AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0340170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340170 MtrunA17_Chr2g0329031 97.270 696 18 1 187 882 1 695 0.0 1425
Msa0340170 MtrunA17_Chr1g0207551 50.525 667 307 7 194 845 28 686 0.0 659
Msa0340170 MtrunA17_Chr3g0080351 47.432 662 310 5 187 827 63 707 0.0 628
Msa0340170 MtrunA17_Chr5g0448761 37.366 653 369 14 199 817 59 705 1.50e-135 424
Msa0340170 MtrunA17_Chr2g0291581 34.742 639 366 11 200 809 71 687 1.79e-116 370
Msa0340170 MtrunA17_Chr1g0202341 34.080 625 379 10 199 798 50 666 1.63e-115 368
Msa0340170 MtrunA17_Chr2g0296781 35.273 567 343 9 204 752 1 561 4.46e-112 360
Msa0340170 MtrunA17_Chr5g0441581 33.593 643 391 13 180 800 7 635 6.24e-109 351
Msa0340170 MtrunA17_Chr5g0440451 33.435 655 383 11 197 816 40 676 9.01e-109 357
Msa0340170 MtrunA17_Chr3g0118611 38.631 453 271 4 364 811 118 568 1.17e-101 334
Msa0340170 MtrunA17_Chr5g0448511 35.762 453 284 3 363 808 11 463 4.05e-100 323
Msa0340170 MtrunA17_Chr1g0196541 32.479 585 368 9 204 770 1 576 8.68e-100 328
Msa0340170 MtrunA17_Chr6g0477261 33.394 545 319 11 336 863 27 544 5.71e-99 323
Msa0340170 MtrunA17_Chr2g0291591 33.661 508 323 6 194 691 58 561 3.14e-87 289
Msa0340170 MtrunA17_Chr2g0287061 33.775 604 363 11 199 797 182 753 7.32e-87 295
Msa0340170 MtrunA17_Chr3g0082121 31.002 629 395 14 183 787 22 635 6.98e-86 289
Msa0340170 MtrunA17_Chr6g0458391 31.227 554 360 6 200 746 225 764 1.53e-84 287
Msa0340170 MtrunA17_Chr6g0458391 35.652 115 69 3 200 310 91 204 7.69e-11 66.2
Msa0340170 MtrunA17_Chr8g0363841 30.645 558 366 11 208 748 25 578 2.88e-84 284
Msa0340170 MtrunA17_Chr1g0203721 30.240 625 392 14 206 799 69 680 1.54e-82 284
Msa0340170 MtrunA17_Chr2g0324011 29.630 567 370 12 200 746 10 567 2.01e-82 277
Msa0340170 MtrunA17_Chr2g0276841 28.843 579 366 15 206 755 76 637 5.65e-75 259
Msa0340170 MtrunA17_Chr1g0198761 28.191 564 369 11 206 742 53 607 3.88e-73 256
Msa0340170 MtrunA17_Chr2g0287651 24.889 675 462 12 185 838 59 709 5.58e-66 238
Msa0340170 MtrunA17_Chr2g0294841 27.526 574 374 11 206 750 51 611 3.10e-65 233
Msa0340170 MtrunA17_Chr1g0203051 27.957 558 352 17 206 734 85 621 8.56e-59 213
Msa0340170 MtrunA17_Chr2g0290391 27.692 585 360 15 197 742 48 608 2.44e-50 189
Msa0340170 MtrunA17_Chr5g0431001 28.037 428 268 10 206 603 67 484 5.16e-45 170
Msa0340170 MtrunA17_Chr1g0164591 30.868 311 193 5 283 583 10 308 3.01e-42 157
Msa0340170 MtrunA17_Chr7g0258861 29.966 297 180 10 193 468 1 290 2.45e-32 128
Msa0340170 MtrunA17_Chr2g0282871 92.188 64 5 0 3 66 106 169 9.77e-32 126
Msa0340170 MtrunA17_Chr4g0046431 81.250 64 12 0 3 66 121 184 1.28e-26 111
Msa0340170 MtrunA17_Chr8g0367761 79.688 64 13 0 3 66 121 184 3.06e-26 108
Msa0340170 MtrunA17_Chr2g0324961 76.562 64 15 0 3 66 102 165 4.11e-25 106
Msa0340170 MtrunA17_Chr4g0040541 72.308 65 17 1 3 66 101 165 8.62e-23 99.8
Msa0340170 MtrunA17_Chr3g0078041 32.335 167 99 4 195 354 45 204 1.13e-18 86.3
Msa0340170 MtrunA17_Chr7g0233911 34.591 159 96 3 191 342 25 182 3.37e-18 84.3
Msa0340170 MtrunA17_Chr8g0389661 62.857 70 20 1 3 66 101 170 2.41e-17 86.3
Msa0340170 MtrunA17_Chr5g0422431 54.545 66 29 1 1 66 109 173 1.31e-14 77.4
Msa0340170 MtrunA17_Chr1g0198741 55.556 63 28 0 4 66 6 68 1.56e-13 72.4
Msa0340170 MtrunA17_Chr2g0329361 35.644 101 60 1 204 299 65 165 1.86e-13 71.2
Msa0340170 MtrunA17_Chr2g0308841 23.849 239 172 5 524 755 1 236 3.07e-13 70.9
Msa0340170 MtrunA17_Chr7g0227071 51.471 68 28 2 2 66 107 172 3.03e-12 70.1
Msa0340170 MtrunA17_Chr1g0198751 51.562 64 30 1 3 66 111 173 1.05e-11 68.2
Msa0340170 MtrunA17_Chr4g0075441 79.070 43 5 1 92 130 1 43 4.50e-11 60.5
Msa0340170 MtrunA17_Chr4g0033611 33.036 112 69 3 196 303 72 181 5.82e-11 63.9
Msa0340170 MtrunA17_Chr2g0329421 33.036 112 69 3 196 303 23 132 6.57e-11 63.2
Msa0340170 MtrunA17_Chr5g0401121 34.579 107 66 2 200 302 56 162 7.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340170 AT1G76320.1 62.936 688 245 6 204 882 1 687 0.0 888
Msa0340170 AT1G76320.4 62.936 688 245 6 204 882 1 687 0.0 888
Msa0340170 AT1G76320.2 63.028 687 244 6 204 882 1 685 0.0 888
Msa0340170 AT1G76320.3 63.111 675 233 4 204 873 1 664 0.0 885
Msa0340170 AT4G15090.1 51.752 628 282 6 199 810 50 672 0.0 670
Msa0340170 AT4G15090.5 51.752 628 282 6 199 810 50 672 0.0 670
Msa0340170 AT4G15090.3 51.752 628 282 6 199 810 50 672 0.0 670
Msa0340170 AT4G15090.2 51.752 628 282 6 199 810 50 672 0.0 670
Msa0340170 AT4G15090.4 51.752 628 282 6 199 810 50 672 0.0 670
Msa0340170 AT3G22170.2 47.764 626 293 5 199 807 69 677 0.0 619
Msa0340170 AT3G22170.1 47.764 626 293 5 199 807 69 677 0.0 619
Msa0340170 AT2G32250.5 42.949 624 322 4 185 807 23 613 1.91e-171 516
Msa0340170 AT2G32250.2 42.949 624 322 4 185 807 23 613 4.16e-171 517
Msa0340170 AT2G32250.4 42.949 624 322 4 185 807 23 613 4.16e-171 517
Msa0340170 AT2G32250.6 42.949 624 322 4 185 807 23 613 4.56e-171 517
Msa0340170 AT2G32250.1 42.949 624 322 4 185 807 23 613 4.56e-171 517
Msa0340170 AT2G32250.3 42.949 624 322 4 185 807 23 613 4.56e-171 517
Msa0340170 AT4G19990.3 46.656 628 283 9 205 810 26 623 6.45e-171 515
Msa0340170 AT4G19990.4 46.656 628 283 9 205 810 26 623 6.45e-171 515
Msa0340170 AT4G19990.5 46.656 628 283 9 205 810 26 623 9.01e-171 514
Msa0340170 AT4G19990.7 46.656 628 283 9 205 810 40 637 2.07e-170 514
Msa0340170 AT4G19990.6 46.656 628 283 9 205 810 26 623 2.42e-170 514
Msa0340170 AT4G19990.2 46.656 628 283 9 205 810 26 623 2.42e-170 514
Msa0340170 AT2G32250.8 43.802 605 306 4 204 807 1 572 1.45e-169 512
Msa0340170 AT2G32250.7 43.802 605 306 4 204 807 1 572 1.60e-169 512
Msa0340170 AT4G19990.1 45.868 593 269 9 240 810 4 566 4.04e-156 474
Msa0340170 AT4G38180.1 38.951 629 353 10 199 802 72 694 3.80e-141 439
Msa0340170 AT2G27110.2 34.429 639 380 13 187 812 34 646 2.61e-113 367
Msa0340170 AT2G27110.1 34.429 639 380 13 187 812 34 646 2.61e-113 367
Msa0340170 AT2G27110.3 37.748 453 276 4 364 812 51 501 1.69e-103 337
Msa0340170 AT1G52520.1 32.857 630 374 13 200 800 85 694 1.76e-103 337
Msa0340170 AT1G80010.1 31.761 636 387 12 200 803 95 715 3.84e-94 313
Msa0340170 AT3G06250.2 33.633 556 320 9 199 746 189 703 8.96e-92 307
Msa0340170 AT3G06250.1 33.633 556 320 9 199 746 189 703 8.96e-92 307
Msa0340170 AT3G06250.3 33.633 556 320 9 199 746 189 703 8.96e-92 307
Msa0340170 AT5G18960.2 32.796 558 335 9 194 746 205 727 1.87e-88 299
Msa0340170 AT5G18960.1 32.796 558 335 9 194 746 205 727 1.87e-88 299
