AlfalfaGEDB | Msa1194030

M. sativa cultivar zhongmu-4 / Msa1194030

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1194030	XP_003628687.1	100.000	116	0	0	1	116	1	116	2.94e-75	228

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1194030	G7LFI4	100.000	116	0	0	1	116	1	116	1.40e-75	228

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004860	Msa1194030	0.800133	1.662825e-48	-8.615850e-47
Msa0004920	Msa1194030	0.821572	3.759213e-53	-8.615850e-47
Msa0008410	Msa1194030	0.812488	4.134218e-51	-8.615850e-47
Msa0015300	Msa1194030	0.825729	3.998848e-54	-8.615850e-47
Msa0030380	Msa1194030	0.802001	6.900947e-49	-8.615850e-47
Msa0057140	Msa1194030	0.809627	1.723071e-50	-8.615850e-47
Msa0064350	Msa1194030	0.809881	1.519892e-50	-8.615850e-47
Msa0071240	Msa1194030	0.815570	8.639652e-52	-8.615850e-47
Msa0076000	Msa1194030	0.835113	2.026783e-56	-8.615850e-47
Msa0081230	Msa1194030	0.800191	1.618451e-48	-8.615850e-47
Msa0084940	Msa1194030	0.824940	6.147190e-54	-8.615850e-47
Msa0092990	Msa1194030	0.827130	1.853745e-54	-8.615850e-47
Msa0094920	Msa1194030	0.805415	1.349697e-49	-8.615850e-47
Msa0119850	Msa1194030	0.804592	2.005850e-49	-8.615850e-47
Msa0608710	Msa1194030	0.810374	1.190090e-50	-8.615850e-47
Msa0619070	Msa1194030	0.829466	5.067259e-55	-8.615850e-47
Msa0623700	Msa1194030	0.815223	1.032249e-51	-8.615850e-47
Msa0638070	Msa1194030	0.820260	7.536639e-53	-8.615850e-47
Msa0638280	Msa1194030	0.812249	4.663308e-51	-8.615850e-47
Msa0638320	Msa1194030	0.825656	4.162743e-54	-8.615850e-47
Msa0639310	Msa1194030	0.804833	1.787021e-49	-8.615850e-47
Msa0647450	Msa1194030	-0.805899	1.068091e-49	-8.615850e-47
Msa0654760	Msa1194030	-0.808459	3.065882e-50	-8.615850e-47
Msa0661190	Msa1194030	-0.811104	8.273613e-51	-8.615850e-47
Msa0662650	Msa1194030	0.807246	5.551910e-50	-8.615850e-47
Msa0663900	Msa1194030	0.813269	2.788690e-51	-8.615850e-47
Msa0677270	Msa1194030	0.821465	3.980616e-53	-8.615850e-47
Msa0680240	Msa1194030	0.802810	4.700599e-49	-8.615850e-47
Msa0694840	Msa1194030	0.809441	1.889614e-50	-8.615850e-47
Msa0696130	Msa1194030	0.806531	7.861366e-50	-8.615850e-47
Msa0708860	Msa1194030	0.803244	3.823713e-49	-8.615850e-47
Msa0709500	Msa1194030	0.817753	2.800224e-52	-8.615850e-47
Msa0724830	Msa1194030	0.821667	3.574934e-53	-8.615850e-47
Msa0726830	Msa1194030	0.805961	1.036492e-49	-8.615850e-47
Msa0743740	Msa1194030	0.814029	1.897162e-51	-8.615850e-47
Msa0750430	Msa1194030	0.815852	7.474096e-52	-8.615850e-47
Msa0761940	Msa1194030	0.807874	4.083403e-50	-8.615850e-47
Msa0765380	Msa1194030	0.817272	3.594294e-52	-8.615850e-47
Msa0771720	Msa1194030	0.809042	2.301099e-50	-8.615850e-47
Msa0788710	Msa1194030	0.804666	1.935890e-49	-8.615850e-47
Msa0790390	Msa1194030	-0.813028	3.149691e-51	-8.615850e-47
Msa0790850	Msa1194030	0.814073	1.855096e-51	-8.615850e-47
Msa0795920	Msa1194030	0.806070	9.831005e-50	-8.615850e-47
Msa0831870	Msa1194030	0.822478	2.318362e-53	-8.615850e-47
Msa0147250	Msa1194030	0.821321	4.296870e-53	-8.615850e-47
Msa0157100	Msa1194030	0.805629	1.217114e-49	-8.615850e-47
Msa0162770	Msa1194030	-0.811573	6.544760e-51	-8.615850e-47
Msa0173740	Msa1194030	0.803968	2.705312e-49	-8.615850e-47
Msa0173820	Msa1194030	0.801352	9.376891e-49	-8.615850e-47
Msa0188630	Msa1194030	0.818804	1.618709e-52	-8.615850e-47
Msa0188680	Msa1194030	-0.811075	8.394214e-51	-8.615850e-47
Msa0191050	Msa1194030	0.827898	1.212895e-54	-8.615850e-47
Msa0199690	Msa1194030	0.804590	2.008518e-49	-8.615850e-47
Msa0205850	Msa1194030	0.819889	9.163490e-53	-8.615850e-47
Msa0233350	Msa1194030	0.835168	1.963534e-56	-8.615850e-47
Msa0233610	Msa1194030	0.802626	5.130296e-49	-8.615850e-47
Msa0372660	Msa1194030	0.819000	1.460841e-52	-8.615850e-47
Msa0372670	Msa1194030	0.817837	2.680886e-52	-8.615850e-47
Msa0373930	Msa1194030	0.801297	9.620724e-49	-8.615850e-47
Msa0379640	Msa1194030	0.802416	5.669525e-49	-8.615850e-47
Msa0393710	Msa1194030	0.813151	2.959504e-51	-8.615850e-47
Msa0398950	Msa1194030	0.806739	7.105203e-50	-8.615850e-47
Msa0399340	Msa1194030	0.811200	7.883664e-51	-8.615850e-47
Msa0402330	Msa1194030	0.806739	7.106668e-50	-8.615850e-47
Msa0416300	Msa1194030	0.805742	1.152460e-49	-8.615850e-47
Msa0426330	Msa1194030	0.817323	3.500860e-52	-8.615850e-47
Msa0439200	Msa1194030	0.805677	1.189185e-49	-8.615850e-47
Msa0449830	Msa1194030	0.805200	1.497434e-49	-8.615850e-47
Msa0477080	Msa1194030	0.807513	4.872685e-50	-8.615850e-47
Msa0479970	Msa1194030	0.801761	7.728654e-49	-8.615850e-47
Msa0999040	Msa1194030	0.817364	3.426139e-52	-8.615850e-47
Msa1012320	Msa1194030	0.820919	5.318469e-53	-8.615850e-47
Msa1012370	Msa1194030	0.807002	6.251152e-50	-8.615850e-47
Msa1014420	Msa1194030	0.801840	7.446219e-49	-8.615850e-47
Msa1039880	Msa1194030	0.827133	1.851171e-54	-8.615850e-47
Msa1040400	Msa1194030	0.800252	1.572286e-48	-8.615850e-47
Msa1040890	Msa1194030	0.808462	3.060190e-50	-8.615850e-47
Msa1046020	Msa1194030	0.806111	9.639530e-50	-8.615850e-47
Msa1063510	Msa1194030	0.819625	1.052602e-52	-8.615850e-47
