Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770200 | sp|Q03958|PFD6_MOUSE | 45.528 | 123 | 65 | 1 | 9 | 129 | 5 | 127 | 1.06e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770200 | G7K0G0 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 2.35e-84 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0770200 | 0.827342 | 1.649345e-54 | -8.615850e-47 |
| Msa0004860 | Msa0770200 | 0.825497 | 4.540309e-54 | -8.615850e-47 |
| Msa0004920 | Msa0770200 | 0.808298 | 3.317486e-50 | -8.615850e-47 |
| Msa0004980 | Msa0770200 | 0.802925 | 4.452300e-49 | -8.615850e-47 |
| Msa0006290 | Msa0770200 | 0.802807 | 4.709009e-49 | -8.615850e-47 |
| Msa0032260 | Msa0770200 | 0.838191 | 3.330384e-57 | -8.615850e-47 |
| Msa0032580 | Msa0770200 | 0.805586 | 1.242680e-49 | -8.615850e-47 |
| Msa0033980 | Msa0770200 | 0.827235 | 1.749854e-54 | -8.615850e-47 |
| Msa0037160 | Msa0770200 | 0.800122 | 1.671196e-48 | -8.615850e-47 |
| Msa0040450 | Msa0770200 | 0.821926 | 3.113276e-53 | -8.615850e-47 |
| Msa0040690 | Msa0770200 | 0.821508 | 3.890669e-53 | -8.615850e-47 |
| Msa0043660 | Msa0770200 | 0.806061 | 9.875253e-50 | -8.615850e-47 |
| Msa0044540 | Msa0770200 | -0.804023 | 2.635649e-49 | -8.615850e-47 |
| Msa0051770 | Msa0770200 | 0.829277 | 5.632113e-55 | -8.615850e-47 |
| Msa0054440 | Msa0770200 | 0.810762 | 9.811055e-51 | -8.615850e-47 |
| Msa0057140 | Msa0770200 | 0.802275 | 6.060165e-49 | -8.615850e-47 |
| Msa0073480 | Msa0770200 | 0.837106 | 6.321536e-57 | -8.615850e-47 |
| Msa0076000 | Msa0770200 | 0.818353 | 2.049283e-52 | -8.615850e-47 |
| Msa0081930 | Msa0770200 | 0.823782 | 1.150927e-53 | -8.615850e-47 |
| Msa0085360 | Msa0770200 | -0.800330 | 1.516267e-48 | -8.615850e-47 |
| Msa0094120 | Msa0770200 | 0.836605 | 8.482564e-57 | -8.615850e-47 |
| Msa0094470 | Msa0770200 | 0.808933 | 2.427697e-50 | -8.615850e-47 |
| Msa0094920 | Msa0770200 | 0.824891 | 6.312953e-54 | -8.615850e-47 |
| Msa0094950 | Msa0770200 | 0.801330 | 9.472307e-49 | -8.615850e-47 |
| Msa0097990 | Msa0770200 | 0.830362 | 3.064754e-55 | -8.615850e-47 |
| Msa0100300 | Msa0770200 | 0.803436 | 3.490062e-49 | -8.615850e-47 |
| Msa0109690 | Msa0770200 | 0.801009 | 1.102138e-48 | -8.615850e-47 |
| Msa0603670 | Msa0770200 | 0.822534 | 2.250008e-53 | -8.615850e-47 |
| Msa0615440 | Msa0770200 | 0.807598 | 4.674933e-50 | -8.615850e-47 |
| Msa0619070 | Msa0770200 | 0.806730 | 7.137668e-50 | -8.615850e-47 |
| Msa0621490 | Msa0770200 | 0.814127 | 1.804264e-51 | -8.615850e-47 |
| Msa0623700 | Msa0770200 | 0.802201 | 6.277484e-49 | -8.615850e-47 |
| Msa0638070 | Msa0770200 | 0.805287 | 1.435469e-49 | -8.615850e-47 |
| Msa0643180 | Msa0770200 | 0.802736 | 4.868770e-49 | -8.615850e-47 |
| Msa0643220 | Msa0770200 | 0.839486 | 1.540059e-57 | -8.615850e-47 |
| Msa0643560 | Msa0770200 | 0.810705 | 1.009213e-50 | -8.615850e-47 |
| Msa0661190 | Msa0770200 | -0.810622 | 1.051862e-50 | -8.615850e-47 |
| Msa0675410 | Msa0770200 | 0.801279 | 9.706704e-49 | -8.615850e-47 |
| Msa0682900 | Msa0770200 | 0.856258 | 3.632767e-62 | -8.615850e-47 |
| Msa0688960 | Msa0770200 | 0.801061 | 1.075339e-48 | -8.615850e-47 |
| Msa0691900 | Msa0770200 | 0.839262 | 1.760246e-57 | -8.615850e-47 |
| Msa0694840 | Msa0770200 | 0.826809 | 2.212849e-54 | -8.615850e-47 |
| Msa0698060 | Msa0770200 | 0.813015 | 3.169973e-51 | -8.615850e-47 |
| Msa0698490 | Msa0770200 | 0.810825 | 9.507898e-51 | -8.615850e-47 |
| Msa0698660 | Msa0770200 | 0.814235 | 1.708645e-51 | -8.615850e-47 |
| Msa0703230 | Msa0770200 | 0.822213 | 2.670959e-53 | -8.615850e-47 |
| Msa0708520 | Msa0770200 | 0.819534 | 1.104162e-52 | -8.615850e-47 |
| Msa0709500 | Msa0770200 | 0.814764 | 1.304865e-51 | -8.615850e-47 |
| Msa0711780 | Msa0770200 | 0.819095 | 1.390534e-52 | -8.615850e-47 |
| Msa0715650 | Msa0770200 | 0.809735 | 1.633467e-50 | -8.615850e-47 |
| Msa0720820 | Msa0770200 | 0.827695 | 1.357524e-54 | -8.615850e-47 |
| Msa0724830 | Msa0770200 | 0.806272 | 8.916455e-50 | -8.615850e-47 |
| Msa0743260 | Msa0770200 | 0.802817 | 4.686492e-49 | -8.615850e-47 |
| Msa0744040 | Msa0770200 | 0.801403 | 9.155957e-49 | -8.615850e-47 |
| Msa0750430 | Msa0770200 | 0.815729 | 7.965030e-52 | -8.615850e-47 |
| Msa0750880 | Msa0770200 | 0.803959 | 2.717992e-49 | -8.615850e-47 |
| Msa0760380 | Msa0770200 | 0.815064 | 1.119169e-51 | -8.615850e-47 |
| Msa0770200 | Msa0784380 | 0.805892 | 1.071935e-49 | -8.615850e-47 |
| Msa0770200 | Msa0790850 | 0.821844 | 3.252531e-53 | -8.615850e-47 |
| Msa0770200 | Msa0791820 | 0.801617 | 8.274919e-49 | -8.615850e-47 |
| Msa0770200 | Msa0794670 | 0.831141 | 1.975460e-55 | -8.615850e-47 |
| Msa0770200 | Msa0796530 | 0.820347 | 7.198346e-53 | -8.615850e-47 |
| Msa0770200 | Msa0803890 | 0.804273 | 2.338214e-49 | -8.615850e-47 |
| Msa0770200 | Msa0808270 | 0.832529 | 8.973034e-56 | -8.615850e-47 |
| Msa0770200 | Msa0814320 | 0.802462 | 5.546199e-49 | -8.615850e-47 |
| Msa0770200 | Msa0816700 | 0.804594 | 2.004177e-49 | -8.615850e-47 |
| Msa0770200 | Msa0830540 | 0.811633 | 6.351536e-51 | -8.615850e-47 |
| Msa0770200 | Msa0841940 | 0.817340 | 3.469870e-52 | -8.615850e-47 |
| Msa0770200 | Msa0850960 | 0.829564 | 4.796704e-55 | -8.615850e-47 |
| Msa0770200 | Msa0876200 | 0.849435 | 3.240104e-60 | -8.615850e-47 |
| Msa0770200 | Msa0888580 | 0.812086 | 5.059508e-51 | -8.615850e-47 |
| Msa0770200 | Msa0902760 | 0.804712 | 1.894115e-49 | -8.615850e-47 |
| Msa0770200 | Msa0909000 | -0.801049 | 1.081422e-48 | -8.615850e-47 |
| Msa0770200 | Msa0935670 | 0.804569 | 2.028045e-49 | -8.615850e-47 |
| Msa0770200 | Msa0944190 | 0.832430 | 9.498744e-56 | -8.615850e-47 |
| Msa0770200 | Msa0968590 | 0.808611 | 2.844743e-50 | -8.615850e-47 |
| Msa0770200 | Msa0970030 | 0.831395 | 1.710877e-55 | -8.615850e-47 |
| Msa0770200 | Msa0970420 | 0.807941 | 3.952314e-50 | -8.615850e-47 |
| Msa0770200 | Msa0970570 | -0.805452 | 1.326190e-49 | -8.615850e-47 |
| Msa0770200 | Msa0989540 | 0.801006 | 1.103446e-48 | -8.615850e-47 |
| Msa0770200 | Msa1013400 | 0.808648 | 2.793170e-50 | -8.615850e-47 |
| Msa0770200 | Msa1014420 | 0.834991 | 2.175867e-56 | -8.615850e-47 |
| Msa0770200 | Msa1040890 | 0.807864 | 4.104718e-50 | -8.615850e-47 |
| Msa0770200 | Msa1041520 | 0.807635 | 4.591021e-50 | -8.615850e-47 |
| Msa0770200 | Msa1046020 | 0.837455 | 5.145634e-57 | -8.615850e-47 |
| Msa0770200 | Msa1046060 | 0.826020 | 3.411025e-54 | -8.615850e-47 |
| Msa0770200 | Msa1081150 | 0.833027 | 6.750504e-56 | -8.615850e-47 |
| Msa0770200 | Msa1081560 | 0.814739 | 1.321719e-51 | -8.615850e-47 |
| Msa0770200 | Msa1082500 | 0.808484 | 3.027746e-50 | -8.615850e-47 |
| Msa0770200 | Msa1084470 | 0.826007 | 3.435321e-54 | -8.615850e-47 |
| Msa0770200 | Msa1091100 | 0.816814 | 4.554875e-52 | -8.615850e-47 |
| Msa0770200 | Msa1093530 | 0.801841 | 7.442776e-49 | -8.615850e-47 |
| Msa0770200 | Msa1097800 | 0.803930 | 2.755776e-49 | -8.615850e-47 |
| Msa0770200 | Msa1104140 | 0.821469 | 3.972329e-53 | -8.615850e-47 |
| Msa0770200 | Msa1127830 | 0.820403 | 6.988447e-53 | -8.615850e-47 |
| Msa0770200 | Msa1127890 | 0.828015 | 1.137205e-54 | -8.615850e-47 |
| Msa0770200 | Msa1134090 | 0.827020 | 1.969491e-54 | -8.615850e-47 |
| Msa0770200 | Msa1165870 | 0.810302 | 1.233262e-50 | -8.615850e-47 |
| Msa0770200 | Msa1166410 | 0.811374 | 7.228618e-51 | -8.615850e-47 |
| Msa0770200 | Msa1166860 | 0.800791 | 1.221128e-48 | -8.615850e-47 |