Msa0340170 AT4G38170.1 34.899 447 277 6 368 806 21 461 1.90e-80 271
Msa0340170 AT1G10240.2 28.014 589 387 15 206 769 54 630 2.93e-69 243
Msa0340170 AT1G10240.1 28.014 589 387 15 206 769 54 630 2.93e-69 243
Msa0340170 AT5G28530.3 26.829 574 383 13 195 742 50 612 4.91e-51 191
Msa0340170 AT5G28530.2 26.829 574 383 13 195 742 50 612 4.91e-51 191
Msa0340170 AT5G28530.1 26.644 578 383 13 195 742 50 616 6.30e-51 191
Msa0340170 AT5G28530.4 26.455 567 335 17 195 742 50 553 3.97e-38 152
Msa0340170 AT5G28530.5 26.643 563 335 17 195 742 50 549 5.19e-38 151
Msa0340170 AT1G28470.1 75.000 64 16 0 3 66 130 193 3.35e-23 102
Msa0340170 AT4G28500.1 70.769 65 18 1 3 66 112 176 5.05e-22 98.2
Msa0340170 AT2G43280.1 31.544 149 96 2 199 341 21 169 6.45e-17 80.9
Msa0340170 AT4G29230.3 58.333 72 22 1 3 66 101 172 7.40e-16 81.6
Msa0340170 AT4G29230.1 58.333 72 22 1 3 66 101 172 9.06e-16 81.6
Msa0340170 AT4G29230.2 58.333 72 22 1 3 66 100 171 9.10e-16 81.6
Msa0340170 AT3G59470.3 39.216 102 56 3 205 302 75 174 3.10e-14 73.9
Msa0340170 AT3G59470.1 39.216 102 56 3 205 302 75 174 3.10e-14 73.9
Msa0340170 AT1G25580.1 52.308 65 30 1 2 66 110 173 3.22e-14 76.6
Msa0340170 AT3G59470.2 39.216 102 56 3 205 302 87 186 3.54e-14 74.3
Msa0340170 AT2G43280.2 30.827 133 86 2 215 341 2 134 4.67e-14 71.6
Msa0340170 AT3G07500.1 35.606 132 76 2 186 308 13 144 4.71e-14 72.8
Msa0340170 AT5G56620.2 55.714 70 25 2 3 66 101 170 7.34e-14 75.1
Msa0340170 AT5G56620.3 55.714 70 25 2 3 66 101 170 8.19e-14 75.1
Msa0340170 AT5G56620.1 55.714 70 25 2 3 66 101 170 9.69e-14 74.7
Msa0340170 AT4G12850.4 35.294 102 66 0 197 298 8 109 3.74e-13 68.2
Msa0340170 AT4G12850.2 35.294 102 66 0 197 298 8 109 4.51e-13 67.8
Msa0340170 AT4G12850.1 35.294 102 66 0 197 298 8 109 2.50e-12 67.0

Find 172 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTCCATTTCATTATT+AGG 0.082825 2_4:+61468667 None:intergenic
AATTAAAACGCTTAGATATT+TGG 0.177255 2_4:-61466339 Msa0340170:CDS
TATGGATTCTTCTATTATTA+TGG 0.187730 2_4:-61468707 Msa0340170:CDS
TCTAAAGGGTTGGAGGATTT+TGG 0.197839 2_4:-61468061 Msa0340170:CDS
CCTCCATTTAGGTGCAATTA+TGG 0.201667 2_4:-61468725 Msa0340170:CDS
CTTCAACATTGCAACCAATA+TGG 0.212680 2_4:+61466820 None:intergenic
ACCTTCTTCACCCAATATTA+TGG 0.238949 2_4:+61466947 None:intergenic
AAAGTTTCAGTTCGAGGTTT+TGG 0.254700 2_4:-61467294 Msa0340170:CDS
CAAATTCCATTTCATTATTA+GGG 0.256855 2_4:+61468668 None:intergenic
GAAAGTTACTACATGGCTTT+AGG 0.264793 2_4:-61466912 Msa0340170:CDS
TGTCACTTGTTTGAATATAA+AGG 0.267118 2_4:-61467143 Msa0340170:CDS
AATCCATAATTGCACCTAAA+TGG 0.271637 2_4:+61468722 None:intergenic
TACATGGCATGATAGCTTTA+TGG 0.278309 2_4:-61467714 Msa0340170:CDS
CAGCTTTAATAGCATCATTT+TGG 0.281024 2_4:+61467825 None:intergenic
CACTTTAAACTTCACATCAT+TGG 0.282499 2_4:+61469604 None:intergenic
AAGTCATTATTCCTCCATTT+AGG 0.297210 2_4:-61468736 Msa0340170:CDS
GTTTATGAAGGATATTTCTT+TGG 0.305630 2_4:-61467549 Msa0340170:CDS
GTTGTAAAATTTGGACCGTT+TGG 0.313864 2_4:-61469566 Msa0340170:CDS
ATGAATCGTCAACAAGATAA+AGG 0.325098 2_4:-61468223 Msa0340170:CDS
GATGGTGGAAGCTGGTTGAT+AGG 0.330003 2_4:-61467637 Msa0340170:CDS
AGTTAAGTAGTCGCCGATCT+AGG 0.332224 2_4:-61468579 Msa0340170:CDS
TCAATGGCATAAAAGAATTT+CGG 0.332652 2_4:+61468127 None:intergenic
CTTAAGAACTCAAGCTGTTT+CGG 0.341887 2_4:+61467737 None:intergenic
AAGCCATGTAGTAACTTTCT+TGG 0.341888 2_4:+61466916 None:intergenic
GGGGAAGGTGACTTTAATTC+AGG 0.347918 2_4:+61467362 None:intergenic
CCAAGCATCAAAATTTGCTT+TGG 0.356859 2_4:+61467394 None:intergenic
ACTTTAAACTTCACATCATT+GGG 0.375340 2_4:+61469605 None:intergenic
ACAAGATAAAGGGCGGAGTT+TGG 0.376984 2_4:-61468212 Msa0340170:CDS
TGTAGACGAGCCATAATATT+GGG 0.380324 2_4:-61466957 Msa0340170:CDS
GCAGCCTTAGCTACCCATAT+TGG 0.380779 2_4:-61466834 Msa0340170:CDS
ATCGGCTTAGAAATGTGTTC+TGG 0.382613 2_4:-61468090 Msa0340170:CDS
TTCAACATTGCAACCAATAT+GGG 0.390404 2_4:+61466821 None:intergenic
GTATCAGAATATTGATTGTT+TGG 0.395189 2_4:-61468254 Msa0340170:CDS
TTCAAACAAGTGACAGGAAC+AGG 0.401839 2_4:+61467151 None:intergenic
GAAACAAGATGGCGCAAAAC+AGG 0.406178 2_4:-61470815 Msa0340170:CDS
ATGTAGACGAGCCATAATAT+TGG 0.410423 2_4:-61466958 Msa0340170:CDS
CCGCGTCCTTCCCCGAAAAT+CGG 0.414368 2_4:-61468478 Msa0340170:CDS
TAACCATGGCTTTCAACAAA+TGG 0.415379 2_4:-61466557 Msa0340170:intron
CAAACATGGTTTGTAGCAAT+GGG 0.418261 2_4:-61467878 Msa0340170:CDS
CTGGGTTGATTCTAAAGGGT+TGG 0.419557 2_4:-61468071 Msa0340170:CDS
TTAAACTTAGAGATGTTAAG+TGG 0.419663 2_4:-61467613 Msa0340170:CDS
AGAGAAAACAGGATGGTAAA+TGG 0.421573 2_4:-61468432 Msa0340170:CDS
TTGCTTTAGAGCCTCGCTTA+AGG 0.423117 2_4:+61466887 None:intergenic
CATGTTGTCTAGGCTGTGTC+TGG 0.424066 2_4:+61470612 None:intergenic
ATGAAGGATATTTCTTTGGC+TGG 0.424174 2_4:-61467545 Msa0340170:CDS
TCAAGACCCTAATAATGAAA+TGG 0.426644 2_4:-61468674 Msa0340170:CDS
AGCCATGTAGTAACTTTCTT+GGG 0.427360 2_4:+61466917 None:intergenic
TGTTCCTGTTGTGTATGCTT+TGG 0.432715 2_4:+61470877 None:intergenic
CTATCAAAAGTTTCAGTTCG+AGG 0.433567 2_4:-61467300 Msa0340170:CDS
TCTTTGGCTGGCTTGTCTAC+CGG 0.435556 2_4:-61467533 Msa0340170:CDS
CTCTATCTTCAAGAATCAAT+TGG 0.436835 2_4:+61467429 None:intergenic
CATGTTCAACCAACATTGCT+TGG 0.439644 2_4:-61467950 Msa0340170:CDS
GAAGGGATTTAAGAAGATAC+TGG 0.441530 2_4:-61470759 Msa0340170:intron
AGGAGGTGTTGAAGGAAGTA+AGG 0.444639 2_4:-61466697 Msa0340170:CDS
ATCATTTAATCTCCGGACCT+TGG 0.446449 2_4:+61466983 None:intergenic
GTGTTCTGGGTTGATTCTAA+AGG 0.446481 2_4:-61468076 Msa0340170:CDS
TTACTTCCTTCAACACCTCC+TGG 0.448450 2_4:+61466699 None:intergenic
TGTTCTGGGTTGATTCTAAA+GGG 0.454484 2_4:-61468075 Msa0340170:CDS
AAAGAGTATGCAAAATCAGC+AGG 0.457157 2_4:-61468616 Msa0340170:CDS
TATGCAAAATCAGCAGGGTT+TGG 0.458192 2_4:-61468610 Msa0340170:CDS
GGATGGCGTTGAGCCCAAAC+CGG 0.468955 2_4:-61469660 Msa0340170:CDS
TCGGAGACCTTATCATTAGA+TGG 0.469626 2_4:+61466777 None:intergenic
CCTGTTGTGTATGCTTTGGA+AGG 0.470110 2_4:+61470881 None:intergenic
AGGAGTCCAGGAGGTGTTGA+AGG 0.470185 2_4:-61466705 Msa0340170:CDS
GGTTGATTCTAAAGGGTTGG+AGG 0.473041 2_4:-61468068 Msa0340170:CDS
TGAATTGTTTATGCATATGC+AGG 0.475105 2_4:-61468158 Msa0340170:CDS
GGATGGTTGTTTGTGGCGGC+CGG 0.475460 2_4:+61468857 None:intergenic
ATTGTTGTTCTACAAATGTC+TGG 0.476184 2_4:-61467101 Msa0340170:CDS
TATTATACCATCTAATGATA+AGG 0.478319 2_4:-61466784 Msa0340170:CDS
GCAAACATGGTTTGTAGCAA+TGG 0.480305 2_4:-61467879 Msa0340170:CDS
GTATCCTATTGGTGAAAACT+TGG 0.480416 2_4:-61467018 Msa0340170:CDS
ATTGCAGGAGTTGGCAAAGA+TGG 0.480751 2_4:-61470929 Msa0340170:intron
