Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08512.t1 | XP_013444537.1 | 93.8 | 96 | 6 | 0 | 1 | 96 | 56 | 151 | 8.00E-44 | 186 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08512.t1 | Q8LCA1 | 68.6 | 102 | 26 | 2 | 1 | 96 | 54 | 155 | 8.4e-34 | 144.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08512.t1 | I3SWC2 | 93.8 | 96 | 6 | 0 | 1 | 96 | 56 | 151 | 5.8e-44 | 186.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene08512 | 0.872513 | 3.00E-67 | -1.69E-46 |
| MS.gene049171 | MS.gene08512 | 0.865041 | 7.87E-65 | -1.69E-46 |
| MS.gene049173 | MS.gene08512 | 0.851764 | 7.18E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene08512 | 0.894977 | 1.48E-75 | -1.69E-46 |
| MS.gene049222 | MS.gene08512 | 0.895097 | 1.32E-75 | -1.69E-46 |
| MS.gene049232 | MS.gene08512 | 0.817435 | 3.30E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene08512 | 0.905119 | 6.01E-80 | -1.69E-46 |
| MS.gene049320 | MS.gene08512 | 0.922071 | 1.58E-88 | -1.69E-46 |
| MS.gene049369 | MS.gene08512 | 0.814682 | 1.36E-51 | -1.69E-46 |
| MS.gene04939 | MS.gene08512 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene08512 | 0.878163 | 3.51E-69 | -1.69E-46 |
| MS.gene049609 | MS.gene08512 | 0.916708 | 1.29E-85 | -1.69E-46 |
| MS.gene049615 | MS.gene08512 | 0.834287 | 3.27E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene08512 | 0.81359 | 2.37E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene08512 | 0.835383 | 1.73E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene08512 | 0.845697 | 3.45E-59 | -1.69E-46 |
| MS.gene049662 | MS.gene08512 | 0.830278 | 3.21E-55 | -1.69E-46 |
| MS.gene049760 | MS.gene08512 | 0.802054 | 6.73E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene08512 | 0.896833 | 2.52E-76 | -1.69E-46 |
| MS.gene050076 | MS.gene08512 | 0.85652 | 3.04E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene08512 | 0.853202 | 2.79E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene08512 | 0.891673 | 3.20E-74 | -1.69E-46 |
| MS.gene050165 | MS.gene08512 | 0.870728 | 1.17E-66 | -1.69E-46 |
| MS.gene050323 | MS.gene08512 | 0.808117 | 3.62E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene08512 | 0.873587 | 1.31E-67 | -1.69E-46 |
| MS.gene050353 | MS.gene08512 | -0.802481 | 5.50E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene08512 | 0.886317 | 3.80E-72 | -1.69E-46 |
| MS.gene050444 | MS.gene08512 | 0.816543 | 5.24E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene08512 | 0.871112 | 8.76E-67 | -1.69E-46 |
| MS.gene050518 | MS.gene08512 | 0.883449 | 4.45E-71 | -1.69E-46 |
| MS.gene050520 | MS.gene08512 | 0.810905 | 9.14E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene08512 | 0.864626 | 1.06E-64 | -1.69E-46 |
| MS.gene050577 | MS.gene08512 | 0.85425 | 1.40E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene08512 | 0.884964 | 1.22E-71 | -1.69E-46 |
| MS.gene050612 | MS.gene08512 | 0.873605 | 1.29E-67 | -1.69E-46 |
| MS.gene050662 | MS.gene08512 | 0.826012 | 3.43E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene08512 | 0.817042 | 4.05E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene08512 | 0.872961 | 2.13E-67 | -1.69E-46 |
| MS.gene050686 | MS.gene08512 | 0.850898 | 1.26E-60 | -1.69E-46 |
| MS.gene050690 | MS.gene08512 | 0.841329 | 5.08E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene08512 | 0.909678 | 4.37E-82 | -1.69E-46 |
| MS.gene050747 | MS.gene08512 | 0.88653 | 3.16E-72 | -1.69E-46 |
| MS.gene050767 | MS.gene08512 | 0.86916 | 3.81E-66 | -1.69E-46 |
| MS.gene050770 | MS.gene08512 | 0.871777 | 5.28E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene08512 | 0.937683 | 2.32E-98 | -1.69E-46 |
| MS.gene050781 | MS.gene08512 | 0.816659 | 4.93E-52 | -1.69E-46 |