Msa1072460	Msa1194030	-0.806884	6.622547e-50	-8.615850e-47
Msa1082700	Msa1194030	0.802716	4.916694e-49	-8.615850e-47
Msa1083210	Msa1194030	0.808003	3.833059e-50	-8.615850e-47
Msa1089840	Msa1194030	0.817317	3.511621e-52	-8.615850e-47
Msa0264930	Msa1194030	0.811917	5.508116e-51	-8.615850e-47
Msa0267310	Msa1194030	0.801438	9.002047e-49	-8.615850e-47
Msa0269450	Msa1194030	0.811836	5.735532e-51	-8.615850e-47
Msa0270220	Msa1194030	-0.820548	6.471644e-53	-8.615850e-47
Msa0282250	Msa1194030	0.833452	5.290675e-56	-8.615850e-47
Msa0291500	Msa1194030	0.808874	2.499172e-50	-8.615850e-47
Msa0304330	Msa1194030	0.801664	8.091410e-49	-8.615850e-47
Msa0307830	Msa1194030	-0.821448	4.015730e-53	-8.615850e-47
Msa0311700	Msa1194030	0.802842	4.630673e-49	-8.615850e-47
Msa0329350	Msa1194030	0.819712	1.005820e-52	-8.615850e-47
Msa0336420	Msa1194030	0.803615	3.203469e-49	-8.615850e-47
Msa0350990	Msa1194030	0.801815	7.535113e-49	-8.615850e-47
Msa0351810	Msa1194030	0.825101	5.633157e-54	-8.615850e-47
Msa0355270	Msa1194030	0.807485	4.939167e-50	-8.615850e-47
Msa1125760	Msa1194030	0.814842	1.254118e-51	-8.615850e-47
Msa1130210	Msa1194030	-0.804202	2.418722e-49	-8.615850e-47
Msa1170410	Msa1194030	0.801108	1.051721e-48	-8.615850e-47
Msa1171360	Msa1194030	0.815257	1.014402e-51	-8.615850e-47
Msa1178170	Msa1194030	0.804370	2.231541e-49	-8.615850e-47
Msa1194030	Msa1199560	0.825991	3.466139e-54	-8.615850e-47
Msa1194030	Msa1201560	0.811409	7.102424e-51	-8.615850e-47
Msa1194030	Msa1204250	0.809158	2.172781e-50	-8.615850e-47
Msa1194030	Msa1207270	0.816634	4.998236e-52	-8.615850e-47
Msa1194030	Msa1211890	0.803977	2.694828e-49	-8.615850e-47
Msa1194030	Msa1217660	0.803487	3.404906e-49	-8.615850e-47
Msa1194030	Msa1217810	0.812101	5.022735e-51	-8.615850e-47
Msa1194030	Msa1217830	0.834077	3.691483e-56	-8.615850e-47
Msa1194030	Msa1218600	0.808950	2.407031e-50	-8.615850e-47
Msa1194030	Msa1233500	0.811241	7.727053e-51	-8.615850e-47
Msa1194030	Msa1233890	0.815414	9.359768e-52	-8.615850e-47
Msa1194030	Msa1247250	0.811295	7.519945e-51	-8.615850e-47
Msa1194030	Msa1249240	0.916973	9.336911e-86	-8.615850e-47
Msa1194030	Msa1255040	-0.830054	3.644316e-55	-8.615850e-47
Msa1194030	Msa1267260	0.800332	1.514828e-48	-8.615850e-47
Msa1194030	Msa1269300	0.826665	2.394602e-54	-8.615850e-47
Msa1194030	Msa1283170	0.806300	8.794743e-50	-8.615850e-47
Msa1194030	Msa1294480	0.801042	1.085135e-48	-8.615850e-47
Msa1194030	Msa1295490	-0.807679	4.491960e-50	-8.615850e-47
Msa1194030	Msa1300870	0.805010	1.640484e-49	-8.615850e-47
Msa1194030	Msa1302190	-0.804159	2.468924e-49	-8.615850e-47
Msa1194030	Msa1304820	0.813692	2.250566e-51	-8.615850e-47
Msa1194030	Msa1306840	0.812418	4.282490e-51	-8.615850e-47
Msa1194030	Msa1315970	0.805767	1.138951e-49	-8.615850e-47
Msa1194030	Msa1316830	0.802968	4.361620e-49	-8.615850e-47
Msa1194030	Msa1328700	0.814668	1.370360e-51	-8.615850e-47
Msa1194030	Msa1333110	0.809912	1.496338e-50	-8.615850e-47
Msa1194030	Msa1340650	0.829349	5.409173e-55	-8.615850e-47
Msa1194030	Msa1356440	0.808881	2.490252e-50	-8.615850e-47
Msa1194030	Msa1385670	0.812599	3.909570e-51	-8.615850e-47
Msa1194030	Msa1397810	0.814124	1.807042e-51	-8.615850e-47
Msa1194030	Msa1403580	-0.820172	7.891703e-53	-8.615850e-47
Msa1194030	Msa1404730	0.824173	9.314643e-54	-8.615850e-47
Msa1194030	Msa1419800	-0.801890	7.272754e-49	-8.615850e-47
Msa1194030	Msa1425010	0.826044	3.366310e-54	-8.615850e-47
Msa1194030	Msa1426030	0.812267	4.619365e-51	-8.615850e-47
Msa1194030	Msa1440000	0.828901	6.948391e-55	-8.615850e-47
Msa1194030	Msa1443290	-0.818153	2.274625e-52	-8.615850e-47
Msa1194030	Msa1444740	0.816173	6.338032e-52	-8.615850e-47
Msa1194030	Msa1453780	-0.808651	2.788499e-50	-8.615850e-47
Msa1194030	Msa1461280	0.834646	2.658019e-56	-8.615850e-47
Msa1194030	Msa1466300	0.808304	3.307876e-50	-8.615850e-47
Msa0483860	Msa1194030	0.800097	1.691289e-48	-8.615850e-47
Msa0485120	Msa1194030	0.816597	5.094535e-52	-8.615850e-47
Msa0493630	Msa1194030	0.809330	1.996078e-50	-8.615850e-47
Msa0498650	Msa1194030	0.800566	1.357401e-48	-8.615850e-47
Msa0502100	Msa1194030	0.811139	8.129192e-51	-8.615850e-47
Msa0516320	Msa1194030	0.802566	5.279870e-49	-8.615850e-47
Msa0517110	Msa1194030	0.805412	1.351743e-49	-8.615850e-47
Msa0526890	Msa1194030	0.812338	4.458294e-51	-8.615850e-47
Msa0552810	Msa1194030	0.806500	7.983252e-50	-8.615850e-47
Msa0553220	Msa1194030	-0.813944	1.980340e-51	-8.615850e-47
Msa0556790	Msa1194030	0.800322	1.522007e-48	-8.615850e-47
Msa0558810	Msa1194030	0.808784	2.612044e-50	-8.615850e-47
Msa0568820	Msa1194030	0.827325	1.664859e-54	-8.615850e-47
Msa0577220	Msa1194030	0.811669	6.236091e-51	-8.615850e-47
Msa0577500	Msa1194030	0.812632	3.844877e-51	-8.615850e-47
Msa0597330	Msa1194030	0.801147	1.032633e-48	-8.615850e-47
Msa0599580	Msa1194030	0.803145	4.009566e-49	-8.615850e-47
Msa0842830	Msa1194030	0.807212	5.644204e-50	-8.615850e-47
Msa0850960	Msa1194030	0.800661	1.298012e-48	-8.615850e-47