GTCATATAGGTGCCTCAGCT+TGG 0.482653 2_4:-61466595 Msa0340170:intron
AGTAAGAAGGCTGCAAGGAC+TGG 0.483811 2_4:-61466738 Msa0340170:CDS
ATATGGTAATAAACAACAAT+CGG 0.483815 2_4:-61468515 Msa0340170:CDS
ATGCTCTTCATTCAAATCAA+TGG 0.484513 2_4:+61468111 None:intergenic
CCTTCCAAAGCATACACAAC+AGG 0.484981 2_4:-61470881 Msa0340170:CDS
TACATAAATCATTTAATCTC+CGG 0.485589 2_4:+61466976 None:intergenic
GCTGCAAGGACTGGTGTAGC+TGG 0.488741 2_4:-61466729 Msa0340170:CDS
TCTTGAAGATAGAGATGAAG+AGG 0.488747 2_4:-61467420 Msa0340170:CDS
TGAAAAGAGATGGTGGAAGC+TGG 0.490757 2_4:-61467645 Msa0340170:CDS
TAAAACGCTTAGATATTTGG+AGG 0.491492 2_4:-61466336 Msa0340170:CDS
TTGGGTGCCAACGTTTATGA+AGG 0.495738 2_4:-61467561 Msa0340170:CDS
CGGAGGAAGAATTCGACTGC+AGG 0.496134 2_4:-61468298 Msa0340170:CDS
ATCAGAACTACATGGTAGAA+TGG 0.499877 2_4:-61467196 Msa0340170:CDS
CAAAGTATATATTGAAAAGA+TGG 0.500276 2_4:-61467061 Msa0340170:CDS
ACAAATGTATATATCAATCA+TGG 0.501166 2_4:-61467682 Msa0340170:CDS
GGTGTAGCTGGTAGGAGTCC+AGG 0.504600 2_4:-61466717 Msa0340170:CDS
TGAATCGTCAACAAGATAAA+GGG 0.505965 2_4:-61468222 Msa0340170:CDS
TCGGCTTAGAAATGTGTTCT+GGG 0.507619 2_4:-61468089 Msa0340170:CDS
GCTTTAAGTAGGTATCCTAT+TGG 0.508050 2_4:-61467029 Msa0340170:CDS
AAACCATTTGTTGAAAGCCA+TGG 0.511060 2_4:+61466554 None:intergenic
GTATGATGATCGTGCATGTT+GGG 0.511716 2_4:-61467579 Msa0340170:CDS
GCCATAATATTGGGTGAAGA+AGG 0.513780 2_4:-61466948 Msa0340170:CDS
AAATCCCTTCACAACACCAT+TGG 0.513981 2_4:+61470772 None:intergenic
TATGCATGTGAAGAGAAAAC+AGG 0.515366 2_4:-61468443 Msa0340170:CDS
TTTATATTCAAACAAGTGAC+AGG 0.515815 2_4:+61467145 None:intergenic
AGCAATTTGAAAAGAGATGG+TGG 0.516518 2_4:-61467652 Msa0340170:CDS
AGCTTGAGTTCTTAAGTACA+TGG 0.520700 2_4:-61467730 Msa0340170:CDS
ATCCCAAGAAAGTTACTACA+TGG 0.521925 2_4:-61466919 Msa0340170:CDS
TTGTGTGGCTACTGCAAACA+TGG 0.522261 2_4:-61467892 Msa0340170:CDS
TAAACTTTCAAAGCGCGAGC+CGG 0.522584 2_4:+61467514 None:intergenic
ATGGAATTACCATGTTGTCT+AGG 0.524147 2_4:+61470602 None:intergenic
TTTATTGAGTAGACATTGAG+TGG 0.526752 2_4:-61469704 Msa0340170:intron
GATGGCGTTGAGCCCAAACC+GGG 0.529005 2_4:-61469659 Msa0340170:CDS
ATTCTTTCGATGCCCTAGAT+CGG 0.531419 2_4:+61468566 None:intergenic
AAGAGGTTCAATCCAAGGTC+CGG 0.533736 2_4:-61466995 Msa0340170:CDS
ATTAATGAAGAAGAAAGAGA+TGG 0.533748 2_4:-61470662 Msa0340170:intron
CAACAATTGCATGTCTACAT+AGG 0.534107 2_4:+61467117 None:intergenic
TATTGGTGAAAACTTGGAAG+AGG 0.534284 2_4:-61467012 Msa0340170:CDS
GTTAAGTAGTCGCCGATCTA+GGG 0.536955 2_4:-61468578 Msa0340170:CDS
TTGATTTGAATGAAGAGCAT+CGG 0.543981 2_4:-61468108 Msa0340170:CDS
GAAATATCCTTCATAAACGT+TGG 0.547589 2_4:+61467554 None:intergenic
AAGAAGGAATTGAAACAAGA+TGG 0.551039 2_4:-61470826 Msa0340170:CDS
GTCTTAATGAAGTATCAACT+TGG 0.551353 2_4:+61467468 None:intergenic
CGAAAATAATCAGAACTACA+TGG 0.553895 2_4:-61467204 Msa0340170:CDS
AGAAGCAATTGAGCATTCCC+CGG 0.554547 2_4:+61468181 None:intergenic
GAAAATGAATACGAGTAAGA+AGG 0.555256 2_4:-61466751 Msa0340170:CDS
GGCTTTAGGTTCCTTAAGCG+AGG 0.555372 2_4:-61466898 Msa0340170:CDS
CATCTAAAGAAAGAAAATGA+TGG 0.556147 2_4:-61467257 Msa0340170:CDS
GCAACCAATATGGGTAGCTA+AGG 0.558177 2_4:+61466830 None:intergenic
GAGGTTCACACTGATGAAGA+AGG 0.561224 2_4:-61470842 Msa0340170:CDS
CACTGATCTTCTCAACTCCC+CGG 0.562238 2_4:-61468903 Msa0340170:CDS
CAAGGACTGGTGTAGCTGGT+AGG 0.565226 2_4:-61466725 Msa0340170:CDS
ATACGTTGAGTAATGATGTT+CGG 0.569177 2_4:-61468327 Msa0340170:CDS
CATCACCGGAGTTTGTTCTC+CGG 0.570864 2_4:-61468876 Msa0340170:CDS
AACTCCCCGGAAAACATCAC+CGG 0.571503 2_4:-61468890 Msa0340170:CDS
CCTCAGCTTGGAGCAGTAAG+TGG 0.574296 2_4:-61466583 Msa0340170:CDS
ATTGGGTGGTTTGCCTACGC+CGG 0.576618 2_4:+61469622 None:intergenic
AAGAATTCGACTGCAGGTGG+TGG 0.578130 2_4:-61468292 Msa0340170:CDS
TGTATGATGATCGTGCATGT+TGG 0.580054 2_4:-61467580 Msa0340170:CDS
AGGAGCAATTTGAAAAGAGA+TGG 0.582141 2_4:-61467655 Msa0340170:CDS
AATGCACATCCAAGCAATGT+TGG 0.583618 2_4:+61467941 None:intergenic
AATACCTGGATGGTTGTTTG+TGG 0.584518 2_4:+61468850 None:intergenic
GGACAAACGTCGCTTTAAGT+AGG 0.584827 2_4:-61467040 Msa0340170:CDS
ACCTGGATGGTTGTTTGTGG+CGG 0.584934 2_4:+61468853 None:intergenic
TAAACTTAGAGATGTTAAGT+GGG 0.586727 2_4:-61467612 Msa0340170:CDS
TTAAACTTCACATCATTGGG+TGG 0.587320 2_4:+61469608 None:intergenic
CTTGGAAGAGGTTCAATCCA+AGG 0.589927 2_4:-61467000 Msa0340170:CDS
GCCGCCACAAACAACCATCC+AGG 0.591353 2_4:-61468854 Msa0340170:intron
CAGACACAGCCTAGACAACA+TGG 0.593480 2_4:-61470611 Msa0340170:intron
GTGGAACATGTGGCAGAGGA+TGG 0.597302 2_4:-61469677 Msa0340170:CDS
TCACACATAAACGATCCAAA+CGG 0.598187 2_4:+61469551 None:intergenic
TGTTGAAGGAAGTAAGGGAA+AGG 0.609259 2_4:-61466691 Msa0340170:intron
GTAATGATGTTCGGATGAGA+CGG 0.611128 2_4:-61468318 Msa0340170:CDS
CCATAATTGCACCTAAATGG+AGG 0.612597 2_4:+61468725 None:intergenic
CATGGTGGAACATGTGGCAG+AGG 0.614752 2_4:-61469681 Msa0340170:CDS
GCAGTAAGTGGTAGTAACCA+TGG 0.616206 2_4:-61466571 Msa0340170:CDS
AGGAAGAATTCGACTGCAGG+TGG 0.619877 2_4:-61468295 Msa0340170:CDS
CGGGGAGTTGAGAAGATCAG+TGG 0.620375 2_4:+61468904 None:intergenic
GGAGGTGTTGAAGGAAGTAA+GGG 0.627245 2_4:-61466696 Msa0340170:CDS
CCACTTACTGCTCCAAGCTG+AGG 0.628390 2_4:+61466583 None:intergenic
AAGAGTATGCAAAATCAGCA+GGG 0.632144 2_4:-61468615 Msa0340170:CDS
AAGCATACACAACAGGAACA+AGG 0.635238 2_4:-61470874 Msa0340170:CDS
GCAATGTTGGTTGAACATGA+TGG 0.636690 2_4:+61467954 None:intergenic
AGAATGGAACACATCAAACT+CGG 0.636732 2_4:-61467180 Msa0340170:CDS
AACATGGTTTGTAGCAATGG+GGG 0.637044 2_4:-61467876 Msa0340170:CDS
AGGAACAAGGAAAAGAAGAG+AGG 0.640925 2_4:-61470861 Msa0340170:CDS
TGAGTAGACATTGAGTGGCA+TGG 0.645736 2_4:-61469699 Msa0340170:intron
ACATGCACGATCATCATACA+AGG 0.650096 2_4:+61467583 None:intergenic
GGCGGCCGGAGAACAAACTC+CGG 0.652729 2_4:+61468871 None:intergenic
GAGTGGCATGGTGGAACATG+TGG 0.653104 2_4:-61469687 Msa0340170:CDS
ATCGTCAACAAGATAAAGGG+CGG 0.671459 2_4:-61468219 Msa0340170:CDS
TATATATCAATCATGGACAG+AGG 0.673001 2_4:-61467675 Msa0340170:CDS
ATACGAGTAAGAAGGCTGCA+AGG 0.675579 2_4:-61466743 Msa0340170:CDS
ATGATGTTCGGATGAGACGG+AGG 0.681860 2_4:-61468315 Msa0340170:CDS
AAGCAAGTATAAGATACCGT+TGG 0.690005 2_4:-61467996 Msa0340170:CDS
AAACATGGTTTGTAGCAATG+GGG 0.692875 2_4:-61467877 Msa0340170:CDS
CATGTGAAGAGAAAACAGGA+TGG 0.699872 2_4:-61468439 Msa0340170:CDS
GTAGCTGGTAGGAGTCCAGG+AGG 0.701373 2_4:-61466714 Msa0340170:CDS
TGGTCAGTTAGAATCACCTG+CGG 0.710297 2_4:+61467845 None:intergenic
GTAGACATTGAGTGGCATGG+TGG 0.778401 2_4:-61469696 Msa0340170:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATGATTTTTTTTAGAT+GGG + chr2_4:61468584-61468603 None:intergenic 10.0%