| MS.gene050783 | MS.gene08512 | 0.812156 | 4.88E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene08512 | 0.83731 | 5.60E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene08512 | 0.884006 | 2.77E-71 | -1.69E-46 |
| MS.gene050986 | MS.gene08512 | 0.874472 | 6.58E-68 | -1.69E-46 |
| MS.gene05100 | MS.gene08512 | 0.884978 | 1.21E-71 | -1.69E-46 |
| MS.gene05101 | MS.gene08512 | 0.818277 | 2.13E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene08512 | 0.879259 | 1.44E-69 | -1.69E-46 |
| MS.gene051167 | MS.gene08512 | -0.815437 | 9.25E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene08512 | 0.864264 | 1.38E-64 | -1.69E-46 |
| MS.gene051317 | MS.gene08512 | 0.808696 | 2.73E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene08512 | 0.873463 | 1.44E-67 | -1.69E-46 |
| MS.gene051551 | MS.gene08512 | 0.868005 | 9.00E-66 | -1.69E-46 |
| MS.gene051617 | MS.gene08512 | 0.810916 | 9.09E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene08512 | 0.880495 | 5.24E-70 | -1.69E-46 |
| MS.gene051692 | MS.gene08512 | 0.856723 | 2.65E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene08512 | 0.864929 | 8.54E-65 | -1.69E-46 |
| MS.gene051810 | MS.gene08512 | 0.89999 | 1.15E-77 | -1.69E-46 |
| MS.gene051838 | MS.gene08512 | 0.812371 | 4.39E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene08512 | 0.88236 | 1.11E-70 | -1.69E-46 |
| MS.gene051877 | MS.gene08512 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene08512 | 0.824691 | 7.04E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene08512 | 0.837442 | 5.19E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene08512 | 0.893617 | 5.32E-75 | -1.69E-46 |
| MS.gene052290 | MS.gene08512 | 0.829462 | 5.08E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene08512 | 0.821695 | 3.52E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene08512 | 0.816804 | 4.58E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene08512 | 0.883498 | 4.27E-71 | -1.69E-46 |
| MS.gene052421 | MS.gene08512 | 0.867867 | 9.97E-66 | -1.69E-46 |
| MS.gene052481 | MS.gene08512 | 0.852525 | 4.36E-61 | -1.69E-46 |
| MS.gene052482 | MS.gene08512 | 0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene08512 | 0.865507 | 5.62E-65 | -1.69E-46 |
| MS.gene052485 | MS.gene08512 | 0.821924 | 3.12E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene08512 | 0.836826 | 7.45E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene08512 | 0.84487 | 5.78E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene08512 | 0.857152 | 1.98E-62 | -1.69E-46 |
| MS.gene052505 | MS.gene08512 | 0.84165 | 4.18E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene08512 | 0.828254 | 9.96E-55 | -1.69E-46 |
| MS.gene052510 | MS.gene08512 | 0.805535 | 1.27E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene08512 | 0.897806 | 9.84E-77 | -1.69E-46 |
| MS.gene052670 | MS.gene08512 | 0.831083 | 2.04E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene08512 | 0.83466 | 2.64E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene08512 | 0.846293 | 2.38E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene08512 | 0.841456 | 4.70E-58 | -1.69E-46 |
| MS.gene052870 | MS.gene08512 | 0.804608 | 1.99E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene08512 | 0.813845 | 2.08E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene08512 | 0.857068 | 2.10E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene08512 | 0.804668 | 1.93E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene08512 | 0.828181 | 1.04E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene08512 | 0.846589 | 1.97E-59 | -1.69E-46 |
| MS.gene053018 | MS.gene08512 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene08512 | 0.857755 | 1.31E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene08512 | 0.889655 | 1.99E-73 | -1.69E-46 |