Msa0869100	Msa1194030	0.808127	3.607792e-50	-8.615850e-47
Msa0876200	Msa1194030	0.816276	6.011172e-52	-8.615850e-47
Msa0877410	Msa1194030	0.814249	1.695730e-51	-8.615850e-47
Msa0899230	Msa1194030	0.806871	6.664597e-50	-8.615850e-47
Msa0933230	Msa1194030	0.802578	5.248358e-49	-8.615850e-47
Msa0933310	Msa1194030	0.808528	2.963165e-50	-8.615850e-47
Msa0967370	Msa1194030	0.811178	7.972018e-51	-8.615850e-47
Msa0968680	Msa1194030	0.804326	2.279321e-49	-8.615850e-47
Msa0970030	Msa1194030	0.809462	1.869870e-50	-8.615850e-47
Msa0971090	Msa1194030	0.810056	1.393422e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1194030	MtrunA17_Chr8g0364831	100.000	116	0	0	1	116	1	116	2.70e-79	228

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1194030	AT2G17350.1	91.379	116	10	0	1	116	1	116	3.12e-62	186

Find 46 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAAGAGAAAAGTGTCTTAA+TGG	0.248878	8_1:-41007751	Msa1194030:CDS
TCAGCAGGAACATTCCTCTT+TGG	0.261291	8_1:+41007580	None:intergenic
GAAATTTAATTCTTTAGTTT+TGG	0.267580	8_1:-41007504	Msa1194030:three_prime_UTR
GTTCATTCAAACTCAATAAC+AGG	0.268497	8_1:-41011709	Msa1194030:five_prime_UTR
CAGCAGGAACATTCCTCTTT+GGG	0.280949	8_1:+41007581	None:intergenic
CAACCTCGCGCTCACGTTCT+TGG	0.307172	8_1:+41011108	None:intergenic
AGCATTGGATGCTGATATTC+AGG	0.319410	8_1:-41011168	Msa1194030:CDS
TATGCTCTCATTGCTTGTTT+CGG	0.345123	8_1:+41011949	None:intergenic
AAAGAGAAAAGTGTCTTAAT+GGG	0.346020	8_1:-41007750	Msa1194030:CDS
CAAAAGTGTTAATACTTTCT+CGG	0.348318	8_1:-41007458	Msa1194030:three_prime_UTR
ACTTTGCTGGGATGACAAAA+AGG	0.366427	8_1:-41007632	Msa1194030:three_prime_UTR
GCGTGTGGCTTTGGTGTAAC+AGG	0.367149	8_1:-41012001	Msa1194030:five_prime_UTR
TCTCCATTTGCGTGTGGCTT+TGG	0.380888	8_1:-41012010	Msa1194030:five_prime_UTR
GCTCTTGAAATTACAGTTAG+TGG	0.391880	8_1:-41007696	Msa1194030:CDS
TAGGTATTGGAAGCGTATTT+AGG	0.400503	8_1:-41011798	Msa1194030:five_prime_UTR
AAGAGTAATTAACGTCGTTC+AGG	0.405322	8_1:-41011922	Msa1194030:intron
TTTCAAAGCGATTCCTCAGC+AGG	0.428730	8_1:+41007565	None:intergenic
TAATTTCAAGAGCTCCATCT+TGG	0.452477	8_1:+41007706	None:intergenic
TAAATTCGTTGAGGAGTTGA+AGG	0.486907	8_1:-41011192	Msa1194030:CDS
TCAAGAAGCAAGATTGAAGA+TGG	0.497021	8_1:-41007790	Msa1194030:CDS
TTGCTGAGCGTGAAGCTGCT+TGG	0.497901	8_1:-41011088	Msa1194030:CDS
ACACCAAAGCCACACGCAAA+TGG	0.506191	8_1:+41012007	None:intergenic
AGAGGTACATTAGTTGAGTT+AGG	0.509450	8_1:+41007540	None:intergenic
TGAGGAGTTGAAGGAAGCAT+TGG	0.523974	8_1:-41011183	Msa1194030:CDS
TGAGCGTGAAGCTGCTTGGA+AGG	0.525026	8_1:-41011084	Msa1194030:CDS
TCAAATCAAGATAACCAAGA+TGG	0.530922	8_1:-41007720	Msa1194030:CDS
TTTATGTAATTTGCAATCAG+TGG	0.533218	8_1:+41011761	None:intergenic
TACCTCACGACGAGAAAGAT+CGG	0.577719	8_1:+41011061	None:intergenic
AGAGATAATAATCAAAGCAA+AGG	0.581327	8_1:-41011683	Msa1194030:intron
CATCCAAGAACGTGAGCGCG+AGG	0.582285	8_1:-41011111	Msa1194030:CDS
AGCAGGAACATTCCTCTTTG+GGG	0.594886	8_1:+41007582	None:intergenic
GGCCGATCTTTCTCGTCGTG+AGG	0.603600	8_1:-41011063	Msa1194030:intron
ATTTCGATTCATGTTCCTAG+AGG	0.606804	8_1:+41007522	None:intergenic
GCAGGAACATTCCTCTTTGG+GGG	0.611157	8_1:+41007583	None:intergenic
AACTCAACTAATGTACCTCT+AGG	0.611731	8_1:-41007537	Msa1194030:three_prime_UTR
TGGATGCTGATATTCAGGAT+AGG	0.621862	8_1:-41011163	Msa1194030:CDS
AAAGAGGAATGTTCCTGCTG+AGG	0.625640	8_1:-41007578	Msa1194030:three_prime_UTR
TATTCAGGATAGGATCATGA+AGG	0.627768	8_1:-41011153	Msa1194030:CDS
GTTGATTCTCCATTTGCGTG+TGG	0.637230	8_1:-41012016	Msa1194030:five_prime_UTR
TCTGCGGATAAAAGCTGTGG+TGG	0.638704	8_1:-41011216	Msa1194030:CDS
AAGAGAAAAGTGTCTTAATG+GGG	0.648948	8_1:-41007749	Msa1194030:CDS
TATTGAGTTTGAATGAACGA+CGG	0.654450	8_1:+41011714	None:intergenic
TTCATTCAAACTCAATAACA+GGG	0.655878	8_1:-41011708	Msa1194030:five_prime_UTR
GTCTCTGCGGATAAAAGCTG+TGG	0.667580	8_1:-41011219	Msa1194030:CDS
TGTGGTGGATAAATTCGTTG+AGG	0.679452	8_1:-41011201	Msa1194030:CDS
TTTAGCTGAAGATGTCTCTG+CGG	0.737837	8_1:-41011232	Msa1194030:exon

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTATTATACAAATAAAATT+AGG	+	chr8_1:41008495-41008514	None:intergenic	10.0%
!!	AAAAAAAAAAATTTAGAAAC+TGG	+	chr8_1:41010155-41010174	None:intergenic	10.0%
!!!	TTAAAAAAAAATGAAACTTT+TGG	+	chr8_1:41010264-41010283	None:intergenic	10.0%
!!	AAATAAGTAATTATAGAAAA+TGG	-	chr8_1:41011201-41011220	Msa1194030:CDS	10.0%
!!!	ATGTAGTTTTCATAATAAAA+AGG	-	chr8_1:41008609-41008628	Msa1194030:intron	15.0%
!!	CAATACATATAATTTATTGA+TGG	+	chr8_1:41009014-41009033	None:intergenic	15.0%
!!!	ATTTGATTTTTGATAGAAAT+TGG	+	chr8_1:41009060-41009079	None:intergenic	15.0%
!!!	TCTTTTCAATTCAATTTATT+TGG	-	chr8_1:41009487-41009506	Msa1194030:intron	15.0%
!!!	TCTGTTATTTTTTATGATTT+CGG	+	chr8_1:41009783-41009802	None:intergenic	15.0%
!!	ATCATAAAAAATAACAGAAA+TGG	-	chr8_1:41009785-41009804	Msa1194030:intron	15.0%
!!	TCATAAAAAATAACAGAAAT+GGG	-	chr8_1:41009786-41009805	Msa1194030:intron	15.0%
!!!	TCATACTAAGTATTTTATAT+AGG	-	chr8_1:41010888-41010907	Msa1194030:intron	15.0%