!!! AAAAAATGATTTTTTTTAGA+TGG + chr2_4:61468585-61468604 None:intergenic 10.0%
!!! TACACTTATTTTAAAATGTA+TGG - chr2_4:61466383-61466402 Msa0340170:intron 15.0%
!! TAAATTATGTAAAATATTGC+AGG - chr2_4:61466425-61466444 Msa0340170:intron 15.0%
!! TATGAAAAAATAATGAACAA+AGG - chr2_4:61466809-61466828 Msa0340170:CDS 15.0%
!!! AAGGTTATTTTTGTATTTTT+AGG - chr2_4:61466989-61467008 Msa0340170:CDS 15.0%
!!! AAATTTTCATGTATTAGATA+TGG - chr2_4:61468837-61468856 Msa0340170:intron 15.0%
!!! GTTATTTTTGTATTTTTAGG+TGG - chr2_4:61466992-61467011 Msa0340170:CDS 20.0%
!!! AAATAAATAAATGACTTGTG+CGG + chr2_4:61467631-61467650 None:intergenic 20.0%
!!! ATGAATGTGTATTTTTTGAT+TGG + chr2_4:61468307-61468326 None:intergenic 20.0%
!! ATTTGAAAAAAGTAAATACC+TGG + chr2_4:61468536-61468555 None:intergenic 20.0%
!! TATGGATTCTTCTATTATTA+TGG - chr2_4:61468662-61468681 Msa0340170:CDS 20.0%
!! CAAATTCCATTTCATTATTA+GGG + chr2_4:61468704-61468723 None:intergenic 20.0%
!! TCAAATTCCATTTCATTATT+AGG + chr2_4:61468705-61468724 None:intergenic 20.0%
!! ATATGGTAATAAACAACAAT+CGG - chr2_4:61468854-61468873 Msa0340170:intron 20.0%
!!! GTATGTTTATAGTTTTGTTA+AGG - chr2_4:61468959-61468978 Msa0340170:intron 20.0%
!! ACAAATGTATATATCAATCA+TGG - chr2_4:61469687-61469706 Msa0340170:CDS 20.0%
!!! CATCTTTTCAATATATACTT+TGG + chr2_4:61470310-61470329 None:intergenic 20.0%
!! CAAAGTATATATTGAAAAGA+TGG - chr2_4:61470308-61470327 Msa0340170:intron 20.0%
!! TACATAAATCATTTAATCTC+CGG + chr2_4:61470396-61470415 None:intergenic 20.0%
!! TATTATACCATCTAATGATA+AGG - chr2_4:61470585-61470604 Msa0340170:intron 20.0%
!!! AATTTTAAAATAGTACAAGG+AGG + chr2_4:61470731-61470750 None:intergenic 20.0%
!!! GACAATTTTAAAATAGTACA+AGG + chr2_4:61470734-61470753 None:intergenic 20.0%
!! AATTAAAACGCTTAGATATT+TGG - chr2_4:61471030-61471049 Msa0340170:intron 20.0%
!!! AAATTCGTCACTTTTTTCAT+AGG - chr2_4:61466465-61466484 Msa0340170:intron 25.0%
! TAAACCAAATATTGCAAAGA+AGG - chr2_4:61466638-61466657 Msa0340170:intron 25.0%
! ATTAATGAAGAAGAAAGAGA+TGG - chr2_4:61466707-61466726 Msa0340170:CDS 25.0%
! CGAATCTCTTACATTATTAA+TGG + chr2_4:61466789-61466808 None:intergenic 25.0%
! AAAATAATGAACAAAGGAAG+TGG - chr2_4:61466815-61466834 Msa0340170:CDS 25.0%
!! GAAAGAAAAAATGGTGTTTT+GGG + chr2_4:61467262-61467281 None:intergenic 25.0%
! ACTTTAAACTTCACATCATT+GGG + chr2_4:61467767-61467786 None:intergenic 25.0%
!! CCAAATTTTACAACTTGAAA+AGG + chr2_4:61467797-61467816 None:intergenic 25.0%
!!! CCTTTTCAAGTTGTAAAATT+TGG - chr2_4:61467794-61467813 Msa0340170:CDS 25.0%
!! GTATCAGAATATTGATTGTT+TGG - chr2_4:61469115-61469134 Msa0340170:intron 25.0%
! TCAATGGCATAAAAGAATTT+CGG + chr2_4:61469245-61469264 None:intergenic 25.0%
! TTAAACTTAGAGATGTTAAG+TGG - chr2_4:61469756-61469775 Msa0340170:intron 25.0%
! TAAACTTAGAGATGTTAAGT+GGG - chr2_4:61469757-61469776 Msa0340170:intron 25.0%
! GTTTATGAAGGATATTTCTT+TGG - chr2_4:61469820-61469839 Msa0340170:intron 25.0%
!! CATCATTTTCTTTCTTTAGA+TGG + chr2_4:61470114-61470133 None:intergenic 25.0%
! CATCTAAAGAAAGAAAATGA+TGG - chr2_4:61470112-61470131 Msa0340170:intron 25.0%
! TTTATATTCAAACAAGTGAC+AGG + chr2_4:61470227-61470246 None:intergenic 25.0%
!! TGTCACTTGTTTGAATATAA+AGG - chr2_4:61470226-61470245 Msa0340170:intron 25.0%
!! TTTTCAATATATACTTTGGC+GGG + chr2_4:61470306-61470325 None:intergenic 25.0%
!! CTTTTCAATATATACTTTGG+CGG + chr2_4:61470307-61470326 None:intergenic 25.0%
!! TTCTTACTCGTATTCATTTT+CGG + chr2_4:61470619-61470638 None:intergenic 25.0%
!!! TTTTAAAATTGTCTCTGACT+TGG - chr2_4:61470741-61470760 Msa0340170:intron 25.0%
TTGTTTATAAATGTGACCAG+AGG - chr2_4:61466342-61466361 Msa0340170:CDS 30.0%
TGTTTATAAATGTGACCAGA+GGG - chr2_4:61466343-61466362 Msa0340170:CDS 30.0%
ATGTAAAATATTGCAGGAGT+TGG - chr2_4:61466431-61466450 Msa0340170:intron 30.0%
AAGAAGGAATTGAAACAAGA+TGG - chr2_4:61466543-61466562 Msa0340170:intron 30.0%
!!! ACTAGAGCTATTTTTTCCAA+TGG - chr2_4:61466581-61466600 Msa0340170:CDS 30.0%
CTTTCCTTCTTTGCAATATT+TGG + chr2_4:61466645-61466664 None:intergenic 30.0%
ACTGTTATTACCAATTACCA+TGG + chr2_4:61466841-61466860 None:intergenic 30.0%
AATAACCTTTATAAGACGTC+CGG + chr2_4:61466978-61466997 None:intergenic 30.0%
CCTTGAAATATAATCTCATG+AGG + chr2_4:61467051-61467070 None:intergenic 30.0%
CCTCATGAGATTATATTTCA+AGG - chr2_4:61467048-61467067 Msa0340170:CDS 30.0%
TCTTCAAAGGAAAGTAGATT+GGG + chr2_4:61467074-61467093 None:intergenic 30.0%
!! GTAATCTGGTCTTTTACTTT+GGG + chr2_4:61467145-61467164 None:intergenic 30.0%
! GGAAAGAAAAAATGGTGTTT+TGG + chr2_4:61467263-61467282 None:intergenic 30.0%
!! CTCAAAAATTCGCACTTTTT+GGG + chr2_4:61467301-61467320 None:intergenic 30.0%
! ACTCAAAAATTCGCACTTTT+TGG + chr2_4:61467302-61467321 None:intergenic 30.0%
GCAAAGCAAGTAAAAAAAAG+TGG + chr2_4:61467605-61467624 None:intergenic 30.0%
TTTATTGAGTAGACATTGAG+TGG - chr2_4:61467665-61467684 Msa0340170:CDS 30.0%
CACTTTAAACTTCACATCAT+TGG + chr2_4:61467768-61467787 None:intergenic 30.0%
CGACAGTTTAAGAAGTTTAT+CGG + chr2_4:61467904-61467923 None:intergenic 30.0%
CTTCTTAAACTGTCGTAATT+TGG - chr2_4:61467909-61467928 Msa0340170:CDS 30.0%
TAGCGTAACTTAACATACTT+AGG - chr2_4:61468223-61468242 Msa0340170:CDS 30.0%
AGCGTAACTTAACATACTTA+GGG - chr2_4:61468224-61468243 Msa0340170:CDS 30.0%
GAAAAAAGTAAATACCTGGA+TGG + chr2_4:61468532-61468551 None:intergenic 30.0%
AAGTCATTATTCCTCCATTT+AGG - chr2_4:61468633-61468652 Msa0340170:CDS 30.0%
AATCCATAATTGCACCTAAA+TGG + chr2_4:61468650-61468669 None:intergenic 30.0%
TCAAGACCCTAATAATGAAA+TGG - chr2_4:61468695-61468714 Msa0340170:CDS 30.0%
ATACGTTGAGTAATGATGTT+CGG - chr2_4:61469042-61469061 Msa0340170:intron 30.0%
ATGAATCGTCAACAAGATAA+AGG - chr2_4:61469146-61469165 Msa0340170:intron 30.0%
TGAATCGTCAACAAGATAAA+GGG - chr2_4:61469147-61469166 Msa0340170:intron 30.0%
TGAATTGTTTATGCATATGC+AGG - chr2_4:61469211-61469230 Msa0340170:intron 30.0%
ATGCTCTTCATTCAAATCAA+TGG + chr2_4:61469261-61469280 None:intergenic 30.0%
! TTGATTTGAATGAAGAGCAT+CGG - chr2_4:61469261-61469280 Msa0340170:intron 30.0%
!! AGACTGTATTTACTTTTGTG+TGG - chr2_4:61469462-61469481 Msa0340170:intron 30.0%
!! CAGCTTTAATAGCATCATTT+TGG + chr2_4:61469547-61469566 None:intergenic 30.0%
ACAAAAACAATTACGTGTTC+CGG + chr2_4:61469588-61469607 None:intergenic 30.0%
!!! CACGTAATTGTTTTTGTTTG+TGG - chr2_4:61469591-61469610 Msa0340170:CDS 30.0%
!! TTTTTGTTTGTGGCATGTTT+TGG - chr2_4:61469601-61469620 Msa0340170:CDS 30.0%