| MS.gene053107 | MS.gene08512 | 0.833175 | 6.20E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene08512 | 0.843461 | 1.38E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene08512 | 0.906472 | 1.43E-80 | -1.69E-46 |
| MS.gene053209 | MS.gene08512 | 0.820691 | 6.00E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene08512 | 0.948122 | 1.76E-106 | -1.69E-46 |
| MS.gene053286 | MS.gene08512 | 0.938298 | 8.48E-99 | -1.69E-46 |
| MS.gene053322 | MS.gene08512 | 0.898886 | 3.42E-77 | -1.69E-46 |
| MS.gene053436 | MS.gene08512 | 0.876809 | 1.04E-68 | -1.69E-46 |
| MS.gene053449 | MS.gene08512 | 0.821221 | 4.53E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene08512 | 0.832109 | 1.14E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene08512 | 0.902954 | 5.71E-79 | -1.69E-46 |
| MS.gene053579 | MS.gene08512 | 0.838676 | 2.50E-57 | -1.69E-46 |
| MS.gene053626 | MS.gene08512 | 0.840112 | 1.06E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene08512 | 0.909352 | 6.27E-82 | -1.69E-46 |
| MS.gene053813 | MS.gene08512 | 0.828911 | 6.91E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene08512 | 0.832278 | 1.04E-55 | -1.69E-46 |
| MS.gene053915 | MS.gene08512 | 0.836469 | 9.19E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene08512 | 0.872158 | 3.94E-67 | -1.69E-46 |
| MS.gene054003 | MS.gene08512 | 0.80705 | 6.11E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene08512 | 0.860388 | 2.14E-63 | -1.69E-46 |
| MS.gene054408 | MS.gene08512 | 0.853579 | 2.18E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene08512 | 0.849341 | 3.44E-60 | -1.69E-46 |
| MS.gene054600 | MS.gene08512 | 0.903104 | 4.89E-79 | -1.69E-46 |
| MS.gene054642 | MS.gene08512 | 0.929679 | 4.91E-93 | -1.69E-46 |
| MS.gene05470 | MS.gene08512 | 0.809213 | 2.11E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene08512 | 0.870451 | 1.44E-66 | -1.69E-46 |
| MS.gene054803 | MS.gene08512 | 0.869488 | 2.98E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene08512 | 0.872825 | 2.36E-67 | -1.69E-46 |
| MS.gene054927 | MS.gene08512 | 0.863781 | 1.95E-64 | -1.69E-46 |
| MS.gene054954 | MS.gene08512 | 0.867651 | 1.17E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene08512 | 0.899833 | 1.34E-77 | -1.69E-46 |
| MS.gene055116 | MS.gene08512 | 0.826013 | 3.42E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene08512 | -0.833643 | 4.74E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene08512 | 0.896357 | 3.99E-76 | -1.69E-46 |
| MS.gene055212 | MS.gene08512 | 0.873866 | 1.06E-67 | -1.69E-46 |
| MS.gene055224 | MS.gene08512 | 0.812347 | 4.44E-51 | -1.69E-46 |
| MS.gene055254 | MS.gene08512 | 0.828349 | 9.44E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene08512 | 0.802713 | 4.92E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene08512 | 0.881275 | 2.75E-70 | -1.69E-46 |
| MS.gene055362 | MS.gene08512 | 0.916481 | 1.69E-85 | -1.69E-46 |
| MS.gene055397 | MS.gene08512 | 0.873338 | 1.59E-67 | -1.69E-46 |
| MS.gene055412 | MS.gene08512 | 0.816561 | 5.19E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene08512 | 0.904768 | 8.69E-80 | -1.69E-46 |
| MS.gene055502 | MS.gene08512 | 0.896832 | 2.53E-76 | -1.69E-46 |
| MS.gene055577 | MS.gene08512 | 0.866292 | 3.17E-65 | -1.69E-46 |
| MS.gene055636 | MS.gene08512 | 0.845031 | 5.23E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene08512 | 0.844301 | 8.23E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene08512 | 0.893509 | 5.88E-75 | -1.69E-46 |
| MS.gene055722 | MS.gene08512 | 0.91241 | 2.01E-83 | -1.69E-46 |
| MS.gene055748 | MS.gene08512 | 0.800844 | 1.19E-48 | -1.69E-46 |