!!!	GAAATTTAATTCTTTAGTTT+TGG	-	chr8_1:41011909-41011928	Msa1194030:intron	15.0%
!!	GGTAAGAAAGAAAAATAAAA+AGG	+	chr8_1:41007542-41007561	None:intergenic	20.0%
!!	AATTCGGTAATTTAAATTTG+TGG	+	chr8_1:41007563-41007582	None:intergenic	20.0%
!!!	TTTTTATTGCTTAGAAAGAA+AGG	-	chr8_1:41008101-41008120	Msa1194030:intron	20.0%
!!!	TTTTATTGCTTAGAAAGAAA+GGG	-	chr8_1:41008102-41008121	Msa1194030:intron	20.0%
!!!	AATGAATAATTGGATTCTTT+TGG	-	chr8_1:41008140-41008159	Msa1194030:intron	20.0%
!!	TCATAATAAAAAGGAATTCT+TGG	-	chr8_1:41008618-41008637	Msa1194030:intron	20.0%
!!	TCAGTATGAGTATAATAAAA+AGG	+	chr8_1:41008747-41008766	None:intergenic	20.0%
!!	TCTCTTAAACTAAAGAAAAT+GGG	+	chr8_1:41008784-41008803	None:intergenic	20.0%
!!	ATCTCTTAAACTAAAGAAAA+TGG	+	chr8_1:41008785-41008804	None:intergenic	20.0%
!!	TTGTGTAAATAAATTCTGTT+TGG	-	chr8_1:41009031-41009050	Msa1194030:intron	20.0%
!!!	ATTTTATGATAGAAATCGAA+GGG	+	chr8_1:41009090-41009109	None:intergenic	20.0%
!!!	TATTTTATGATAGAAATCGA+AGG	+	chr8_1:41009091-41009110	None:intergenic	20.0%
!!	CATAAAAAATAACAGAAATG+GGG	-	chr8_1:41009787-41009806	Msa1194030:intron	20.0%
!!!	TAAGACTTGATAGTATATTT+GGG	-	chr8_1:41009897-41009916	Msa1194030:intron	20.0%
!!!	TCATTTGGATAACTTTAAAA+TGG	-	chr8_1:41009978-41009997	Msa1194030:intron	20.0%
!!!	TTTAAAATGGTTAAAGTGAA+AGG	-	chr8_1:41009991-41010010	Msa1194030:intron	20.0%
!!	AAAAATTTAGAAACTGGAAT+GGG	+	chr8_1:41010149-41010168	None:intergenic	20.0%
!!	AAAAAATTTAGAAACTGGAA+TGG	+	chr8_1:41010150-41010169	None:intergenic	20.0%
!!!	TTTAATGATTTTGATCAAAC+TGG	-	chr8_1:41010279-41010298	Msa1194030:intron	20.0%
!!	AAGTGTTTCAAATTGTATAA+TGG	-	chr8_1:41010403-41010422	Msa1194030:intron	20.0%
!	GGAACTATGTAATTTGAATT+CGG	+	chr8_1:41007579-41007598	None:intergenic	25.0%
!!	TCCATTTCGTTTTCATAAAT+AGG	-	chr8_1:41007596-41007615	Msa1194030:three_prime_UTR	25.0%
!	ACCTATTTATGAAAACGAAA+TGG	+	chr8_1:41007600-41007619	None:intergenic	25.0%
!!	TCGTTTTCATAAATAGGTAT+TGG	-	chr8_1:41007602-41007621	Msa1194030:three_prime_UTR	25.0%
!!	TTTATGTAATTTGCAATCAG+TGG	+	chr8_1:41007655-41007674	None:intergenic	25.0%
!	TTCATTCAAACTCAATAACA+GGG	-	chr8_1:41007705-41007724	Msa1194030:CDS	25.0%
!	AGAGATAATAATCAAAGCAA+AGG	-	chr8_1:41007730-41007749	Msa1194030:CDS	25.0%
!	CTCGTAATGATAATACAATT+TGG	+	chr8_1:41007793-41007812	None:intergenic	25.0%
!!!	TGGTTTTGGAAATGAATAAT+TGG	-	chr8_1:41008130-41008149	Msa1194030:intron	25.0%
!!	GGATGAATATTTCAACATTT+TGG	-	chr8_1:41008532-41008551	Msa1194030:intron	25.0%
!!	CATTTTTGATGTATTTGAGA+TGG	-	chr8_1:41008661-41008680	Msa1194030:intron	25.0%
!	ATTCTACCATAGCTAATTAT+AGG	-	chr8_1:41008699-41008718	Msa1194030:intron	25.0%
!!	AATTTATTGATGGCAATTTC+TGG	+	chr8_1:41009004-41009023	None:intergenic	25.0%
!	TTTGGATATCTAATTTGAGT+GGG	+	chr8_1:41009155-41009174	None:intergenic	25.0%
!	ATCGAAGATAAAATTATACG+CGG	+	chr8_1:41009525-41009544	None:intergenic	25.0%
!!	TAATTTTATCTTCGATGTCA+CGG	-	chr8_1:41009529-41009548	Msa1194030:intron	25.0%
!	GATTGATCAAATAATTATCC+TGG	-	chr8_1:41009668-41009687	Msa1194030:intron	25.0%
!!	CTAAGACTTGATAGTATATT+TGG	-	chr8_1:41009896-41009915	Msa1194030:intron	25.0%
!	AAAGTTATCCAAATGATCAA+AGG	+	chr8_1:41009974-41009993	None:intergenic	25.0%
!	AAAATTTAGAAACTGGAATG+GGG	+	chr8_1:41010148-41010167	None:intergenic	25.0%
!	AGGTAAAAGAAATAGTTCAA+TGG	-	chr8_1:41010349-41010368	Msa1194030:intron	25.0%
!!	GGTCATTTCTAAATTCTTTT+TGG	-	chr8_1:41010370-41010389	Msa1194030:intron	25.0%
!!	TTTGCTATATTCATTATCAC+AGG	-	chr8_1:41010442-41010461	Msa1194030:intron	25.0%
!	TTGCTATATTCATTATCACA+GGG	-	chr8_1:41010443-41010462	Msa1194030:intron	25.0%
!	AACATTTCCGTTGTATATAT+TGG	-	chr8_1:41010531-41010550	Msa1194030:intron	25.0%
!	TGTGATGTATAGCTTATATT+TGG	-	chr8_1:41010644-41010663	Msa1194030:intron	25.0%
!!!	GTTGGACAATTTTTAATTTC+TGG	-	chr8_1:41010674-41010693	Msa1194030:intron	25.0%
!	CTTCTTTAGCTGAATATTTA+AGG	-	chr8_1:41010787-41010806	Msa1194030:intron	25.0%
!	ACTGTTAACCTCATATTAAT+CGG	+	chr8_1:41010817-41010836	None:intergenic	25.0%
!	AGTGGATAGAAAACAAATAA+GGG	+	chr8_1:41010976-41010995	None:intergenic	25.0%
!	AAGTGGATAGAAAACAAATA+AGG	+	chr8_1:41010977-41010996	None:intergenic	25.0%
!!!	TTATTTGTTTTCTATCCACT+TGG	-	chr8_1:41010976-41010995	Msa1194030:intron	25.0%
!	ATATATGATAAAACCCTTAC+TGG	-	chr8_1:41011060-41011079	Msa1194030:intron	25.0%
!	TATATGATAAAACCCTTACT+GGG	-	chr8_1:41011061-41011080	Msa1194030:intron	25.0%
!	TAATTAAGACCTTATATGCA+GGG	+	chr8_1:41011275-41011294	None:intergenic	25.0%
!!	GAATTGTTTTCTCTTTAGAT+TGG	-	chr8_1:41011388-41011407	Msa1194030:intron	25.0%
!	ATTGGAGAGTTATATTTACT+AGG	-	chr8_1:41011406-41011425	Msa1194030:intron	25.0%
!	TGCAAAATTGAAAAACAATG+AGG	+	chr8_1:41011588-41011607	None:intergenic	25.0%
!!!	TCATTGTTTTTCAATTTTGC+AGG	-	chr8_1:41011587-41011606	Msa1194030:intron	25.0%
!!!	AAAGAGAAAAGTGTCTTAAT+GGG	-	chr8_1:41011663-41011682	Msa1194030:intron	25.0%
!!!	ACTTTTTCTTTTGAAATCTG+AGG	+	chr8_1:41011758-41011777	None:intergenic	25.0%
!!!	CAAAAGTGTTAATACTTTCT+CGG	-	chr8_1:41011955-41011974	Msa1194030:five_prime_UTR	25.0%