TATATATCAATCATGGACAG+AGG - chr2_4:61469694-61469713 Msa0340170:CDS 30.0%
GAAATATCCTTCATAAACGT+TGG + chr2_4:61469818-61469837 None:intergenic 30.0%
! GTCTTAATGAAGTATCAACT+TGG + chr2_4:61469904-61469923 None:intergenic 30.0%
CTCTATCTTCAAGAATCAAT+TGG + chr2_4:61469943-61469962 None:intergenic 30.0%
CGAAAATAATCAGAACTACA+TGG - chr2_4:61470165-61470184 Msa0340170:intron 30.0%
! ATTGTTGTTCTACAAATGTC+TGG - chr2_4:61470268-61470287 Msa0340170:intron 30.0%
TTCAACATTGCAACCAATAT+GGG + chr2_4:61470551-61470570 None:intergenic 30.0%
GAAAATGAATACGAGTAAGA+AGG - chr2_4:61470618-61470637 Msa0340170:CDS 30.0%
TGGCATTCTTTATGTCATAT+AGG - chr2_4:61470761-61470780 Msa0340170:CDS 30.0%
TGCATTTAGACAAAACTAAG+AGG + chr2_4:61470903-61470922 None:intergenic 30.0%
TCCAAAATCTAAACCAGTAA+GGG + chr2_4:61471008-61471027 None:intergenic 30.0%
TAAAACGCTTAGATATTTGG+AGG - chr2_4:61471033-61471052 Msa0340170:intron 30.0%
GTCAATTTATATACTCCCTC+TGG + chr2_4:61466361-61466380 None:intergenic 35.0%
!!! TTTTTCCAATGGTGTTGTGA+AGG - chr2_4:61466592-61466611 Msa0340170:intron 35.0%
!!! TTTTCCAATGGTGTTGTGAA+GGG - chr2_4:61466593-61466612 Msa0340170:intron 35.0%
GAAGGGATTTAAGAAGATAC+TGG - chr2_4:61466610-61466629 Msa0340170:intron 35.0%
AAAGCCACAGAAGACTAATT+GGG - chr2_4:61466661-61466680 Msa0340170:intron 35.0%
GTGATGCATCAAAGACTAAT+TGG - chr2_4:61466683-61466702 Msa0340170:intron 35.0%
ATGGAATTACCATGTTGTCT+AGG + chr2_4:61466770-61466789 None:intergenic 35.0%
!! GGCACATTTTTCAAACTGTT+GGG + chr2_4:61466870-61466889 None:intergenic 35.0%
!! AGGCACATTTTTCAAACTGT+TGG + chr2_4:61466871-61466890 None:intergenic 35.0%
CAGTTTGAAAAATGTGCCTT+CGG - chr2_4:61466872-61466891 Msa0340170:CDS 35.0%
! TTTTTCTCATTTTGCACCTC+CGG + chr2_4:61466908-61466927 None:intergenic 35.0%
CTCTTCAAAGGAAAGTAGAT+TGG + chr2_4:61467075-61467094 None:intergenic 35.0%
!! TTTTGATTGGAGCTCTTCAA+AGG + chr2_4:61467087-61467106 None:intergenic 35.0%
! AAGAGCAGGATTCTTTTGAT+TGG + chr2_4:61467100-61467119 None:intergenic 35.0%
AAATCATTTGGGTAAAGAGC+AGG + chr2_4:61467114-61467133 None:intergenic 35.0%
!! GGTAATCTGGTCTTTTACTT+TGG + chr2_4:61467146-61467165 None:intergenic 35.0%
!!! ACTTTTTGGGTTTTTGAAGG+TGG + chr2_4:61467288-61467307 None:intergenic 35.0%
! CAGGAAAATAGGATGAGTTT+TGG + chr2_4:61467409-61467428 None:intergenic 35.0%
! CAAAACTCATCCTATTTTCC+TGG - chr2_4:61467407-61467426 Msa0340170:CDS 35.0%
! ATTTTTGTCAGTAGGTGCTA+GGG - chr2_4:61467449-61467468 Msa0340170:CDS 35.0%
GGCGCAAAATTTCAAAATCT+GGG + chr2_4:61467584-61467603 None:intergenic 35.0%
TGGCGCAAAATTTCAAAATC+TGG + chr2_4:61467585-61467604 None:intergenic 35.0%
TTAAACTTCACATCATTGGG+TGG + chr2_4:61467764-61467783 None:intergenic 35.0%
GTTGTAAAATTTGGACCGTT+TGG - chr2_4:61467803-61467822 Msa0340170:CDS 35.0%
TCACACATAAACGATCCAAA+CGG + chr2_4:61467821-61467840 None:intergenic 35.0%
TATGAATGTGACGTGATTAC+AGG - chr2_4:61467938-61467957 Msa0340170:CDS 35.0%
GTTAACATGCGTTAGTGTAA+TGG + chr2_4:61468082-61468101 None:intergenic 35.0%
GCGTAACTTAACATACTTAG+GGG - chr2_4:61468225-61468244 Msa0340170:CDS 35.0%
!! GCAGTTTGGTCTTTTACTTT+GGG - chr2_4:61468247-61468266 Msa0340170:CDS 35.0%
!!! TTTTTTGGAGCTGTTAAGGT+TGG + chr2_4:61468393-61468412 None:intergenic 35.0%
!!! TGCATTTTTTGGAGCTGTTA+AGG + chr2_4:61468397-61468416 None:intergenic 35.0%
! AAGTTGTTTGAGACACTACA+AGG + chr2_4:61468436-61468455 None:intergenic 35.0%
TGGGATAATTCAAATCACGT+TGG + chr2_4:61468565-61468584 None:intergenic 35.0%
! AAAGAGTATGCAAAATCAGC+AGG - chr2_4:61468753-61468772 Msa0340170:intron 35.0%
! AAGAGTATGCAAAATCAGCA+GGG - chr2_4:61468754-61468773 Msa0340170:intron 35.0%
!! TTGCTTTACAACCGATTTTC+GGG + chr2_4:61468905-61468924 None:intergenic 35.0%
!! CTTGCTTTACAACCGATTTT+CGG + chr2_4:61468906-61468925 None:intergenic 35.0%
TATGCATGTGAAGAGAAAAC+AGG - chr2_4:61468926-61468945 Msa0340170:CDS 35.0%
AGAGAAAACAGGATGGTAAA+TGG - chr2_4:61468937-61468956 Msa0340170:intron 35.0%
!!! CTGCTCAAGCTCATTTTTTT+CGG - chr2_4:61469003-61469022 Msa0340170:intron 35.0%
!!! CTCATTTTTTTCGGAGTCAT+AGG - chr2_4:61469012-61469031 Msa0340170:intron 35.0%
!! TGTTCTGGGTTGATTCTAAA+GGG - chr2_4:61469294-61469313 Msa0340170:intron 35.0%
AAGCAAGTATAAGATACCGT+TGG - chr2_4:61469373-61469392 Msa0340170:intron 35.0%
! CAAACATGGTTTGTAGCAAT+GGG - chr2_4:61469491-61469510 Msa0340170:intron 35.0%
! AAACATGGTTTGTAGCAATG+GGG - chr2_4:61469492-61469511 Msa0340170:intron 35.0%
CAAAAACAATTACGTGTTCC+GGG + chr2_4:61469587-61469606 None:intergenic 35.0%
CTTAAGAACTCAAGCTGTTT+CGG + chr2_4:61469635-61469654 None:intergenic 35.0%
AGCTTGAGTTCTTAAGTACA+TGG - chr2_4:61469639-61469658 Msa0340170:CDS 35.0%
! TACATGGCATGATAGCTTTA+TGG - chr2_4:61469655-61469674 Msa0340170:CDS 35.0%
AGGAGCAATTTGAAAAGAGA+TGG - chr2_4:61469714-61469733 Msa0340170:intron 35.0%
AGCAATTTGAAAAGAGATGG+TGG - chr2_4:61469717-61469736 Msa0340170:intron 35.0%
ATGAAGGATATTTCTTTGGC+TGG - chr2_4:61469824-61469843 Msa0340170:intron 35.0%
TCTTGAAGATAGAGATGAAG+AGG - chr2_4:61469949-61469968 Msa0340170:intron 35.0%
! CCAAGCATCAAAATTTGCTT+TGG + chr2_4:61469978-61469997 None:intergenic 35.0%
!! CCAAAGCAAATTTTGATGCT+TGG - chr2_4:61469975-61469994 Msa0340170:intron 35.0%
!!! ACAGCAGTTGTTTTTCGAAA+GGG + chr2_4:61470030-61470049 None:intergenic 35.0%
!!! AACAGCAGTTGTTTTTCGAA+AGG + chr2_4:61470031-61470050 None:intergenic 35.0%
CTATCAAAAGTTTCAGTTCG+AGG - chr2_4:61470069-61470088 Msa0340170:intron 35.0%
! AAAGTTTCAGTTCGAGGTTT+TGG - chr2_4:61470075-61470094 Msa0340170:intron 35.0%
! AAGTTTCAGTTCGAGGTTTT+GGG - chr2_4:61470076-61470095 Msa0340170:intron 35.0%
ATCAGAACTACATGGTAGAA+TGG - chr2_4:61470173-61470192 Msa0340170:intron 35.0%
AGAATGGAACACATCAAACT+CGG - chr2_4:61470189-61470208 Msa0340170:intron 35.0%
CAACAATTGCATGTCTACAT+AGG + chr2_4:61470255-61470274 None:intergenic 35.0%
! GCTTTAAGTAGGTATCCTAT+TGG - chr2_4:61470340-61470359 Msa0340170:intron 35.0%
GTATCCTATTGGTGAAAACT+TGG - chr2_4:61470351-61470370 Msa0340170:intron 35.0%
! TCTTCCAAGTTTTCACCAAT+AGG + chr2_4:61470358-61470377 None:intergenic 35.0%
TATTGGTGAAAACTTGGAAG+AGG - chr2_4:61470357-61470376 Msa0340170:intron 35.0%
ATGTAGACGAGCCATAATAT+TGG - chr2_4:61470411-61470430 Msa0340170:intron 35.0%
TGTAGACGAGCCATAATATT+GGG - chr2_4:61470412-61470431 Msa0340170:intron 35.0%
ACCTTCTTCACCCAATATTA+TGG + chr2_4:61470425-61470444 None:intergenic 35.0%
ATCCCAAGAAAGTTACTACA+TGG - chr2_4:61470450-61470469 Msa0340170:intron 35.0%
AGCCATGTAGTAACTTTCTT+GGG + chr2_4:61470455-61470474 None:intergenic 35.0%