| Msa0770200 | Msa1171360 | 0.813283 | 2.767978e-51 | -8.615850e-47 |
| Msa0770200 | Msa1171870 | 0.804083 | 2.560403e-49 | -8.615850e-47 |
| Msa0770200 | Msa1179950 | 0.806596 | 7.619310e-50 | -8.615850e-47 |
| Msa0770200 | Msa1187840 | 0.817947 | 2.531859e-52 | -8.615850e-47 |
| Msa0770200 | Msa1203250 | 0.812772 | 3.583742e-51 | -8.615850e-47 |
| Msa0770200 | Msa1209760 | 0.810929 | 9.024841e-51 | -8.615850e-47 |
| Msa0770200 | Msa1218600 | 0.827410 | 1.588950e-54 | -8.615850e-47 |
| Msa0770200 | Msa1237940 | 0.800512 | 1.391808e-48 | -8.615850e-47 |
| Msa0770200 | Msa1240180 | 0.825453 | 4.649391e-54 | -8.615850e-47 |
| Msa0770200 | Msa1240210 | 0.821404 | 4.110373e-53 | -8.615850e-47 |
| Msa0770200 | Msa1245940 | -0.802676 | 5.010732e-49 | -8.615850e-47 |
| Msa0770200 | Msa1295490 | -0.804845 | 1.776827e-49 | -8.615850e-47 |
| Msa0770200 | Msa1306430 | 0.809563 | 1.778355e-50 | -8.615850e-47 |
| Msa0770200 | Msa1316780 | 0.817154 | 3.819519e-52 | -8.615850e-47 |
| Msa0770200 | Msa1316830 | 0.821243 | 4.478602e-53 | -8.615850e-47 |
| Msa0770200 | Msa1320410 | 0.803866 | 2.840788e-49 | -8.615850e-47 |
| Msa0770200 | Msa1320620 | 0.823947 | 1.052567e-53 | -8.615850e-47 |
| Msa0770200 | Msa1333410 | 0.809832 | 1.556655e-50 | -8.615850e-47 |
| Msa0770200 | Msa1340260 | 0.804713 | 1.892464e-49 | -8.615850e-47 |
| Msa0770200 | Msa1343070 | 0.820865 | 5.472689e-53 | -8.615850e-47 |
| Msa0770200 | Msa1348560 | 0.813908 | 2.016535e-51 | -8.615850e-47 |
| Msa0770200 | Msa1353060 | 0.803879 | 2.823224e-49 | -8.615850e-47 |
| Msa0770200 | Msa1353980 | 0.805625 | 1.219871e-49 | -8.615850e-47 |
| Msa0770200 | Msa1356440 | 0.830857 | 2.319288e-55 | -8.615850e-47 |
| Msa0770200 | Msa1358250 | 0.802864 | 4.581518e-49 | -8.615850e-47 |
| Msa0770200 | Msa1359390 | 0.811923 | 5.491123e-51 | -8.615850e-47 |
| Msa0770200 | Msa1371430 | 0.820661 | 6.095790e-53 | -8.615850e-47 |
| Msa0770200 | Msa1374120 | 0.810223 | 1.282892e-50 | -8.615850e-47 |
| Msa0770200 | Msa1385670 | 0.805789 | 1.126630e-49 | -8.615850e-47 |
| Msa0770200 | Msa1391410 | 0.804642 | 1.958873e-49 | -8.615850e-47 |
| Msa0770200 | Msa1394290 | 0.821466 | 3.977098e-53 | -8.615850e-47 |
| Msa0770200 | Msa1397810 | 0.803731 | 3.031271e-49 | -8.615850e-47 |
| Msa0770200 | Msa1400190 | 0.815243 | 1.021573e-51 | -8.615850e-47 |
| Msa0770200 | Msa1404190 | 0.803945 | 2.736082e-49 | -8.615850e-47 |
| Msa0770200 | Msa1407460 | 0.812249 | 4.661756e-51 | -8.615850e-47 |
| Msa0770200 | Msa1415640 | 0.817789 | 2.748271e-52 | -8.615850e-47 |
| Msa0770200 | Msa1420990 | 0.807609 | 4.649086e-50 | -8.615850e-47 |
| Msa0770200 | Msa1423350 | 0.810085 | 1.373552e-50 | -8.615850e-47 |
| Msa0770200 | Msa1426030 | 0.801425 | 9.060502e-49 | -8.615850e-47 |
| Msa0770200 | Msa1432700 | 0.801985 | 6.954548e-49 | -8.615850e-47 |
| Msa0770200 | Msa1442700 | 0.820791 | 5.691030e-53 | -8.615850e-47 |
| Msa0770200 | Msa1444310 | 0.824970 | 6.048794e-54 | -8.615850e-47 |
| Msa0770200 | Msa1457920 | 0.814641 | 1.389010e-51 | -8.615850e-47 |
| Msa0770200 | Msa1466300 | 0.811686 | 6.184024e-51 | -8.615850e-47 |
| Msa0121590 | Msa0770200 | 0.832611 | 8.565192e-56 | -8.615850e-47 |
| Msa0124340 | Msa0770200 | 0.800824 | 1.202343e-48 | -8.615850e-47 |
| Msa0127310 | Msa0770200 | 0.836493 | 9.061770e-57 | -8.615850e-47 |
| Msa0128020 | Msa0770200 | 0.810602 | 1.062567e-50 | -8.615850e-47 |
| Msa0136070 | Msa0770200 | 0.823185 | 1.587085e-53 | -8.615850e-47 |
| Msa0136100 | Msa0770200 | 0.826615 | 2.461801e-54 | -8.615850e-47 |
| Msa0137550 | Msa0770200 | 0.809330 | 1.996315e-50 | -8.615850e-47 |
| Msa0141340 | Msa0770200 | 0.802859 | 4.593848e-49 | -8.615850e-47 |
| Msa0165950 | Msa0770200 | 0.806329 | 8.672072e-50 | -8.615850e-47 |
| Msa0172970 | Msa0770200 | 0.802104 | 6.570887e-49 | -8.615850e-47 |
| Msa0180020 | Msa0770200 | 0.800651 | 1.303910e-48 | -8.615850e-47 |
| Msa0184960 | Msa0770200 | 0.802157 | 6.410022e-49 | -8.615850e-47 |
| Msa0186890 | Msa0770200 | 0.819742 | 9.899374e-53 | -8.615850e-47 |
| Msa0187930 | Msa0770200 | 0.805883 | 1.076411e-49 | -8.615850e-47 |
| Msa0191050 | Msa0770200 | 0.800220 | 1.596200e-48 | -8.615850e-47 |
| Msa0193120 | Msa0770200 | 0.813884 | 2.041826e-51 | -8.615850e-47 |
| Msa0194540 | Msa0770200 | 0.817574 | 3.072583e-52 | -8.615850e-47 |
| Msa0195460 | Msa0770200 | 0.800454 | 1.430235e-48 | -8.615850e-47 |
| Msa0214710 | Msa0770200 | 0.822512 | 2.276333e-53 | -8.615850e-47 |
| Msa0222620 | Msa0770200 | 0.817591 | 3.045310e-52 | -8.615850e-47 |
| Msa0225740 | Msa0770200 | 0.837651 | 4.582753e-57 | -8.615850e-47 |
| Msa0226470 | Msa0770200 | 0.808830 | 2.553723e-50 | -8.615850e-47 |
| Msa0227400 | Msa0770200 | 0.838196 | 3.320584e-57 | -8.615850e-47 |
| Msa0231880 | Msa0770200 | 0.813916 | 2.009073e-51 | -8.615850e-47 |
| Msa0233350 | Msa0770200 | 0.810986 | 8.773348e-51 | -8.615850e-47 |
| Msa0372660 | Msa0770200 | 0.810040 | 1.404386e-50 | -8.615850e-47 |
| Msa0372670 | Msa0770200 | 0.822440 | 2.366627e-53 | -8.615850e-47 |
| Msa0383800 | Msa0770200 | 0.801342 | 9.422903e-49 | -8.615850e-47 |
| Msa0385580 | Msa0770200 | 0.843041 | 1.787838e-58 | -8.615850e-47 |
| Msa0402330 | Msa0770200 | 0.810808 | 9.585816e-51 | -8.615850e-47 |
| Msa0402650 | Msa0770200 | 0.800526 | 1.382720e-48 | -8.615850e-47 |
| Msa0419520 | Msa0770200 | 0.825667 | 4.136547e-54 | -8.615850e-47 |
| Msa0432770 | Msa0770200 | 0.811046 | 8.513610e-51 | -8.615850e-47 |
| Msa0447220 | Msa0770200 | 0.808687 | 2.740323e-50 | -8.615850e-47 |
| Msa0465550 | Msa0770200 | 0.833307 | 5.749600e-56 | -8.615850e-47 |
| Msa0465790 | Msa0770200 | 0.811294 | 7.524165e-51 | -8.615850e-47 |
| Msa0480000 | Msa0770200 | 0.816524 | 5.290454e-52 | -8.615850e-47 |
| Msa0239800 | Msa0770200 | 0.804537 | 2.059689e-49 | -8.615850e-47 |
| Msa0242230 | Msa0770200 | 0.806828 | 6.805358e-50 | -8.615850e-47 |
| Msa0242410 | Msa0770200 | 0.802848 | 4.618271e-49 | -8.615850e-47 |
| Msa0242680 | Msa0770200 | 0.802365 | 5.808480e-49 | -8.615850e-47 |
| Msa0244780 | Msa0770200 | 0.803344 | 3.645922e-49 | -8.615850e-47 |
| Msa0260210 | Msa0770200 | 0.820827 | 5.582746e-53 | -8.615850e-47 |
| Msa0260240 | Msa0770200 | 0.806268 | 8.931419e-50 | -8.615850e-47 |
| Msa0260280 | Msa0770200 | 0.805830 | 1.104538e-49 | -8.615850e-47 |
| Msa0260680 | Msa0770200 | 0.825781 | 3.887765e-54 | -8.615850e-47 |
| Msa0262310 | Msa0770200 | 0.829616 | 4.660597e-55 | -8.615850e-47 |
| Msa0265380 | Msa0770200 | 0.803785 | 2.953760e-49 | -8.615850e-47 |
| Msa0268130 | Msa0770200 | 0.813035 | 3.137721e-51 | -8.615850e-47 |
| Msa0280430 | Msa0770200 | 0.800003 | 1.766673e-48 | -8.615850e-47 |
| Msa0298700 | Msa0770200 | 0.805643 | 1.208759e-49 | -8.615850e-47 |
| Msa0298990 | Msa0770200 | 0.803568 | 3.275803e-49 | -8.615850e-47 |
| Msa0304260 | Msa0770200 | 0.803356 | 3.624343e-49 | -8.615850e-47 |
| Msa0304290 | Msa0770200 | 0.821622 | 3.660420e-53 | -8.615850e-47 |
| Msa0304330 | Msa0770200 | 0.824800 | 6.631817e-54 | -8.615850e-47 |
| Msa0305890 | Msa0770200 | 0.817886 | 2.612777e-52 | -8.615850e-47 |
| Msa0309770 | Msa0770200 | 0.821144 | 4.721030e-53 | -8.615850e-47 |
| Msa0311860 | Msa0770200 | 0.811689 | 6.173667e-51 | -8.615850e-47 |
| Msa0317250 | Msa0770200 | 0.804833 | 1.786403e-49 | -8.615850e-47 |
| Msa0318980 | Msa0770200 | 0.803868 | 2.838239e-49 | -8.615850e-47 |
