AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62289


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62289.t1 MTR_3g066060 98.305 236 4 0 1 236 1 236 9.74e-172 474
MS.gene62289.t1 MTR_1g115500 60.989 182 71 0 55 236 3 184 9.90e-82 244
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62289.t1 AT5G16710 66.079 227 67 3 20 236 4 230 8.75e-108 312
MS.gene62289.t1 AT1G75270 62.842 183 67 1 55 236 3 185 7.72e-84 249
MS.gene62289.t1 AT1G19570 59.563 183 73 1 55 236 3 185 3.79e-77 233
MS.gene62289.t1 AT1G19550 47.794 136 48 1 101 236 13 125 1.18e-36 127

Find 66 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTAAATCAACCAATTT+TGG 0.139790 3.2:+61290344 None:intergenic
AGCAACACCCTTTGGCTAAA+AGG 0.227026 3.2:+61290398 None:intergenic
TTTACCTTATGAGCCAAAAT+TGG 0.268108 3.2:-61290357 MS.gene62289:CDS
TGCTTGTTCGGTTCCGTCAT+TGG 0.307313 3.2:+61289448 None:intergenic
CTTTCCATCAAAATTTATTA+CGG 0.320003 3.2:+61290175 None:intergenic
TTACAGTCTCCAATCTTGTT+AGG 0.323971 3.2:+61292411 None:intergenic
CTTTGGGACATTATAAGAAA+TGG 0.339739 3.2:-61288780 MS.gene62289:CDS
TACCATTTGGAGATTGCTTT+GGG 0.358598 3.2:-61288796 MS.gene62289:CDS
CTAGTTGAAACAGCGTAGTT+TGG 0.375736 3.2:+61292537 None:intergenic
TTCATTTAGTAATGCTTGTT+CGG 0.380196 3.2:+61289436 None:intergenic
GGACAAGAAGATCACCATTC+TGG 0.384402 3.2:+61290317 None:intergenic
CTTACCACTCCTAACAAGAT+TGG 0.386618 3.2:-61292420 MS.gene62289:CDS
TACCTTCAGGACTGATTTCA+AGG 0.389717 3.2:+61290204 None:intergenic
TTTCCATCAAAATTTATTAC+GGG 0.394965 3.2:+61290176 None:intergenic
GCTTGTTCGGTTCCGTCATT+GGG 0.399278 3.2:+61289449 None:intergenic
ATACCATTTGGAGATTGCTT+TGG 0.401508 3.2:-61288797 MS.gene62289:CDS
TGTTCCTCCTTCTGAGCCAT+TGG 0.402497 3.2:-61292463 MS.gene62289:CDS
CTTCAAGTAAGACTTCAAAA+AGG 0.430278 3.2:+61288738 None:intergenic
TTCCTTGAGGTAATCGTTGA+AGG 0.431943 3.2:+61289406 None:intergenic
ATAGCTTTGGTCCTAGTGAT+AGG 0.433953 3.2:+61288818 None:intergenic
ATTACGGGAACTTTACCTTC+AGG 0.438595 3.2:+61290191 None:intergenic
TCAGGTGGTGTCACCAATGG+TGG 0.440607 3.2:+61290098 None:intergenic
ATCTCCAAATGGTATAGCTT+TGG 0.443085 3.2:+61288805 None:intergenic
AATGCTGAAACCGTTGTTGA+AGG 0.445494 3.2:+61292512 None:intergenic
AGGACCAAAGCTATACCATT+TGG 0.449238 3.2:-61288809 MS.gene62289:CDS
GGTGTCACCAATGGTGGGCT+AGG 0.458979 3.2:+61290104 None:intergenic
ACGGTAACGAAGGTGGTTAA+CGG 0.463252 3.2:+61292560 None:intergenic
CCAGTGTCAGCAACACCCTT+TGG 0.465405 3.2:+61290390 None:intergenic
ATTGGTGACACCACCTGAAA+AGG 0.468553 3.2:-61290093 MS.gene62289:CDS
GCAACACCCTTTGGCTAAAA+GGG 0.469686 3.2:+61290399 None:intergenic
TGAAGCACTCCTTTAGCAAT+CGG 0.473922 3.2:+61288270 None:intergenic
ATGTCTTTCCCATTGACAAA+AGG 0.494992 3.2:+61288853 None:intergenic
AGATTTAATCACACAAACAT+TGG 0.497857 3.2:-61290138 MS.gene62289:CDS
GCAATCGGTATTTGCACAGA+AGG 0.512203 3.2:+61288285 None:intergenic
AGTTAGTACTTTACCGGCTG+CGG 0.521500 3.2:+61288241 None:intergenic
GTCCCAAAGCAATCTCCAAA+TGG 0.525825 3.2:+61288794 None:intergenic
TGCTTCATAACAACCGCAGC+CGG 0.527424 3.2:-61288254 MS.gene62289:CDS
CCAAAGGGTGTTGCTGACAC+TGG 0.528417 3.2:-61290390 MS.gene62289:CDS
GCAACTTCCAATGGCTCAGA+AGG 0.530234 3.2:+61292456 None:intergenic
GTGCAAATACCGATTGCTAA+AGG 0.534333 3.2:-61288279 MS.gene62289:CDS
GCTTTAACAGCAACTTCCAA+TGG 0.538010 3.2:+61292447 None:intergenic
ATTTAAGAAACAAACCAGAA+TGG 0.544999 3.2:-61290331 MS.gene62289:intron
TGAATTCTAACGGTGGACAT+TGG 0.546517 3.2:+61292609 None:intergenic
CAGGTGGTGTCACCAATGGT+GGG 0.551034 3.2:+61290099 None:intergenic
GAAGTATCCTAGCCCACCAT+TGG 0.558980 3.2:-61290111 MS.gene62289:CDS
TTTAATCACACAAACATTGG+AGG 0.562440 3.2:-61290135 MS.gene62289:CDS
TTCCTTGAAATCAGTCCTGA+AGG 0.565919 3.2:-61290206 MS.gene62289:CDS
CAATCGGTATTTGCACAGAA+GGG 0.571881 3.2:+61288286 None:intergenic
TCAACTAGCTCCTTCAACAA+CGG 0.572004 3.2:-61292522 MS.gene62289:CDS
TGCTGAAACTTGAATTCTAA+CGG 0.573659 3.2:+61292599 None:intergenic
GTCTCCAATCTTGTTAGGAG+TGG 0.575745 3.2:+61292416 None:intergenic
ACGAAGGTGGTTAACGGTGG+CGG 0.577042 3.2:+61292566 None:intergenic
CAGAAGACATTGATACTCGA+AGG 0.592953 3.2:+61292484 None:intergenic
TTGAAACAGCGTAGTTTGGA+CGG 0.597450 3.2:+61292541 None:intergenic
CTCCTTCAACGATTACCTCA+AGG 0.601777 3.2:-61289408 MS.gene62289:CDS
AGTTTGGACGGTAACGAAGG+TGG 0.608421 3.2:+61292553 None:intergenic
ACTTCCAATGGCTCAGAAGG+AGG 0.609075 3.2:+61292459 None:intergenic
CGTAGTTTGGACGGTAACGA+AGG 0.614958 3.2:+61292550 None:intergenic
AGAAGACATTGATACTCGAA+GGG 0.617788 3.2:+61292485 None:intergenic
AAGAGCAAAGATCCCAATGA+CGG 0.635929 3.2:-61289461 MS.gene62289:CDS
AAGGGTGTTGCTGACACTGG+AGG 0.656952 3.2:-61290387 MS.gene62289:CDS
TCTGCGGCTGACCTATCACT+AGG 0.671764 3.2:-61288829 MS.gene62289:CDS
GAAGACATTGATACTCGAAG+GGG 0.692229 3.2:+61292486 None:intergenic