	TATTGAGTTTGAATGAACGA+CGG	+	chr8_1:41007702-41007721	None:intergenic	30.0%
	GTTCATTCAAACTCAATAAC+AGG	-	chr8_1:41007704-41007723	Msa1194030:CDS	30.0%
!	AGGTATGTTTCTGTCTTATT+TGG	-	chr8_1:41007750-41007769	Msa1194030:CDS	30.0%
	TATGTATTCGTATTAGTGCT+AGG	+	chr8_1:41007820-41007839	None:intergenic	30.0%
!	GTTGTTTGGTTTAGAAAACA+AGG	-	chr8_1:41008037-41008056	Msa1194030:intron	30.0%
!!	CTTAGAAAGAAAGGGTATTA+TGG	-	chr8_1:41008110-41008129	Msa1194030:intron	30.0%
!!!	AAGAAAGGGTATTATGGTTT+TGG	-	chr8_1:41008116-41008135	Msa1194030:intron	30.0%
	AGAATTTGAATGAACCAAGT+AGG	+	chr8_1:41008378-41008397	None:intergenic	30.0%
!	TATCCTCTTTTCTACATAGA+TGG	-	chr8_1:41008437-41008456	Msa1194030:intron	30.0%
!	ATCCTCTTTTCTACATAGAT+GGG	-	chr8_1:41008438-41008457	Msa1194030:intron	30.0%
	AGAAAACCATAATCAACACA+TGG	+	chr8_1:41008580-41008599	None:intergenic	30.0%
	ACTTCACCTATAATTAGCTA+TGG	+	chr8_1:41008708-41008727	None:intergenic	30.0%
	TTTAAGAGATAGTCTACAAC+AGG	-	chr8_1:41008795-41008814	Msa1194030:intron	30.0%
	TTAAGAGATAGTCTACAACA+GGG	-	chr8_1:41008796-41008815	Msa1194030:intron	30.0%
	ATTGTTGGATGGAAATGAAA+TGG	-	chr8_1:41008848-41008867	Msa1194030:intron	30.0%
	GCTGTAAACACTATAAACAA+TGG	+	chr8_1:41008893-41008912	None:intergenic	30.0%
	TGTGTGTACTTTCAATATTC+TGG	-	chr8_1:41008965-41008984	Msa1194030:intron	30.0%
	TGTACTTTCAATATTCTGGT+TGG	-	chr8_1:41008969-41008988	Msa1194030:intron	30.0%
!	GTACTTTCAATATTCTGGTT+GGG	-	chr8_1:41008970-41008989	Msa1194030:intron	30.0%
	GTTTGGATATCTAATTTGAG+TGG	+	chr8_1:41009156-41009175	None:intergenic	30.0%
	GATATCCAAACATAGTTTAC+AGG	-	chr8_1:41009165-41009184	Msa1194030:intron	30.0%
	ACAATCAATAGCAAAGCTAA+GGG	+	chr8_1:41009289-41009308	None:intergenic	30.0%
	AACAATCAATAGCAAAGCTA+AGG	+	chr8_1:41009290-41009309	None:intergenic	30.0%
	ATTGTTTCCTGTTAGATGTA+GGG	-	chr8_1:41009304-41009323	Msa1194030:intron	30.0%
	AAAGAGAATTCCATTGTAGA+AGG	-	chr8_1:41009417-41009436	Msa1194030:intron	30.0%
	AAGAGAATTCCATTGTAGAA+GGG	-	chr8_1:41009418-41009437	Msa1194030:intron	30.0%
	CAAATTGTCCTATAACCTTA+GGG	+	chr8_1:41009597-41009616	None:intergenic	30.0%
	ACAAATTGTCCTATAACCTT+AGG	+	chr8_1:41009598-41009617	None:intergenic	30.0%
!	TCTACATCTGAAACTAAAGT+AGG	+	chr8_1:41009698-41009717	None:intergenic	30.0%
	TTCCTATAGTGCATGAATTA+TGG	-	chr8_1:41009738-41009757	Msa1194030:intron	30.0%
	AGTGAAAGGATAAAGCAATA+TGG	-	chr8_1:41010005-41010024	Msa1194030:intron	30.0%
	GTGAAAGGATAAAGCAATAT+GGG	-	chr8_1:41010006-41010025	Msa1194030:intron	30.0%
	GTAACTGATATTCATGTTGA+AGG	-	chr8_1:41010081-41010100	Msa1194030:intron	30.0%
!!	ATGATTTTGATCAAACTGGA+AGG	-	chr8_1:41010283-41010302	Msa1194030:intron	30.0%
	AATTGTATAATGGTGTCTGT+TGG	-	chr8_1:41010413-41010432	Msa1194030:intron	30.0%
	CATATAAGAAGAACTTGGTA+TGG	+	chr8_1:41010484-41010503	None:intergenic	30.0%
	CATACCAAGTTCTTCTTATA+TGG	-	chr8_1:41010482-41010501	Msa1194030:intron	30.0%
	ACCATGTCCAATATATACAA+CGG	+	chr8_1:41010541-41010560	None:intergenic	30.0%
	ACTGGTAACATCCAAAATAT+AGG	+	chr8_1:41010584-41010603	None:intergenic	30.0%
	CTTATATTTGGTCTAGATGT+TGG	-	chr8_1:41010656-41010675	Msa1194030:intron	30.0%
	ATACAATCATTTCCCAATCA+AGG	+	chr8_1:41010747-41010766	None:intergenic	30.0%
	TTAACCTCATATTAATCGGA+TGG	+	chr8_1:41010813-41010832	None:intergenic	30.0%
	TAGATATTGATGCAGTTTCA+AGG	-	chr8_1:41010847-41010866	Msa1194030:intron	30.0%
	ATATGATAAAACCCTTACTG+GGG	-	chr8_1:41011062-41011081	Msa1194030:intron	30.0%
	AACAAAATGCCCTTGAAATT+TGG	-	chr8_1:41011121-41011140	Msa1194030:CDS	30.0%
	TCTCTAACTCCAAATTTCAA+GGG	+	chr8_1:41011133-41011152	None:intergenic	30.0%
	ATCTCTAACTCCAAATTTCA+AGG	+	chr8_1:41011134-41011153	None:intergenic	30.0%
	GTAAAAGTTACATAGTGACA+TGG	-	chr8_1:41011226-41011245	Msa1194030:exon	30.0%
	CTAATTAAGACCTTATATGC+AGG	+	chr8_1:41011276-41011295	None:intergenic	30.0%
!!	GAAAGAGAAAAGTGTCTTAA+TGG	-	chr8_1:41011662-41011681	Msa1194030:intron	30.0%
!!	AAGAGAAAAGTGTCTTAATG+GGG	-	chr8_1:41011664-41011683	Msa1194030:intron	30.0%
	TCAAATCAAGATAACCAAGA+TGG	-	chr8_1:41011693-41011712	Msa1194030:five_prime_UTR	30.0%
	AAGAAAAAGTAAGACTTTGC+TGG	-	chr8_1:41011768-41011787	Msa1194030:five_prime_UTR	30.0%
	AGAAAAAGTAAGACTTTGCT+GGG	-	chr8_1:41011769-41011788	Msa1194030:five_prime_UTR	30.0%
	TATGCTCTCATTGCTTGTTT+CGG	+	chr8_1:41007467-41007486	None:intergenic	35.0%
	AAGAGTAATTAACGTCGTTC+AGG	-	chr8_1:41007491-41007510	Msa1194030:three_prime_UTR	35.0%
!!	TAGGTATTGGAAGCGTATTT+AGG	-	chr8_1:41007615-41007634	Msa1194030:three_prime_UTR	35.0%
	TTGAATGTAAGCACATGTGT+CGG	-	chr8_1:41007953-41007972	Msa1194030:intron	35.0%
!	ATCGAAGGTGTATTTGATGT+TGG	+	chr8_1:41007988-41008007	None:intergenic	35.0%
	GAAATTCCAATCACGTTGTT+TGG	-	chr8_1:41008023-41008042	Msa1194030:intron	35.0%
	TCTAAACCAAACAACGTGAT+TGG	+	chr8_1:41008032-41008051	None:intergenic	35.0%
!	GGATTCTTTTGGATGTAGTT+AGG	-	chr8_1:41008151-41008170	Msa1194030:intron	35.0%
!	TCTTTTGGATGTAGTTAGGT+TGG	-	chr8_1:41008155-41008174	Msa1194030:intron	35.0%