| Msa0337650 | Msa0770200 | 0.822437 | 2.370536e-53 | -8.615850e-47 |
| Msa0340810 | Msa0770200 | 0.816542 | 5.241915e-52 | -8.615850e-47 |
| Msa0342360 | Msa0770200 | 0.806403 | 8.365765e-50 | -8.615850e-47 |
| Msa0347360 | Msa0770200 | 0.818179 | 2.243207e-52 | -8.615850e-47 |
| Msa0355270 | Msa0770200 | 0.808693 | 2.732409e-50 | -8.615850e-47 |
| Msa0484780 | Msa0770200 | 0.800709 | 1.268914e-48 | -8.615850e-47 |
| Msa0510350 | Msa0770200 | 0.809319 | 2.006684e-50 | -8.615850e-47 |
| Msa0541860 | Msa0770200 | 0.821944 | 3.084481e-53 | -8.615850e-47 |
| Msa0542160 | Msa0770200 | 0.801967 | 7.014208e-49 | -8.615850e-47 |
| Msa0547360 | Msa0770200 | 0.848230 | 6.998612e-60 | -8.615850e-47 |
| Msa0547720 | Msa0770200 | 0.807136 | 5.856875e-50 | -8.615850e-47 |
| Msa0556790 | Msa0770200 | 0.820206 | 7.752507e-53 | -8.615850e-47 |
| Msa0568820 | Msa0770200 | 0.803061 | 4.173048e-49 | -8.615850e-47 |
| Msa0578040 | Msa0770200 | 0.808094 | 3.666114e-50 | -8.615850e-47 |
| Msa0600600 | Msa0770200 | 0.807256 | 5.524561e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770200 | MtrunA17_Chr5g0423171 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 4.52e-88 | 251 |
| Msa0770200 | MtrunA17_Chr3g0104151 | 84.211 | 38 | 6 | 0 | 92 | 129 | 17 | 54 | 4.22e-13 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0770200 | AT1G29990.1 | 86.047 | 129 | 18 | 0 | 1 | 129 | 1 | 129 | 3.33e-77 | 224 |
Find 42 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCACAAATTCGATTTC+TGG | 0.151221 | 5_2:-40367965 | None:intergenic |
| ACTAGAGTGGTTTCTGTCTT+TGG | 0.221957 | 5_2:-40373586 | None:intergenic |
| ATCTTTCCACCATCTTTCTT+TGG | 0.229806 | 5_2:-40373558 | None:intergenic |
| TTAGCACTGTCTCATTATTA+TGG | 0.233713 | 5_2:+40373647 | Msa0770200:three_prime_UTR |
| TGATGCCACGGTTCAAGATT+TGG | 0.316433 | 5_2:+40372437 | Msa0770200:CDS |
| TGTACTTGTTAAGCAAGATT+TGG | 0.330090 | 5_2:+40368731 | Msa0770200:CDS |
| GTCTCTAATCCTATATTTCA+AGG | 0.340704 | 5_2:-40373687 | None:intergenic |
| ACAAAAGATGCAATCTCTTC+AGG | 0.356299 | 5_2:+40373421 | Msa0770200:CDS |
| TCTCTGATACCTTGAAATAT+AGG | 0.361520 | 5_2:+40373678 | Msa0770200:three_prime_UTR |
| CGAAAATGAGCTCGTTCTTA+AGG | 0.364571 | 5_2:+40368227 | Msa0770200:CDS |
| TAGAGATCTTCAACGCGAAT+TGG | 0.368259 | 5_2:+40368033 | Msa0770200:CDS |
| GCAAATGTTTACAAGTTGAT+TGG | 0.380956 | 5_2:+40368705 | Msa0770200:CDS |
| CGATCTCAACAAGCTTCAAA+AGG | 0.400711 | 5_2:+40368069 | Msa0770200:CDS |
| CAAACAGACAAACTTGTAGA+TGG | 0.420768 | 5_2:+40373615 | Msa0770200:three_prime_UTR |
| AAGATGCAATCTCTTCAGGC+TGG | 0.480196 | 5_2:+40373425 | Msa0770200:CDS |
| TCTCTTGCGGACATTTGCAT+TGG | 0.483042 | 5_2:-40368760 | None:intergenic |
| ACTGTAACTTGACCGTTCAT+AGG | 0.485267 | 5_2:+40373486 | Msa0770200:three_prime_UTR |
| CAATCTCTTCAGGCTGGGAA+AGG | 0.495242 | 5_2:+40373431 | Msa0770200:CDS |
| AATCTCTTCAGGCTGGGAAA+GGG | 0.515494 | 5_2:+40373432 | Msa0770200:CDS |
| AAATCTTGCTTAACAAGTAC+AGG | 0.520028 | 5_2:-40368729 | None:intergenic |
| AAATGTATTCAATTCTCTTG+CGG | 0.528071 | 5_2:-40368773 | None:intergenic |
| GATCTCAACAAGCTTCAAAA+GGG | 0.534109 | 5_2:+40368070 | Msa0770200:CDS |
| TTTGGCATCAAAAGTCACAT+TGG | 0.541954 | 5_2:-40373540 | None:intergenic |
| TTCGATTTCTGGCACACTGA+GGG | 0.542358 | 5_2:-40367954 | None:intergenic |
| GCAGAATAGCAAGAAAGAAA+CGG | 0.544496 | 5_2:+40372467 | Msa0770200:CDS |
| CTCTTCCAAATCTTGAACCG+TGG | 0.545459 | 5_2:-40372442 | None:intergenic |
| TTACAGTAAACAAACAATCA+AGG | 0.551424 | 5_2:-40373470 | None:intergenic |
| CTGTTTGAGCAAAACTAGAG+TGG | 0.565158 | 5_2:-40373599 | None:intergenic |
| AGATGCAATCTCTTCAGGCT+GGG | 0.569375 | 5_2:+40373426 | Msa0770200:CDS |
| CAGGAAGCGTCTTGATGCCA+CGG | 0.578703 | 5_2:+40372425 | Msa0770200:intron |
| TGTTAAGCAAGATTTGGCTG+AGG | 0.593363 | 5_2:+40368737 | Msa0770200:CDS |
| GCGTTGAAGATCTCTAATGT+TGG | 0.594934 | 5_2:-40368026 | None:intergenic |
| AATCGAATTTGTGAAAGCAA+AGG | 0.600362 | 5_2:+40367970 | Msa0770200:five_prime_UTR |
| AAGAAGTACACTATTCAACT+TGG | 0.603063 | 5_2:+40368204 | Msa0770200:CDS |
| TTGATGCCAAAGAAAGATGG+TGG | 0.604241 | 5_2:+40373552 | Msa0770200:three_prime_UTR |
| GTGAAAGCAAAGGAAGGAGG+AGG | 0.627755 | 5_2:+40367980 | Msa0770200:five_prime_UTR |
| TCTTCAGGCTGGGAAAGGGA+AGG | 0.633958 | 5_2:+40373436 | Msa0770200:CDS |
| GAATTTGTGAAAGCAAAGGA+AGG | 0.649479 | 5_2:+40367974 | Msa0770200:five_prime_UTR |
| GTAACTTGACCGTTCATAGG+TGG | 0.669511 | 5_2:+40373489 | Msa0770200:three_prime_UTR |
| TTTGTGAAAGCAAAGGAAGG+AGG | 0.670673 | 5_2:+40367977 | Msa0770200:five_prime_UTR |
| ACTCATTCACCACCTATGAA+CGG | 0.679282 | 5_2:-40373498 | None:intergenic |
| ATTCGATTTCTGGCACACTG+AGG | 0.682370 | 5_2:-40367955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTCTTTCAAT+AGG | + | chr5_2:40368659-40368678 | Msa0770200:intron | 10.0% |
| !! | TAATTTATTCATAGATAAAA+GGG | + | chr5_2:40369151-40369170 | Msa0770200:intron | 10.0% |
| !!! | AATAAAATTCTAAAACAAAA+TGG | - | chr5_2:40371212-40371231 | None:intergenic | 10.0% |
| !!! | CAAACTTTTTTTTTAAATCT+CGG | - | chr5_2:40368425-40368444 | None:intergenic | 15.0% |
| !!! | GTTATTTATTTTCTTGATTT+TGG | + | chr5_2:40368822-40368841 | Msa0770200:intron | 15.0% |
| !! | AAATAATCACTTCAAAATAT+TGG | + | chr5_2:40369035-40369054 | Msa0770200:intron | 15.0% |
| !!! | CTATTTTTTCGTTATTATTT+TGG | + | chr5_2:40369116-40369135 | Msa0770200:intron | 15.0% |
| !! | GTAATTTATTCATAGATAAA+AGG | + | chr5_2:40369150-40369169 | Msa0770200:intron | 15.0% |
| !! | TAAAATTATGTATTAGCAAA+AGG | + | chr5_2:40369728-40369747 | Msa0770200:intron | 15.0% |
| !! | ATAAGATAATATGATGAATA+TGG | + | chr5_2:40370034-40370053 | Msa0770200:intron | 15.0% |
| !!! | ATTTTGTATTCTAAAATATC+AGG | + | chr5_2:40371641-40371660 | Msa0770200:intron | 15.0% |
| !!! | TTTTGTATTCTAAAATATCA+GGG | + | chr5_2:40371642-40371661 | Msa0770200:intron | 15.0% |
| !! | TTTGTAAGTTAGTAATTAAT+TGG | + | chr5_2:40372024-40372043 | Msa0770200:intron | 15.0% |
| !! | TTGTAAGTTAGTAATTAATT+GGG | + | chr5_2:40372025-40372044 | Msa0770200:intron | 15.0% |
| !! | TATGTGTGTTATAATAAATA+AGG | + | chr5_2:40372186-40372205 | Msa0770200:intron | 15.0% |
| !! | AATAATTACAGAATAACATT+TGG | + | chr5_2:40372545-40372564 | Msa0770200:intron | 15.0% |
| !!! | ATTCTAAAATGACATAATTT+GGG | - | chr5_2:40373066-40373085 | None:intergenic | 15.0% |
| !!! | TATTCTAAAATGACATAATT+TGG | - | chr5_2:40373067-40373086 | None:intergenic | 15.0% |
| !!! | TTAAAAAGTATATTCTATCT+TGG | + | chr5_2:40373206-40373225 | Msa0770200:intron | 15.0% |
| !!! | TGTATTTAATTTTTCTTAAG+AGG | + | chr5_2:40373236-40373255 | Msa0770200:intron | 15.0% |
| !! | AAACCCTAAAATACATAAAA+GGG | - | chr5_2:40368255-40368274 | None:intergenic | 20.0% |
| !! | AAAACCCTAAAATACATAAA+AGG | - | chr5_2:40368256-40368275 | None:intergenic | 20.0% |
| !!! | TTAGTTTGATAACTAGAATT+AGG | + | chr5_2:40368496-40368515 | Msa0770200:intron | 20.0% |
| !!! | TGGTAATTTTTGATACATTT+AGG | + | chr5_2:40368538-40368557 | Msa0770200:intron | 20.0% |
| !!! | ATTTATTTTCTTGATTTTGG+AGG | + | chr5_2:40368825-40368844 | Msa0770200:intron | 20.0% |
| !!! | ACGAAACAGATAATTTTTTT+AGG | - | chr5_2:40368875-40368894 | None:intergenic | 20.0% |
| !!! | TATTATTTTGGATGAAGAAT+AGG | + | chr5_2:40369128-40369147 | Msa0770200:intron | 20.0% |
| !! | AAAATGGAAATAAACTCTTT+AGG | - | chr5_2:40369233-40369252 | None:intergenic | 20.0% |