| MS.gene055750 | MS.gene08512 | 0.814507 | 1.49E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene08512 | 0.905541 | 3.85E-80 | -1.69E-46 |
| MS.gene055941 | MS.gene08512 | 0.868259 | 7.46E-66 | -1.69E-46 |
| MS.gene055956 | MS.gene08512 | -0.839552 | 1.48E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene08512 | 0.865211 | 6.96E-65 | -1.69E-46 |
| MS.gene056191 | MS.gene08512 | 0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene08512 | 0.911921 | 3.52E-83 | -1.69E-46 |
| MS.gene056407 | MS.gene08512 | 0.818736 | 1.68E-52 | -1.69E-46 |
| MS.gene056409 | MS.gene08512 | 0.808924 | 2.44E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene08512 | 0.817404 | 3.36E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene08512 | 0.812632 | 3.84E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene08512 | 0.812792 | 3.55E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene08512 | 0.832832 | 7.55E-56 | -1.69E-46 |
| MS.gene056449 | MS.gene08512 | 0.813412 | 2.59E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene08512 | 0.865408 | 6.03E-65 | -1.69E-46 |
| MS.gene056504 | MS.gene08512 | 0.840257 | 9.69E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene08512 | 0.851586 | 8.06E-61 | -1.69E-46 |
| MS.gene056511 | MS.gene08512 | 0.851734 | 7.32E-61 | -1.69E-46 |
| MS.gene056549 | MS.gene08512 | 0.815087 | 1.11E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene08512 | 0.821386 | 4.15E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene08512 | 0.820794 | 5.68E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene08512 | 0.822904 | 1.85E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene08512 | 0.926651 | 3.50E-91 | -1.69E-46 |
| MS.gene05666 | MS.gene08512 | 0.822351 | 2.48E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene08512 | 0.847694 | 9.84E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene08512 | 0.823506 | 1.34E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene08512 | 0.817648 | 2.96E-52 | -1.69E-46 |
| MS.gene056947 | MS.gene08512 | 0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene08512 | 0.86853 | 6.10E-66 | -1.69E-46 |
| MS.gene057048 | MS.gene08512 | 0.813837 | 2.09E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene08512 | 0.873547 | 1.35E-67 | -1.69E-46 |
| MS.gene057123 | MS.gene08512 | 0.811971 | 5.36E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene08512 | 0.802528 | 5.37E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene08512 | 0.911105 | 8.85E-83 | -1.69E-46 |
| MS.gene057146 | MS.gene08512 | 0.885599 | 7.07E-72 | -1.69E-46 |
| MS.gene057196 | MS.gene08512 | 0.819711 | 1.01E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene08512 | 0.805528 | 1.28E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene08512 | 0.904559 | 1.08E-79 | -1.69E-46 |
| MS.gene05735 | MS.gene08512 | 0.820814 | 5.62E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene08512 | 0.928612 | 2.26E-92 | -1.69E-46 |
| MS.gene057658 | MS.gene08512 | 0.838343 | 3.04E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene08512 | 0.827669 | 1.38E-54 | -1.69E-46 |
| MS.gene057775 | MS.gene08512 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene08512 | 0.810591 | 1.07E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene08512 | 0.853567 | 2.19E-61 | -1.69E-46 |
| MS.gene057856 | MS.gene08512 | 0.812114 | 4.99E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene08512 | 0.852691 | 3.91E-61 | -1.69E-46 |
| MS.gene058006 | MS.gene08512 | 0.853381 | 2.48E-61 | -1.69E-46 |
| MS.gene058019 | MS.gene08512 | 0.906714 | 1.10E-80 | -1.69E-46 |
| MS.gene058130 | MS.gene08512 | 0.855417 | 6.40E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene08512 | 0.807282 | 5.45E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene08512 | 0.834603 | 2.72E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene08512 | 0.871449 | 6.78E-67 | -1.69E-46 |