CAATGGGAAAGACATATCTG+CGG 0.722193 3.2:-61288845 MS.gene62289:CDS
GTAACGAAGGTGGTTAACGG+TGG 0.742876 3.2:+61292563 None:intergenic
TGAAACTTGAATTCTAACGG+TGG 0.756125 3.2:+61292602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATATATATTATTATCATT+TGG - chr3.2:61291729-61291748 MS.gene62289:intron 10.0%
!! TTATATAAATAAAAATGTGT+TGG + chr3.2:61291871-61291890 None:intergenic 10.0%
!!! TTTTTATTTATATAACTTTG+AGG - chr3.2:61291876-61291895 MS.gene62289:intron 10.0%
!! AAAATTTGCAATACATTTAT+AGG + chr3.2:61288905-61288924 None:intergenic 15.0%
!! AAATTTGCAATACATTTATA+GGG + chr3.2:61288904-61288923 None:intergenic 15.0%
!! ATAAGAAATTGCAAAAAATT+TGG + chr3.2:61288790-61288809 None:intergenic 15.0%
!! TTGTAAACTTTATGAATAAT+TGG - chr3.2:61291764-61291783 MS.gene62289:intron 15.0%
!!! AGCAAAAAAAAACTATTTTT+AGG - chr3.2:61289451-61289470 MS.gene62289:CDS 15.0%
!!! TTTTAAACTTTCAGTATTTT+AGG - chr3.2:61291529-61291548 MS.gene62289:intron 15.0%
!! AAAGTTCAAAATTGCAAAAA+CGG + chr3.2:61292482-61292501 None:intergenic 20.0%
!! AAATAACTAAAACCATGAAA+AGG + chr3.2:61288482-61288501 None:intergenic 20.0%
!! AAATCAAAGAACAAAGATAA+AGG + chr3.2:61290280-61290299 None:intergenic 20.0%
!! AAGAAAAAAAAGGTTTACAA+AGG + chr3.2:61292428-61292447 None:intergenic 20.0%
!! AATAACTAAAACCATGAAAA+GGG + chr3.2:61288481-61288500 None:intergenic 20.0%
!! AATTTGCAATACATTTATAG+GGG + chr3.2:61288903-61288922 None:intergenic 20.0%
!! AGTAAGTAAAAATACATTCA+AGG + chr3.2:61291071-61291090 None:intergenic 20.0%
!! CAACAAAACAAATTATTACA+AGG + chr3.2:61290624-61290643 None:intergenic 20.0%
!! CGAATATATGAAGAAAAAAA+AGG + chr3.2:61292438-61292457 None:intergenic 20.0%
!! CTTTCCATCAAAATTTATTA+CGG + chr3.2:61290685-61290704 None:intergenic 20.0%
!! GGTTTATATAAGAAATTCAA+GGG + chr3.2:61288820-61288839 None:intergenic 20.0%
!! GTAAACATTAAAGAACAAAA+AGG + chr3.2:61291283-61291302 None:intergenic 20.0%
!! GTTTATATAAGAAATTCAAG+GGG + chr3.2:61288819-61288838 None:intergenic 20.0%
!! TATAATAGACCAAATACATT+AGG + chr3.2:61289488-61289507 None:intergenic 20.0%
!! TATATAAACCCCTATAAATT+GGG - chr3.2:61288830-61288849 MS.gene62289:CDS 20.0%
!! TTATATAAACCCCTATAAAT+TGG - chr3.2:61288829-61288848 MS.gene62289:CDS 20.0%
!! TTTCCATCAAAATTTATTAC+GGG + chr3.2:61290684-61290703 None:intergenic 20.0%
!! TTTGTAATTTCAATGTATTC+AGG - chr3.2:61291205-61291224 MS.gene62289:intron 20.0%
!! TTTGTTCTTTAATGTTTACA+TGG - chr3.2:61291284-61291303 MS.gene62289:intron 20.0%
!!! AAGATCTTTTCTACATTTAT+TGG - chr3.2:61291366-61291385 MS.gene62289:intron 20.0%
!!! AATAAATTTTGATGGAAAGT+GGG - chr3.2:61290686-61290705 MS.gene62289:intron 20.0%
!!! CATAAGTTTTGAAAATGTTT+AGG - chr3.2:61289054-61289073 MS.gene62289:intron 20.0%
!!! CTTGTAATAATTTGTTTTGT+TGG - chr3.2:61290622-61290641 MS.gene62289:intron 20.0%
!!! GACACATTTTATAAGAAAAA+AGG + chr3.2:61291954-61291973 None:intergenic 20.0%
!!! TAATAAATTTTGATGGAAAG+TGG - chr3.2:61290685-61290704 MS.gene62289:intron 20.0%
!!! TTGTAATTTTGATATACTCA+GGG + chr3.2:61291042-61291061 None:intergenic 20.0%
!!! TTTCTTAAATCAACCAATTT+TGG + chr3.2:61290516-61290535 None:intergenic 20.0%
!!! TTTGTAATTTTGATATACTC+AGG + chr3.2:61291043-61291062 None:intergenic 20.0%
!!! TTTGTTCTTTGATTTAATTG+TGG - chr3.2:61290285-61290304 MS.gene62289:intron 20.0%
!!! TTTTAGTTATTTTCAGTGTT+TGG - chr3.2:61288490-61288509 MS.gene62289:intron 20.0%
!!! TTTTTGCTTATAAATATGAC+TGG - chr3.2:61289550-61289569 MS.gene62289:intron 20.0%
! AAAGAAATTGCCCAATTTAT+AGG + chr3.2:61288843-61288862 None:intergenic 25.0%
! AAATTATAGACAAATCCAGA+AGG + chr3.2:61291923-61291942 None:intergenic 25.0%
! AAATTGCAAAAAATTTGGAC+CGG + chr3.2:61288785-61288804 None:intergenic 25.0%
! AAGAAATTGCCCAATTTATA+GGG + chr3.2:61288842-61288861 None:intergenic 25.0%
! AAGTTCAAAATTGCAAAAAC+GGG + chr3.2:61292481-61292500 None:intergenic 25.0%
! ACACATGAAAACATCAATTA+TGG + chr3.2:61291327-61291346 None:intergenic 25.0%
! AGATTTAATCACACAAACAT+TGG - chr3.2:61290719-61290738 MS.gene62289:intron 25.0%
! AGTGAAAATGACTTATCAAT+AGG - chr3.2:61292338-61292357 MS.gene62289:intron 25.0%
! ATTTAAGAAACAAACCAGAA+TGG - chr3.2:61290526-61290545 MS.gene62289:intron 25.0%
! CATTGAATACTTAATGTAGT+TGG + chr3.2:61289515-61289534 None:intergenic 25.0%
! CGAATAGTTTACAAAATTTG+CGG - chr3.2:61292269-61292288 MS.gene62289:intron 25.0%
! GAAATTCAAATCACAAACAA+TGG - chr3.2:61289290-61289309 MS.gene62289:intron 25.0%
! GGGTTTATATAAGAAATTCA+AGG + chr3.2:61288821-61288840 None:intergenic 25.0%
! GTGAAAATGACTTATCAATA+GGG - chr3.2:61292339-61292358 MS.gene62289:intron 25.0%
! TATACTACTTGAGAGAATTA+AGG - chr3.2:61289388-61289407 MS.gene62289:intron 25.0%
! TGATGTTGCAAAACATTAAA+CGG - chr3.2:61291666-61291685 MS.gene62289:intron 25.0%
! TTATAGATTTCCTCATCATT+TGG - chr3.2:61290807-61290826 MS.gene62289:intron 25.0%