| !!! | TTAGAGAAATATGTTGTTTA+AGG | + | chr5_2:40369366-40369385 | Msa0770200:intron | 20.0% |
| !! | TACAAAAATAAGGATGAAAA+TGG | + | chr5_2:40369481-40369500 | Msa0770200:intron | 20.0% |
| !! | TTGTAGTAGATAAATAACTT+TGG | + | chr5_2:40369830-40369849 | Msa0770200:intron | 20.0% |
| !!! | GAATAGTGGTATATTAATTT+TGG | + | chr5_2:40370060-40370079 | Msa0770200:intron | 20.0% |
| !! | TAGTTAAGTATGTTTATAAG+AGG | - | chr5_2:40370427-40370446 | None:intergenic | 20.0% |
| !! | TTATAAACATACTTAACTAG+TGG | + | chr5_2:40370428-40370447 | Msa0770200:intron | 20.0% |
| !! | TAACATAACAAAAAATAGCA+AGG | + | chr5_2:40370620-40370639 | Msa0770200:intron | 20.0% |
| !!! | TGATTAAACATTTTAAGAAG+TGG | + | chr5_2:40371015-40371034 | Msa0770200:intron | 20.0% |
| !!! | TTTGTATTTCAAGTTCTTAT+TGG | + | chr5_2:40371150-40371169 | Msa0770200:intron | 20.0% |
| !! | ATAATACATATTGTTCGATA+TGG | + | chr5_2:40371182-40371201 | Msa0770200:intron | 20.0% |
| !! | ATGTTTAATTACATCAGTAT+TGG | + | chr5_2:40371611-40371630 | Msa0770200:intron | 20.0% |
| !!! | ATGTAACATTTTTTACTTAG+CGG | - | chr5_2:40371929-40371948 | None:intergenic | 20.0% |
| !! | GTAATTAATTGGGAAATTAA+AGG | + | chr5_2:40372035-40372054 | Msa0770200:intron | 20.0% |
| !! | AAATTAAAGGAAAGATATGT+TGG | + | chr5_2:40372048-40372067 | Msa0770200:intron | 20.0% |
| !!! | GACTTTTAAATTATTTCTCA+TGG | + | chr5_2:40372520-40372539 | Msa0770200:intron | 20.0% |
| !! | AAAAAGATGAACGATTTTGA+AGG | - | chr5_2:40368146-40368165 | None:intergenic | 25.0% |
| !! | GTACCCTTTTATGTATTTTA+GGG | + | chr5_2:40368249-40368268 | Msa0770200:intron | 25.0% |
| !! | TTGATTTTCGAATGTGTATT+CGG | + | chr5_2:40368469-40368488 | Msa0770200:intron | 25.0% |
| ! | TAGAATTAGGATACAAACTA+AGG | + | chr5_2:40368509-40368528 | Msa0770200:intron | 25.0% |
| !!! | TTTTTTCTTTCAATAGGAGT+TGG | + | chr5_2:40368665-40368684 | Msa0770200:intron | 25.0% |
| ! | AAATGTATTCAATTCTCTTG+CGG | - | chr5_2:40368776-40368795 | None:intergenic | 25.0% |
| ! | AGTATATGATTTGATTCATC+TGG | + | chr5_2:40368919-40368938 | Msa0770200:intron | 25.0% |
| ! | TTGATTAAAAAGTAACCACT+TGG | + | chr5_2:40368977-40368996 | Msa0770200:intron | 25.0% |
| ! | AATTCATTGTTTGTAAGTAC+AGG | - | chr5_2:40369195-40369214 | None:intergenic | 25.0% |
| ! | AACAATGAATTTGACTATCT+TGG | + | chr5_2:40369204-40369223 | Msa0770200:intron | 25.0% |
| ! | AAAAACTAGTTCATCGTTAT+AGG | - | chr5_2:40369266-40369285 | None:intergenic | 25.0% |
| ! | ATCAACAAAAATCAAGTCTA+TGG | - | chr5_2:40369323-40369342 | None:intergenic | 25.0% |
| !! | AGAAATATGTTGTTTAAGGA+TGG | + | chr5_2:40369370-40369389 | Msa0770200:intron | 25.0% |
| !! | GAAATATGTTGTTTAAGGAT+GGG | + | chr5_2:40369371-40369390 | Msa0770200:intron | 25.0% |
| !!! | TCATCCTTATTTTTGTACAA+TGG | - | chr5_2:40369478-40369497 | None:intergenic | 25.0% |
| ! | TTTATCTACTACAATCTACA+AGG | - | chr5_2:40369824-40369843 | None:intergenic | 25.0% |
| ! | GATAATATGATGAATATGGA+TGG | + | chr5_2:40370038-40370057 | Msa0770200:intron | 25.0% |
| ! | TAAGTATGTTTATAAGAGGA+GGG | - | chr5_2:40370423-40370442 | None:intergenic | 25.0% |
| ! | TTAAGTATGTTTATAAGAGG+AGG | - | chr5_2:40370424-40370443 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTTCTTCTCTAT+AGG | - | chr5_2:40370705-40370724 | None:intergenic | 25.0% |
| !! | AGAATCATTTGGTTAGTTAT+AGG | - | chr5_2:40370729-40370748 | None:intergenic | 25.0% |
| ! | GAAATACAAAGAGAGTAAAT+TGG | - | chr5_2:40371140-40371159 | None:intergenic | 25.0% |
| ! | TACCTAAATGTATTTATCTC+AGG | + | chr5_2:40371239-40371258 | Msa0770200:intron | 25.0% |
| ! | ATCCTGAGATAAATACATTT+AGG | - | chr5_2:40371244-40371263 | None:intergenic | 25.0% |
| !!! | ACATGAAAGTGTTGAAATTT+GGG | - | chr5_2:40371595-40371614 | None:intergenic | 25.0% |
| !!! | AACATGAAAGTGTTGAAATT+TGG | - | chr5_2:40371596-40371615 | None:intergenic | 25.0% |
| ! | ATAAAACAGTATCACAATGA+GGG | - | chr5_2:40371887-40371906 | None:intergenic | 25.0% |
| ! | AATAAAACAGTATCACAATG+AGG | - | chr5_2:40371888-40371907 | None:intergenic | 25.0% |
| ! | AAGATTAGATACACTTCTAA+CGG | + | chr5_2:40372277-40372296 | Msa0770200:intron | 25.0% |
| !! | CTTCATTTTAGATCTTGTTA+TGG | + | chr5_2:40372319-40372338 | Msa0770200:intron | 25.0% |
| ! | ATCATCATCATCATCATATA+TGG | + | chr5_2:40372391-40372410 | Msa0770200:intron | 25.0% |
| ! | TTCGTTGAGATACAAATAAA+CGG | - | chr5_2:40373126-40373145 | None:intergenic | 25.0% |
| ! | TTACAGTAAACAAACAATCA+AGG | - | chr5_2:40373473-40373492 | None:intergenic | 25.0% |
| AATCGAATTTGTGAAAGCAA+AGG | + | chr5_2:40367970-40367989 | Msa0770200:five_prime_UTR | 30.0% | |
| !! | TGAACGATTTTGAAGGAATT+TGG | - | chr5_2:40368139-40368158 | None:intergenic | 30.0% |
| ! | AAGAAGTACACTATTCAACT+TGG | + | chr5_2:40368204-40368223 | Msa0770200:CDS | 30.0% |
| ! | GGTACCCTTTTATGTATTTT+AGG | + | chr5_2:40368248-40368267 | Msa0770200:intron | 30.0% |
| !! | TTTTACCAAGCTTGTTCTTA+AGG | + | chr5_2:40368292-40368311 | Msa0770200:intron | 30.0% |
| ! | CAAAAACCAAACCATCATTT+TGG | - | chr5_2:40368601-40368620 | None:intergenic | 30.0% |
| ! | CTAAGTTTCACTGATTGTTA+TGG | + | chr5_2:40368621-40368640 | Msa0770200:intron | 30.0% |
| !! | GCAAATGTTTACAAGTTGAT+TGG | + | chr5_2:40368705-40368724 | Msa0770200:CDS | 30.0% |
| AAATCTTGCTTAACAAGTAC+AGG | - | chr5_2:40368732-40368751 | None:intergenic | 30.0% | |
| ! | TGTACTTGTTAAGCAAGATT+TGG | + | chr5_2:40368731-40368750 | Msa0770200:CDS | 30.0% |
| AACCACTTGGAATGTTTATT+AGG | + | chr5_2:40368990-40369009 | Msa0770200:intron | 30.0% | |
| ACCACTTGGAATGTTTATTA+GGG | + | chr5_2:40368991-40369010 | Msa0770200:intron | 30.0% | |
| TATAGGCTGCAAGAAAAAAA+TGG | - | chr5_2:40369249-40369268 | None:intergenic | 30.0% | |
| GCTTCCATTGTACAAAAATA+AGG | + | chr5_2:40369471-40369490 | Msa0770200:intron | 30.0% | |
| TACATTTGATGAGCTTACAA+TGG | - | chr5_2:40369562-40369581 | None:intergenic | 30.0% | |
| ! | ATTAGCAAAAGGTGTATGTT+AGG | + | chr5_2:40369739-40369758 | Msa0770200:intron | 30.0% |
| AGCAGACGATTAAACTTTAT+CGG | + | chr5_2:40369776-40369795 | Msa0770200:intron | 30.0% | |
| ! | ATAACTTTGGCTAGTTAGTT+TGG | + | chr5_2:40369843-40369862 | Msa0770200:intron | 30.0% |
| TGTCTAATCACATGCATTTA+CGG | - | chr5_2:40369915-40369934 | None:intergenic | 30.0% | |
| CAATTGAAAATGGAAAGAAC+AGG | - | chr5_2:40369977-40369996 | None:intergenic | 30.0% | |
| CATGGCTATACAATTGAAAA+TGG | - | chr5_2:40369987-40370006 | None:intergenic | 30.0% | |
| AATAATCTCCTTGGAGAAAA+TGG | + | chr5_2:40370109-40370128 | Msa0770200:intron | 30.0% | |
| ! | ATAGTTTTCCATTTTCTCCA+AGG | - | chr5_2:40370120-40370139 | None:intergenic | 30.0% |
| AAGTATGTTTATAAGAGGAG+GGG | - | chr5_2:40370422-40370441 | None:intergenic | 30.0% | |
| AGGTATCTTGAAGAATCATT+TGG | - | chr5_2:40370740-40370759 | None:intergenic | 30.0% | |
| AGAGGAGAACTCTAATATAA+GGG | - | chr5_2:40370781-40370800 | None:intergenic | 30.0% | |
| TTTGAAAACCTTCCACATAT+TGG | + | chr5_2:40370865-40370884 | Msa0770200:intron | 30.0% | |
| TTGAAAACCTTCCACATATT+GGG | + | chr5_2:40370866-40370885 | Msa0770200:intron | 30.0% | |
| !! | TTTTAAGAAGTGGAGAGTTT+AGG | + | chr5_2:40371025-40371044 | Msa0770200:intron | 30.0% |
| TACAAAGAGAGTAAATTGGT+AGG | - | chr5_2:40371136-40371155 | None:intergenic | 30.0% | |
| ACAAAGAAACAAAGATCAAG+AGG | - | chr5_2:40371354-40371373 | None:intergenic | 30.0% | |
| TTCTTTGTGAAACTTTCTGT+TGG | + | chr5_2:40371366-40371385 | Msa0770200:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr5_2:40371523-40371542 | Msa0770200:intron | 30.0% | |
