - chr6_4:24543115-24543134 Msa0983030:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 24541518 24543727 24541518 ID=Msa0983030;Name=Msa0983030
chr6_4 mRNA 24541518 24543727 24541518 ID=Msa0983030-mRNA-1;Parent=Msa0983030;Name=Msa0983030-mRNA-1;_AED=0.02;_eAED=0.02;_QI=407|1|1|1|1|1|2|390|445
chr6_4 exon 24541518 24542727 24541518 ID=Msa0983030-mRNA-1:exon:7295;Parent=Msa0983030-mRNA-1
chr6_4 exon 24542803 24543727 24542803 ID=Msa0983030-mRNA-1:exon:7294;Parent=Msa0983030-mRNA-1
chr6_4 five_prime_UTR 24543321 24543727 24543321 ID=Msa0983030-mRNA-1:five_prime_utr;Parent=Msa0983030-mRNA-1
chr6_4 CDS 24542803 24543320 24542803 ID=Msa0983030-mRNA-1:cds;Parent=Msa0983030-mRNA-1
chr6_4 CDS 24541908 24542727 24541908 ID=Msa0983030-mRNA-1:cds;Parent=Msa0983030-mRNA-1
chr6_4 three_prime_UTR 24541518 24541907 24541518 ID=Msa0983030-mRNA-1:three_prime_utr;Parent=Msa0983030-mRNA-1
Gene Sequence

>Msa0983030

ATGGCATTGTTGTGGTTAACAGCAATGATCAAACCAACGGAAGGCGATCAATCACCAACATCATGGGAAATGGCAATGTTAATATCTGCCTTTAGTCTCATGTCAATTGCAGGTGCTGGTGTTTCATGTTCCATGGCATTTGGTGCAGACCAAGTAAATATAAAAGATAACCCTAATAACAATAGGGTCTTGGAAATGTTTTTCAACTGGTATTATGCTTTTGCAAGTATCTCTGCGATAATAGCTCTCACTGTAATAGTATATATCCAAGATCATTTTGGTTGGAAAATTGGTTTTGGAGTTCCAACAGCACTCATGTTTTTATCCACACTGTTATTCTTTCTTGCTTCTCCTCTTTATGTAAAGATTCAAAAAAGAACCAACTTGTTCGCTAGTTTTGCGCAAGTAATCGTTGCTTCCTATAACAACAGAAAACTTCCATTACCGCCTAAAAATTCACCTCAATTTTACCATCACAACAAGGACTCAAATCTCGTGGTTCCAACTGATAAACTAAGGTTTCTGAACAAAGCTTGTGTTATTAAGGAATTTGAACAAGATATAGCATGTGATGGTTCAAGAATAAACCCCTGGAATCTATGCACAGTAGATCAAGTAGAAGAATTAAAAGCCATTGTGAGAGTTATTCCATTATGGTCTAGTGGGATCATGATGACCCTTAGCATTGGAGGCTCATTTTCATTGCTTCAAGCTAAAACCTTGAACAGACATATCACCTCCAACTTTGAAGTTCCAGCGGGATCTTTGAGCGTTATCAATATAGGTACGGTAATTATATGGATAGTTTTCTATGACCGCGTTCTTATTCCTTTAGCATCGAAGATAAGAGGGAAACCAGTTACGATCAGTGCAAAGAAAAGAATGGGAATTGGTTTGTTTTTATCTTTTCTCTACTCGGTAAATGCAGCGATTTTTGAGACTATAAGGAGAAGAAATGCGAACGATGGAGTTTTGGAAATGTCGGCATTGTGGCTTGCACCTCAACTTTGTCTAGCTGGTATATCTGAAGCAGTCAATTTCATAGGCCAAAATGAGTTTTATTATACAGAGTTTCCAAGTACTATGTCTAGTGTTGCTGCTTCGCTTTCTGGATTGGGAATGGCTGCAGGAAGCTTGGTATCATCTTTACTGTTCAGCATTGTAGAAAACACTACTTCAAGAGGAGGAAAAGATGGGTGGATTTCTGATGATATTAACAAGGGTCATTTTGACAAATACTCTTGGCTTATAACTGGAGTTAGTGCCCTTAATATACTCTATTATTTAGTTTGCAGTTGGGCTTATGGACCTGCAGTTGAAGAGTTAAGTAAGGATTAA

Protein sequence

>Msa0983030

MALLWLTAMIKPTEGDQSPTSWEMAMLISAFSLMSIAGAGVSCSMAFGADQVNIKDNPNNNRVLEMFFNWYYAFASISAIIALTVIVYIQDHFGWKIGFGVPTALMFLSTLLFFLASPLYVKIQKRTNLFASFAQVIVASYNNRKLPLPPKNSPQFYHHNKDSNLVVPTDKLRFLNKACVIKEFEQDIACDGSRINPWNLCTVDQVEELKAIVRVIPLWSSGIMMTLSIGGSFSLLQAKTLNRHITSNFEVPAGSLSVINIGTVIIWIVFYDRVLIPLASKIRGKPVTISAKKRMGIGLFLSFLYSVNAAIFETIRRRNANDGVLEMSALWLAPQLCLAGISEAVNFIGQNEFYYTEFPSTMSSVAASLSGLGMAAGSLVSSLLFSIVENTTSRGGKDGWISDDINKGHFDKYSWLITGVSALNILYYLVCSWAYGPAVEELSKD*