| MS.gene058338 | MS.gene08512 | 0.831571 | 1.55E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene08512 | 0.844587 | 6.89E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene08512 | 0.925274 | 2.29E-90 | -1.69E-46 |
| MS.gene058544 | MS.gene08512 | 0.887191 | 1.77E-72 | -1.69E-46 |
| MS.gene058660 | MS.gene08512 | 0.841066 | 5.95E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene08512 | 0.89127 | 4.63E-74 | -1.69E-46 |
| MS.gene058773 | MS.gene08512 | 0.870826 | 1.09E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene08512 | 0.853593 | 2.16E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene08512 | 0.864528 | 1.14E-64 | -1.69E-46 |
| MS.gene058840 | MS.gene08512 | -0.800086 | 1.70E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene08512 | 0.880086 | 7.33E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene08512 | 0.852488 | 4.47E-61 | -1.69E-46 |
| MS.gene059029 | MS.gene08512 | 0.891043 | 5.69E-74 | -1.69E-46 |
| MS.gene05913 | MS.gene08512 | 0.854081 | 1.56E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene08512 | 0.891276 | 4.60E-74 | -1.69E-46 |
| MS.gene059367 | MS.gene08512 | 0.831887 | 1.29E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene08512 | 0.812465 | 4.18E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene08512 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene08512 | 0.891687 | 3.16E-74 | -1.69E-46 |
| MS.gene059676 | MS.gene08512 | 0.815193 | 1.05E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene08512 | 0.905228 | 5.36E-80 | -1.69E-46 |
| MS.gene059688 | MS.gene08512 | 0.852213 | 5.35E-61 | -1.69E-46 |
| MS.gene059692 | MS.gene08512 | 0.842676 | 2.24E-58 | -1.69E-46 |
| MS.gene059695 | MS.gene08512 | 0.845972 | 2.91E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene08512 | 0.829528 | 4.89E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene08512 | 0.90893 | 9.97E-82 | -1.69E-46 |
| MS.gene059756 | MS.gene08512 | 0.867032 | 1.84E-65 | -1.69E-46 |
| MS.gene059801 | MS.gene08512 | 0.822354 | 2.48E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene08512 | 0.820935 | 5.27E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene08512 | 0.843604 | 1.26E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene08512 | 0.878541 | 2.58E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene08512 | 0.893185 | 7.95E-75 | -1.69E-46 |
| MS.gene060193 | MS.gene08512 | 0.856124 | 3.98E-62 | -1.69E-46 |
| MS.gene060341 | MS.gene08512 | 0.806352 | 8.58E-50 | -1.69E-46 |
| MS.gene060356 | MS.gene08512 | 0.80621 | 9.19E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene08512 | 0.834337 | 3.18E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene08512 | 0.863775 | 1.96E-64 | -1.69E-46 |
| MS.gene060703 | MS.gene08512 | 0.835054 | 2.10E-56 | -1.69E-46 |
| MS.gene060727 | MS.gene08512 | 0.815018 | 1.15E-51 | -1.69E-46 |
| MS.gene060728 | MS.gene08512 | 0.851876 | 6.67E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene08512 | 0.843163 | 1.66E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene08512 | 0.85918 | 4.94E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene08512 | 0.912544 | 1.73E-83 | -1.69E-46 |
| MS.gene060818 | MS.gene08512 | 0.857627 | 1.43E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene08512 | 0.885484 | 7.81E-72 | -1.69E-46 |
| MS.gene060837 | MS.gene08512 | 0.844724 | 6.33E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene08512 | 0.894534 | 2.25E-75 | -1.69E-46 |