	TAAATTCGTTGAGGAGTTGA+AGG	-	chr8_1:41008221-41008240	Msa1194030:intron	35.0%
	TATTCAGGATAGGATCATGA+AGG	-	chr8_1:41008260-41008279	Msa1194030:intron	35.0%
	TTCCCATCTATGTAGAAAAG+AGG	+	chr8_1:41008443-41008462	None:intergenic	35.0%
!	TTTGCAGCATTTAGGGTTTA+GGG	+	chr8_1:41008469-41008488	None:intergenic	35.0%
!!	TTTTGCAGCATTTAGGGTTT+AGG	+	chr8_1:41008470-41008489	None:intergenic	35.0%
	TAACACATATTTGTCACTGC+TGG	-	chr8_1:41008511-41008530	Msa1194030:intron	35.0%
	AAACCATAATCAACACATGG+CGG	+	chr8_1:41008577-41008596	None:intergenic	35.0%
!!	AGGAATTCTTGGTAATGTAG+TGG	-	chr8_1:41008629-41008648	Msa1194030:intron	35.0%
	TACTCATACTGAGTAGATAC+TGG	-	chr8_1:41008755-41008774	Msa1194030:intron	35.0%
	TAAGAGATAGTCTACAACAG+GGG	-	chr8_1:41008797-41008816	Msa1194030:intron	35.0%
	CTAATTTGAGTGGGATGAAA+TGG	+	chr8_1:41009146-41009165	None:intergenic	35.0%
	CAATCAATAGCAAAGCTAAG+GGG	+	chr8_1:41009288-41009307	None:intergenic	35.0%
	GATTGTTTCCTGTTAGATGT+AGG	-	chr8_1:41009303-41009322	Msa1194030:intron	35.0%
!!!	CGAGAGTGTTTTGTATTACT+AGG	-	chr8_1:41009343-41009362	Msa1194030:intron	35.0%
	AGAGAATTCCATTGTAGAAG+GGG	-	chr8_1:41009419-41009438	Msa1194030:intron	35.0%
	GAAACTAAAGTAGGAAAACC+AGG	+	chr8_1:41009689-41009708	None:intergenic	35.0%
	AGCCATAATTCATGCACTAT+AGG	+	chr8_1:41009743-41009762	None:intergenic	35.0%
	TCTGACATCCTTTGATCATT+TGG	-	chr8_1:41009963-41009982	Msa1194030:intron	35.0%
!!!	TCTTTTTTTGCCTCACATTG+AGG	-	chr8_1:41010174-41010193	Msa1194030:intron	35.0%
	TGATCAAACTGGAAGGTAAA+AGG	-	chr8_1:41010290-41010309	Msa1194030:intron	35.0%
!!!	TCAGATCCTGTTTAGCTTTT+TGG	-	chr8_1:41010325-41010344	Msa1194030:intron	35.0%
!!!	ATCCTGTTTAGCTTTTTGGT+AGG	-	chr8_1:41010329-41010348	Msa1194030:intron	35.0%
	TACCTACCAAAAAGCTAAAC+AGG	+	chr8_1:41010334-41010353	None:intergenic	35.0%
	GTCTCCATATAAGAAGAACT+TGG	+	chr8_1:41010489-41010508	None:intergenic	35.0%
	TCCGTTGTATATATTGGACA+TGG	-	chr8_1:41010537-41010556	Msa1194030:intron	35.0%
	AATCATTTCCCAATCAAGGA+AGG	+	chr8_1:41010743-41010762	None:intergenic	35.0%
	AACAAATAAGGGAGAGTGAA+AGG	+	chr8_1:41010965-41010984	None:intergenic	35.0%
	AATAATCCAGATTCAAAGGC+TGG	+	chr8_1:41011252-41011271	None:intergenic	35.0%
	AGGGAATAATCCAGATTCAA+AGG	+	chr8_1:41011256-41011275	None:intergenic	35.0%
	TGGATTATTCCCTGCATATA+AGG	-	chr8_1:41011263-41011282	Msa1194030:intron	35.0%
	ATTACATGATGCAAAAGCAG+TGG	+	chr8_1:41011500-41011519	None:intergenic	35.0%
	TTGCATCATGTAATGATCTG+TGG	-	chr8_1:41011506-41011525	Msa1194030:intron	35.0%
	GTGGTATATTACTAGTGAAG+CGG	-	chr8_1:41011525-41011544	Msa1194030:intron	35.0%
	TCAAGAAGCAAGATTGAAGA+TGG	-	chr8_1:41011623-41011642	Msa1194030:intron	35.0%
	TAATTTCAAGAGCTCCATCT+TGG	+	chr8_1:41011710-41011729	None:intergenic	35.0%
	GCTCTTGAAATTACAGTTAG+TGG	-	chr8_1:41011717-41011736	Msa1194030:five_prime_UTR	35.0%
!!!	TCTTTTGAAATCTGAGGCAA+CGG	+	chr8_1:41011752-41011771	None:intergenic	35.0%
!	AGAGGTACATTAGTTGAGTT+AGG	+	chr8_1:41011876-41011895	None:intergenic	35.0%
	AACTCAACTAATGTACCTCT+AGG	-	chr8_1:41011876-41011895	Msa1194030:intron	35.0%
	ATTTCGATTCATGTTCCTAG+AGG	+	chr8_1:41011894-41011913	None:intergenic	35.0%
!!!	GATTTTTTCTGTGACGATGT+TGG	-	chr8_1:41011992-41012011	Msa1194030:five_prime_UTR	35.0%
	GTGTCAGTGTCAATTATCAC+TGG	+	chr8_1:41007881-41007900	None:intergenic	40.0%
	GGTGTATTTGATGTTGGACA+TGG	+	chr8_1:41007982-41008001	None:intergenic	40.0%
	ACACCTTCGATCAGAAAACA+AGG	-	chr8_1:41007997-41008016	Msa1194030:intron	40.0%
!!!	TCTCCTTGTTTTCTGATCGA+AGG	+	chr8_1:41008003-41008022	None:intergenic	40.0%
	TTTAGCTGAAGATGTCTCTG+CGG	-	chr8_1:41008181-41008200	Msa1194030:intron	40.0%
!!	TGTGGTGGATAAATTCGTTG+AGG	-	chr8_1:41008212-41008231	Msa1194030:intron	40.0%
!	AGCATTGGATGCTGATATTC+AGG	-	chr8_1:41008245-41008264	Msa1194030:intron	40.0%
	TGGATGCTGATATTCAGGAT+AGG	-	chr8_1:41008250-41008269	Msa1194030:intron	40.0%
!	TAGGGCTTTTGCAGCATTTA+GGG	+	chr8_1:41008476-41008495	None:intergenic	40.0%
!	TTAGGGCTTTTGCAGCATTT+AGG	+	chr8_1:41008477-41008496	None:intergenic	40.0%
	AACCATAATCAACACATGGC+GGG	+	chr8_1:41008576-41008595	None:intergenic	40.0%
	TCATTTCCATCCAACAATCC+AGG	+	chr8_1:41008846-41008865	None:intergenic	40.0%
	GGGTTCCTGTAAACTATGTT+TGG	+	chr8_1:41009173-41009192	None:intergenic	40.0%
	GAATGAGAACTCTCTTCCAA+GGG	+	chr8_1:41009448-41009467	None:intergenic	40.0%
	TGAATGAGAACTCTCTTCCA+AGG	+	chr8_1:41009449-41009468	None:intergenic	40.0%
	TCCTCAAAAGGCAAGCAAAT+TGG	+	chr8_1:41010036-41010055	None:intergenic	40.0%
	ATCATAGGACTCTCCTCAAA+AGG	+	chr8_1:41010048-41010067	None:intergenic	40.0%
	GAATATCAGTTACTGCGACA+TGG	+	chr8_1:41010074-41010093	None:intergenic	40.0%
	TTGAGAGACCAACACTCATA+CGG	-	chr8_1:41010109-41010128	Msa1194030:intron	40.0%
	CCTAACCAACACTTCTATTC+CGG	-	chr8_1:41010211-41010230	Msa1194030:intron	40.0%
!	TCTAACCGGAATAGAAGTGT+TGG	+	chr8_1:41010219-41010238	None:intergenic	40.0%
	GTGTTGCAGAAAAGTCTAAC+CGG	+	chr8_1:41010233-41010252	None:intergenic	40.0%
!	GTGTGTGGTGTCCTATATTT+TGG	-	chr8_1:41010570-41010589	Msa1194030:intron	40.0%