! TTCATTTAGTAATGCTTGTT+CGG + chr3.2:61291424-61291443 None:intergenic 25.0%
!! AAAAATTCTTACCCTTTTCA+TGG - chr3.2:61288467-61288486 MS.gene62289:intron 25.0%
!! ATTAGTATTTGAGACATTGA+TGG - chr3.2:61288550-61288569 MS.gene62289:intron 25.0%
!! TCTAAAATTTAGCTAGTAAC+TGG + chr3.2:61289968-61289987 None:intergenic 25.0%
!! TTTTCTTCATATATTCGAAG+AGG - chr3.2:61292441-61292460 MS.gene62289:CDS 25.0%
!!! ATAATTTGTTTTGTTGGTTC+AGG - chr3.2:61290628-61290647 MS.gene62289:intron 25.0%
!!! ATATCTAGTTTTCTTGTACA+TGG - chr3.2:61290845-61290864 MS.gene62289:intron 25.0%
!!! GCTCTAAATTCAAAAGTTTT+TGG - chr3.2:61292389-61292408 MS.gene62289:intron 25.0%
!!! TGAGTTTTTTGAAAAATGCA+CGG - chr3.2:61290869-61290888 MS.gene62289:intron 25.0%
AAAAAGGAGTCCTAGTAATT+CGG + chr3.2:61289909-61289928 None:intergenic 30.0%
AAAAATTGGGGACAATTTCT+TGG - chr3.2:61290184-61290203 MS.gene62289:CDS 30.0%
AATACTCAAATGTTTCCGTA+AGG - chr3.2:61292507-61292526 MS.gene62289:CDS 30.0%
AATATGATAGATGTTGAGTG+AGG + chr3.2:61292164-61292183 None:intergenic 30.0%
AATGTTTAGGAGTAAAGATG+AGG - chr3.2:61289067-61289086 MS.gene62289:intron 30.0%
AATTCTCTCAAGTAGTATAC+AGG + chr3.2:61289387-61289406 None:intergenic 30.0%
ACTGGTCATGTATGATTTAT+TGG + chr3.2:61289950-61289969 None:intergenic 30.0%
AGAAATTGCCCAATTTATAG+GGG + chr3.2:61288841-61288860 None:intergenic 30.0%
AGAGGAAAGGAGAAAAAATT+GGG - chr3.2:61290171-61290190 MS.gene62289:CDS 30.0%
AGGATATCAGTATCATCATA+AGG + chr3.2:61289213-61289232 None:intergenic 30.0%
AGTTAGGAATTATTAGAGGA+AGG - chr3.2:61290097-61290116 MS.gene62289:CDS 30.0%
ATAAAATCAAATCCTACCCT+TGG + chr3.2:61289240-61289259 None:intergenic 30.0%
ATACATGAACAGTAACCAAA+TGG - chr3.2:61289783-61289802 MS.gene62289:intron 30.0%
ATACTCAAATGTTTCCGTAA+GGG - chr3.2:61292508-61292527 MS.gene62289:CDS 30.0%
ATGTGTGGAGCAAATATTAA+AGG + chr3.2:61290386-61290405 None:intergenic 30.0%
ATGTTGCAAAACATTAAACG+GGG - chr3.2:61291668-61291687 MS.gene62289:intron 30.0%
ATGTTTAGGAGTAAAGATGA+GGG - chr3.2:61289068-61289087 MS.gene62289:intron 30.0%
CATTGAATGCCTAATGTATT+TGG - chr3.2:61289476-61289495 MS.gene62289:CDS 30.0%
CTGAATAGACAATTCAACAA+AGG + chr3.2:61290437-61290456 None:intergenic 30.0%
CTTCAAGTAAGACTTCAAAA+AGG + chr3.2:61292122-61292141 None:intergenic 30.0%
CTTGTGTCATACTATTTGTA+AGG + chr3.2:61292551-61292570 None:intergenic 30.0%
CTTTGTTGAATTGTCTATTC+AGG - chr3.2:61290435-61290454 MS.gene62289:intron 30.0%
GATGTTGCAAAACATTAAAC+GGG - chr3.2:61291667-61291686 MS.gene62289:intron 30.0%
GGAGGTAGTATATAATACTA+AGG - chr3.2:61289571-61289590 MS.gene62289:intron 30.0%
GGATATCAGTATCATCATAA+GGG + chr3.2:61289212-61289231 None:intergenic 30.0%
GTTATGAATAATCTGTTGCA+TGG - chr3.2:61288600-61288619 MS.gene62289:intron 30.0%
TAAAATCAAATCCTACCCTT+GGG + chr3.2:61289239-61289258 None:intergenic 30.0%
TAATAATTCCTAACTACCCA+AGG + chr3.2:61290092-61290111 None:intergenic 30.0%
TAATTCGGAATTTGATCAAG+AGG + chr3.2:61289894-61289913 None:intergenic 30.0%
TACTGTTCATGTATTGAGTA+CGG + chr3.2:61289777-61289796 None:intergenic 30.0%
TAGTCTATGATCTTTAAGCA+TGG + chr3.2:61292315-61292334 None:intergenic 30.0%
TGATCAAATTCCGAATTACT+AGG - chr3.2:61289896-61289915 MS.gene62289:intron 30.0%
TGCTGAAACTTGAATTCTAA+CGG + chr3.2:61288261-61288280 None:intergenic 30.0%
TTCAAAAAGGTTAGTGAATC+AGG + chr3.2:61292109-61292128 None:intergenic 30.0%
TTGCTTATAAATATGACTGG+AGG - chr3.2:61289553-61289572 MS.gene62289:intron 30.0%
TTTAATCACACAAACATTGG+AGG - chr3.2:61290722-61290741 MS.gene62289:intron 30.0%
TTTACCTTATGAGCCAAAAT+TGG - chr3.2:61290500-61290519 MS.gene62289:intron 30.0%
TTTCGTTAGTCAGTAAGTAT+GGG - chr3.2:61291145-61291164 MS.gene62289:intron 30.0%
! AAAGTCATACATTTTCCTTG+AGG + chr3.2:61291467-61291486 None:intergenic 30.0%
! ATTTGAGACATTGATGGTAT+TGG - chr3.2:61288556-61288575 MS.gene62289:intron 30.0%
! ATTTGTAAGGAAAAAGTGTG+AGG + chr3.2:61292538-61292557 None:intergenic 30.0%
! GTTCCCGTAATAAATTTTGA+TGG - chr3.2:61290678-61290697 MS.gene62289:intron 30.0%
! TAGGTTGCTAGATTTACTTT+TGG - chr3.2:61290322-61290341 MS.gene62289:intron 30.0%
! TTACATCTTTTCCTGCATTA+TGG - chr3.2:61291574-61291593 MS.gene62289:intron 30.0%
!! ATAAAAGGGTGCTTAGATAT+AGG - chr3.2:61288971-61288990 MS.gene62289:intron 30.0%
!! ATGGTATTGGTAGAAAGAAT+AGG - chr3.2:61288569-61288588 MS.gene62289:intron 30.0%
!! CATGTGTTTTTGTCTATAGT+GGG - chr3.2:61291340-61291359 MS.gene62289:intron 30.0%
!! CTTTGGGACATTATAAGAAA+TGG - chr3.2:61292077-61292096 MS.gene62289:intron 30.0%
!! TAAAAGGGTGCTTAGATATA+GGG - chr3.2:61288972-61288991 MS.gene62289:intron 30.0%
!! TAGAAAAAGTTGATGACTTG+TGG + chr3.2:61290582-61290601 None:intergenic 30.0%
!! TCATGTGTTTTTGTCTATAG+TGG - chr3.2:61291339-61291358 MS.gene62289:intron 30.0%
!! TGGTATTGGTAGAAAGAATA+GGG - chr3.2:61288570-61288589 MS.gene62289:intron 30.0%