| MS.gene060982 | MS.gene08512 | 0.820725 | 5.89E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene08512 | 0.887503 | 1.35E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene08512 | -0.80512 | 1.56E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene08512 | 0.851788 | 7.07E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene08512 | 0.884674 | 1.57E-71 | -1.69E-46 |
| MS.gene061171 | MS.gene08512 | 0.840787 | 7.05E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene08512 | 0.911463 | 5.91E-83 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAATTATGCATACCTTTC+TGG | 0.079710 | 8.1:-76220212 | None:intergenic |
| CCTGGAGTTCTTGAGTTAAT+AGG | 0.246781 | 8.1:+76219277 | MS.gene08512:CDS |
| GATAGACTTCCTTTGATTCC+TGG | 0.345188 | 8.1:+76219259 | MS.gene08512:CDS |
| GTTCTTGAGTTAATAGGAAT+TGG | 0.346748 | 8.1:+76219283 | MS.gene08512:CDS |
| AAAGATTGCTCGTGATGTTA+TGG | 0.420998 | 8.1:+76218861 | MS.gene08512:CDS |
| TAGCTAGTGTATTTGCACTA+TGG | 0.434144 | 8.1:+76219107 | MS.gene08512:CDS |
| GATGTTATGGTAATGGCAAC+AGG | 0.459632 | 8.1:+76218874 | MS.gene08512:CDS |
| TTTGCACTATGGAGCTCAGC+TGG | 0.465802 | 8.1:+76219118 | MS.gene08512:CDS |
| TGAAGATTCTTAACAAACTC+AGG | 0.486308 | 8.1:-76218931 | None:intergenic |
| TCAGTTGAGTCAACTTCTGT+TGG | 0.503744 | 8.1:-76218904 | None:intergenic |
| TAAATATGCAGTGGGTTCAT+TGG | 0.505381 | 8.1:+76219081 | MS.gene08512:CDS |
| CCTATTAACTCAAGAACTCC+AGG | 0.507872 | 8.1:-76219277 | None:intergenic |
| TTAATAGGAATTGGTTACAC+TGG | 0.524822 | 8.1:+76219292 | MS.gene08512:CDS |
| TAATAGGAATTGGTTACACT+GGG | 0.540472 | 8.1:+76219293 | MS.gene08512:CDS |
| TCAAGAACTCCAGGAATCAA+AGG | 0.544788 | 8.1:-76219268 | None:intergenic |
| TGCTCGTGATGTTATGGTAA+TGG | 0.557462 | 8.1:+76218867 | MS.gene08512:CDS |
| TTTGATGATAAATATGCAGT+GGG | 0.562064 | 8.1:+76219073 | MS.gene08512:CDS |
| ATTTGATGATAAATATGCAG+TGG | 0.570116 | 8.1:+76219072 | MS.gene08512:CDS |
| AATAGGAATTGGTTACACTG+GGG | 0.760636 | 8.1:+76219294 | MS.gene08512:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAACATAATTCT+AGG | - | chr8.1:76219031-76219050 | None:intergenic | 10.0% |
| !! | ATAAAAATGTATTACAATAT+CGG | - | chr8.1:76219761-76219780 | None:intergenic | 10.0% |
| !! | TATATGTATATATATATATG+AGG | + | chr8.1:76220093-76220112 | MS.gene08512:intron | 10.0% |
| !! | TATTTCAAAAAAAAAATACA+AGG | - | chr8.1:76219392-76219411 | None:intergenic | 10.0% |
| !!! | AATTATGTTATTTATTTTGT+TGG | + | chr8.1:76219033-76219052 | MS.gene08512:intron | 10.0% |
| !! | TCAATAATAAACATTAAGAA+GGG | - | chr8.1:76219008-76219027 | None:intergenic | 15.0% |
| !!! | TATTTTGTCATAAAATCAAA+TGG | - | chr8.1:76219938-76219957 | None:intergenic | 15.0% |
| !! | AAATATAGAAGATGAATACT+AGG | - | chr8.1:76220152-76220171 | None:intergenic | 20.0% |
| !! | CTTAGATTTAAATATATGAC+TGG | + | chr8.1:76219334-76219353 | MS.gene08512:intron | 20.0% |
| !! | GTCAATAATAAACATTAAGA+AGG | - | chr8.1:76219009-76219028 | None:intergenic | 20.0% |
| !! | TCTAATCTTATCAATTTGTA+AGG | - | chr8.1:76219801-76219820 | None:intergenic | 20.0% |
| !! | TTACAAATTGATAAGATTAG+AGG | + | chr8.1:76219800-76219819 | MS.gene08512:intron | 20.0% |
| !!! | TTTTTTTCCAGTAATTTCTA+GGG | + | chr8.1:76219878-76219897 | MS.gene08512:intron | 20.0% |
| ! | TAGGTTGTTAGAAATTGTAA+TGG | + | chr8.1:76218971-76218990 | MS.gene08512:intron | 25.0% |
| !! | ATTTGATGATAAATATGCAG+TGG | + | chr8.1:76219072-76219091 | MS.gene08512:CDS | 25.0% |
| !! | TATGAGGTATTATTCATCTT+TGG | + | chr8.1:76220109-76220128 | MS.gene08512:intron | 25.0% |
| !! | TTTGATGATAAATATGCAGT+GGG | + | chr8.1:76219073-76219092 | MS.gene08512:CDS | 25.0% |
| !!! | AATATCGCGTATTTGATTTT+TGG | + | chr8.1:76219365-76219384 | MS.gene08512:intron | 25.0% |
| !!! | GTTTTTTTCCAGTAATTTCT+AGG | + | chr8.1:76219877-76219896 | MS.gene08512:intron | 25.0% |
| !!! | TTGTTTTTTAAAATGATCCC+CGG | + | chr8.1:76219429-76219448 | MS.gene08512:intron | 25.0% |