| !! | CATGAAAGTGTTGAAATTTG+GGG | - | chr5_2:40371594-40371613 | None:intergenic | 30.0% |
| TAAAACAGTATCACAATGAG+GGG | - | chr5_2:40371886-40371905 | None:intergenic | 30.0% | |
| !!! | GTGATACTGTTTTATTTTGC+TGG | + | chr5_2:40371892-40371911 | Msa0770200:intron | 30.0% |
| TTACATTAAGAGACCAAAAC+AGG | + | chr5_2:40371943-40371962 | Msa0770200:intron | 30.0% | |
| ! | AAGATATGTTGGTCAGTTTT+TGG | + | chr5_2:40372059-40372078 | Msa0770200:intron | 30.0% |
| CACATACAACAATACAACAT+AGG | - | chr5_2:40372172-40372191 | None:intergenic | 30.0% | |
| TCTACCAAACATACATTTAG+AGG | - | chr5_2:40372593-40372612 | None:intergenic | 30.0% | |
| TTTGGTAGAACAACATTTAG+TGG | + | chr5_2:40372604-40372623 | Msa0770200:intron | 30.0% | |
| TTGGTAGAACAACATTTAGT+GGG | + | chr5_2:40372605-40372624 | Msa0770200:intron | 30.0% | |
| ATCAAGCAAAATAATGCAGA+AGG | - | chr5_2:40372728-40372747 | None:intergenic | 30.0% | |
| ! | AGAACATAGAAGTGTAGAAA+AGG | + | chr5_2:40372790-40372809 | Msa0770200:intron | 30.0% |
| ! | GAACATAGAAGTGTAGAAAA+GGG | + | chr5_2:40372791-40372810 | Msa0770200:intron | 30.0% |
| TCTTGTGTAGAAACACAATA+AGG | - | chr5_2:40372892-40372911 | None:intergenic | 30.0% | |
| ! | TTATTGTGTTTCTACACAAG+AGG | + | chr5_2:40372891-40372910 | Msa0770200:intron | 30.0% |
| GGACAAACAAAATATTCTAG+AGG | - | chr5_2:40373045-40373064 | None:intergenic | 30.0% | |
| TCGTTGAGATACAAATAAAC+GGG | - | chr5_2:40373125-40373144 | None:intergenic | 30.0% | |
| TTCTACTTAACTACTCTACT+TGG | + | chr5_2:40373161-40373180 | Msa0770200:intron | 30.0% | |
| !! | CTCATATTATGTGTCGTTTA+AGG | - | chr5_2:40373275-40373294 | None:intergenic | 30.0% |
| CCTATAAAGACATGCTAATT+TGG | - | chr5_2:40373314-40373333 | None:intergenic | 30.0% | |
| CCAAATTAGCATGTCTTTAT+AGG | + | chr5_2:40373311-40373330 | Msa0770200:intron | 30.0% | |
| TTAGCACTGTCTCATTATTA+TGG | + | chr5_2:40373647-40373666 | Msa0770200:three_prime_UTR | 30.0% | |
| TCTCTGATACCTTGAAATAT+AGG | + | chr5_2:40373678-40373697 | Msa0770200:three_prime_UTR | 30.0% | |
| GCTTTCACAAATTCGATTTC+TGG | - | chr5_2:40367968-40367987 | None:intergenic | 35.0% | |
| GAATTTGTGAAAGCAAAGGA+AGG | + | chr5_2:40367974-40367993 | Msa0770200:five_prime_UTR | 35.0% | |
| GATCTCAACAAGCTTCAAAA+GGG | + | chr5_2:40368070-40368089 | Msa0770200:CDS | 35.0% | |
| !! | TGTTCTTAAGGTACCCTTTT+AGG | + | chr5_2:40368304-40368323 | Msa0770200:intron | 35.0% |
| !! | GTTCTTAAGGTACCCTTTTA+GGG | + | chr5_2:40368240-40368259 | Msa0770200:intron | 35.0% |
| GATACAAACTAAGGATGCAT+TGG | + | chr5_2:40368518-40368537 | Msa0770200:intron | 35.0% | |
| ! | TTTTGGTCCTAAATGTGTGA+TGG | - | chr5_2:40368584-40368603 | None:intergenic | 35.0% |
| ! | CACATTTAGGACCAAAATGA+TGG | + | chr5_2:40368587-40368606 | Msa0770200:intron | 35.0% |
| TTAGGACCAAAATGATGGTT+TGG | + | chr5_2:40368592-40368611 | Msa0770200:intron | 35.0% | |
| ATGATTTGATTCATCTGGCA+CGG | + | chr5_2:40368924-40368943 | Msa0770200:intron | 35.0% | |
| CCACTTGGAATGTTTATTAG+GGG | + | chr5_2:40368992-40369011 | Msa0770200:intron | 35.0% | |
| TAGCTATACATTTGCATACG+TGG | + | chr5_2:40369070-40369089 | Msa0770200:intron | 35.0% | |
| CTTTCTATGCTTCACAATAG+CGG | - | chr5_2:40369593-40369612 | None:intergenic | 35.0% | |
| TTGTGAAGCATAGAAAGAGT+CGG | + | chr5_2:40369596-40369615 | Msa0770200:intron | 35.0% | |
| TATGACTAGAGCCTATAACA+AGG | + | chr5_2:40369658-40369677 | Msa0770200:intron | 35.0% | |
| TACGAAAGATGAAGACAGTA+AGG | - | chr5_2:40369701-40369720 | None:intergenic | 35.0% | |
| ACTGTCTTCATCTTTCGTAT+AGG | + | chr5_2:40369702-40369721 | Msa0770200:intron | 35.0% | |
| GGTCTGCTAAATAAAGATAC+AGG | + | chr5_2:40369797-40369816 | Msa0770200:intron | 35.0% | |
| ATGCATGTGATTAGACATAC+TGG | + | chr5_2:40369918-40369937 | Msa0770200:intron | 35.0% | |
| TGCATGTGATTAGACATACT+GGG | + | chr5_2:40369919-40369938 | Msa0770200:intron | 35.0% | |
| TTGAGTACATCATACTCTCA+TGG | - | chr5_2:40370005-40370024 | None:intergenic | 35.0% | |
| GATGAATATGGATGGAATAG+TGG | + | chr5_2:40370046-40370065 | Msa0770200:intron | 35.0% | |
| TGGACAGTGAAGTAATACAA+TGG | + | chr5_2:40370080-40370099 | Msa0770200:intron | 35.0% | |
| CAGTGAAGTAATACAATGGA+TGG | + | chr5_2:40370084-40370103 | Msa0770200:intron | 35.0% | |
| TGTGGAGTTATTAGGAAATG+AGG | - | chr5_2:40370209-40370228 | None:intergenic | 35.0% | |
| GAATCCAATAAGTAGAGAGA+AGG | - | chr5_2:40370252-40370271 | None:intergenic | 35.0% | |
| ATAATCAGATTGACCCTGAT+AGG | - | chr5_2:40370454-40370473 | None:intergenic | 35.0% | |
| CAAGGAAAATGCTGTAAAGA+AGG | + | chr5_2:40370638-40370657 | Msa0770200:intron | 35.0% | |
| CAGAGGAGAACTCTAATATA+AGG | - | chr5_2:40370782-40370801 | None:intergenic | 35.0% | |
| TCAAAAGAAGTAGGAATGAG+CGG | - | chr5_2:40370850-40370869 | None:intergenic | 35.0% | |
| ! | GGAAGGTTTTCAAAAGAAGT+AGG | - | chr5_2:40370859-40370878 | None:intergenic | 35.0% |
| CAACATAAACCACACTAACA+GGG | - | chr5_2:40370906-40370925 | None:intergenic | 35.0% | |
| CTGTTAGTGTGGTTTATGTT+GGG | + | chr5_2:40370905-40370924 | Msa0770200:intron | 35.0% | |
| AAAGGAAGAGAGTAAAGAGA+AGG | + | chr5_2:40370970-40370989 | Msa0770200:intron | 35.0% | |
| AAGGAAGAGAGTAAAGAGAA+GGG | + | chr5_2:40370971-40370990 | Msa0770200:intron | 35.0% | |
| GAGTTTAGGTCTCTTGAAAA+TGG | + | chr5_2:40371039-40371058 | Msa0770200:intron | 35.0% | |
| AGAGAGTAAATTGGTAGGAA+CGG | - | chr5_2:40371131-40371150 | None:intergenic | 35.0% | |
| GTATTTATCTCAGGATGTCT+TGG | + | chr5_2:40371248-40371267 | Msa0770200:intron | 35.0% | |
| TGGAAATTCCGCTTTAATTG+TGG | + | chr5_2:40371386-40371405 | Msa0770200:intron | 35.0% | |
| ATTTAGTCCCAATGATAGAC+AGG | + | chr5_2:40371497-40371516 | Msa0770200:intron | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr5_2:40371526-40371545 | Msa0770200:intron | 35.0% | |
| GATTTGCACAAAGCACAAAT+AGG | - | chr5_2:40371733-40371752 | None:intergenic | 35.0% | |
| !!! | AACAACCCTCGTTTTTTAGT+CGG | - | chr5_2:40371777-40371796 | None:intergenic | 35.0% |
| ! | CTTGTCAAATTCTTTTGACC+AGG | + | chr5_2:40371823-40371842 | Msa0770200:intron | 35.0% |
| !!! | TGTTGGTCAGTTTTTGGTTA+AGG | + | chr5_2:40372065-40372084 | Msa0770200:intron | 35.0% |
| !!! | TCAGTTTTTGGTTAAGGAGT+TGG | + | chr5_2:40372071-40372090 | Msa0770200:intron | 35.0% |
| !!! | TTTTTGGTTAAGGAGTTGGA+AGG | + | chr5_2:40372075-40372094 | Msa0770200:intron | 35.0% |
| !! | TTTTGGTTAAGGAGTTGGAA+GGG | + | chr5_2:40372076-40372095 | Msa0770200:intron | 35.0% |
| GATTCCAAGCTTTCAATACT+TGG | + | chr5_2:40372104-40372123 | Msa0770200:intron | 35.0% | |
| CAAGCTTTCAATACTTGGAA+GGG | + | chr5_2:40372109-40372128 | Msa0770200:intron | 35.0% | |
| ATATATGGTCTTTGTGTGTC+AGG | + | chr5_2:40372406-40372425 | Msa0770200:intron | 35.0% | |
| GCAGAATAGCAAGAAAGAAA+CGG | + | chr5_2:40372467-40372486 | Msa0770200:CDS | 35.0% | |
| TAGGCCTCTAAATGTATGTT+TGG | + | chr5_2:40372586-40372605 | Msa0770200:intron | 35.0% | |
| GACTACCATATATAAGACAC+AGG | - | chr5_2:40372632-40372651 | None:intergenic | 35.0% | |
| TTCAAAAAAAATCACGCACC+AGG | - | chr5_2:40372691-40372710 | None:intergenic | 35.0% | |
| GTTGAGATACAAATAAACGG+GGG | - | chr5_2:40373123-40373142 | None:intergenic | 35.0% | |
| CGTTGAGATACAAATAAACG+GGG | - | chr5_2:40373124-40373143 | None:intergenic | 35.0% | |
| ACAAAAGATGCAATCTCTTC+AGG | + | chr5_2:40373421-40373440 | Msa0770200:CDS | 35.0% | |
| TTTGGCATCAAAAGTCACAT+TGG | - | chr5_2:40373543-40373562 | None:intergenic | 35.0% | |