!!! AAGTTTTTGGTAATGTGCTT+TGG - chr3.2:61292402-61292421 MS.gene62289:intron 30.0%
!!! ATTGCAAATTTTTTTTCGCC+CGG - chr3.2:61288913-61288932 MS.gene62289:intron 30.0%
!!! CTTTTTGAAGTCTTACTTGA+AGG - chr3.2:61292120-61292139 MS.gene62289:intron 30.0%
!!! GCAAATTTTTTCTTCTCACA+GGG - chr3.2:61291980-61291999 MS.gene62289:intron 30.0%
!!! TGCAAATTTTTTCTTCTCAC+AGG - chr3.2:61291979-61291998 MS.gene62289:intron 30.0%
!!! TTTCCCTTCTATTTTTGTCT+CGG - chr3.2:61291487-61291506 MS.gene62289:intron 30.0%
AAAATCAAATCCTACCCTTG+GGG + chr3.2:61289238-61289257 None:intergenic 35.0%
AACACCATCTCACTCATTTA+GGG - chr3.2:61291237-61291256 MS.gene62289:intron 35.0%
ACACTACAAGAGAAGTGATA+TGG + chr3.2:61291607-61291626 None:intergenic 35.0%
ACGATATCTGACAGATTCAA+GGG + chr3.2:61291010-61291029 None:intergenic 35.0%
ACTAACGAAAGACATATCTG+AGG + chr3.2:61291135-61291154 None:intergenic 35.0%
AGAACTAACTAGAGAAAGCT+TGG + chr3.2:61290125-61290144 None:intergenic 35.0%
AGAAGACATTGATACTCGAA+GGG + chr3.2:61288375-61288394 None:intergenic 35.0%
AGAATTAAGGTTTACAGCGT+TGG - chr3.2:61289401-61289420 MS.gene62289:intron 35.0%
ATACCATTTGGAGATTGCTT+TGG - chr3.2:61292060-61292079 MS.gene62289:intron 35.0%
ATAGCCGAGACAAAAATAGA+AGG + chr3.2:61291494-61291513 None:intergenic 35.0%
ATCAAGAGGTAAGTAAAGTC+AGG + chr3.2:61289880-61289899 None:intergenic 35.0%
ATCCAAGTTCAAATTCTGAC+CGG - chr3.2:61289842-61289861 MS.gene62289:intron 35.0%
ATCTCCAAATGGTATAGCTT+TGG + chr3.2:61292055-61292074 None:intergenic 35.0%
ATGTATTGAGTACGGTTCAT+AGG + chr3.2:61289769-61289788 None:intergenic 35.0%
ATGTCTTTCCCATTGACAAA+AGG + chr3.2:61292007-61292026 None:intergenic 35.0%
CTTTCGTTAGTCAGTAAGTA+TGG - chr3.2:61291144-61291163 MS.gene62289:intron 35.0%
GAGAGGAAAGGAGAAAAAAT+TGG - chr3.2:61290170-61290189 MS.gene62289:CDS 35.0%
GAGGAAAGGAGAAAAAATTG+GGG - chr3.2:61290172-61290191 MS.gene62289:CDS 35.0%
GATCGTTTGTTTACGCAATT+CGG - chr3.2:61289318-61289337 MS.gene62289:intron 35.0%
GGGTAGTTAGGAATTATTAG+AGG - chr3.2:61290093-61290112 MS.gene62289:CDS 35.0%
GTCTCTCGTTTGTAATTTCA+TGG + chr3.2:61291171-61291190 None:intergenic 35.0%
TAACACCATCTCACTCATTT+AGG - chr3.2:61291236-61291255 MS.gene62289:intron 35.0%
TACCATTTGGAGATTGCTTT+GGG - chr3.2:61292061-61292080 MS.gene62289:intron 35.0%
TACTCAAATGTTTCCGTAAG+GGG - chr3.2:61292509-61292528 MS.gene62289:CDS 35.0%
TAGCCGAGACAAAAATAGAA+GGG + chr3.2:61291493-61291512 None:intergenic 35.0%
TCAATAGGGAGACTTGAATT+TGG - chr3.2:61292353-61292372 MS.gene62289:intron 35.0%
TCTTTGTATATGTCTTCCCT+TGG - chr3.2:61291099-61291118 MS.gene62289:intron 35.0%
TGAAACTTGAATTCTAACGG+TGG + chr3.2:61288258-61288277 None:intergenic 35.0%
TGCTTATAAATGTGACCGAA+GGG + chr3.2:61289435-61289454 None:intergenic 35.0%
TTACAGTCTCCAATCTTGTT+AGG + chr3.2:61288449-61288468 None:intergenic 35.0%
TTGCTTATAAATGTGACCGA+AGG + chr3.2:61289436-61289455 None:intergenic 35.0%
! CAAAGTATCTCCAAATGATG+AGG + chr3.2:61290820-61290839 None:intergenic 35.0%
! TCTAAGCACCCTTTTATTAG+AGG + chr3.2:61288968-61288987 None:intergenic 35.0%
! TTACTAGGACTCCTTTTTCT+TGG - chr3.2:61289911-61289930 MS.gene62289:intron 35.0%
!! AAATTGCAAAAACGGGCTAT+AGG + chr3.2:61292474-61292493 None:intergenic 35.0%
!! AATTGCAAAAACGGGCTATA+GGG + chr3.2:61292473-61292492 None:intergenic 35.0%
!! TACTTTTGGTTGATTGCTGT+TGG - chr3.2:61290336-61290355 MS.gene62289:CDS 35.0%
!! TGTGGATTTGCTATACATCT+AGG - chr3.2:61290303-61290322 MS.gene62289:intron 35.0%
!! TTTTCTTGTTTCGATCCTTC+TGG - chr3.2:61291905-61291924 MS.gene62289:intron 35.0%
!!! TCAACCAATTTTGGCTCATA+AGG + chr3.2:61290507-61290526 None:intergenic 35.0%
!!! TTGCAAATTTTTTTTCGCCC+GGG - chr3.2:61288914-61288933 MS.gene62289:intron 35.0%
AAAGTTGACACTGAGTAGCA+CGG + chr3.2:61290965-61290984 None:intergenic 40.0%
AAGACTCCGTTTAACCAGTT+CGG + chr3.2:61290239-61290258 None:intergenic 40.0%
AAGAGCAAAGATCCCAATGA+CGG - chr3.2:61291396-61291415 MS.gene62289:intron 40.0%
AATATCCCTGAAACGTACTG+CGG - chr3.2:61289607-61289626 MS.gene62289:intron 40.0%
AATGCTGAAACCGTTGTTGA+AGG + chr3.2:61288348-61288367 None:intergenic 40.0%
ACAGGAGCTCATTAACCATT+TGG + chr3.2:61289801-61289820 None:intergenic 40.0%
AGAGAGGTAAACAACACACT+TGG + chr3.2:61289344-61289363 None:intergenic 40.0%
AGGACCAAAGCTATACCATT+TGG - chr3.2:61292048-61292067 MS.gene62289:intron 40.0%
AGTCAGGTCAAGAAATGTTC+CGG + chr3.2:61289864-61289883 None:intergenic 40.0%
ATGATAGATGTTGAGTGAGG+AGG + chr3.2:61292161-61292180 None:intergenic 40.0%
ATGTCTTCCCTTGGTCAATT+TGG - chr3.2:61291108-61291127 MS.gene62289:intron 40.0%
ATTACGGGAACTTTACCTTC+AGG + chr3.2:61290669-61290688 None:intergenic 40.0%
CAATCGGTATTTGCACAGAA+GGG + chr3.2:61292574-61292593 None:intergenic 40.0%
CAATGGGAAAGACATATCTG+CGG - chr3.2:61292012-61292031 MS.gene62289:intron 40.0%
CAGAAGACATTGATACTCGA+AGG + chr3.2:61288376-61288395 None:intergenic 40.0%