| AAGAAAACCCTAGAAATTAC+TGG | - | chr8.1:76219888-76219907 | None:intergenic | 30.0% | |
| AAGCACAATAGTATTTGACA+TGG | - | chr8.1:76219673-76219692 | None:intergenic | 30.0% | |
| AATATCGGACTCTATCTATA+AGG | - | chr8.1:76219746-76219765 | None:intergenic | 30.0% | |
| AGCACAATAGTATTTGACAT+GGG | - | chr8.1:76219672-76219691 | None:intergenic | 30.0% | |
| ATCAAATGGCTTTCTTAAGA+TGG | - | chr8.1:76219924-76219943 | None:intergenic | 30.0% | |
| ATGTCAAATACTATTGTGCT+TGG | + | chr8.1:76219672-76219691 | MS.gene08512:intron | 30.0% | |
| CAATTACTTTCACTTGTAAC+AGG | + | chr8.1:76219231-76219250 | MS.gene08512:intron | 30.0% | |
| GCATCAAGTGAAATAATGTT+GGG | - | chr8.1:76219564-76219583 | None:intergenic | 30.0% | |
| GCTTTCTTAAGATGGTATTT+AGG | - | chr8.1:76219916-76219935 | None:intergenic | 30.0% | |
| GTTCTTGAGTTAATAGGAAT+TGG | + | chr8.1:76219283-76219302 | MS.gene08512:CDS | 30.0% | |
| TAATAGGAATTGGTTACACT+GGG | + | chr8.1:76219293-76219312 | MS.gene08512:CDS | 30.0% | |
| TGAAGATTCTTAACAAACTC+AGG | - | chr8.1:76218934-76218953 | None:intergenic | 30.0% | |
| TGCATCAAGTGAAATAATGT+TGG | - | chr8.1:76219565-76219584 | None:intergenic | 30.0% | |
| TTAATAGGAATTGGTTACAC+TGG | + | chr8.1:76219292-76219311 | MS.gene08512:CDS | 30.0% | |
| ! | ACTTGATGCATTGATATACA+TGG | + | chr8.1:76219575-76219594 | MS.gene08512:intron | 30.0% |
| ! | TATTTTGTTGGCATCATAGT+GGG | + | chr8.1:76219045-76219064 | MS.gene08512:intron | 30.0% |
| !! | TTATTTTGTTGGCATCATAG+TGG | + | chr8.1:76219044-76219063 | MS.gene08512:intron | 30.0% |
| !!! | TGTTTTTTAAAATGATCCCC+GGG | + | chr8.1:76219430-76219449 | MS.gene08512:intron | 30.0% |
| AAAGATTGCTCGTGATGTTA+TGG | + | chr8.1:76218861-76218880 | MS.gene08512:CDS | 35.0% | |
| AATAGGAATTGGTTACACTG+GGG | + | chr8.1:76219294-76219313 | MS.gene08512:CDS | 35.0% | |
| ACAATAGTATTTGACATGGG+GGG | - | chr8.1:76219669-76219688 | None:intergenic | 35.0% | |
| ATCAAATACGCGATATTTGC+AGG | - | chr8.1:76219362-76219381 | None:intergenic | 35.0% | |
| ATTGACATATAGATAGGGGA+TGG | + | chr8.1:76219698-76219717 | MS.gene08512:intron | 35.0% | |
| CAAGAAGCTGTATGATACAT+AGG | + | chr8.1:76218952-76218971 | MS.gene08512:intron | 35.0% | |
| CACAATAGTATTTGACATGG+GGG | - | chr8.1:76219670-76219689 | None:intergenic | 35.0% | |
| CCTGCATTGAATAGTGTATA+AGG | - | chr8.1:76219613-76219632 | None:intergenic | 35.0% | |
| CCTTATACACTATTCAATGC+AGG | + | chr8.1:76219610-76219629 | MS.gene08512:intron | 35.0% | |
| GCACAATAGTATTTGACATG+GGG | - | chr8.1:76219671-76219690 | None:intergenic | 35.0% | |
| TAGCTAGTGTATTTGCACTA+TGG | + | chr8.1:76219107-76219126 | MS.gene08512:CDS | 35.0% | |
| TCAAATACGCGATATTTGCA+GGG | - | chr8.1:76219361-76219380 | None:intergenic | 35.0% | |
| TTCTATATTTCACCTTGCAG+TGG | + | chr8.1:76220162-76220181 | MS.gene08512:intron | 35.0% | |
| ! | GCATTGATATACATGGTTGA+TGG | + | chr8.1:76219582-76219601 | MS.gene08512:intron | 35.0% |
| ! | GGTGCATTGACATATAGATA+GGG | + | chr8.1:76219693-76219712 | MS.gene08512:intron | 35.0% |
| ! | GTGCATTGACATATAGATAG+GGG | + | chr8.1:76219694-76219713 | MS.gene08512:intron | 35.0% |
| ! | TAAATATGCAGTGGGTTCAT+TGG | + | chr8.1:76219081-76219100 | MS.gene08512:CDS | 35.0% |
| ! | TGGTGCATTGACATATAGAT+AGG | + | chr8.1:76219692-76219711 | MS.gene08512:intron | 35.0% |
| !! | GATGGCCTTATAGAAGATAT+GGG | + | chr8.1:76219716-76219735 | MS.gene08512:intron | 35.0% |
| AATAGTATTTGACATGGGGG+GGG | - | chr8.1:76219667-76219686 | None:intergenic | 40.0% | |
| ACACTATTCAATGCAGGACT+TGG | + | chr8.1:76219616-76219635 | MS.gene08512:intron | 40.0% | |
| CAATAGTATTTGACATGGGG+GGG | - | chr8.1:76219668-76219687 | None:intergenic | 40.0% | |
| CCTATTAACTCAAGAACTCC+AGG | - | chr8.1:76219280-76219299 | None:intergenic | 40.0% | |
| CCTGGAGTTCTTGAGTTAAT+AGG | + | chr8.1:76219277-76219296 | MS.gene08512:CDS | 40.0% | |