| ! | CTTTTGATGCCAAAGAAAGA+TGG | + | chr5_2:40373549-40373568 | Msa0770200:three_prime_UTR | 35.0% |
| ATCTTTCCACCATCTTTCTT+TGG | - | chr5_2:40373561-40373580 | None:intergenic | 35.0% | |
| CAAACAGACAAACTTGTAGA+TGG | + | chr5_2:40373615-40373634 | Msa0770200:three_prime_UTR | 35.0% | |
| TTTGTGAAAGCAAAGGAAGG+AGG | + | chr5_2:40367977-40367996 | Msa0770200:five_prime_UTR | 40.0% | |
| GCGTTGAAGATCTCTAATGT+TGG | - | chr5_2:40368029-40368048 | None:intergenic | 40.0% | |
| TAGAGATCTTCAACGCGAAT+TGG | + | chr5_2:40368033-40368052 | Msa0770200:CDS | 40.0% | |
| CGATCTCAACAAGCTTCAAA+AGG | + | chr5_2:40368069-40368088 | Msa0770200:CDS | 40.0% | |
| CGAAAATGAGCTCGTTCTTA+AGG | + | chr5_2:40368227-40368246 | Msa0770200:CDS | 40.0% | |
| GGTATGAACTGACCCTAAAA+GGG | - | chr5_2:40368320-40368339 | None:intergenic | 40.0% | |
| ATTGAAGCCAGAACAAAGCT+CGG | - | chr5_2:40368341-40368360 | None:intergenic | 40.0% | |
| !! | AGCTTTGTTCTGGCTTCAAT+TGG | + | chr5_2:40368341-40368360 | Msa0770200:intron | 40.0% |
| !! | GCTTTGTTCTGGCTTCAATT+GGG | + | chr5_2:40368342-40368361 | Msa0770200:intron | 40.0% |
| !! | TCTCGGATTAGTTGGTCTTT+GGG | + | chr5_2:40368392-40368411 | Msa0770200:intron | 40.0% |
| AACAGTGCCATCACACATTT+AGG | + | chr5_2:40368574-40368593 | Msa0770200:intron | 40.0% | |
| TGTTAAGCAAGATTTGGCTG+AGG | + | chr5_2:40368737-40368756 | Msa0770200:CDS | 40.0% | |
| TGATTTGATTCATCTGGCAC+GGG | + | chr5_2:40368925-40368944 | Msa0770200:intron | 40.0% | |
| CCCCTAATAAACATTCCAAG+TGG | - | chr5_2:40368995-40369014 | None:intergenic | 40.0% | |
| CAACACAAGTCAACATTTGG+TGG | - | chr5_2:40369407-40369426 | None:intergenic | 40.0% | |
| CCTCAACACAAGTCAACATT+TGG | - | chr5_2:40369410-40369429 | None:intergenic | 40.0% | |
| !! | CCAAATGTTGACTTGTGTTG+AGG | + | chr5_2:40369407-40369426 | Msa0770200:intron | 40.0% |
| !! | TTGACTTGTGTTGAGGAGTT+TGG | + | chr5_2:40369414-40369433 | Msa0770200:intron | 40.0% |
| AGGTGTATGTTAGGAGAGAT+AGG | + | chr5_2:40369748-40369767 | Msa0770200:intron | 40.0% | |
| TATGTTAGGAGAGATAGGAG+AGG | + | chr5_2:40369753-40369772 | Msa0770200:intron | 40.0% | |
| ! | CTTTGGCTAGTTAGTTTGGA+AGG | + | chr5_2:40369847-40369866 | Msa0770200:intron | 40.0% |
| CTTTCTTTCATTCCCTTCCT+AGG | - | chr5_2:40369882-40369901 | None:intergenic | 40.0% | |
| CTAGGAAGGGAATGAAAGAA+AGG | + | chr5_2:40369880-40369899 | Msa0770200:intron | 40.0% | |
| ATGTGATTAGACATACTGGG+AGG | + | chr5_2:40369922-40369941 | Msa0770200:intron | 40.0% | |
| TGGATGGAGAATAATCTCCT+TGG | + | chr5_2:40370100-40370119 | Msa0770200:intron | 40.0% | |
| GAATTGTTGTCACACCAGTA+GGG | - | chr5_2:40370177-40370196 | None:intergenic | 40.0% | |
| TGAATTGTTGTCACACCAGT+AGG | - | chr5_2:40370178-40370197 | None:intergenic | 40.0% | |
| CAATAAGTAGAGAGAAGGAG+GGG | - | chr5_2:40370247-40370266 | None:intergenic | 40.0% | |
| CCAATAAGTAGAGAGAAGGA+GGG | - | chr5_2:40370248-40370267 | None:intergenic | 40.0% | |
| TCCAATAAGTAGAGAGAAGG+AGG | - | chr5_2:40370249-40370268 | None:intergenic | 40.0% | |
| AGGGATTTGAGGATCATGAT+TGG | - | chr5_2:40370286-40370305 | None:intergenic | 40.0% | |
| AGAATAACAGAATGGACAGG+TGG | - | chr5_2:40370314-40370333 | None:intergenic | 40.0% | |
| GCAAGAATAACAGAATGGAC+AGG | - | chr5_2:40370317-40370336 | None:intergenic | 40.0% | |
| TGGGAGTAAAAGAAGGAGAA+AGG | - | chr5_2:40370352-40370371 | None:intergenic | 40.0% | |
| AGAGAAGACGCTCAAGTATT+AGG | - | chr5_2:40370383-40370402 | None:intergenic | 40.0% | |
| TATAAGAGGAGGGGTAAAAG+AGG | - | chr5_2:40370413-40370432 | None:intergenic | 40.0% | |
| TACTTAACTAGTGGCCTATC+AGG | + | chr5_2:40370437-40370456 | Msa0770200:intron | 40.0% | |
| ACTTAACTAGTGGCCTATCA+GGG | + | chr5_2:40370438-40370457 | Msa0770200:intron | 40.0% | |
| GAAAACAGAGGCTATGGTAT+TGG | - | chr5_2:40370505-40370524 | None:intergenic | 40.0% | |
| ! | ACCATAGCCTCTGTTTTCTT+TGG | + | chr5_2:40370507-40370526 | Msa0770200:intron | 40.0% |
| ACCAAAGAAAACAGAGGCTA+TGG | - | chr5_2:40370511-40370530 | None:intergenic | 40.0% | |
| ! | ATAGCCTCTGTTTTCTTTGG+TGG | + | chr5_2:40370510-40370529 | Msa0770200:intron | 40.0% |
| GTTGAATGATCAGCACATTG+AGG | - | chr5_2:40370545-40370564 | None:intergenic | 40.0% | |
| CTGTAAAGAAGGAAACACAG+CGG | + | chr5_2:40370649-40370668 | Msa0770200:intron | 40.0% | |
| GGAATTGAAACCATATGGCA+GGG | - | chr5_2:40370829-40370848 | None:intergenic | 40.0% | |
| TGAGCGGAATTGAAACCATA+TGG | - | chr5_2:40370834-40370853 | None:intergenic | 40.0% | |
| CCAACATAAACCACACTAAC+AGG | - | chr5_2:40370907-40370926 | None:intergenic | 40.0% | |
| CCTGTTAGTGTGGTTTATGT+TGG | + | chr5_2:40370904-40370923 | Msa0770200:intron | 40.0% | |
| GTGGTTTATGTTGGGAAAGT+TGG | + | chr5_2:40370913-40370932 | Msa0770200:intron | 40.0% | |
| AAGCAGAGGATTAAACCTTC+TGG | + | chr5_2:40370940-40370959 | Msa0770200:intron | 40.0% | |
| AGCAGAGGATTAAACCTTCT+GGG | + | chr5_2:40370941-40370960 | Msa0770200:intron | 40.0% | |
| GAGAGTAAATTGGTAGGAAC+GGG | - | chr5_2:40371130-40371149 | None:intergenic | 40.0% | |
| AAACTTCCAAATCAGCAGAC+TGG | - | chr5_2:40371320-40371339 | None:intergenic | 40.0% | |
| !! | ACAAAGATCAAGAGGTGTCA+GGG | - | chr5_2:40371346-40371365 | None:intergenic | 40.0% |
| !! | AACAAAGATCAAGAGGTGTC+AGG | - | chr5_2:40371347-40371366 | None:intergenic | 40.0% |
| AAACCCAAAGGTCGCAATTT+AGG | - | chr5_2:40371426-40371445 | None:intergenic | 40.0% | |
| TGTAATGAAGGCAAACCCAA+AGG | - | chr5_2:40371438-40371457 | None:intergenic | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr5_2:40371469-40371488 | Msa0770200:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr5_2:40371470-40371489 | Msa0770200:intron | 40.0% |
| CAAGAGTCCTGTCTATCATT+GGG | - | chr5_2:40371507-40371526 | None:intergenic | 40.0% | |
| TCAAGAGTCCTGTCTATCAT+TGG | - | chr5_2:40371508-40371527 | None:intergenic | 40.0% | |
| !! | TGGTTTTGCAAGGATGAGTT+AGG | + | chr5_2:40371568-40371587 | Msa0770200:intron | 40.0% |
| !!! | ACAACCCTCGTTTTTTAGTC+GGG | - | chr5_2:40371776-40371795 | None:intergenic | 40.0% |
| CTAAAAAACGAGGGTTGTTG+AGG | + | chr5_2:40371778-40371797 | Msa0770200:intron | 40.0% | |
| ! | AGGATAGATGTTGGTTAGCA+TGG | - | chr5_2:40371853-40371872 | None:intergenic | 40.0% |
| AATGCACACTAACTGTCCTA+AGG | - | chr5_2:40371980-40371999 | None:intergenic | 40.0% | |
| !! | CCTTCCAAGTATTGAAAGCT+TGG | - | chr5_2:40372111-40372130 | None:intergenic | 40.0% |
| CCAAGCTTTCAATACTTGGA+AGG | + | chr5_2:40372108-40372127 | Msa0770200:intron | 40.0% | |
| !! | ACGGATTGCTGCATGTTTTA+TGG | + | chr5_2:40372296-40372315 | Msa0770200:intron | 40.0% |
| GTAGATCCTAGCTACTAGAT+AGG | + | chr5_2:40372567-40372586 | Msa0770200:intron | 40.0% | |
| TGGGTCCTGTGTCTTATATA+TGG | + | chr5_2:40372624-40372643 | Msa0770200:intron | 40.0% | |
| CGTACAATACACGAAATGGT+GGG | - | chr5_2:40372866-40372885 | None:intergenic | 40.0% | |
| !! | CTACACAAGAGGTTGTTTTC+AGG | + | chr5_2:40372902-40372921 | Msa0770200:intron | 40.0% |
| ACTGTAACTTGACCGTTCAT+AGG | + | chr5_2:40373486-40373505 | Msa0770200:three_prime_UTR | 40.0% | |
| ACTCATTCACCACCTATGAA+CGG | - | chr5_2:40373501-40373520 | None:intergenic | 40.0% | |
| TTGATGCCAAAGAAAGATGG+TGG | + | chr5_2:40373552-40373571 | Msa0770200:three_prime_UTR | 40.0% | |
| ACTAGAGTGGTTTCTGTCTT+TGG | - | chr5_2:40373589-40373608 | None:intergenic | 40.0% | |
| CTGTTTGAGCAAAACTAGAG+TGG | - | chr5_2:40373602-40373621 | None:intergenic | 40.0% | |