CCTGTCAAGGTCAATTGAAT+CGG - chr3.2:61289816-61289835 MS.gene62289:intron 40.0%
CTAACCCTCTTCCAAGAAAA+AGG + chr3.2:61289925-61289944 None:intergenic 40.0%
CTAGTTGAAACAGCGTAGTT+TGG + chr3.2:61288323-61288342 None:intergenic 40.0%
CTTACCACTCCTAACAAGAT+TGG - chr3.2:61288437-61288456 MS.gene62289:intron 40.0%
CTTGAGTGATTCATCTGAGT+GGG - chr3.2:61290143-61290162 MS.gene62289:CDS 40.0%
GAAGACATTGATACTCGAAG+GGG + chr3.2:61288374-61288393 None:intergenic 40.0%
GACGATATCTGACAGATTCA+AGG + chr3.2:61291011-61291030 None:intergenic 40.0%
GAGTAGCACGGTAACATAAA+GGG + chr3.2:61290953-61290972 None:intergenic 40.0%
GCAAAACATTAAACGGGGAT+CGG - chr3.2:61291673-61291692 MS.gene62289:intron 40.0%
GCTTTAACAGCAACTTCCAA+TGG + chr3.2:61288413-61288432 None:intergenic 40.0%
GGTTCATAGGCACAAAAGAA+GGG + chr3.2:61289756-61289775 None:intergenic 40.0%
GTAGAAAGAATAGGGTAGTG+TGG - chr3.2:61288578-61288597 MS.gene62289:intron 40.0%
TAGTCCCTAAATGAGTGAGA+TGG + chr3.2:61291244-61291263 None:intergenic 40.0%
TCAACTAGCTCCTTCAACAA+CGG - chr3.2:61288335-61288354 MS.gene62289:intron 40.0%
TCTTGAGTGATTCATCTGAG+TGG - chr3.2:61290142-61290161 MS.gene62289:CDS 40.0%
TGAGTAGCACGGTAACATAA+AGG + chr3.2:61290954-61290973 None:intergenic 40.0%
TGTGGTCTGTAAGTGAAACA+TGG + chr3.2:61290564-61290583 None:intergenic 40.0%
TTCCGGTCAGAATTTGAACT+TGG + chr3.2:61289847-61289866 None:intergenic 40.0%
TTCCTTGAAATCAGTCCTGA+AGG - chr3.2:61290651-61290670 MS.gene62289:intron 40.0%
TTCCTTGAGGTAATCGTTGA+AGG + chr3.2:61291454-61291473 None:intergenic 40.0%
TTGAAACAGCGTAGTTTGGA+CGG + chr3.2:61288319-61288338 None:intergenic 40.0%
TTTGCAACATCACACGTAGA+TGG + chr3.2:61291658-61291677 None:intergenic 40.0%
! CCAGGATTTTTATAAAGCCC+GGG + chr3.2:61288934-61288953 None:intergenic 40.0%
! CTTTTCCTGCATTATGGTCA+TGG - chr3.2:61291580-61291599 MS.gene62289:intron 40.0%
! CTTTTTCTTGGAAGAGGGTT+AGG - chr3.2:61289923-61289942 MS.gene62289:intron 40.0%
! GACTCCTTTTTCTTGGAAGA+GGG - chr3.2:61289918-61289937 MS.gene62289:intron 40.0%
! GCCAGGATTTTTATAAAGCC+CGG + chr3.2:61288935-61288954 None:intergenic 40.0%
! GTGCAAATACCGATTGCTAA+AGG - chr3.2:61292578-61292597 MS.gene62289:CDS 40.0%
! TACCTTCAGGACTGATTTCA+AGG + chr3.2:61290656-61290675 None:intergenic 40.0%
! TGAAGCACTCCTTTAGCAAT+CGG + chr3.2:61292590-61292609 None:intergenic 40.0%
! TTTGGTTGATTGCTGTTGGT+TGG - chr3.2:61290340-61290359 MS.gene62289:CDS 40.0%
!! ATAGCTTTGGTCCTAGTGAT+AGG + chr3.2:61292042-61292061 None:intergenic 40.0%
!! GCATGGACACTTTTGATTGA+AGG - chr3.2:61288617-61288636 MS.gene62289:intron 40.0%
!! TGCAAAGTGTTGAGAGCTAT+TGG - chr3.2:61290052-61290071 MS.gene62289:intron 40.0%
AAAAAATTTGGACCGGAGCC+CGG + chr3.2:61288778-61288797 None:intergenic 45.0%
AACACGACACATGTCGGATA+CGG + chr3.2:61288649-61288668 None:intergenic 45.0%
ACACGTAGATGGAGTACAAG+AGG + chr3.2:61291647-61291666 None:intergenic 45.0%
ACGGTAACGAAGGTGGTTAA+CGG + chr3.2:61288300-61288319 None:intergenic 45.0%
AGCAACACCCTTTGGCTAAA+AGG + chr3.2:61290462-61290481 None:intergenic 45.0%
ATACTGATATCCTCTCCCCA+AGG - chr3.2:61289220-61289239 MS.gene62289:intron 45.0%
ATAGGCACAAAAGAAGGGCA+AGG + chr3.2:61289751-61289770 None:intergenic 45.0%
ATATCCCTGAAACGTACTGC+GGG - chr3.2:61289608-61289627 MS.gene62289:intron 45.0%
ATGGTCCATGACCATAATGC+AGG + chr3.2:61291588-61291607 None:intergenic 45.0%
CAAATGCAAGGAAGGGTGAA+AGG - chr3.2:61289696-61289715 MS.gene62289:intron 45.0%
CAACTACTCTGTAGTCAGAG+AGG + chr3.2:61289360-61289379 None:intergenic 45.0%
CCAGATTGACCTATGTCTAG+GGG + chr3.2:61290215-61290234 None:intergenic 45.0%
CCCAGATTGACCTATGTCTA+GGG + chr3.2:61290216-61290235 None:intergenic 45.0%
CCCTAGACATAGGTCAATCT+GGG - chr3.2:61290213-61290232 MS.gene62289:intron 45.0%
CCGATTCAATTGACCTTGAC+AGG + chr3.2:61289819-61289838 None:intergenic 45.0%
CGCCACTGCCTCTAATAAAA+GGG - chr3.2:61288957-61288976 MS.gene62289:intron 45.0%
CGGTTCATAGGCACAAAAGA+AGG + chr3.2:61289757-61289776 None:intergenic 45.0%
CTCCTTCAACGATTACCTCA+AGG - chr3.2:61291449-61291468 MS.gene62289:intron 45.0%
CTGAGGACCAAATTGACCAA+GGG + chr3.2:61291118-61291137 None:intergenic 45.0%
CTTTCACCCTTCCTTGCATT+TGG + chr3.2:61289698-61289717 None:intergenic 45.0%
GCAACACCCTTTGGCTAAAA+GGG + chr3.2:61290461-61290480 None:intergenic 45.0%
GCAATCGGTATTTGCACAGA+AGG + chr3.2:61292575-61292594 None:intergenic 45.0%
GCAGGAAAAGATGTAATGCC+AGG + chr3.2:61291570-61291589 None:intergenic 45.0%
GGACAAGAAGATCACCATTC+TGG + chr3.2:61290543-61290562 None:intergenic 45.0%
GTCCCAAAGCAATCTCCAAA+TGG + chr3.2:61292066-61292085 None:intergenic 45.0%
GTCTCCAATCTTGTTAGGAG+TGG + chr3.2:61288444-61288463 None:intergenic 45.0%
TACTGATATCCTCTCCCCAA+GGG - chr3.2:61289221-61289240 MS.gene62289:intron 45.0%
TAGGCACAAAAGAAGGGCAA+GGG + chr3.2:61289750-61289769 None:intergenic 45.0%