AAGCCATGTAGTAACTTTCT+TGG + chr2_4:61470456-61470475 None:intergenic 35.0%
GAAAGTTACTACATGGCTTT+AGG - chr2_4:61470457-61470476 Msa0340170:intron 35.0%
CTTCAACATTGCAACCAATA+TGG + chr2_4:61470552-61470571 None:intergenic 35.0%
! ACTCGTATTCATTTTCGGAT+CGG + chr2_4:61470614-61470633 None:intergenic 35.0%
TAACCATGGCTTTCAACAAA+TGG - chr2_4:61470812-61470831 Msa0340170:CDS 35.0%
! AAACCATTTGTTGAAAGCCA+TGG + chr2_4:61470818-61470837 None:intergenic 35.0%
GAACGCAATAGAAAAAGTCA+GGG + chr2_4:61470848-61470867 None:intergenic 35.0%
TGAACGCAATAGAAAAAGTC+AGG + chr2_4:61470849-61470868 None:intergenic 35.0%
TCCGACAGAATGTAATGAAA+GGG + chr2_4:61470935-61470954 None:intergenic 35.0%
ATCCGACAGAATGTAATGAA+AGG + chr2_4:61470936-61470955 None:intergenic 35.0%
!!! TCCCTTACTGGTTTAGATTT+TGG - chr2_4:61471004-61471023 Msa0340170:intron 35.0%
CTCCAAAATCTAAACCAGTA+AGG + chr2_4:61471009-61471028 None:intergenic 35.0%
TGTTCCTGTTGTGTATGCTT+TGG + chr2_4:61466495-61466514 None:intergenic 40.0%
AAGCATACACAACAGGAACA+AGG - chr2_4:61466495-61466514 Msa0340170:intron 40.0%
AGGAACAAGGAAAAGAAGAG+AGG - chr2_4:61466508-61466527 Msa0340170:intron 40.0%
AAATCCCTTCACAACACCAT+TGG + chr2_4:61466600-61466619 None:intergenic 40.0%
GAAAGCCACAGAAGACTAAT+TGG - chr2_4:61466660-61466679 Msa0340170:intron 40.0%
!! ATCACCCAATTAGTCTTCTG+TGG + chr2_4:61466668-61466687 None:intergenic 40.0%
TAGGTGGCCTAAAGAGATAT+TGG - chr2_4:61467008-61467027 Msa0340170:CDS 40.0%
AGGTGGCCTAAAGAGATATT+GGG - chr2_4:61467009-61467028 Msa0340170:CDS 40.0%
GGGAATGAGCGAAATCATTT+GGG + chr2_4:61467125-61467144 None:intergenic 40.0%
TGGGAATGAGCGAAATCATT+TGG + chr2_4:61467126-61467145 None:intergenic 40.0%
AGGTGGAGGGAAAGAAAAAA+TGG + chr2_4:61467271-61467290 None:intergenic 40.0%
!! TTTGGGTTTTTGAAGGTGGA+GGG + chr2_4:61467284-61467303 None:intergenic 40.0%
!!! TTTTGGGTTTTTGAAGGTGG+AGG + chr2_4:61467285-61467304 None:intergenic 40.0%
!!! CGCACTTTTTGGGTTTTTGA+AGG + chr2_4:61467291-61467310 None:intergenic 40.0%
CCTGACGATTTGCAATGATT+TGG + chr2_4:61467338-61467357 None:intergenic 40.0%
CCAAATCATTGCAAATCGTC+AGG - chr2_4:61467335-61467354 Msa0340170:CDS 40.0%
GGCAGAAAAACCAGGAAAAT+AGG + chr2_4:61467420-61467439 None:intergenic 40.0%
ACTGACAAAAATGACGTGAC+AGG + chr2_4:61467441-61467460 None:intergenic 40.0%
!!! GTCACGTCATTTTTGTCAGT+AGG - chr2_4:61467441-61467460 Msa0340170:CDS 40.0%
! CATTTTTGTCAGTAGGTGCT+AGG - chr2_4:61467448-61467467 Msa0340170:CDS 40.0%
TAACATACTTAGGGGCAGTT+TGG - chr2_4:61468233-61468252 Msa0340170:CDS 40.0%
!! GGCAGTTTGGTCTTTTACTT+TGG - chr2_4:61468246-61468265 Msa0340170:CDS 40.0%
TGGGAATGAGCAATACTGTT+TGG - chr2_4:61468266-61468285 Msa0340170:CDS 40.0%
GGGAATGAGCAATACTGTTT+GGG - chr2_4:61468267-61468286 Msa0340170:CDS 40.0%
ATACTGTTTGGGTAAAGAGC+AGG - chr2_4:61468278-61468297 Msa0340170:CDS 40.0%
TACTGTTTGGGTAAAGAGCA+GGG - chr2_4:61468279-61468298 Msa0340170:CDS 40.0%
AATACCTGGATGGTTGTTTG+TGG + chr2_4:61468522-61468541 None:intergenic 40.0%
CCATAATTGCACCTAAATGG+AGG + chr2_4:61468647-61468666 None:intergenic 40.0%
CCTCCATTTAGGTGCAATTA+TGG - chr2_4:61468644-61468663 Msa0340170:CDS 40.0%
TATGCAAAATCAGCAGGGTT+TGG - chr2_4:61468759-61468778 Msa0340170:intron 40.0%
ATTCTTTCGATGCCCTAGAT+CGG + chr2_4:61468806-61468825 None:intergenic 40.0%
!! TGCTTTACAACCGATTTTCG+GGG + chr2_4:61468904-61468923 None:intergenic 40.0%
CATGTGAAGAGAAAACAGGA+TGG - chr2_4:61468930-61468949 Msa0340170:CDS 40.0%
CGAAAAAAATGAGCTTGAGC+AGG + chr2_4:61469005-61469024 None:intergenic 40.0%
GTAATGATGTTCGGATGAGA+CGG - chr2_4:61469051-61469070 Msa0340170:intron 40.0%
ATCGTCAACAAGATAAAGGG+CGG - chr2_4:61469150-61469169 Msa0340170:intron 40.0%
! ATCGGCTTAGAAATGTGTTC+TGG - chr2_4:61469279-61469298 Msa0340170:intron 40.0%
TCGGCTTAGAAATGTGTTCT+GGG - chr2_4:61469280-61469299 Msa0340170:intron 40.0%
!! GTGTTCTGGGTTGATTCTAA+AGG - chr2_4:61469293-61469312 Msa0340170:intron 40.0%
! TCTAAAGGGTTGGAGGATTT+TGG - chr2_4:61469308-61469327 Msa0340170:intron 40.0%
!! ATACCGTTGGTGCTTTTTGT+TGG - chr2_4:61469386-61469405 Msa0340170:intron 40.0%
!! ACTCCAACAAAAAGCACCAA+CGG + chr2_4:61469392-61469411 None:intergenic 40.0%
! GCAATGTTGGTTGAACATGA+TGG + chr2_4:61469418-61469437 None:intergenic 40.0%
CATGTTCAACCAACATTGCT+TGG - chr2_4:61469419-61469438 Msa0340170:intron 40.0%
AATGCACATCCAAGCAATGT+TGG + chr2_4:61469431-61469450 None:intergenic 40.0%
! GCAAACATGGTTTGTAGCAA+TGG - chr2_4:61469490-61469509 Msa0340170:intron 40.0%
! AACATGGTTTGTAGCAATGG+GGG - chr2_4:61469493-61469512 Msa0340170:intron 40.0%
ACATGCACGATCATCATACA+AGG + chr2_4:61469789-61469808 None:intergenic 40.0%
TGTATGATGATCGTGCATGT+TGG - chr2_4:61469789-61469808 Msa0340170:intron 40.0%
GTATGATGATCGTGCATGTT+GGG - chr2_4:61469790-61469809 Msa0340170:intron 40.0%
!!! AGTTGTTTTTCGAAAGGGGA+AGG + chr2_4:61470025-61470044 None:intergenic 40.0%
!!! CAGCAGTTGTTTTTCGAAAG+GGG + chr2_4:61470029-61470048 None:intergenic 40.0%
TTCAAACAAGTGACAGGAAC+AGG + chr2_4:61470221-61470240 None:intergenic 40.0%
ATCATTTAATCTCCGGACCT+TGG + chr2_4:61470389-61470408 None:intergenic 40.0%
GCCATAATATTGGGTGAAGA+AGG - chr2_4:61470421-61470440 Msa0340170:intron 40.0%
TCGGAGACCTTATCATTAGA+TGG + chr2_4:61470595-61470614 None:intergenic 40.0%
TGTTGAAGGAAGTAAGGGAA+AGG - chr2_4:61470678-61470697 Msa0340170:intron 40.0%
ACAGAATGTAATGAAAGGGG+AGG + chr2_4:61470931-61470950 None:intergenic 40.0%
CCGACAGAATGTAATGAAAG+GGG + chr2_4:61470934-61470953 None:intergenic 40.0%
CCCCTTTCATTACATTCTGT+CGG - chr2_4:61470931-61470950 Msa0340170:intron 40.0%
! ACCTTTTCGTTTTCCCTTAC+TGG - chr2_4:61470992-61471011 Msa0340170:intron 40.0%
ACCAGTAAGGGAAAACGAAA+AGG + chr2_4:61470996-61471015 None:intergenic 40.0%
ATTGCAGGAGTTGGCAAAGA+TGG - chr2_4:61466440-61466459 Msa0340170:intron 45.0%
! CCTGTTGTGTATGCTTTGGA+AGG + chr2_4:61466491-61466510 None:intergenic 45.0%
CCTTCCAAAGCATACACAAC+AGG - chr2_4:61466488-61466507 Msa0340170:intron 45.0%
GAGGTTCACACTGATGAAGA+AGG - chr2_4:61466527-61466546 Msa0340170:intron 45.0%
GAAACAAGATGGCGCAAAAC+AGG - chr2_4:61466554-61466573 Msa0340170:intron 45.0%
ATGAACAAAGGAAGTGGCCA+TGG - chr2_4:61466821-61466840 Msa0340170:CDS 45.0%
AAGGAAGTGGCCATGGTAAT+TGG - chr2_4:61466828-61466847 Msa0340170:CDS 45.0%
ACACACCTGTGTTTAGCTAC+CGG - chr2_4:61466956-61466975 Msa0340170:CDS 45.0%
AGCTACCGGACGTCTTATAA+AGG - chr2_4:61466970-61466989 Msa0340170:CDS 45.0%
GGTGGCCTAAAGAGATATTG+GGG - chr2_4:61467010-61467029 Msa0340170:CDS 45.0%
GTGGCCTAAAGAGATATTGG+GGG - chr2_4:61467011-61467030 Msa0340170:CDS 45.0%