| !! | TTCGATTTCTGGCACACTGA+GGG | - | chr5_2:40367957-40367976 | None:intergenic | 45.0% |
| !! | ATTCGATTTCTGGCACACTG+AGG | - | chr5_2:40367958-40367977 | None:intergenic | 45.0% |
| GGGTACCTTAAGAACAAGCT+TGG | - | chr5_2:40368300-40368319 | None:intergenic | 45.0% | |
| CGGTATGAACTGACCCTAAA+AGG | - | chr5_2:40368321-40368340 | None:intergenic | 45.0% | |
| !! | GTTCATACCGAGCTTTGTTC+TGG | + | chr5_2:40368331-40368350 | Msa0770200:intron | 45.0% |
| CTTCAATTGGGTTCTGCTAG+TGG | + | chr5_2:40368354-40368373 | Msa0770200:intron | 45.0% | |
| !! | GATTGGTCTCTCGGATTAGT+TGG | + | chr5_2:40368384-40368403 | Msa0770200:intron | 45.0% |
| !! | CTCTCGGATTAGTTGGTCTT+TGG | + | chr5_2:40368391-40368410 | Msa0770200:intron | 45.0% |
| TCTCTTGCGGACATTTGCAT+TGG | - | chr5_2:40368763-40368782 | None:intergenic | 45.0% | |
| GAGGAGTTTGGATAGTGTGT+AGG | + | chr5_2:40369426-40369445 | Msa0770200:intron | 45.0% | |
| CTTAGTTTACCCATGTCGAG+TGG | + | chr5_2:40369624-40369643 | Msa0770200:intron | 45.0% | |
| GACTAGAGCCTATAACAAGG+AGG | + | chr5_2:40369661-40369680 | Msa0770200:intron | 45.0% | |
| ! | CCTTAAGGCCTCCTTGTTAT+AGG | - | chr5_2:40369672-40369691 | None:intergenic | 45.0% |
| CCTATAACAAGGAGGCCTTA+AGG | + | chr5_2:40369669-40369688 | Msa0770200:intron | 45.0% | |
| ACAGTAAGGTTGCTGCCTTA+AGG | - | chr5_2:40369687-40369706 | None:intergenic | 45.0% | |
| ! | TGGCTAGTTAGTTTGGAAGG+AGG | + | chr5_2:40369850-40369869 | Msa0770200:intron | 45.0% |
| TGATTAGACATACTGGGAGG+AGG | + | chr5_2:40369925-40369944 | Msa0770200:intron | 45.0% | |
| GGGGAGTTTGTGGAGTTATT+AGG | - | chr5_2:40370217-40370236 | None:intergenic | 45.0% | |
| CCCTCCTTCTCTCTACTTAT+TGG | + | chr5_2:40370245-40370264 | Msa0770200:intron | 45.0% | |
| GGATCATGATTGGAGTGCAA+AGG | - | chr5_2:40370276-40370295 | None:intergenic | 45.0% | |
| AGGGGGCAAGAATAACAGAA+TGG | - | chr5_2:40370322-40370341 | None:intergenic | 45.0% | |
| CAAGTATTAGGAGGACAGCT+GGG | - | chr5_2:40370371-40370390 | None:intergenic | 45.0% | |
| TCAAGTATTAGGAGGACAGC+TGG | - | chr5_2:40370372-40370391 | None:intergenic | 45.0% | |
| GAAGACGCTCAAGTATTAGG+AGG | - | chr5_2:40370380-40370399 | None:intergenic | 45.0% | |
| !! | ATGGTATTGGTAGTGGCTCT+GGG | - | chr5_2:40370492-40370511 | None:intergenic | 45.0% |
| !! | TATGGTATTGGTAGTGGCTC+TGG | - | chr5_2:40370493-40370512 | None:intergenic | 45.0% |
| !! | AGAGGCTATGGTATTGGTAG+TGG | - | chr5_2:40370499-40370518 | None:intergenic | 45.0% |
| GATGCCACCAAAGAAAACAG+AGG | - | chr5_2:40370517-40370536 | None:intergenic | 45.0% | |
| TCACCCTTCTCGCAAATCTT+TGG | + | chr5_2:40370574-40370593 | Msa0770200:intron | 45.0% | |
| CGTCCAAAGATTTGCGAGAA+GGG | - | chr5_2:40370580-40370599 | None:intergenic | 45.0% | |
| TCGTCCAAAGATTTGCGAGA+AGG | - | chr5_2:40370581-40370600 | None:intergenic | 45.0% | |
| ! | TCTCTATAGGAGTCTAGCTC+TGG | - | chr5_2:40370692-40370711 | None:intergenic | 45.0% |
| ATATGGCAGGGAGTTTGAGA+GGG | - | chr5_2:40370817-40370836 | None:intergenic | 45.0% | |
| CGGAATTGAAACCATATGGC+AGG | - | chr5_2:40370830-40370849 | None:intergenic | 45.0% | |
| AACCTTCCACATATTGGGCA+TGG | + | chr5_2:40370871-40370890 | Msa0770200:intron | 45.0% | |
| ACCTTCCACATATTGGGCAT+GGG | + | chr5_2:40370872-40370891 | Msa0770200:intron | 45.0% | |
| AAACCTTCTGGGTCAGTCAA+AGG | + | chr5_2:40370952-40370971 | Msa0770200:intron | 45.0% | |
| AATCAGCAGACTGGAAAGCA+GGG | - | chr5_2:40371311-40371330 | None:intergenic | 45.0% | |
| AAATCAGCAGACTGGAAAGC+AGG | - | chr5_2:40371312-40371331 | None:intergenic | 45.0% | |
| ! | TGCTTTCCAGTCTGCTGATT+TGG | + | chr5_2:40371311-40371330 | Msa0770200:intron | 45.0% |
| TCGCCTAAATTGCGACCTTT+GGG | + | chr5_2:40371420-40371439 | Msa0770200:intron | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr5_2:40371462-40371481 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | + | chr5_2:40371460-40371479 | Msa0770200:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr5_2:40371465-40371484 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | - | chr5_2:40371471-40371490 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr5_2:40371468-40371487 | Msa0770200:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr5_2:40371471-40371490 | Msa0770200:intron | 45.0% |
| CAAAACCAGCTTGTAAGGTG+AGG | - | chr5_2:40371556-40371575 | None:intergenic | 45.0% | |
| CCTTGCAAAACCAGCTTGTA+AGG | - | chr5_2:40371561-40371580 | None:intergenic | 45.0% | |
| !!! | CCTTACAAGCTGGTTTTGCA+AGG | + | chr5_2:40371558-40371577 | Msa0770200:intron | 45.0% |
| !!! | CTCGTTTTTTAGTCGGGCTT+GGG | - | chr5_2:40371770-40371789 | None:intergenic | 45.0% |
| CAAGCCCGACTAAAAAACGA+GGG | + | chr5_2:40371769-40371788 | Msa0770200:intron | 45.0% | |
| AGGACAGCAAGGATAGATGT+TGG | - | chr5_2:40371862-40371881 | None:intergenic | 45.0% | |
| ACAGTATCACAATGAGGGGA+AGG | - | chr5_2:40371882-40371901 | None:intergenic | 45.0% | |
| TGATGCCACGGTTCAAGATT+TGG | + | chr5_2:40372437-40372456 | Msa0770200:CDS | 45.0% | |
| CTCTTCCAAATCTTGAACCG+TGG | - | chr5_2:40372445-40372464 | None:intergenic | 45.0% | |
| TAGAGGCCTATCTAGTAGCT+AGG | - | chr5_2:40372576-40372595 | None:intergenic | 45.0% | |
| GTCTTAATGCCATCCCTGTT+CGG | + | chr5_2:40372649-40372668 | Msa0770200:intron | 45.0% | |
| ACACACACTGTGTTCGGAAA+GGG | + | chr5_2:40372838-40372857 | Msa0770200:intron | 45.0% | |
| GCGTACAATACACGAAATGG+TGG | - | chr5_2:40372867-40372886 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACGAAA+TGG | - | chr5_2:40372870-40372889 | None:intergenic | 45.0% | |
| CTTGTGACCTTTCAGTCACA+TGG | + | chr5_2:40372967-40372986 | Msa0770200:intron | 45.0% | |
| GTTGTTGCCATGTGACTGAA+AGG | - | chr5_2:40372942-40372961 | None:intergenic | 45.0% | |
| ACAACTTTATCGTTGCGCCA+AGG | + | chr5_2:40372992-40373011 | Msa0770200:intron | 45.0% | |
| TGAAACGAAAGAGAGAGCCT+TGG | - | chr5_2:40373012-40373031 | None:intergenic | 45.0% | |
| AAGATGCAATCTCTTCAGGC+TGG | + | chr5_2:40373425-40373444 | Msa0770200:CDS | 45.0% | |
| AGATGCAATCTCTTCAGGCT+GGG | + | chr5_2:40373426-40373445 | Msa0770200:CDS | 45.0% | |
| AATCTCTTCAGGCTGGGAAA+GGG | + | chr5_2:40373432-40373451 | Msa0770200:CDS | 45.0% | |
| GTAACTTGACCGTTCATAGG+TGG | + | chr5_2:40373489-40373508 | Msa0770200:three_prime_UTR | 45.0% | |
| GTGAAAGCAAAGGAAGGAGG+AGG | + | chr5_2:40367980-40367999 | Msa0770200:five_prime_UTR | 50.0% | |
| ! | CTGCTAGTGGACAGTTGGAT+TGG | + | chr5_2:40368367-40368386 | Msa0770200:intron | 50.0% |
| !! | GGACAGTTGGATTGGTCTCT+CGG | + | chr5_2:40368375-40368394 | Msa0770200:intron | 50.0% |
| !! | GGATTAGTTGGTCTTTGGGC+TGG | + | chr5_2:40368396-40368415 | Msa0770200:intron | 50.0% |
| ACCCATGTCGAGTGGTTGTT+CGG | + | chr5_2:40369632-40369651 | Msa0770200:intron | 50.0% | |
| !! | TTGGAAGGAGGAGAGTACCT+AGG | + | chr5_2:40369862-40369881 | Msa0770200:intron | 50.0% |
| !! | AAGGAGGAGAGTACCTAGGA+AGG | + | chr5_2:40369866-40369885 | Msa0770200:intron | 50.0% |
| !! | AGGAGGAGAGTACCTAGGAA+GGG | + | chr5_2:40369867-40369886 | Msa0770200:intron | 50.0% |
| !! | TCACTATGAGAGCACCCTAC+TGG | + | chr5_2:40370160-40370179 | Msa0770200:intron | 50.0% |
| AGAGAAGGAGGGGAAGGAAA+GGG | - | chr5_2:40370237-40370256 | None:intergenic | 50.0% | |
| AAGTAGAGAGAAGGAGGGGA+AGG | - | chr5_2:40370243-40370262 | None:intergenic | 50.0% | |
| ! | AAGGAGAAAGGTGTGCACAG+GGG | - | chr5_2:40370340-40370359 | None:intergenic | 50.0% |