	GAGACTTGAACAAGAAACAC+TGG	+	chr8_1:41010602-41010621	None:intergenic	40.0%
	AAGGCCATCCGATTAATATG+AGG	-	chr8_1:41010806-41010825	Msa1194030:intron	40.0%
!!	TTCTATCCACTTGGTTTGTG+CGG	-	chr8_1:41010985-41011004	Msa1194030:intron	40.0%
	GAGACATATATGAAGGGTGA+AGG	+	chr8_1:41011304-41011323	None:intergenic	40.0%
	TCACCCTTCATATATGTCTC+TGG	-	chr8_1:41011304-41011323	Msa1194030:intron	40.0%
	CACCCTTCATATATGTCTCT+GGG	-	chr8_1:41011305-41011324	Msa1194030:intron	40.0%
	ACCCTTCATATATGTCTCTG+GGG	-	chr8_1:41011306-41011325	Msa1194030:intron	40.0%
	ACCCCAGAGACATATATGAA+GGG	+	chr8_1:41011310-41011329	None:intergenic	40.0%
	AACCCCAGAGACATATATGA+AGG	+	chr8_1:41011311-41011330	None:intergenic	40.0%
	ACTTTGCTGGGATGACAAAA+AGG	-	chr8_1:41011781-41011800	Msa1194030:five_prime_UTR	40.0%
!	GTTGATTCTCCATTTGCGTG+TGG	-	chr8_1:41007397-41007416	Msa1194030:three_prime_UTR	45.0%
!	TGAGGAGTTGAAGGAAGCAT+TGG	-	chr8_1:41008230-41008249	Msa1194030:intron	45.0%
	TACCTCACGACGAGAAAGAT+CGG	+	chr8_1:41008355-41008374	None:intergenic	45.0%
	CAACAATCCAGGCTTAGAAC+GGG	+	chr8_1:41008835-41008854	None:intergenic	45.0%
	CCAACAATCCAGGCTTAGAA+CGG	+	chr8_1:41008836-41008855	None:intergenic	45.0%
	TCTAAGCCTGGATTGTTGGA+TGG	-	chr8_1:41008837-41008856	Msa1194030:intron	45.0%
	AAATTGAAGGGGGGAAACAG+GGG	+	chr8_1:41008916-41008935	None:intergenic	45.0%
	CAAATTGAAGGGGGGAAACA+GGG	+	chr8_1:41008917-41008936	None:intergenic	45.0%
	TCCTCAGCCTCCAAATTGAA+GGG	+	chr8_1:41008928-41008947	None:intergenic	45.0%
	ATCCTCAGCCTCCAAATTGA+AGG	+	chr8_1:41008929-41008948	None:intergenic	45.0%
	ATAGTTTACAGGAACCCCAC+AGG	-	chr8_1:41009176-41009195	Msa1194030:intron	45.0%
	CAAATGGTAGCACTGTGAAC+AGG	+	chr8_1:41009256-41009275	None:intergenic	45.0%
	GTTCACAGTGCTACCATTTG+AGG	-	chr8_1:41009256-41009275	Msa1194030:intron	45.0%
	TAAGGGGTGAGATCCTCAAA+TGG	+	chr8_1:41009272-41009291	None:intergenic	45.0%
	TTCCTGTTAGATGTAGGGAC+AGG	-	chr8_1:41009309-41009328	Msa1194030:intron	45.0%
	AAGGGATTCCCCTTCTACAA+TGG	+	chr8_1:41009430-41009449	None:intergenic	45.0%
	ATTGTAGAAGGGGAATCCCT+TGG	-	chr8_1:41009429-41009448	Msa1194030:intron	45.0%
	ATCTTGTTCCTGTTGCCCTA+AGG	-	chr8_1:41009579-41009598	Msa1194030:intron	45.0%
	TCCTGTTGCCCTAAGGTTAT+AGG	-	chr8_1:41009586-41009605	Msa1194030:intron	45.0%
	TCCTATAACCTTAGGGCAAC+AGG	+	chr8_1:41009590-41009609	None:intergenic	45.0%
!!	GCCAATTTGCTTGCCTTTTG+AGG	-	chr8_1:41010032-41010051	Msa1194030:intron	45.0%
!!	TAGAAGTGTTGGTTAGGTGC+TGG	+	chr8_1:41010208-41010227	None:intergenic	45.0%
!!	CCGGAATAGAAGTGTTGGTT+AGG	+	chr8_1:41010214-41010233	None:intergenic	45.0%
!	AGACTTTTCTGCAACACGAC+TGG	-	chr8_1:41010236-41010255	Msa1194030:intron	45.0%
	AATATCCACACGACTCTCGA+TGG	-	chr8_1:41010932-41010951	Msa1194030:intron	45.0%
	TTAAACCATCGAGAGTCGTG+TGG	+	chr8_1:41010940-41010959	None:intergenic	45.0%
	TGATAAAACCCTTACTGGGG+TGG	-	chr8_1:41011065-41011084	Msa1194030:CDS	45.0%
	ACTTGCTTCACACACGTTCT+GGG	-	chr8_1:41011471-41011490	Msa1194030:intron	45.0%
!	AACATTCCTCTTTGGGGGAA+GGG	+	chr8_1:41011828-41011847	None:intergenic	45.0%
	AGCAGGAACATTCCTCTTTG+GGG	+	chr8_1:41011834-41011853	None:intergenic	45.0%
	CAGCAGGAACATTCCTCTTT+GGG	+	chr8_1:41011835-41011854	None:intergenic	45.0%
	TCAGCAGGAACATTCCTCTT+TGG	+	chr8_1:41011836-41011855	None:intergenic	45.0%
	AAAGAGGAATGTTCCTGCTG+AGG	-	chr8_1:41011835-41011854	Msa1194030:intron	45.0%
	TTTCAAAGCGATTCCTCAGC+AGG	+	chr8_1:41011851-41011870	None:intergenic	45.0%
!!	TTTCAAATTAAAATTATTAA+AGG	+	chr8_1:41007922-41007941	None:intergenic	5.0%
!!!	TTAATAATTTTAATTTGAAA+AGG	-	chr8_1:41007922-41007941	Msa1194030:intron	5.0%
!!!	ATTTTTAAATTAATATATTG+TGG	-	chr8_1:41008066-41008085	Msa1194030:intron	5.0%
!!	TTATTATACAAATAAAATTA+GGG	+	chr8_1:41008494-41008513	None:intergenic	5.0%
	TCTCCATTTGCGTGTGGCTT+TGG	-	chr8_1:41007403-41007422	Msa1194030:three_prime_UTR	50.0%
	ACACCAAAGCCACACGCAAA+TGG	+	chr8_1:41007409-41007428	None:intergenic	50.0%
	GTCTCTGCGGATAAAAGCTG+TGG	-	chr8_1:41008194-41008213	Msa1194030:intron	50.0%
	TCTGCGGATAAAAGCTGTGG+TGG	-	chr8_1:41008197-41008216	Msa1194030:intron	50.0%
!!	CACCCGCCATGTGTTGATTA+TGG	-	chr8_1:41008571-41008590	Msa1194030:intron	50.0%
!	TGTGAATCCCGTTCTAAGCC+TGG	-	chr8_1:41008825-41008844	Msa1194030:intron	50.0%
!	CCGTTCTAAGCCTGGATTGT+TGG	-	chr8_1:41008833-41008852	Msa1194030:intron	50.0%
	AATTGAAGGGGGGAAACAGG+GGG	+	chr8_1:41008915-41008934	None:intergenic	50.0%
	CCAAATTGAAGGGGGGAAAC+AGG	+	chr8_1:41008918-41008937	None:intergenic	50.0%
	CCTGTTTCCCCCCTTCAATT+TGG	-	chr8_1:41008915-41008934	Msa1194030:intron	50.0%
	GTTTCCCCCCTTCAATTTGG+AGG	-	chr8_1:41008918-41008937	Msa1194030:intron	50.0%
	TCAGCCTCCAAATTGAAGGG+GGG	+	chr8_1:41008925-41008944	None:intergenic	50.0%
	CTCAGCCTCCAAATTGAAGG+GGG	+	chr8_1:41008926-41008945	None:intergenic	50.0%
	CCTCAGCCTCCAAATTGAAG+GGG	+	chr8_1:41008927-41008946	None:intergenic	50.0%
	TCTCTTCCCATTGAGCCTGT+GGG	+	chr8_1:41009194-41009213	None:intergenic	50.0%
	ACAGGCTCAATGGGAAGAGA+GGG	-	chr8_1:41009194-41009213	Msa1194030:intron	50.0%