TGGCCTAAAGAGATATTGGG+GGG - chr2_4:61467012-61467031 Msa0340170:CDS 45.0%
AGACCCCCCAATATCTCTTT+AGG + chr2_4:61467018-61467037 None:intergenic 45.0%
TAAGTTGCGTAGGGGTAATC+TGG + chr2_4:61467159-61467178 None:intergenic 45.0%
! AGCGCATGTTAAGTTGCGTA+GGG + chr2_4:61467168-61467187 None:intergenic 45.0%
! TAGCGCATGTTAAGTTGCGT+AGG + chr2_4:61467169-61467188 None:intergenic 45.0%
GTTAACTCACGCTAGTTGTG+AGG - chr2_4:61467482-61467501 Msa0340170:CDS 45.0%
TGAGTAGACATTGAGTGGCA+TGG - chr2_4:61467670-61467689 Msa0340170:CDS 45.0%
!!! GCTTTGTTTTTGCCCGGTTT+GGG + chr2_4:61467725-61467744 None:intergenic 45.0%
!!! AGCTTTGTTTTTGCCCGGTT+TGG + chr2_4:61467726-61467745 None:intergenic 45.0%
AAAAACAAAGCTTCCGGCGT+AGG - chr2_4:61467734-61467753 Msa0340170:CDS 45.0%
TTAACTCACGCCAGTGCAAA+TGG - chr2_4:61468033-61468052 Msa0340170:CDS 45.0%
ACTACAAGGAGAAAGTGGCA+GGG + chr2_4:61468422-61468441 None:intergenic 45.0%
GAGACACTACAAGGAGAAAG+TGG + chr2_4:61468427-61468446 None:intergenic 45.0%
! AAACTCCGGTGATGTTTTCC+GGG + chr2_4:61468487-61468506 None:intergenic 45.0%
! CAAACTCCGGTGATGTTTTC+CGG + chr2_4:61468488-61468507 None:intergenic 45.0%
AGTTAAGTAGTCGCCGATCT+AGG - chr2_4:61468790-61468809 Msa0340170:intron 45.0%
GTTAAGTAGTCGCCGATCTA+GGG - chr2_4:61468791-61468810 Msa0340170:intron 45.0%
!! TTACAACCGATTTTCGGGGA+AGG + chr2_4:61468900-61468919 None:intergenic 45.0%
ACAAGATAAAGGGCGGAGTT+TGG - chr2_4:61469157-61469176 Msa0340170:intron 45.0%
!!! GCGGAGTTTGGTTTTAGAAC+CGG - chr2_4:61469169-61469188 Msa0340170:intron 45.0%
!!! CGGAGTTTGGTTTTAGAACC+GGG - chr2_4:61469170-61469189 Msa0340170:intron 45.0%
!!! GGAGTTTGGTTTTAGAACCG+GGG - chr2_4:61469171-61469190 Msa0340170:intron 45.0%
AGAAGCAATTGAGCATTCCC+CGG + chr2_4:61469191-61469210 None:intergenic 45.0%
!! CTGGGTTGATTCTAAAGGGT+TGG - chr2_4:61469298-61469317 Msa0340170:intron 45.0%
! GGTTGATTCTAAAGGGTTGG+AGG - chr2_4:61469301-61469320 Msa0340170:intron 45.0%
TTGTGTGGCTACTGCAAACA+TGG - chr2_4:61469477-61469496 Msa0340170:intron 45.0%
TGGTCAGTTAGAATCACCTG+CGG + chr2_4:61469527-61469546 None:intergenic 45.0%
!! TGAAAAGAGATGGTGGAAGC+TGG - chr2_4:61469724-61469743 Msa0340170:intron 45.0%
TTGGGTGCCAACGTTTATGA+AGG - chr2_4:61469808-61469827 Msa0340170:intron 45.0%
TAAACTTTCAAAGCGCGAGC+CGG + chr2_4:61469858-61469877 None:intergenic 45.0%
GGGGAAGGTGACTTTAATTC+AGG + chr2_4:61470010-61470029 None:intergenic 45.0%
! GGACAAACGTCGCTTTAAGT+AGG - chr2_4:61470329-61470348 Msa0340170:intron 45.0%
CTTGGAAGAGGTTCAATCCA+AGG - chr2_4:61470369-61470388 Msa0340170:intron 45.0%
AAGAGGTTCAATCCAAGGTC+CGG - chr2_4:61470374-61470393 Msa0340170:intron 45.0%
!! TTGCTTTAGAGCCTCGCTTA+AGG + chr2_4:61470485-61470504 None:intergenic 45.0%
GCAACCAATATGGGTAGCTA+AGG + chr2_4:61470542-61470561 None:intergenic 45.0%
ATACGAGTAAGAAGGCTGCA+AGG - chr2_4:61470626-61470645 Msa0340170:CDS 45.0%
TTACTTCCTTCAACACCTCC+TGG + chr2_4:61470673-61470692 None:intergenic 45.0%
!! AGGAGGTGTTGAAGGAAGTA+AGG - chr2_4:61470672-61470691 Msa0340170:intron 45.0%
!! GGAGGTGTTGAAGGAAGTAA+GGG - chr2_4:61470673-61470692 Msa0340170:intron 45.0%
GAAGGAAGTAAGGGAAAGGT+TGG - chr2_4:61470682-61470701 Msa0340170:intron 45.0%
GCAGTAAGTGGTAGTAACCA+TGG - chr2_4:61470798-61470817 Msa0340170:CDS 45.0%
CATGTTGTCTAGGCTGTGTC+TGG + chr2_4:61466760-61466779 None:intergenic 50.0%
CAGACACAGCCTAGACAACA+TGG - chr2_4:61466758-61466777 Msa0340170:CDS 50.0%
TGCCTTCGGTATGTACACAC+CGG - chr2_4:61466886-61466905 Msa0340170:CDS 50.0%
! GCGCATGTTAAGTTGCGTAG+GGG + chr2_4:61467167-61467186 None:intergenic 50.0%
ACGTGACAGGCAGAAAAACC+AGG + chr2_4:61467428-61467447 None:intergenic 50.0%
!! GTGCGCAAGTTAACTTGCGT+AGG - chr2_4:61467506-61467525 Msa0340170:CDS 50.0%
CAAAATCTGGGCAGCAGACT+GGG + chr2_4:61467572-61467591 None:intergenic 50.0%
TCAAAATCTGGGCAGCAGAC+TGG + chr2_4:61467573-61467592 None:intergenic 50.0%
GTAGACATTGAGTGGCATGG+TGG - chr2_4:61467673-61467692 Msa0340170:CDS 50.0%
!!! CCGGAAGCTTTGTTTTTGCC+CGG + chr2_4:61467731-61467750 None:intergenic 50.0%
CCGGGCAAAAACAAAGCTTC+CGG - chr2_4:61467728-61467747 Msa0340170:CDS 50.0%
! ACTCACGTTGCCATTTGCAC+TGG + chr2_4:61468046-61468065 None:intergenic 50.0%
CTGCGCATGTTAACATACGC+TGG + chr2_4:61468132-61468151 None:intergenic 50.0%
CATGTTAACATGCGCTGCGT+AGG + chr2_4:61468188-61468207 None:intergenic 50.0%
CTACAAGGAGAAAGTGGCAG+GGG + chr2_4:61468421-61468440 None:intergenic 50.0%
CACTACAAGGAGAAAGTGGC+AGG + chr2_4:61468423-61468442 None:intergenic 50.0%
CACTGATCTTCTCAACTCCC+CGG - chr2_4:61468466-61468485 Msa0340170:CDS 50.0%
AACTCCCCGGAAAACATCAC+CGG - chr2_4:61468479-61468498 Msa0340170:CDS 50.0%
! AACTCCGGTGATGTTTTCCG+GGG + chr2_4:61468486-61468505 None:intergenic 50.0%
! CATCACCGGAGTTTGTTCTC+CGG - chr2_4:61468493-61468512 Msa0340170:CDS 50.0%
ACCTGGATGGTTGTTTGTGG+CGG + chr2_4:61468519-61468538 None:intergenic 50.0%
ATGATGTTCGGATGAGACGG+AGG - chr2_4:61469054-61469073 Msa0340170:intron 50.0%
AGGAAGAATTCGACTGCAGG+TGG - chr2_4:61469074-61469093 Msa0340170:intron 50.0%
AAGAATTCGACTGCAGGTGG+TGG - chr2_4:61469077-61469096 Msa0340170:intron 50.0%
!! GATGGTGGAAGCTGGTTGAT+AGG - chr2_4:61469732-61469751 Msa0340170:intron 50.0%
!! TCTTTGGCTGGCTTGTCTAC+CGG - chr2_4:61469836-61469855 Msa0340170:intron 50.0%
!! GGCTTTAGGTTCCTTAAGCG+AGG - chr2_4:61470471-61470490 Msa0340170:intron 50.0%
GCAGCCTTAGCTACCCATAT+TGG - chr2_4:61470535-61470554 Msa0340170:intron 50.0%
AGTAAGAAGGCTGCAAGGAC+TGG - chr2_4:61470631-61470650 Msa0340170:CDS 50.0%
GTCATATAGGTGCCTCAGCT+TGG - chr2_4:61470774-61470793 Msa0340170:CDS 50.0%
CTCCGGTGTGTACATACCGA+AGG + chr2_4:61466891-61466910 None:intergenic 55.0%
CTTCGGTATGTACACACCGG+AGG - chr2_4:61466889-61466908 Msa0340170:CDS 55.0%
GACGTCCGGTAGCTAAACAC+AGG + chr2_4:61466964-61466983 None:intergenic 55.0%
! GAGTGGCATGGTGGAACATG+TGG - chr2_4:61467682-61467701 Msa0340170:CDS 55.0%
! CATGGTGGAACATGTGGCAG+AGG - chr2_4:61467688-61467707 Msa0340170:CDS 55.0%
GTGGAACATGTGGCAGAGGA+TGG - chr2_4:61467692-61467711 Msa0340170:CDS 55.0%
! ATTGGGTGGTTTGCCTACGC+CGG + chr2_4:61467750-61467769 None:intergenic 55.0%
!!! GTGGCAGGGGCTGCATTTTT+TGG + chr2_4:61468408-61468427 None:intergenic 55.0%
CGGGGAGTTGAGAAGATCAG+TGG + chr2_4:61468468-61468487 None:intergenic 55.0%
CGGAGGAAGAATTCGACTGC+AGG - chr2_4:61469071-61469090 Msa0340170:intron 55.0%
!!! GCTGTCGCTGCTGTTTTTCC+CGG - chr2_4:61469566-61469585 Msa0340170:CDS 55.0%
! CAAGGACTGGTGTAGCTGGT+AGG - chr2_4:61470644-61470663 Msa0340170:CDS 55.0%
!! AGGAGTCCAGGAGGTGTTGA+AGG - chr2_4:61470664-61470683 Msa0340170:intron 55.0%