TCTGAGGACCAAATTGACCA+AGG + chr3.2:61291119-61291138 None:intergenic 45.0%
TGCTTAGATATAGGGACGGA+GGG - chr3.2:61288980-61288999 MS.gene62289:intron 45.0%
TGGTTAATGAGCTCCTGTCA+AGG - chr3.2:61289803-61289822 MS.gene62289:intron 45.0%
TGTCTGTTTCAGTGTCGTGT+CGG - chr3.2:61289015-61289034 MS.gene62289:intron 45.0%
TTTGGGCCAAATGCAAGGAA+GGG - chr3.2:61289689-61289708 MS.gene62289:intron 45.0%
! ACATACGCTGTAGCCTTTTC+AGG + chr3.2:61290780-61290799 None:intergenic 45.0%
! AGAGCTATTGGTTGAGGTTC+TGG - chr3.2:61290064-61290083 MS.gene62289:intron 45.0%
! AGCTATTGGTTGAGGTTCTG+GGG - chr3.2:61290066-61290085 MS.gene62289:intron 45.0%
! AGGGTGCTTAGATATAGGGA+CGG - chr3.2:61288976-61288995 MS.gene62289:intron 45.0%
! ATTCAGGCCCTTTTAGCCAA+AGG - chr3.2:61290451-61290470 MS.gene62289:intron 45.0%
! ATTGGTGACACCACCTGAAA+AGG - chr3.2:61290764-61290783 MS.gene62289:intron 45.0%
! CACAGGGTCCTTTTGTCAAT+GGG - chr3.2:61291996-61292015 MS.gene62289:intron 45.0%
! CACCCTTTTATTAGAGGCAG+TGG + chr3.2:61288962-61288981 None:intergenic 45.0%
! CCCGGGCTTTATAAAAATCC+TGG - chr3.2:61288931-61288950 MS.gene62289:intron 45.0%
! CCTTTTATTAGAGGCAGTGG+CGG + chr3.2:61288959-61288978 None:intergenic 45.0%
! GAGCTATTGGTTGAGGTTCT+GGG - chr3.2:61290065-61290084 MS.gene62289:intron 45.0%
! GGACTCCTTTTTCTTGGAAG+AGG - chr3.2:61289917-61289936 MS.gene62289:intron 45.0%
! GTGTTGAGAGCTATTGGTTG+AGG - chr3.2:61290058-61290077 MS.gene62289:intron 45.0%
! TCACAGGGTCCTTTTGTCAA+TGG - chr3.2:61291995-61292014 MS.gene62289:intron 45.0%
! TTCAGGCCCTTTTAGCCAAA+GGG - chr3.2:61290452-61290471 MS.gene62289:intron 45.0%
!! GCTGTTGGTTGGACTGTTTT+GGG - chr3.2:61290351-61290370 MS.gene62289:CDS 45.0%
!! TGCTGTTGGTTGGACTGTTT+TGG - chr3.2:61290350-61290369 MS.gene62289:CDS 45.0%
!!! TTTTCAGGTGGTGTCACCAA+TGG + chr3.2:61290765-61290784 None:intergenic 45.0%
AAAAATTTGGACCGGAGCCC+GGG + chr3.2:61288777-61288796 None:intergenic 50.0%
AAGTGTGAGGAAGCCCCTTA+CGG + chr3.2:61292525-61292544 None:intergenic 50.0%
ACACGACACATGTCGGATAC+GGG + chr3.2:61288648-61288667 None:intergenic 50.0%
ACTTCCAATGGCTCAGAAGG+AGG + chr3.2:61288401-61288420 None:intergenic 50.0%
AGGTCTCTCAATCTCTGACC+TGG - chr3.2:61291549-61291568 MS.gene62289:intron 50.0%
AGTTTGGACGGTAACGAAGG+TGG + chr3.2:61288307-61288326 None:intergenic 50.0%
CACCCTTTGCCTCTAATCAG+GGG - chr3.2:61288719-61288738 MS.gene62289:intron 50.0%
CCCCTAGACATAGGTCAATC+TGG - chr3.2:61290212-61290231 MS.gene62289:intron 50.0%
CCGCCACTGCCTCTAATAAA+AGG - chr3.2:61288956-61288975 MS.gene62289:intron 50.0%
CCTTGAATTACTCCCTCCGT+CGG - chr3.2:61288696-61288715 MS.gene62289:intron 50.0%
CGTAGTTTGGACGGTAACGA+AGG + chr3.2:61288310-61288329 None:intergenic 50.0%
CTCACCAAGACAGTGATGTG+TGG + chr3.2:61290401-61290420 None:intergenic 50.0%
CTCTTGTAGTGTGCATCGCT+TGG - chr3.2:61291615-61291634 MS.gene62289:intron 50.0%
CTGTCGAACACGACACATGT+CGG + chr3.2:61288655-61288674 None:intergenic 50.0%
GCAACTTCCAATGGCTCAGA+AGG + chr3.2:61288404-61288423 None:intergenic 50.0%
GCACCCTTTGCCTCTAATCA+GGG - chr3.2:61288718-61288737 MS.gene62289:intron 50.0%
GCCCAGATTGACCTATGTCT+AGG + chr3.2:61290217-61290236 None:intergenic 50.0%
GCTTGTTCGGTTCCGTCATT+GGG + chr3.2:61291411-61291430 None:intergenic 50.0%
GTAACGAAGGTGGTTAACGG+TGG + chr3.2:61288297-61288316 None:intergenic 50.0%
GTGCTTAGATATAGGGACGG+AGG - chr3.2:61288979-61288998 MS.gene62289:intron 50.0%
GTTTGGGCCAAATGCAAGGA+AGG - chr3.2:61289688-61289707 MS.gene62289:intron 50.0%
TATCCCTGAAACGTACTGCG+GGG - chr3.2:61289609-61289628 MS.gene62289:intron 50.0%
TCTAATCAGGGGCGGTTCTA+AGG - chr3.2:61288730-61288749 MS.gene62289:intron 50.0%
TCTGGGCCGAACTGGTTAAA+CGG - chr3.2:61290230-61290249 MS.gene62289:intron 50.0%
TGCTCCACACATCACTGTCT+TGG - chr3.2:61290394-61290413 MS.gene62289:CDS 50.0%
TGCTCCCTGCAACAAACAGT+CGG - chr3.2:61289654-61289673 MS.gene62289:intron 50.0%
TGCTTCATAACAACCGCAGC+CGG - chr3.2:61292603-61292622 MS.gene62289:CDS 50.0%
TGCTTGTTCGGTTCCGTCAT+TGG + chr3.2:61291412-61291431 None:intergenic 50.0%
TGTTCCTCCTTCTGAGCCAT+TGG - chr3.2:61288394-61288413 MS.gene62289:intron 50.0%
TTAGAACCGCCCCTGATTAG+AGG + chr3.2:61288731-61288750 None:intergenic 50.0%
TTGGTCACTCCCCTAGACAT+AGG - chr3.2:61290203-61290222 MS.gene62289:CDS 50.0%
TTTGGCCCAAACGTGCGTTA+AGG + chr3.2:61289680-61289699 None:intergenic 50.0%
TTTGTTGCAGGGAGCAGCTA+GGG + chr3.2:61289650-61289669 None:intergenic 50.0%
! AAGGCCGACTGTTTGTTGCA+GGG + chr3.2:61289661-61289680 None:intergenic 50.0%
! GAAGTATCCTAGCCCACCAT+TGG - chr3.2:61290746-61290765 MS.gene62289:intron 50.0%
! GCGTTGGCATATACTCCCTT+CGG - chr3.2:61289417-61289436 MS.gene62289:CDS 50.0%
! TAAGGCCGACTGTTTGTTGC+AGG + chr3.2:61289662-61289681 None:intergenic 50.0%
!! TACGCTGTAGCCTTTTCAGG+TGG + chr3.2:61290777-61290796 None:intergenic 50.0%