| GATAGACTTCCTTTGATTCC+TGG | + | chr8.1:76219259-76219278 | MS.gene08512:CDS | 40.0% | |
| GCCATCCCATATCTTCTATA+AGG | - | chr8.1:76219724-76219743 | None:intergenic | 40.0% | |
| GCCTTATAGAAGATATGGGA+TGG | + | chr8.1:76219720-76219739 | MS.gene08512:intron | 40.0% | |
| GTCCATTTAAGCTGATAGGT+GGG | + | chr8.1:76219452-76219471 | MS.gene08512:intron | 40.0% | |
| TCAAGAACTCCAGGAATCAA+AGG | - | chr8.1:76219271-76219290 | None:intergenic | 40.0% | |
| TCAGTTGAGTCAACTTCTGT+TGG | - | chr8.1:76218907-76218926 | None:intergenic | 40.0% | |
| TGCTCGTGATGTTATGGTAA+TGG | + | chr8.1:76218867-76218886 | MS.gene08512:CDS | 40.0% | |
| !! | GATATACATGGTTGATGGTC+AGG | + | chr8.1:76219587-76219606 | MS.gene08512:intron | 40.0% |
| !! | GATGTTATGGTAATGGCAAC+AGG | + | chr8.1:76218874-76218893 | MS.gene08512:CDS | 40.0% |
| !! | GGATGGCCTTATAGAAGATA+TGG | + | chr8.1:76219715-76219734 | MS.gene08512:intron | 40.0% |
| ATAGTATTTGACATGGGGGG+GGG | - | chr8.1:76219666-76219685 | None:intergenic | 45.0% | |
| CCTATCAGCTTAAATGGACC+CGG | - | chr8.1:76219451-76219470 | None:intergenic | 45.0% | |
| CTATCAGCTTAAATGGACCC+GGG | - | chr8.1:76219450-76219469 | None:intergenic | 45.0% | |
| CTCCCACCTATCAGCTTAAA+TGG | - | chr8.1:76219457-76219476 | None:intergenic | 45.0% | |
| CTTGTATGCAAACCACTGCA+AGG | - | chr8.1:76220177-76220196 | None:intergenic | 45.0% | |
| GGTCCATTTAAGCTGATAGG+TGG | + | chr8.1:76219451-76219470 | MS.gene08512:intron | 45.0% | |
| TATCAGCTTAAATGGACCCG+GGG | - | chr8.1:76219449-76219468 | None:intergenic | 45.0% | |
| !!! | GAGCTCAGCTGGTTTTATCT+CGG | + | chr8.1:76219129-76219148 | MS.gene08512:CDS | 45.0% |
| CCGGGTCCATTTAAGCTGAT+AGG | + | chr8.1:76219448-76219467 | MS.gene08512:intron | 50.0% | |
| TAGTATTTGACATGGGGGGG+GGG | - | chr8.1:76219665-76219684 | None:intergenic | 50.0% | |
| TTTGCACTATGGAGCTCAGC+TGG | + | chr8.1:76219118-76219137 | MS.gene08512:CDS | 50.0% | |
| AGTATTTGACATGGGGGGGG+GGG | - | chr8.1:76219664-76219683 | None:intergenic | 55.0% | |
| GTATTTGACATGGGGGGGGG+GGG | - | chr8.1:76219663-76219682 | None:intergenic | 60.0% | |
| TATTTGACATGGGGGGGGGG+GGG | - | chr8.1:76219662-76219681 | None:intergenic | 60.0% | |
| ATTTGACATGGGGGGGGGGG+GGG | - | chr8.1:76219661-76219680 | None:intergenic | 65.0% | |
| TTTGACATGGGGGGGGGGGG+GGG | - | chr8.1:76219660-76219679 | None:intergenic | 70.0% | |
| TTGACATGGGGGGGGGGGGG+GGG | - | chr8.1:76219659-76219678 | None:intergenic | 75.0% | |
| ! | TGACATGGGGGGGGGGGGGG+GGG | - | chr8.1:76219658-76219677 | None:intergenic | 80.0% |
| ! | ACATGGGGGGGGGGGGGGGG+GGG | - | chr8.1:76219656-76219675 | None:intergenic | 85.0% |
| ! | GACATGGGGGGGGGGGGGGG+GGG | - | chr8.1:76219657-76219676 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 76218857 | 76220219 | 76218857 | ID=MS.gene08512 |
| chr8.1 | mRNA | 76218857 | 76220219 | 76218857 | ID=MS.gene08512.t1;Parent=MS.gene08512 |
| chr8.1 | exon | 76218857 | 76218960 | 76218857 | ID=MS.gene08512.t1.exon1;Parent=MS.gene08512.t1 |
| chr8.1 | CDS | 76218857 | 76218960 | 76218857 | ID=cds.MS.gene08512.t1;Parent=MS.gene08512.t1 |
| chr8.1 | exon | 76219064 | 76219150 | 76219064 | ID=MS.gene08512.t1.exon2;Parent=MS.gene08512.t1 |
| chr8.1 | CDS | 76219064 | 76219150 | 76219064 | ID=cds.MS.gene08512.t1;Parent=MS.gene08512.t1 |
| chr8.1 | exon | 76219253 | 76219315 | 76219253 | ID=MS.gene08512.t1.exon3;Parent=MS.gene08512.t1 |
| chr8.1 | CDS | 76219253 | 76219315 | 76219253 | ID=cds.MS.gene08512.t1;Parent=MS.gene08512.t1 |
| chr8.1 | exon | 76220182 | 76220219 | 76220182 | ID=MS.gene08512.t1.exon4;Parent=MS.gene08512.t1 |
| chr8.1 | CDS | 76220182 | 76220219 | 76220182 | ID=cds.MS.gene08512.t1;Parent=MS.gene08512.t1 |
| Gene Sequence |
| Protein sequence |