CCACTTACTGCTCCAAGCTG+AGG + chr2_4:61470789-61470808 None:intergenic 55.0%
CCTCAGCTTGGAGCAGTAAG+TGG - chr2_4:61470786-61470805 Msa0340170:CDS 55.0%
! GGATGGCGTTGAGCCCAAAC+CGG - chr2_4:61467709-61467728 Msa0340170:CDS 60.0%
! GATGGCGTTGAGCCCAAACC+GGG - chr2_4:61467710-61467729 Msa0340170:CDS 60.0%
GGATGGTTGTTTGTGGCGGC+CGG + chr2_4:61468515-61468534 None:intergenic 60.0%
GCCGCCACAAACAACCATCC+AGG - chr2_4:61468515-61468534 Msa0340170:CDS 60.0%
!! CCGATTTTCGGGGAAGGACG+CGG + chr2_4:61468894-61468913 None:intergenic 60.0%
CCGCGTCCTTCCCCGAAAAT+CGG - chr2_4:61468891-61468910 Msa0340170:CDS 60.0%
! GCTGCAAGGACTGGTGTAGC+TGG - chr2_4:61470640-61470659 Msa0340170:CDS 60.0%
GGTGTAGCTGGTAGGAGTCC+AGG - chr2_4:61470652-61470671 Msa0340170:CDS 60.0%
GTAGCTGGTAGGAGTCCAGG+AGG - chr2_4:61470655-61470674 Msa0340170:CDS 60.0%
GGCGGCCGGAGAACAAACTC+CGG + chr2_4:61468501-61468520 None:intergenic 65.0%
AATGGGGGAACGTGCTCCGC+AGG - chr2_4:61469508-61469527 Msa0340170:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61466321 61471070 61466321 ID=Msa0340170;Name=Msa0340170
chr2_4 mRNA 61466321 61471070 61466321 ID=Msa0340170-mRNA-1;Parent=Msa0340170;Name=Msa0340170-mRNA-1;_AED=0.11;_eAED=0.13;_QI=0|0.14|0|0.5|1|1|8|0|898
chr2_4 exon 61471058 61471070 61471058 ID=Msa0340170-mRNA-1:exon:19337;Parent=Msa0340170-mRNA-1
chr2_4 exon 61470760 61470944 61470760 ID=Msa0340170-mRNA-1:exon:19336;Parent=Msa0340170-mRNA-1
chr2_4 exon 61470612 61470674 61470612 ID=Msa0340170-mRNA-1:exon:19335;Parent=Msa0340170-mRNA-1
chr2_4 exon 61469541 61469714 61469541 ID=Msa0340170-mRNA-1:exon:19334;Parent=Msa0340170-mRNA-1
chr2_4 exon 61468855 61468950 61468855 ID=Msa0340170-mRNA-1:exon:19333;Parent=Msa0340170-mRNA-1
chr2_4 exon 61466692 61468755 61466692 ID=Msa0340170-mRNA-1:exon:19332;Parent=Msa0340170-mRNA-1
chr2_4 exon 61466558 61466608 61466558 ID=Msa0340170-mRNA-1:exon:19331;Parent=Msa0340170-mRNA-1
chr2_4 exon 61466321 61466371 61466321 ID=Msa0340170-mRNA-1:exon:19330;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61471058 61471070 61471058 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61470760 61470944 61470760 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61470612 61470674 61470612 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61469541 61469714 61469541 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61468855 61468950 61468855 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61466692 61468755 61466692 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61466558 61466608 61466558 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
chr2_4 CDS 61466321 61466371 61466321 ID=Msa0340170-mRNA-1:cds;Parent=Msa0340170-mRNA-1
Gene Sequence

>Msa0340170

ATGAACTTAAAAAGAGTTGGCAAAGATGGTCAAATTCGTCACTTTTTTCATAGGCCTTCCAAAGCATACACAACAGGAACAAGGAAAAGAAGAGAGGTTCACACTGATGAAGAAGGAATTGAAACAAGATGGCGCAAAACAGGAAAAACTAGAGCTATTTTTTCCAATGGTGTTGTGAAGGGATTTAAGAAGATACTGAAGAAAGAGATGGAGAATTTGTTGCTTCAAAGATCTTCTACCAGACACAGCCTAGACAACATGACATTGAGTGGCATGGTGGAACATGTGGCAGAGGATGGCGTTGAGCCCAAACCGGGCAAAAACAAAGCTTCCGGCGTAGGCAAACCACCCAATGATGTGAAGTTTAAAGTGAAAATTCCTTTTCAAGTTGTAAAATTTGGACCGTTTGGATCGTTTATGTGTGATTATGTGATTTGTCTCAAACAACTTGATGTCTCACCACTGATCTTCTCAACTCCCCGGAAAACATCACCGGAGTTTGTTCTCCGGCCGCCACAAACAACCATCCAGTCATTATTCCTCCATTTAGGTGCAATTATGGATTCTTCTATTATTATGGCTAACACAATTCAAGACCCTAATAATGAAATGGAATTTGAATCACATGAAGCTGCATATTCATTTTACAAAGAGTATGCAAAATCAGCAGGGTTTGGTACTGCTAAGTTAAGTAGTCGCCGATCTAGGGCATCGAAAGAATTCATCGATGCGAAATTTTCATGTATTAGATATGGTAATAAACAACAATCGGATGACGCGATTAATCCGCGTCCTTCCCCGAAAATCGGTTGTAAAGCAAGTATGCATGTGAAGAGAAAACAGGATGGTAAATGGTATGTTTATAGTTTTGTTAAGGAGCATAATCACGAGCTTTTACCTGCTCAAGCTCATTTTTTTCGGAGTCATAGGAATAATGATACGTTGAGTAATGATGTTCGGATGAGACGGAGGAAGAATTCGACTGCAGGTGGTGGTAAGTTGTTTAGCGCGTATCAGAATATTGATTGTTTGGAGAATTTGATGAATCGTCAACAAGATAAAGGGCGGAGTTTGGTTTTAGAACCGGGGAATGCTCAATTGCTTCTTGAATTGTTTATGCATATGCAGGAAGAGAATCCGAAATTCTTTTATGCCATTGATTTGAATGAAGAGCATCGGCTTAGAAATGTGTTCTGGGTTGATTCTAAAGGGTTGGAGGATTTTGGTTATTTTTCTGATGTTGTTTCTTTTGACACAACGTATTTCACAAGCAAGTATAAGATACCGTTGGTGCTTTTTGTTGGAGTTAACCATCATGTTCAACCAACATTGCTTGGATGTGCATTGATAGCTGATGAGACTGTATTTACTTTTGTGTGGCTACTGCAAACATGGTTTGTAGCAATGGGGGAACGTGCTCCGCAGGTGATTCTAACTGACCAAAATGATGCTATTAAAGCTGCTGTCGCTGCTGTTTTTCCCGGAACACGTAATTGTTTTTGTTTGTGGCATGTTTTGGAAAAGATACCGAAACAGCTTGAGTTCTTAAGTACATGGCATGATAGCTTTATGGAAAAGTTCAACAAATGTATATATCAATCATGGACAGAGGAGCAATTTGAAAAGAGATGGTGGAAGCTGGTTGATAGGTTTAAACTTAGAGATGTTAAGTGGGTTCAAACCTTGTATGATGATCGTGCATGTTGGGTGCCAACGTTTATGAAGGATATTTCTTTGGCTGGCTTGTCTACCGGCTCGCGCTTTGAAAGTTTAAATTCTATTTTTGACAGATATATCCAAGTTGATACTTCATTAAGACAATTTATAGATCAGTACCAATTGATTCTTGAAGATAGAGATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTAAAGTCACCTTCCCCTTTCGAAAAACAACTGCTGTTAGTTTATACTCATGAAATCTATCAAAAGTTTCAGTTCGAGGTTTTGGGTGCTTCTGCTTGCCATCTAAAGAAAGAAAATGATGGCGTGATTACTACTTATGATGTGAAAGACTTCGAAAATAATCAGAACTACATGGTAGAATGGAACACATCAAACTCGGATATATCCTGTTCCTGTCACTTGTTTGAATATAAAGGTTACCTATGTAGACATGCAATTGTTGTTCTACAAATGTCTGGTGTTTTTAGCATCCCGCCAAAGTATATATTGAAAAGATGGACAAACGTCGCTTTAAGTAGGTATCCTATTGGTGAAAACTTGGAAGAGGTTCAATCCAAGGTCCGGAGATTAAATGATTTATGTAGACGAGCCATAATATTGGGTGAAGAAGGTTCTTTATCCCAAGAAAGTTACTACATGGCTTTAGGTTCCTTAAGCGAGGCTCTAAAGCAATGTACAAATTTGAACAACTCTGTTGAGAATGCAGCCTTAGCTACCCATATTGGTTGCAATGTTGAAGAAGAGTATCAATCTATTATACCATCTAATGATAAGGTCTCCGATCCGAAAATGAATACGAGTAAGAAGGCTGCAAGGACTGGTGTAGCTGGTAGGAGTCCAGGAGGTGTTGAAGGAAGTAAGGGAAAGGTGCCTCAGCTTGGAGCAGTAAGTGGTAGTAACCATGGCTTTCAACAAATGATTTTGGAGAAATTAAAACGCTTAGATATTTGGAGGACTTATAATGCTTAA

Protein sequence

>Msa0340170

MNLKRVGKDGQIRHFFHRPSKAYTTGTRKRREVHTDEEGIETRWRKTGKTRAIFSNGVVKGFKKILKKEMENLLLQRSSTRHSLDNMTLSGMVEHVAEDGVEPKPGKNKASGVGKPPNDVKFKVKIPFQVVKFGPFGSFMCDYVICLKQLDVSPLIFSTPRKTSPEFVLRPPQTTIQSLFLHLGAIMDSSIIMANTIQDPNNEMEFESHEAAYSFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRKQDGKWYVYSFVKEHNHELLPAQAHFFRSHRNNDTLSNDVRMRRRKNSTAGGGKLFSAYQNIDCLENLMNRQQDKGRSLVLEPGNAQLLLELFMHMQEENPKFFYAIDLNEEHRLRNVFWVDSKGLEDFGYFSDVVSFDTTYFTSKYKIPLVLFVGVNHHVQPTLLGCALIADETVFTFVWLLQTWFVAMGERAPQVILTDQNDAIKAAVAAVFPGTRNCFCLWHVLEKIPKQLEFLSTWHDSFMEKFNKCIYQSWTEEQFEKRWWKLVDRFKLRDVKWVQTLYDDRACWVPTFMKDISLAGLSTGSRFESLNSIFDRYIQVDTSLRQFIDQYQLILEDRDEEEAKANFDAWHETPELKSPSPFEKQLLLVYTHEIYQKFQFEVLGASACHLKKENDGVITTYDVKDFENNQNYMVEWNTSNSDISCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILKRWTNVALSRYPIGENLEEVQSKVRRLNDLCRRAIILGEEGSLSQESYYMALGSLSEALKQCTNLNNSVENAALATHIGCNVEEEYQSIIPSNDKVSDPKMNTSKKAARTGVAGRSPGGVEGSKGKVPQLGAVSGSNHGFQQMILEKLKRLDIWRTYNA*