!! TCATCTGAGTGGGTTGAGAG+AGG - chr3.2:61290153-61290172 MS.gene62289:CDS 50.0%
!! TGAGTGGGTTGAGAGAGGAA+AGG - chr3.2:61290158-61290177 MS.gene62289:CDS 50.0%
ACGAAGGTGGTTAACGGTGG+CGG + chr3.2:61288294-61288313 None:intergenic 55.0%
AGTCGGCCTTAACGCACGTT+TGG - chr3.2:61289671-61289690 MS.gene62289:intron 55.0%
ATCCCTGAAACGTACTGCGG+GGG - chr3.2:61289610-61289629 MS.gene62289:intron 55.0%
CAAATCCTACCCTTGGGGAG+AGG + chr3.2:61289233-61289252 None:intergenic 55.0%
CCAGTGTCAGCAACACCCTT+TGG + chr3.2:61290470-61290489 None:intergenic 55.0%
CCGACGGAGGGAGTAATTCA+AGG + chr3.2:61288699-61288718 None:intergenic 55.0%
CCTTTGCCTCTAATCAGGGG+CGG - chr3.2:61288722-61288741 MS.gene62289:intron 55.0%
CGCCCCTGATTAGAGGCAAA+GGG + chr3.2:61288724-61288743 None:intergenic 55.0%
GATATCCTCTCCCCAAGGGT+AGG - chr3.2:61289225-61289244 MS.gene62289:intron 55.0%
GCACGTTTGGGCCAAATGCA+AGG - chr3.2:61289684-61289703 MS.gene62289:intron 55.0%
GGCACCCTTTGCCTCTAATC+AGG - chr3.2:61288717-61288736 MS.gene62289:intron 55.0%
GTCGGCCTTAACGCACGTTT+GGG - chr3.2:61289672-61289691 MS.gene62289:intron 55.0%
TAGGTCAATCTGGGCCGAAC+TGG - chr3.2:61290222-61290241 MS.gene62289:intron 55.0%
TCTGCGGCTGACCTATCACT+AGG - chr3.2:61292028-61292047 MS.gene62289:intron 55.0%
! GTTTGTTGCAGGGAGCAGCT+AGG + chr3.2:61289651-61289670 None:intergenic 55.0%
!! AAGGGTGTTGCTGACACTGG+AGG - chr3.2:61290470-61290489 MS.gene62289:intron 55.0%
!! CAGGTGGTGTCACCAATGGT+GGG + chr3.2:61290761-61290780 None:intergenic 55.0%
!! CCAAAGGGTGTTGCTGACAC+TGG - chr3.2:61290467-61290486 MS.gene62289:intron 55.0%
!! TCAGGTGGTGTCACCAATGG+TGG + chr3.2:61290762-61290781 None:intergenic 55.0%
!! TTAGAGGCAAAGGGTGCCGA+CGG + chr3.2:61288715-61288734 None:intergenic 55.0%
!! TTCTGGGGCCTTGGGTAGTT+AGG - chr3.2:61290081-61290100 MS.gene62289:intron 55.0%
AGCCCCCGCAGTACGTTTCA+GGG + chr3.2:61289615-61289634 None:intergenic 60.0%
CCGCCCCTGATTAGAGGCAA+AGG + chr3.2:61288725-61288744 None:intergenic 60.0%
TAGCCCCCGCAGTACGTTTC+AGG + chr3.2:61289616-61289635 None:intergenic 60.0%
!! GGTGTCACCAATGGTGGGCT+AGG + chr3.2:61290756-61290775 None:intergenic 60.0%
!! GGTTGAGGTTCTGGGGCCTT+GGG - chr3.2:61290073-61290092 MS.gene62289:intron 60.0%
!! TGGTTGAGGTTCTGGGGCCT+TGG - chr3.2:61290072-61290091 MS.gene62289:intron 60.0%
AGGGAGCAGCTAGGGTGCAG+GGG + chr3.2:61289642-61289661 None:intergenic 65.0%
CAGGGAGCAGCTAGGGTGCA+GGG + chr3.2:61289643-61289662 None:intergenic 65.0%
! GGGACGGAGGGAGTATGTCG+AGG - chr3.2:61288992-61289011 MS.gene62289:intron 65.0%
! TTAGAGGCAGTGGCGGAGCC+AGG + chr3.2:61288952-61288971 None:intergenic 65.0%
!! AGGCAAAGGGTGCCGACGGA+GGG + chr3.2:61288711-61288730 None:intergenic 65.0%
!! TCAGGGGCGGTTCTAAGGCC+CGG - chr3.2:61288735-61288754 MS.gene62289:intron 65.0%
GCAGGGAGCAGCTAGGGTGC+AGG + chr3.2:61289644-61289663 None:intergenic 70.0%
!! GAGGCAAAGGGTGCCGACGG+AGG + chr3.2:61288712-61288731 None:intergenic 70.0%
!! GTTCTAAGGCCCGGCGAGCC+CGG - chr3.2:61288744-61288763 MS.gene62289:CDS 70.0%
!! TTCTAAGGCCCGGCGAGCCC+GGG - chr3.2:61288745-61288764 MS.gene62289:CDS 70.0%
! CCGGAGCCCGGGCGAGTGCC+CGG + chr3.2:61288766-61288785 None:intergenic 85.0%
! CCGGGCACTCGCCCGGGCTC+CGG - chr3.2:61288763-61288782 MS.gene62289:CDS 85.0%
! CGGAGCCCGGGCGAGTGCCC+GGG + chr3.2:61288765-61288784 None:intergenic 85.0%
! GCGAGCCCGGGCACTCGCCC+GGG - chr3.2:61288757-61288776 MS.gene62289:CDS 85.0%
! GGCGAGCCCGGGCACTCGCC+CGG - chr3.2:61288756-61288775 MS.gene62289:CDS 85.0%
! GGCGAGTGCCCGGGCTCGCC+GGG + chr3.2:61288756-61288775 None:intergenic 85.0%
! GGGCGAGTGCCCGGGCTCGC+CGG + chr3.2:61288757-61288776 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 61288251 61292628 61288251 ID=MS.gene62289
chr3.2 mRNA 61288251 61292628 61288251 ID=MS.gene62289.t1;Parent=MS.gene62289
chr3.2 exon 61292415 61292628 61292415 ID=MS.gene62289.t1.exon1;Parent=MS.gene62289.t1
chr3.2 CDS 61292415 61292628 61292415 ID=cds.MS.gene62289.t1;Parent=MS.gene62289.t1
chr3.2 exon 61290332 61290422 61290332 ID=MS.gene62289.t1.exon2;Parent=MS.gene62289.t1
chr3.2 CDS 61290332 61290422 61290332 ID=cds.MS.gene62289.t1;Parent=MS.gene62289.t1
chr3.2 exon 61290086 61290229 61290086 ID=MS.gene62289.t1.exon3;Parent=MS.gene62289.t1
chr3.2 CDS 61290086 61290229 61290086 ID=cds.MS.gene62289.t1;Parent=MS.gene62289.t1
chr3.2 exon 61289403 61289520 61289403 ID=MS.gene62289.t1.exon4;Parent=MS.gene62289.t1
chr3.2 CDS 61289403 61289520 61289403 ID=cds.MS.gene62289.t1;Parent=MS.gene62289.t1
chr3.2 exon 61288738 61288878 61288738 ID=MS.gene62289.t1.exon5;Parent=MS.gene62289.t1
chr3.2 CDS 61288738 61288878 61288738 ID=cds.MS.gene62289.t1;Parent=MS.gene62289.t1
chr3.2 exon 61288251 61288319 61288251 ID=MS.gene62289.t1.exon6;Parent=MS.gene62289.t1
chr3.2 CDS 61288251 61288319 61288251 ID=cds.MS.gene62289.t1;Parent=MS.gene62289.t1
Gene Sequence

>MS.gene62289

ATGTCCACCGTTAGAATTCAAGTTTCAGCATGCGCTCTTTCCGCCACCGTTAACCACCTTCGTTACCGTCCAAACTACGCTGTTTCAACTAGCTCCTTCAACAACGGTTTCAGCATTAAACCCCTTCGAGTATCAATGTCTTCTGTTCCTCCTTCTGAGCCATTGGAAGTTGCTGTTAAAGCTTCTCTTACCACTCCTAACAAGATTGGAGACTGTAAAAATTCTTACCCTTTTCATGGTTTTAGTTATTTTCAGTGTTTGGCTTGTTTTTTGTATTGTTTGATAGAAATTGAAATGAAATTAGTATTTGAGACATTGATGGTATTGGTAGAAAGAATAGGGTAGTGTGGTTATGAATAATCTGTTGCATGGACACTTTTGATTGAAGGCGTGTCCCGTATCCGACATGTGTCGTGTTCGACAGACACTTGTGAATGTGTGATTACCTTGAATTACTCCCTCCGTCGGCACCCTTTGCCTCTAATCAGGGGCGGTTCTAAGGCCCGGCGAGCCCGGGCACTCGCCCGGGCTCCGGTCCAAATTTTTTGCAATTTCTTATGTAAATCCCCTTGAATTTCTTATATAAACCCCTATAAATTGGGCAATTTCTTTAAATTTTTTATTATTTGCTTGCAATTTCTTATGTAAACCCCTATAAATGTATTGCAAATTTTTTTTCGCCCGGGCTTTATAAAAATCCTGGCTCCGCCACTGCCTCTAATAAAAGGGTGCTTAGATATAGGGACGGAGGGAGTATGTCGAGGTGTCTGTTTCAGTGTCGTGTCGGTGTCTGTGTTGTGCTTCATAAGTTTTGAAAATGTTTAGGAGTAAAGATGAGGGAGATAAATCATGATGTATCTAGACTTATGTTGTGTCTGCATGCATTCTCAATATCGTTTTTCTTTGAAATTTGAATTTTTCTTTAAGAAAATGTTTCTTTGAAATTTTTATACATACACCCTTATGATGATACTGATATCCTCTCCCCAAGGGTAGGATTTGATTTTATTAGAATAATAACTAGTAAGAAAAGATTAAAGAAATTCAAATCACAAACAATGGAACAAGATCGTTTGTTTACGCAATTCGGCCAAGTGTGTTGTTTACCTCTCTGACTACAGAGTAGTTGTAGTCCTGTATACTACTTGAGAGAATTAAGGTTTACAGCGTTGGCATATACTCCCTTCGGTCACATTTATAAGCAAAAAAAAACTATTTTTAGGTTCATTGAATGCCTAATGTATTTGGTCTATTATATATACCAACTACATTAAGTATTCAATGAATTTAAAAAGTAATTTTTTGCTTATAAATATGACTGGAGGTAGTATATAATACTAAGGTCTAGATTACAACAATATCCCTGAAACGTACTGCGGGGGCTATCTCCCCTGCACCCTAGCTGCTCCCTGCAACAAACAGTCGGCCTTAACGCACGTTTGGGCCAAATGCAAGGAAGGGTGAAAGGAGCTTTGCAACGATGCGCTAGCTCAGCTCCCTTGCCCTTCTTTTGTGCCTATGAACCGTACTCAATACATGAACAGTAACCAAATGGTTAATGAGCTCCTGTCAAGGTCAATTGAATCGGAGTATCCAAGTTCAAATTCTGACCGGAACATTTCTTGACCTGACTTTACTTACCTCTTGATCAAATTCCGAATTACTAGGACTCCTTTTTCTTGGAAGAGGGTTAGGACCAATAAATCATACATGACCAGTTACTAGCTAAATTTTAGATTATTAGCTCAAATGTCTGTGTATGTGTTGAAGATACAAGTAAAATTGTGTAATTTTTCATGTCTGCAAAGTGTTGAGAGCTATTGGTTGAGGTTCTGGGGCCTTGGGTAGTTAGGAATTATTAGAGGAAGGATCCAAGCTTTCTCTAGTTAGTTCTTGAGTGATTCATCTGAGTGGGTTGAGAGAGGAAAGGAGAAAAAATTGGGGACAATTTCTTGGTCACTCCCCTAGACATAGGTCAATCTGGGCCGAACTGGTTAAACGGAGTCTTTGTGTGTTTGTTCATCTTCCTTTATCTTTGTTCTTTGATTTAATTGTGGATTTGCTATACATCTAGGTTGCTAGATTTACTTTTGGTTGATTGCTGTTGGTTGGACTGTTTTGGGTGTTAGTTGCCTTTAATATTTGCTCCACACATCACTGTCTTGGTGAGATTTGTTAGTGATCCTTTGTTGAATTGTCTATTCAGGCCCTTTTAGCCAAAGGGTGTTGCTGACACTGGAGGAAAAACATTTACCTTATGAGCCAAAATTGGTTGATTTAAGAAACAAACCAGAATGGTGATCTTCTTGTCCATGTTTCACTTACAGACCACAAGTCATCAACTTTTTCTATCATCGTATTATTTTGTTTCCTTGTAATAATTTGTTTTGTTGGTTCAGGTTCCTTGAAATCAGTCCTGAAGGTAAAGTTCCCGTAATAAATTTTGATGGAAAGTGGGTTGCTGATTCAGATTTAATCACACAAACATTGGAGGAGAAGTATCCTAGCCCACCATTGGTGACACCACCTGAAAAGGCTACAGCGTATGTTTCTTGTTTATAGATTTCCTCATCATTTGGAGATACTTTGAATCTATATCTAGTTTTCTTGTACATGGCTGAGTTTTTTGAAAAATGCACGGTGATGCAATTATACAATCTTAAAACAGTTTCTTTCTTGCTCATCTTATATTTATTTTTCCCTTTATGTTACCGTGCTACTCAGTGTCAACTTTTTATTCAAGTAAACTGAATTAGCCCTTGAATCTGTCAGATATCGTCACTATAGTCCCTGAGTATATCAAAATTACAAAAGCATCCTTGAATGTATTTTTACTTACTCAATTTGTTCTTTGTATATGTCTTCCCTTGGTCAATTTGGTCCTCAGATATGTCTTTCGTTAGTCAGTAAGTATGGGCCATGAAATTACAAACGAGAGACAAACTCTGATGTTTTTTGTAATTTCAATGTATTCAGGAACTATAGTAACACCATCTCACTCATTTAGGGACTAAAATGACTGTTTAAATCCTTTTTGTTCTTTAATGTTTACATGGAGATATTAAATTTGCAACCATAATTGATGTTTTCATGTGTTTTTGTCTATAGTGGGTCAAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAAAGATCCCAATGACGGAACCGAACAAGCATTACTAAATGAACTGAGCTCCTTCAACGATTACCTCAAGGAAAATGTATGACTTTTTTCCCTTCTATTTTTGTCTCGGCTATTTGTTTGCAATCTTGTTTTAAACTTTCAGTATTTTAGGTCTCTCAATCTCTGACCTGGCATTACATCTTTTCCTGCATTATGGTCATGGACCATATCACTTCTCTTGTAGTGTGCATCGCTTGGCTAGTTCCTCTTGTACTCCATCTACGTGTGATGTTGCAAAACATTAAACGGGGATCGGCAAATAAATGCATGCTATATATAGTTGATAGCTTGATATATATTATTATCATTTGGTCAGTTTAAGACTTGTAAACTTTATGAATAATTGGATGTAAGCTATTTTGTAAACAATTTATTTAAGCAACATAAATTTCATATATATTTTTTAAATGCATGTAAATGTATATGATCCAACACATTTTTATTTATATAACTTTGAGGTCACTGTTTTCTTGTTTCGATCCTTCTGGATTTGTCTATAATTTTTTTTCTTCCTTTTTTCTTATAAAATGTGTCATCTGTGCAAATTTTTTCTTCTCACAGGGTCCTTTTGTCAATGGGAAAGACATATCTGCGGCTGACCTATCACTAGGACCAAAGCTATACCATTTGGAGATTGCTTTGGGACATTATAAGAAATGGACAGTACCTGATTCACTAACCTTTTTGAAGTCTTACTTGAAGGTACGTTCACAATAAGCCTCCTCACTCAACATCTATCATATTCTTTTACTTTTAGACAGTTTTCAAATCTAGAACTGAACGCACACTACTTTCTCAAACCCGTATTTATGATGCAGTTTCATTAATGCGAATAGTTTACAAAATTTGCGGAAAAAGATGCTATTCATTGTCCATGCTTAAAGATCATAGACTAATGAGTGAAAATGACTTATCAATAGGGAGACTTGAATTTGGAGTTTCTTCTAAAGCTCTAAATTCAAAAGTTTTTGGTAATGTGCTTTGGCCTTTGTAAACCTTTTTTTTCTTCATATATTCGAAGAGGTGTTTTCCCTATAGCCCGTTTTTGCAATTTTGAACTTTTTCTCAATACTCAAATGTTTCCGTAAGGGGCTTCCTCACACTTTTTCCTTACAAATAGTATGACACAAGCCCTTCTGTGCAAATACCGATTGCTAAAGGAGTGCTTCATAACAACCGCAGCCGGTAA

Protein sequence

>MS.gene62289.t1

MSTVRIQVSACALSATVNHLRYRPNYAVSTSSFNNGFSIKPLRVSMSSVPPSEPLEVAVKASLTTPNKIGDCPFSQRVLLTLEEKHLPYEPKLVDLRNKPEWFLEISPEGKVPVINFDGKWVADSDLITQTLEEKYPSPPLVTPPEKATAGSKIFSTFIGFLKSKDPNDGTEQALLNELSSFNDYLKENGPFVNGKDISAADLSLGPKLYHLEIALGHYKKWTVPDSLTFLKSYLKYDTSPSVQIPIAKGVLHNNRSR