| ! | GAAGGAGAAAGGTGTGCACA+GGG | - | chr5_2:40370341-40370360 | None:intergenic | 50.0% |
| ! | AGAAGGAGAAAGGTGTGCAC+AGG | - | chr5_2:40370342-40370361 | None:intergenic | 50.0% |
| GGACAGCTGGGAGTAAAAGA+AGG | - | chr5_2:40370359-40370378 | None:intergenic | 50.0% | |
| !! | TGGCTCTGGGGAGAAAGAAA+TGG | - | chr5_2:40370479-40370498 | None:intergenic | 50.0% |
| !! | TGGTATTGGTAGTGGCTCTG+GGG | - | chr5_2:40370491-40370510 | None:intergenic | 50.0% |
| ! | GGTGCTGAGAAGAGAGAGAA+AGG | - | chr5_2:40370760-40370779 | None:intergenic | 50.0% |
| TATGGCAGGGAGTTTGAGAG+GGG | - | chr5_2:40370816-40370835 | None:intergenic | 50.0% | |
| CATATGGCAGGGAGTTTGAG+AGG | - | chr5_2:40370818-40370837 | None:intergenic | 50.0% | |
| CTCTCAAACTCCCTGCCATA+TGG | + | chr5_2:40370816-40370835 | Msa0770200:intron | 50.0% | |
| GGAAAGTTGGACAGAAGCAG+AGG | + | chr5_2:40370926-40370945 | Msa0770200:intron | 50.0% | |
| CTTCCTTTGACTGACCCAGA+AGG | - | chr5_2:40370958-40370977 | None:intergenic | 50.0% | |
| ! | GCAGAATCACTGGCTGGAAA+TGG | - | chr5_2:40371284-40371303 | None:intergenic | 50.0% |
| ! | GGTTTTGCAGAATCACTGGC+TGG | - | chr5_2:40371290-40371309 | None:intergenic | 50.0% |
| ! | GCAGGGTTTTGCAGAATCAC+TGG | - | chr5_2:40371294-40371313 | None:intergenic | 50.0% |
| GTCGCAATTTAGGCGACTAG+GGG | - | chr5_2:40371416-40371435 | None:intergenic | 50.0% | |
| GGTCGCAATTTAGGCGACTA+GGG | - | chr5_2:40371417-40371436 | None:intergenic | 50.0% | |
| AGGTCGCAATTTAGGCGACT+AGG | - | chr5_2:40371418-40371437 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGCGACCTT+TGG | + | chr5_2:40371419-40371438 | Msa0770200:intron | 50.0% | |
| ! | GGTGTTGGAGGCTGTAATGA+AGG | - | chr5_2:40371450-40371469 | None:intergenic | 50.0% |
| !!! | CCTCGTTTTTTAGTCGGGCT+TGG | - | chr5_2:40371771-40371790 | None:intergenic | 50.0% |
| CCAAGCCCGACTAAAAAACG+AGG | + | chr5_2:40371768-40371787 | Msa0770200:intron | 50.0% | |
| AGACCAAAACAGGCCTGAAC+TGG | + | chr5_2:40371953-40371972 | Msa0770200:intron | 50.0% | |
| ACTGTCCTAAGGACCAGTTC+AGG | - | chr5_2:40371969-40371988 | None:intergenic | 50.0% | |
| TTCAAGGGAACAGCCGAACA+GGG | - | chr5_2:40372665-40372684 | None:intergenic | 50.0% | |
| ATTCAAGGGAACAGCCGAAC+AGG | - | chr5_2:40372666-40372685 | None:intergenic | 50.0% | |
| TGTTCGGCTGTTCCCTTGAA+TGG | + | chr5_2:40372665-40372684 | Msa0770200:intron | 50.0% | |
| AAGTGTAGAAAAGGGCAGCC+CGG | + | chr5_2:40372799-40372818 | Msa0770200:intron | 50.0% | |
| TTCCGAACACAGTGTGTGTG+CGG | - | chr5_2:40372837-40372856 | None:intergenic | 50.0% | |
| CACACACACTGTGTTCGGAA+AGG | + | chr5_2:40372837-40372856 | Msa0770200:intron | 50.0% | |
| CACACACTGTGTTCGGAAAG+GGG | + | chr5_2:40372839-40372858 | Msa0770200:intron | 50.0% | |
| CAATCTCTTCAGGCTGGGAA+AGG | + | chr5_2:40373431-40373450 | Msa0770200:CDS | 50.0% | |
| ! | GGGTTCTGCTAGTGGACAGT+TGG | + | chr5_2:40368362-40368381 | Msa0770200:intron | 55.0% |
| GCCGAACAACCACTCGACAT+GGG | - | chr5_2:40369636-40369655 | None:intergenic | 55.0% | |
| AGCCGAACAACCACTCGACA+TGG | - | chr5_2:40369637-40369656 | None:intergenic | 55.0% | |
| GGGAAGGAAAGGGGAGTTTG+TGG | - | chr5_2:40370227-40370246 | None:intergenic | 55.0% | |
| GAGAAGGAGGGGAAGGAAAG+GGG | - | chr5_2:40370236-40370255 | None:intergenic | 55.0% | |
| GAGAGAAGGAGGGGAAGGAA+AGG | - | chr5_2:40370238-40370257 | None:intergenic | 55.0% | |
| AGGTGGCAAGCAGGGATTTG+AGG | - | chr5_2:40370297-40370316 | None:intergenic | 55.0% | |
| GAATGGACAGGTGGCAAGCA+GGG | - | chr5_2:40370305-40370324 | None:intergenic | 55.0% | |
| AGAATGGACAGGTGGCAAGC+AGG | - | chr5_2:40370306-40370325 | None:intergenic | 55.0% | |
| ! | AGGAGAAAGGTGTGCACAGG+GGG | - | chr5_2:40370339-40370358 | None:intergenic | 55.0% |
| !! | AGGAGTCTAGCTCTGGCAGT+AGG | - | chr5_2:40370685-40370704 | None:intergenic | 55.0% |
| GCCCATGCCCAATATGTGGA+AGG | - | chr5_2:40370876-40370895 | None:intergenic | 55.0% | |
| AGCAGCCCATGCCCAATATG+TGG | - | chr5_2:40370880-40370899 | None:intergenic | 55.0% | |
| GCTGCTTCTCCCTGTTAGTG+TGG | + | chr5_2:40370894-40370913 | Msa0770200:intron | 55.0% | |
| GGGGCGGACCACAATTAAAG+CGG | - | chr5_2:40371397-40371416 | None:intergenic | 55.0% | |
| GCAATTTAGGCGACTAGGGG+CGG | - | chr5_2:40371413-40371432 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr5_2:40371474-40371493 | Msa0770200:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+TGG | + | chr5_2:40371548-40371567 | Msa0770200:intron | 55.0% | |
| GTTGGTTAGCATGGTGTGCC+TGG | - | chr5_2:40371844-40371863 | None:intergenic | 55.0% | |
| CAATGAGGGGAAGGACAGCA+AGG | - | chr5_2:40371873-40371892 | None:intergenic | 55.0% | |
| ! | GGACCAGTTCAGGCCTGTTT+TGG | - | chr5_2:40371959-40371978 | None:intergenic | 55.0% |
| ACAGGCCTGAACTGGTCCTT+AGG | + | chr5_2:40371961-40371980 | Msa0770200:intron | 55.0% | |
| !! | CAGGAAGCGTCTTGATGCCA+CGG | + | chr5_2:40372425-40372444 | Msa0770200:intron | 55.0% |
| TCACGCACCAGGCCATTCAA+GGG | - | chr5_2:40372680-40372699 | None:intergenic | 55.0% | |
| ATCACGCACCAGGCCATTCA+AGG | - | chr5_2:40372681-40372700 | None:intergenic | 55.0% | |
| TCCCGCACACACACTGTGTT+CGG | + | chr5_2:40372832-40372851 | Msa0770200:intron | 55.0% | |
| TCCGAACACAGTGTGTGTGC+GGG | - | chr5_2:40372836-40372855 | None:intergenic | 55.0% | |
| TCTTCAGGCTGGGAAAGGGA+AGG | + | chr5_2:40373436-40373455 | Msa0770200:CDS | 55.0% | |
| GAGGGGAGCAAACAGTGCAG+AGG | - | chr5_2:40370799-40370818 | None:intergenic | 60.0% | |
| AGGGAACAGCCGAACAGGGA+TGG | - | chr5_2:40372661-40372680 | None:intergenic | 60.0% | |
| GGCTGTTCCCTTGAATGGCC+TGG | + | chr5_2:40372670-40372689 | Msa0770200:intron | 60.0% | |
| ! | TGTGCGGGAGCTTTGTGCAC+CGG | - | chr5_2:40372821-40372840 | None:intergenic | 60.0% |
| ! | GTGCGGGAGCTTTGTGCACC+GGG | - | chr5_2:40372820-40372839 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 40367944 | 40373702 | 40367944 | ID=Msa0770200;Name=Msa0770200 |
| chr5_2 | mRNA | 40367944 | 40373702 | 40367944 | ID=Msa0770200-mRNA-1;Parent=Msa0770200;Name=Msa0770200-mRNA-1;_AED=0.02;_eAED=0.02;_QI=72|1|1|1|0.75|1|5|239|129 |
| chr5_2 | exon | 40367944 | 40368091 | 40367944 | ID=Msa0770200-mRNA-1:exon:12857;Parent=Msa0770200-mRNA-1 |
| chr5_2 | exon | 40368178 | 40368248 | 40368178 | ID=Msa0770200-mRNA-1:exon:12858;Parent=Msa0770200-mRNA-1 |
| chr5_2 | exon | 40368681 | 40368805 | 40368681 | ID=Msa0770200-mRNA-1:exon:12859;Parent=Msa0770200-mRNA-1 |
| chr5_2 | exon | 40372428 | 40372488 | 40372428 | ID=Msa0770200-mRNA-1:exon:12860;Parent=Msa0770200-mRNA-1 |
| chr5_2 | exon | 40373407 | 40373702 | 40373407 | ID=Msa0770200-mRNA-1:exon:12861;Parent=Msa0770200-mRNA-1 |
| chr5_2 | five_prime_UTR | 40367944 | 40368015 | 40367944 | ID=Msa0770200-mRNA-1:five_prime_utr;Parent=Msa0770200-mRNA-1 |
| chr5_2 | CDS | 40368016 | 40368091 | 40368016 | ID=Msa0770200-mRNA-1:cds;Parent=Msa0770200-mRNA-1 |
| chr5_2 | CDS | 40368178 | 40368248 | 40368178 | ID=Msa0770200-mRNA-1:cds;Parent=Msa0770200-mRNA-1 |
| chr5_2 | CDS | 40368681 | 40368805 | 40368681 | ID=Msa0770200-mRNA-1:cds;Parent=Msa0770200-mRNA-1 |
| chr5_2 | CDS | 40372428 | 40372488 | 40372428 | ID=Msa0770200-mRNA-1:cds;Parent=Msa0770200-mRNA-1 |
| chr5_2 | CDS | 40373407 | 40373463 | 40373407 | ID=Msa0770200-mRNA-1:cds;Parent=Msa0770200-mRNA-1 |
| chr5_2 | three_prime_UTR | 40373464 | 40373702 | 40373464 | ID=Msa0770200-mRNA-1:three_prime_utr;Parent=Msa0770200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