	TGCCTGTCCCTACATCTAAC+AGG	+	chr8_1:41009314-41009333	None:intergenic	50.0%
	ACTGCGACATGGCACATCAT+AGG	+	chr8_1:41010063-41010082	None:intergenic	50.0%
	AACGTGTGCCGTATGAGTGT+TGG	+	chr8_1:41010120-41010139	None:intergenic	50.0%
	CATGGTTGTGTGTGTGTGTG+TGG	-	chr8_1:41010555-41010574	Msa1194030:intron	50.0%
	TCCTGCTGACCTTCCTTGAT+TGG	-	chr8_1:41010731-41010750	Msa1194030:intron	50.0%
	CCTGCTGACCTTCCTTGATT+GGG	-	chr8_1:41010732-41010751	Msa1194030:intron	50.0%
	TAAAACCCTTACTGGGGTGG+TGG	-	chr8_1:41011068-41011087	Msa1194030:CDS	50.0%
	ACATGGCCAGCCTTTGAATC+TGG	-	chr8_1:41011243-41011262	Msa1194030:exon	50.0%
!!!	CTCTGGGGTTTTGTTGCAGT+TGG	-	chr8_1:41011321-41011340	Msa1194030:intron	50.0%
	CACTTGCTTCACACACGTTC+TGG	-	chr8_1:41011470-41011489	Msa1194030:intron	50.0%
	CTTGCTTCACACACGTTCTG+GGG	-	chr8_1:41011472-41011491	Msa1194030:intron	50.0%
!	GAACATTCCTCTTTGGGGGA+AGG	+	chr8_1:41011829-41011848	None:intergenic	50.0%
	GCAGGAACATTCCTCTTTGG+GGG	+	chr8_1:41011833-41011852	None:intergenic	50.0%
!!	GCGTGTGGCTTTGGTGTAAC+AGG	-	chr8_1:41007412-41007431	Msa1194030:three_prime_UTR	55.0%
	TTGCTGAGCGTGAAGCTGCT+TGG	-	chr8_1:41008325-41008344	Msa1194030:intron	55.0%
	TGAGCGTGAAGCTGCTTGGA+AGG	-	chr8_1:41008329-41008348	Msa1194030:intron	55.0%
!	CTCGTCGTGAGGTACCTACT+TGG	-	chr8_1:41008361-41008380	Msa1194030:intron	55.0%
	CCCCTTCAATTTGGAGGCTG+AGG	-	chr8_1:41008924-41008943	Msa1194030:intron	55.0%
	AGGAACCCCACAGGCTCAAT+GGG	-	chr8_1:41009185-41009204	Msa1194030:intron	55.0%
	CTCTTCCCATTGAGCCTGTG+GGG	+	chr8_1:41009193-41009212	None:intergenic	55.0%
	CTCTCTTCCCATTGAGCCTG+TGG	+	chr8_1:41009195-41009214	None:intergenic	55.0%
	CACAGGCTCAATGGGAAGAG+AGG	-	chr8_1:41009193-41009212	Msa1194030:intron	55.0%
	CAGGCTCAATGGGAAGAGAG+GGG	-	chr8_1:41009195-41009214	Msa1194030:intron	55.0%
	AGGCTCAATGGGAAGAGAGG+GGG	-	chr8_1:41009196-41009215	Msa1194030:intron	55.0%
	AAGAGAGGGGGGAGAGAACA+GGG	-	chr8_1:41009208-41009227	Msa1194030:intron	55.0%
	GGAGAGAACAGGGGTTAGGA+CGG	-	chr8_1:41009218-41009237	Msa1194030:intron	55.0%
	GGAGTCGTGTCCTCAATGTG+AGG	+	chr8_1:41010187-41010206	None:intergenic	55.0%
	CCCAATCAAGGAAGGTCAGC+AGG	+	chr8_1:41010735-41010754	None:intergenic	55.0%
	GAGACACCGCACAAACCAAG+TGG	+	chr8_1:41010994-41011013	None:intergenic	55.0%
	TTGAGCCACCACCCCAGTAA+GGG	+	chr8_1:41011076-41011095	None:intergenic	55.0%
!	ATTCCTCTTTGGGGGAAGGG+AGG	+	chr8_1:41011825-41011844	None:intergenic	55.0%
	CATCCAAGAACGTGAGCGCG+AGG	-	chr8_1:41008302-41008321	Msa1194030:intron	60.0%
	CAACCTCGCGCTCACGTTCT+TGG	+	chr8_1:41008308-41008327	None:intergenic	60.0%
	GGCCGATCTTTCTCGTCGTG+AGG	-	chr8_1:41008350-41008369	Msa1194030:intron	60.0%
	CAGGAACCCCACAGGCTCAA+TGG	-	chr8_1:41009184-41009203	Msa1194030:intron	60.0%
	GGCTCAATGGGAAGAGAGGG+GGG	-	chr8_1:41009197-41009216	Msa1194030:intron	60.0%
	GAAGAGAGGGGGGAGAGAAC+AGG	-	chr8_1:41009207-41009226	Msa1194030:intron	60.0%
	AGAGAGGGGGGAGAGAACAG+GGG	-	chr8_1:41009209-41009228	Msa1194030:intron	60.0%
	GTTGAGCCACCACCCCAGTA+AGG	+	chr8_1:41011077-41011096	None:intergenic	60.0%
	ACTCCTCCCTTCCCCCAAAG+AGG	-	chr8_1:41011819-41011838	Msa1194030:intron	60.0%
	GGGGGGAGAGAACAGGGGTT+AGG	-	chr8_1:41009214-41009233	Msa1194030:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_1	gene	41007384	41012051	41007384	ID=Msa1194030;Name=Msa1194030
chr8_1	mRNA	41007384	41012051	41007384	ID=Msa1194030-mRNA-1;Parent=Msa1194030;Name=Msa1194030-mRNA-1;_AED=0.04;_eAED=0.04;_QI=282\|1\|1\|1\|0.33\|0.25\|4\|272\|116
chr8_1	exon	41007384	41007826	41007384	ID=Msa1194030-mRNA-1:exon:13228;Parent=Msa1194030-mRNA-1
chr8_1	exon	41011064	41011262	41011064	ID=Msa1194030-mRNA-1:exon:13227;Parent=Msa1194030-mRNA-1
chr8_1	exon	41011684	41011817	41011684	ID=Msa1194030-mRNA-1:exon:13226;Parent=Msa1194030-mRNA-1
chr8_1	exon	41011923	41012051	41011923	ID=Msa1194030-mRNA-1:exon:13225;Parent=Msa1194030-mRNA-1
chr8_1	five_prime_UTR	41011923	41012051	41011923	ID=Msa1194030-mRNA-1:five_prime_utr;Parent=Msa1194030-mRNA-1
chr8_1	five_prime_UTR	41011684	41011817	41011684	ID=Msa1194030-mRNA-1:five_prime_utr;Parent=Msa1194030-mRNA-1
chr8_1	five_prime_UTR	41011244	41011262	41011244	ID=Msa1194030-mRNA-1:five_prime_utr;Parent=Msa1194030-mRNA-1
chr8_1	CDS	41011064	41011243	41011064	ID=Msa1194030-mRNA-1:cds;Parent=Msa1194030-mRNA-1
chr8_1	CDS	41007656	41007826	41007656	ID=Msa1194030-mRNA-1:cds;Parent=Msa1194030-mRNA-1
chr8_1	three_prime_UTR	41007384	41007655	41007384	ID=Msa1194030-mRNA-1:three_prime_utr;Parent=Msa1194030-mRNA-1

Gene Sequence	>Msa1194030 ATGTCTCTGCGGATAAAAGCTGTGGTGGATAAATTCGTTGAGGAGTTGAAGGAAGCATTGGATGCTGATATTCAGGATAGGATCATGAAGGACAGAGAGATGCAAAGTTACATCCAAGAACGTGAGCGCGAGGTTGCTGAGCGTGAAGCTGCTTGGAAGGCCGATCTTTCTCGTCGTGAGGCAGAGATTGTTCGTCAAGAAGCAAGATTGAAGATGGAGAGAGATAATCTTGAGAAAGAGAAAAGTGTCTTAATGGGGACTGCATCAAATCAAGATAACCAAGATGGAGCTCTTGAAATTACAGTTAGTGGTGAAAAATACCGTTGCCTCAGATTTCAAAAGAAAAAGTAA
Protein sequence	>Msa1194030 MSLRIKAVVDKFVEELKEALDADIQDRIMKDREMQSYIQEREREVAEREAAWKADLSRREAEIVRQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFQKKK*