AlfalfaGEDB | MS.gene56592

M. sativa cultivar XinJiangDaYe / MS.gene56592

KEGG: -
GO: -
PFAM: PF08387.13

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56592.t1	XP_013464451.1	92.1	302	24	0	1	302	150	451	4.10E-155	557.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56592.t1	Q9LUC4	25.8	306	186	8	5	296	163	441	8.8e-13	75.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56592.t1	A0A072VA50	92.1	302	24	0	1	302	150	451	3.0e-155	557.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene56592	0.810513	1.11E-50	-1.69E-46
MS.gene049153	MS.gene56592	0.827331	1.66E-54	-1.69E-46
MS.gene049758	MS.gene56592	0.808188	3.50E-50	-1.69E-46
MS.gene049910	MS.gene56592	0.820337	7.23E-53	-1.69E-46
MS.gene050301	MS.gene56592	0.839592	1.44E-57	-1.69E-46
MS.gene050464	MS.gene56592	0.803682	3.10E-49	-1.69E-46
MS.gene050642	MS.gene56592	0.812443	4.23E-51	-1.69E-46
MS.gene050670	MS.gene56592	0.827438	1.56E-54	-1.69E-46
MS.gene050971	MS.gene56592	0.810663	1.03E-50	-1.69E-46
MS.gene051360	MS.gene56592	0.823785	1.15E-53	-1.69E-46
MS.gene051525	MS.gene56592	0.817548	3.12E-52	-1.69E-46
MS.gene051860	MS.gene56592	0.848851	4.71E-60	-1.69E-46
MS.gene051983	MS.gene56592	0.820991	5.12E-53	-1.69E-46
MS.gene052011	MS.gene56592	-0.833334	5.66E-56	-1.69E-46
MS.gene052077	MS.gene56592	0.826118	3.23E-54	-1.69E-46
MS.gene052188	MS.gene56592	0.861289	1.14E-63	-1.69E-46
MS.gene052253	MS.gene56592	0.866492	2.74E-65	-1.69E-46
MS.gene052255	MS.gene56592	0.819592	1.07E-52	-1.69E-46
MS.gene052310	MS.gene56592	0.807636	4.59E-50	-1.69E-46
MS.gene052340	MS.gene56592	0.855195	7.42E-62	-1.69E-46
MS.gene052485	MS.gene56592	0.815664	8.23E-52	-1.69E-46
MS.gene053169	MS.gene56592	0.804376	2.23E-49	-1.69E-46
MS.gene05316	MS.gene56592	0.815649	8.30E-52	-1.69E-46
MS.gene053557	MS.gene56592	0.808034	3.78E-50	-1.69E-46
MS.gene053758	MS.gene56592	0.815145	1.07E-51	-1.69E-46
MS.gene053836	MS.gene56592	0.842488	2.51E-58	-1.69E-46
MS.gene054010	MS.gene56592	0.800995	1.11E-48	-1.69E-46
MS.gene054011	MS.gene56592	0.807254	5.53E-50	-1.69E-46
MS.gene054012	MS.gene56592	0.800095	1.69E-48	-1.69E-46
MS.gene054183	MS.gene56592	0.821197	4.59E-53	-1.69E-46
MS.gene054349	MS.gene56592	0.824747	6.83E-54	-1.69E-46
MS.gene054556	MS.gene56592	0.840332	9.27E-58	-1.69E-46
MS.gene054930	MS.gene56592	0.80745	5.03E-50	-1.69E-46
MS.gene055116	MS.gene56592	0.831478	1.63E-55	-1.69E-46
MS.gene055422	MS.gene56592	0.820838	5.55E-53	-1.69E-46
MS.gene05553	MS.gene56592	0.824322	8.60E-54	-1.69E-46
MS.gene055604	MS.gene56592	0.80799	3.86E-50	-1.69E-46
MS.gene055666	MS.gene56592	0.828449	8.93E-55	-1.69E-46
MS.gene056191	MS.gene56592	0.818983	1.47E-52	-1.69E-46
MS.gene056447	MS.gene56592	0.816871	4.42E-52	-1.69E-46
MS.gene056659	MS.gene56592	0.808337	3.26E-50	-1.69E-46
MS.gene056979	MS.gene56592	0.827395	1.60E-54	-1.69E-46
MS.gene05702	MS.gene56592	0.802535	5.36E-49	-1.69E-46
MS.gene057448	MS.gene56592	0.816814	4.55E-52	-1.69E-46
MS.gene057449	MS.gene56592	0.806337	8.64E-50	-1.69E-46
MS.gene057450	MS.gene56592	0.813622	2.33E-51	-1.69E-46
MS.gene057469	MS.gene56592	0.825051	5.79E-54	-1.69E-46
MS.gene057749	MS.gene56592	0.83074	2.48E-55	-1.69E-46
MS.gene057823	MS.gene56592	0.825762	3.93E-54	-1.69E-46
MS.gene057825	MS.gene56592	0.805871	1.08E-49	-1.69E-46
MS.gene058002	MS.gene56592	0.846568	2.00E-59	-1.69E-46
MS.gene058007	MS.gene56592	0.801975	6.99E-49	-1.69E-46
MS.gene05811	MS.gene56592	0.845267	4.52E-59	-1.69E-46
MS.gene058142	MS.gene56592	0.841583	4.35E-58	-1.69E-46
MS.gene05842	MS.gene56592	0.801022	1.10E-48	-1.69E-46
MS.gene058700	MS.gene56592	0.80842	3.13E-50	-1.69E-46
MS.gene058710	MS.gene56592	0.81085	9.39E-51	-1.69E-46
MS.gene05886	MS.gene56592	0.85717	1.96E-62	-1.69E-46
MS.gene058928	MS.gene56592	0.825384	4.83E-54	-1.69E-46
MS.gene05907	MS.gene56592	0.85086	1.29E-60	-1.69E-46
MS.gene059285	MS.gene56592	0.83342	5.39E-56	-1.69E-46
MS.gene059294	MS.gene56592	0.815499	8.96E-52	-1.69E-46
MS.gene059420	MS.gene56592	0.834525	2.85E-56	-1.69E-46
MS.gene059597	MS.gene56592	0.82474	6.85E-54	-1.69E-46
MS.gene059676	MS.gene56592	0.813138	2.98E-51	-1.69E-46
MS.gene059688	MS.gene56592	0.838642	2.55E-57	-1.69E-46
MS.gene059692	MS.gene56592	0.835388	1.73E-56	-1.69E-46
MS.gene059695	MS.gene56592	0.833766	4.42E-56	-1.69E-46
MS.gene05984	MS.gene56592	0.875709	2.49E-68	-1.69E-46
MS.gene059894	MS.gene56592	0.805156	1.53E-49	-1.69E-46
MS.gene060986	MS.gene56592	0.83944	1.58E-57	-1.69E-46
MS.gene061049	MS.gene56592	0.83506	2.09E-56	-1.69E-46
MS.gene061154	MS.gene56592	0.802686	4.99E-49	-1.69E-46
MS.gene061159	MS.gene56592	0.831276	1.83E-55	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene56592	MS.gene043123	PPI
MS.gene065516	MS.gene56592	PPI
MS.gene34704	MS.gene56592	PPI
MS.gene56592	MS.gene25418	PPI
MS.gene56592	MS.gene032296	PPI
MS.gene56592	MS.gene63104	PPI
MS.gene56592	MS.gene25449	PPI
MS.gene56592	MS.gene25296	PPI
MS.gene56592	MS.gene25451	PPI
MS.gene56592	MS.gene72962	PPI
MS.gene56592	MS.gene34802	PPI
MS.gene56592	MS.gene34706	PPI
MS.gene56592	MS.gene073176	PPI
MS.gene56592	MS.gene72952	PPI
MS.gene56592	MS.gene34766	PPI
MS.gene56592	MS.gene055882	PPI
MS.gene56592	MS.gene060769	PPI
MS.gene56592	MS.gene63095	PPI
MS.gene63210	MS.gene56592	PPI
MS.gene56592	MS.gene72956	PPI
MS.gene56592	MS.gene038427	PPI
MS.gene56592	MS.gene72961	PPI
MS.gene56592	MS.gene93027	PPI
MS.gene56592	MS.gene25299	PPI
MS.gene56592	MS.gene63105	PPI
MS.gene065234	MS.gene56592	PPI
MS.gene56592	MS.gene72963	PPI
MS.gene34753	MS.gene56592	PPI
MS.gene56592	MS.gene63259	PPI
MS.gene56592	MS.gene007876	PPI
MS.gene56592	MS.gene63218	PPI
MS.gene56592	MS.gene053312	PPI
MS.gene56592	MS.gene056517	PPI
MS.gene56592	MS.gene25348	PPI
MS.gene56592	MS.gene36065	PPI
MS.gene56592	MS.gene060771	PPI
MS.gene56592	MS.gene66626	PPI
MS.gene56592	MS.gene72958	PPI
MS.gene56592	MS.gene053313	PPI
MS.gene49513	MS.gene56592	PPI
MS.gene69850	MS.gene56592	PPI
MS.gene56592	MS.gene63223	PPI
MS.gene56592	MS.gene63185	PPI
MS.gene56592	MS.gene95710	PPI
MS.gene56592	MS.gene25450	PPI
MS.gene56592	MS.gene34216	PPI
MS.gene56592	MS.gene63214	PPI
MS.gene055883	MS.gene56592	PPI
MS.gene56592	MS.gene63257	PPI
MS.gene63217	MS.gene56592	PPI
MS.gene56592	MS.gene64988	PPI
MS.gene56592	MS.gene25352	PPI
MS.gene56592	MS.gene36067	PPI
MS.gene56592	MS.gene48656	PPI
MS.gene63177	MS.gene56592	PPI
MS.gene56592	MS.gene053311	PPI
MS.gene56592	MS.gene64984	PPI
MS.gene56592	MS.gene34215	PPI
MS.gene56592	MS.gene25298	PPI
MS.gene56592	MS.gene25448	PPI
MS.gene56592	MS.gene48654	PPI
MS.gene34707	MS.gene56592	PPI
MS.gene56592	MS.gene25344	PPI
MS.gene56592	MS.gene34739	PPI
MS.gene25396	MS.gene56592	PPI
MS.gene56592	MS.gene34801	PPI
MS.gene56592	MS.gene34737	PPI
MS.gene56592	MS.gene25347	PPI
MS.gene56592	MS.gene25412	PPI
MS.gene56592	MS.gene72957	PPI
MS.gene56592	MS.gene34703	PPI
MS.gene56592	MS.gene63094	PPI
MS.gene56592	MS.gene017193	PPI
MS.gene56592	MS.gene25386	PPI
MS.gene56592	MS.gene63221	PPI
MS.gene56592	MS.gene060770	PPI
MS.gene56592	MS.gene72955	PPI
MS.gene56592	MS.gene63111	PPI
MS.gene56592	MS.gene34804	PPI
MS.gene34738	MS.gene56592	PPI
MS.gene56592	MS.gene055877	PPI
MS.gene56592	MS.gene72954	PPI
MS.gene56592	MS.gene63222	PPI
MS.gene56592	MS.gene34730	PPI
MS.gene56592	MS.gene99982	PPI
MS.gene56592	MS.gene63260	PPI
MS.gene56592	MS.gene34733	PPI
MS.gene56592	MS.gene99983	PPI
MS.gene56592	MS.gene72960	PPI
MS.gene56592	MS.gene34825	PPI
MS.gene56592	MS.gene062537	PPI
MS.gene56592	MS.gene99980	PPI
MS.gene055880	MS.gene56592	PPI
MS.gene56592	MS.gene25297	PPI
MS.gene56592	MS.gene043122	PPI
MS.gene56592	MS.gene25353	PPI
MS.gene25410	MS.gene56592	PPI
MS.gene63113	MS.gene56592	PPI
MS.gene56592	MS.gene067702	PPI
MS.gene56592	MS.gene36066	PPI
MS.gene56592	MS.gene63256	PPI
MS.gene56592	MS.gene34740	PPI
MS.gene56592	MS.gene64989	PPI
MS.gene56592	MS.gene34735	PPI
MS.gene56592	MS.gene032295	PPI
MS.gene56592	MS.gene061286	PPI
MS.gene56592	MS.gene92095	PPI
MS.gene56592	MS.gene25415	PPI
MS.gene56592	MS.gene007875	PPI
MS.gene56592	MS.gene062282	PPI
MS.gene56592	MS.gene062526	PPI
MS.gene56592	MS.gene61631	PPI
MS.gene56592	MS.gene63212	PPI
MS.gene56592	MS.gene64992	PPI
MS.gene63213	MS.gene56592	PPI
MS.gene34824	MS.gene56592	PPI
MS.gene64993	MS.gene56592	PPI
MS.gene25411	MS.gene56592	PPI
MS.gene56592	MS.gene63112	PPI
MS.gene72959	MS.gene56592	PPI
MS.gene56592	MS.gene63224	PPI
MS.gene34731	MS.gene56592	PPI
MS.gene56592	MS.gene34736	PPI
MS.gene56592	MS.gene25414	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56592.t1	MTR_2g072530	92.053	302	24	0	1	302	150	451	0.0	574
MS.gene56592.t1	MTR_2g072550	52.239	268	56	6	35	302	31	226	1.85e-73	225
MS.gene56592.t1	MTR_7g094030	32.903	310	181	10	4	297	164	462	8.75e-37	137
MS.gene56592.t1	MTR_2g072720	31.511	311	184	11	1	297	182	477	3.02e-32	124
MS.gene56592.t1	MTR_2g082880	30.690	290	180	8	3	283	145	422	3.68e-30	118
MS.gene56592.t1	MTR_2g072730	30.952	294	190	8	1	287	158	445	6.74e-30	118
MS.gene56592.t1	MTR_1g025870	31.944	288	172	10	4	281	230	503	2.07e-29	117
MS.gene56592.t1	MTR_1g115250	31.535	241	152	6	47	282	201	433	3.79e-26	107
MS.gene56592.t1	MTR_2g082850	34.450	209	117	6	3	201	166	364	5.66e-26	106
MS.gene56592.t1	MTR_2g082800	32.129	249	158	7	2	249	162	400	2.48e-23	99.4
MS.gene56592.t1	MTR_4g032845	29.832	238	156	7	32	263	176	408	6.65e-23	98.2
MS.gene56592.t1	MTR_5g005700	29.352	293	193	7	11	297	208	492	3.69e-21	93.6
MS.gene56592.t1	MTR_6g022350	28.947	266	172	9	1	260	204	458	2.13e-19	88.6
MS.gene56592.t1	MTR_4g080590	26.923	286	197	8	6	285	163	442	2.00e-16	79.7
MS.gene56592.t1	MTR_2g072710	26.961	204	128	6	103	298	5	195	4.47e-16	75.5
MS.gene56592.t1	MTR_2g067210	31.905	210	125	8	4	204	202	402	6.43e-16	78.2
MS.gene56592.t1	MTR_7g094050	36.585	123	75	2	164	285	2	122	5.25e-14	68.2
MS.gene56592.t1	MTR_5g007090	28.214	280	162	10	10	285	212	456	2.18e-13	70.5
MS.gene56592.t1	MTR_4g080787	25.566	309	202	10	1	296	170	463	2.51e-13	70.5
MS.gene56592.t1	MTR_8g006910	28.000	250	154	9	11	251	199	431	1.90e-11	64.7
MS.gene56592.t1	MTR_7g023310	24.164	269	187	7	5	262	165	427	3.50e-11	63.9
MS.gene56592.t1	MTR_5g007110	36.364	88	54	2	176	263	2	87	7.23e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene56592.t1	AT3G14710	24.590	305	197	7	2	296	160	441	1.06e-14	74.3

Find 36 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAAAGTATTTCAGTTTAA+AGG	0.139696	2.1:-26111692	MS.gene56592:CDS
AAACAAGAGTGTTAAGAATA+GGG	0.284563	2.1:+26112196	None:intergenic
GCGTCGACTATGAACCTTAA+TGG	0.307360	2.1:+26112642	None:intergenic
ATCATGTAAATATGCCATTA+AGG	0.324990	2.1:-26112656	MS.gene56592:CDS
TGTTGTTGATGAAGATAAAA+AGG	0.327183	2.1:-26112533	MS.gene56592:CDS
TTCACCAATCTGCCTGTCTT+TGG	0.335476	2.1:-26112285	MS.gene56592:CDS
AAAACAAGAGTGTTAAGAAT+AGG	0.349193	2.1:+26112195	None:intergenic
AAACTAATGTTCTGTGTTGT+TGG	0.384561	2.1:+26112736	None:intergenic
GAACGAGCACGATCTTTGTT+TGG	0.397360	2.1:-26111660	MS.gene56592:CDS
TACATGATTCATTTGAATGA+TGG	0.398273	2.1:+26112671	None:intergenic
GCTTCAAACACTTTGAGAAT+CGG	0.411946	2.1:+26112775	None:intergenic
CTTCAAACACTTTGAGAATC+GGG	0.419619	2.1:+26112776	None:intergenic
TGTTGATTTGAAGAAAGTTA+AGG	0.423111	2.1:-26111561	MS.gene56592:CDS
TGTTAAGAATAGGGGAATTG+TGG	0.424474	2.1:+26112205	None:intergenic
CCTTCCAAAGACAGGCAGAT+TGG	0.430732	2.1:+26112281	None:intergenic
CTCAAAGTGTTTGAAGCTAG+AGG	0.446938	2.1:-26112769	MS.gene56592:CDS
GTTGGCAGATGCAGCAATCA+TGG	0.478397	2.1:-26111627	MS.gene56592:CDS
ATCGAAAACTTCTCAAGTAA+AGG	0.483526	2.1:+26112706	None:intergenic
TAAGTTAACCTTCCAAAGAC+AGG	0.506614	2.1:+26112273	None:intergenic
TTGCAGTTGTTAGAACACTT+TGG	0.513678	2.1:+26111521	None:intergenic
AACTTATCTGCAACTAAATG+AGG	0.518407	2.1:-26112256	MS.gene56592:CDS
CCAATCTGCCTGTCTTTGGA+AGG	0.521176	2.1:-26112281	MS.gene56592:CDS
AACAAGAGTGTTAAGAATAG+GGG	0.527875	2.1:+26112197	None:intergenic
CTAACAGATTTCTCCTACGA+GGG	0.532743	2.1:-26112619	MS.gene56592:CDS
AACAGAAGCATTACGAATTG+AGG	0.535694	2.1:+26112561	None:intergenic
CCTCGTAGGAGAAATCTGTT+AGG	0.536945	2.1:+26112620	None:intergenic
GGAGATGATGATGATATCAC+CGG	0.566062	2.1:-26111606	MS.gene56592:CDS
CTGCAACTAAATGAGGTCAC+TGG	0.573768	2.1:-26112249	MS.gene56592:CDS
TCAAAGTGTTTGAAGCTAGA+GGG	0.585679	2.1:-26112768	MS.gene56592:CDS
TTGTTTGGTAAAATTCGTGT+TGG	0.601366	2.1:-26111645	MS.gene56592:CDS
AGATGTCTTTACTTCTGCAA+CGG	0.610724	2.1:-26111738	MS.gene56592:CDS
TTGAAGCTAGAGGGTGCGAA+TGG	0.623897	2.1:-26112759	MS.gene56592:CDS
TTGTTCAACATCACCCTCGT+AGG	0.671848	2.1:+26112606	None:intergenic
TCTCAAACAAATCGATAACG+TGG	0.686009	2.1:-26112473	MS.gene56592:CDS
CCTAACAGATTTCTCCTACG+AGG	0.694192	2.1:-26112620	MS.gene56592:CDS
AAGCTTGACAGAAAGCAGTG+AGG	0.745455	2.1:+26111713	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTAAATTTCTTTTAACAAA+AGG	+	chr2.1:26112245-26112264	None:intergenic	10.0%
!!!	AGTGTTTATTTTTTTGAAGA+AGG	+	chr2.1:26112341-26112360	None:intergenic	20.0%
!!!	GTTTTACTTAATGTAAGTTT+AGG	-	chr2.1:26112211-26112230	MS.gene56592:CDS	20.0%
!!!	TTCAAAGTATTTCAGTTTAA+AGG	-	chr2.1:26112696-26112715	MS.gene56592:CDS	20.0%
!	AACATAACTGCTTATGTATA+AGG	+	chr2.1:26112509-26112528	None:intergenic	25.0%
!	ATCATGTAAATATGCCATTA+AGG	-	chr2.1:26111732-26111751	MS.gene56592:CDS	25.0%
!	CATGACACAAAAAAATTTCA+GGG	-	chr2.1:26112609-26112628	MS.gene56592:CDS	25.0%
!	GAGTTTATGAAAACAACTTA+AGG	+	chr2.1:26112409-26112428	None:intergenic	25.0%
!	TACATGATTCATTTGAATGA+TGG	+	chr2.1:26111720-26111739	None:intergenic	25.0%
!	TCATGACACAAAAAAATTTC+AGG	-	chr2.1:26112608-26112627	MS.gene56592:CDS	25.0%
!	TGAAGATAAAAAGGATAGAA+TGG	-	chr2.1:26111864-26111883	MS.gene56592:intron	25.0%
!	TTCAAAAACTTAGCATTTCT+GGG	-	chr2.1:26111536-26111555	MS.gene56592:CDS	25.0%
!!	AGTTATATCTTTTGAACAAG+TGG	+	chr2.1:26111584-26111603	None:intergenic	25.0%
!!	ATTAAGTTGTTTATCCAGAA+AGG	-	chr2.1:26112540-26112559	MS.gene56592:CDS	25.0%
!!	TGTTGTTGATGAAGATAAAA+AGG	-	chr2.1:26111855-26111874	MS.gene56592:intron	25.0%
!!	TTAAGTTGTTTATCCAGAAA+GGG	-	chr2.1:26112541-26112560	MS.gene56592:CDS	25.0%
!!	TTTCTTTTACGATACATGAA+CGG	-	chr2.1:26111972-26111991	MS.gene56592:intron	25.0%
!!!	AAAACAAGAGTGTTAAGAAT+AGG	+	chr2.1:26112196-26112215	None:intergenic	25.0%
!!!	AAACAAGAGTGTTAAGAATA+GGG	+	chr2.1:26112195-26112214	None:intergenic	25.0%
!!!	GCTAAAGTTATTGTTTTACA+AGG	-	chr2.1:26111942-26111961	MS.gene56592:intron	25.0%
!!!	TGTTGATTTGAAGAAAGTTA+AGG	-	chr2.1:26112827-26112846	MS.gene56592:CDS	25.0%
	AAACTAATGTTCTGTGTTGT+TGG	+	chr2.1:26111655-26111674	None:intergenic	30.0%
	AACTTATCTGCAACTAAATG+AGG	-	chr2.1:26112132-26112151	MS.gene56592:intron	30.0%
	AAGGATAGAATGGAAAAACT+TGG	-	chr2.1:26111874-26111893	MS.gene56592:intron	30.0%
	ATCGAAAACTTCTCAAGTAA+AGG	+	chr2.1:26111685-26111704	None:intergenic	30.0%
	CTTCAAAAACTTAGCATTTC+TGG	-	chr2.1:26111535-26111554	MS.gene56592:CDS	30.0%
	TCAAAAACTTAGCATTTCTG+GGG	-	chr2.1:26111537-26111556	MS.gene56592:CDS	30.0%
	TTGTTTGGTAAAATTCGTGT+TGG	-	chr2.1:26112743-26112762	MS.gene56592:CDS	30.0%
!	AGAAGTTTTCGATAGCAATA+TGG	-	chr2.1:26111692-26111711	MS.gene56592:CDS	30.0%
!	CAGAAATGCTAAGTTTTTGA+AGG	+	chr2.1:26111537-26111556	None:intergenic	30.0%
!	TAAAATTTTCCTTGTCCTAC+AGG	-	chr2.1:26112057-26112076	MS.gene56592:intron	30.0%
!!	AACAAGAGTGTTAAGAATAG+GGG	+	chr2.1:26112194-26112213	None:intergenic	30.0%
!!	TGCTAAGTTTTTGAAGGTTT+TGG	+	chr2.1:26111531-26111550	None:intergenic	30.0%
	AGATGTCTTTACTTCTGCAA+CGG	-	chr2.1:26112650-26112669	MS.gene56592:CDS	35.0%
	GTGTTTAGCGTTGTTTAGAT+TGG	-	chr2.1:26112276-26112295	MS.gene56592:CDS	35.0%
	TAAGTTAACCTTCCAAAGAC+AGG	+	chr2.1:26112118-26112137	None:intergenic	35.0%
	TCTCAAACAAATCGATAACG+TGG	-	chr2.1:26111915-26111934	MS.gene56592:intron	35.0%
	TGTTAAGAATAGGGGAATTG+TGG	+	chr2.1:26112186-26112205	None:intergenic	35.0%
	TTGCAGTTGTTAGAACACTT+TGG	+	chr2.1:26112870-26112889	None:intergenic	35.0%
!	CTTCAAACACTTTGAGAATC+GGG	+	chr2.1:26111615-26111634	None:intergenic	35.0%
!	GCTTCAAACACTTTGAGAAT+CGG	+	chr2.1:26111616-26111635	None:intergenic	35.0%
!	TCAAAGTGTTTGAAGCTAGA+GGG	-	chr2.1:26111620-26111639	MS.gene56592:CDS	35.0%
!!	AACAGAAGCATTACGAATTG+AGG	+	chr2.1:26111830-26111849	None:intergenic	35.0%
!!	GTTGTTTTCATAAACTCTCG+AGG	-	chr2.1:26112412-26112431	MS.gene56592:intron	35.0%
!!	TTTTGGAGACAAACAGATAC+GGG	+	chr2.1:26111514-26111533	None:intergenic	35.0%
!!!	GTTTTGGAGACAAACAGATA+CGG	+	chr2.1:26111515-26111534	None:intergenic	35.0%
	CTAACAGATTTCTCCTACGA+GGG	-	chr2.1:26111769-26111788	MS.gene56592:intron	40.0%
	TACCATGCCTTAAAACCTGT+AGG	+	chr2.1:26112075-26112094	None:intergenic	40.0%
!	CTCAAAGTGTTTGAAGCTAG+AGG	-	chr2.1:26111619-26111638	MS.gene56592:CDS	40.0%
!	GGAGATGATGATGATATCAC+CGG	-	chr2.1:26112782-26112801	MS.gene56592:CDS	40.0%
!	TCCTTGTCCTACAGGTTTTA+AGG	-	chr2.1:26112065-26112084	MS.gene56592:intron	40.0%
!!!	TGATGATATCACCGGCTTTT+TGG	-	chr2.1:26112790-26112809	MS.gene56592:CDS	40.0%
	AAGCTTGACAGAAAGCAGTG+AGG	+	chr2.1:26112678-26112697	None:intergenic	45.0%
	CCTAACAGATTTCTCCTACG+AGG	-	chr2.1:26111768-26111787	MS.gene56592:intron	45.0%
	CCTCGTAGGAGAAATCTGTT+AGG	+	chr2.1:26111771-26111790	None:intergenic	45.0%
	CTGCAACTAAATGAGGTCAC+TGG	-	chr2.1:26112139-26112158	MS.gene56592:intron	45.0%
	GAACGAGCACGATCTTTGTT+TGG	-	chr2.1:26112728-26112747	MS.gene56592:CDS	45.0%
	GCCTTAAAACCTGTAGGACA+AGG	+	chr2.1:26112069-26112088	None:intergenic	45.0%
	TATGCAACGAAGACCCTTTC+TGG	+	chr2.1:26112557-26112576	None:intergenic	45.0%
	TTCACCAATCTGCCTGTCTT+TGG	-	chr2.1:26112103-26112122	MS.gene56592:intron	45.0%
	TTGTTCAACATCACCCTCGT+AGG	+	chr2.1:26111785-26111804	None:intergenic	45.0%
!!	GCGTCGACTATGAACCTTAA+TGG	+	chr2.1:26111749-26111768	None:intergenic	45.0%
!!!	GTCCTACAGGTTTTAAGGCA+TGG	-	chr2.1:26112070-26112089	MS.gene56592:intron	45.0%
	CCAATCTGCCTGTCTTTGGA+AGG	-	chr2.1:26112107-26112126	MS.gene56592:intron	50.0%
	CCTTCCAAAGACAGGCAGAT+TGG	+	chr2.1:26112110-26112129	None:intergenic	50.0%
	GCATATCGCAGCCAAAAAGC+CGG	+	chr2.1:26112804-26112823	None:intergenic	50.0%
	GTTGGCAGATGCAGCAATCA+TGG	-	chr2.1:26112761-26112780	MS.gene56592:CDS	50.0%
!	TTGAAGCTAGAGGGTGCGAA+TGG	-	chr2.1:26111629-26111648	MS.gene56592:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	26111490	26112920	26111490	ID=MS.gene56592
chr2.1	mRNA	26111490	26112920	26111490	ID=MS.gene56592.t1;Parent=MS.gene56592
chr2.1	exon	26112447	26112920	26112447	ID=MS.gene56592.t1.exon1;Parent=MS.gene56592.t1
chr2.1	CDS	26112447	26112920	26112447	ID=cds.MS.gene56592.t1;Parent=MS.gene56592.t1
chr2.1	exon	26112188	26112331	26112188	ID=MS.gene56592.t1.exon2;Parent=MS.gene56592.t1
chr2.1	CDS	26112188	26112331	26112188	ID=cds.MS.gene56592.t1;Parent=MS.gene56592.t1
chr2.1	exon	26111490	26111780	26111490	ID=MS.gene56592.t1.exon3;Parent=MS.gene56592.t1
chr2.1	CDS	26111490	26111780	26111490	ID=cds.MS.gene56592.t1;Parent=MS.gene56592.t1

Gene Sequence

>MS.gene56592

ATGAGATGTACTCTTAGTCTTCCCGTATCTGTTTGTCTCCAAAACCTTCAAAAACTTAGCATTTCTGGGGTTAAATTAGTGAGTGATTCGTCCACTTGTTCAAAAGATATAACTCTCAATTTCCCGATTCTCAAAGTGTTTGAAGCTAGAGGGTGCGAATGGCCAACAACACAGAACATTAGTTTACAAGTACCTTTACTTGAGAAGTTTTCGATAGCAATATGGAACCATCATTCAAATGAATCATGTAAATATGCCATTAAGGTTCATAGTCGACGCCTAACAGATTTCTCCTACGAGGGTGATGTTGAACAAGACATCGTTCTATGTGATTCGTCCTCAATTCGTAATGCTTCTGTTGTGATTGTTGTTGATGAAGATAAAAAGGATAGAATGGAAAAACTTGGATTTCAAGCACGTAGTCTTCTCAAACAAATCGATAACGTGGAGCAGCTAAAGTTATTGTTTTACAAGGTATGTTTTTTCTTTTACGATACATGAACGGAAATAGTTTTGTATGACAAAAACATGTTGTGATAATTGAAAAAAAAAATCGCAGAATTTTAATAAAATTTTCCTTGTCCTACAGGTTTTAAGGCATGGTAAAGATATTTTCACCAATCTGCCTGTCTTTGGAAGGTTAACTTATCTGCAACTAAATGAGGTCACTGGTGAAGCTTTGTTGCATTTACTCCACAATTCCCCTATTCTTAACACTCTTGTTTTACTTAATGTAAGTTTAGGTACTCTAGCCTTTTGTTAAAAGAAATTTAATGTCTTGTTAATGTGTTTAGCGTTGTTTAGATTGGCATATTTGAGTTTATCTACTAGTATAAACACTTGTCAGACCTTCTTCAAAAAAATAAACACTTGTAAGAGTTTTTGAGAGAGCTTATAGAAACAACTTATGACATGTCCTTAAGTTGTTTTCATAAACTCTCGAGGATAGTTTATGAAAACAACTTATAGCTTATATGAAATCAGTTAGACTTAATTTATCTTTTATTATAAAAATTCCTTATACATAAGCAGTTATGTTATAAGCGCTTAATTAAGTTGTTTATCCAGAAAGGGTCTTCGTTGCATATATCATAAACTAATTTAAATGATAGAAAAACTCATGACACAAAAAAATTTCAGGGAGTAGCTGATTTAGACAAAGATGTCTTTACTTCTGCAACGGTGCCTCACTGCTTTCTGTCAAGCTTCAAAGTATTTCAGTTTAAAGGATTTAATGCGAACGAGCACGATCTTTGTTTGGTAAAATTCGTGTTGGCAGATGCAGCAATCATGGAGATGATGATGATATCACCGGCTTTTTGGCTGCGATATGCAAATGTTGATTTGAAGAAAGTTAAGGAGCAGATACTCTCATTACCAAAGTGTTCTAACAACTGCAAGATAGAATTTTCTGATATCAGTAGATCCTGA

Protein sequence

>MS.gene56592.t1

MRCTLSLPVSVCLQNLQKLSISGVKLVSDSSTCSKDITLNFPILKVFEARGCEWPTTQNISLQVPLLEKFSIAIWNHHSNESCKYAIKVHSRRLTDFSYEGDVEQDIVLCDSSSIRNASVVIVVDEDKKDRMEKLGFQARSLLKQIDNVEQLKLLFYKVLRHGKDIFTNLPVFGRLTYLQLNEVTGEALLHLLHNSPILNTLVLLNGVADLDKDVFTSATVPHCFLSSFKVFQFKGFNANEHDLCLVKFVLADAAIMEMMMISPAFWLRYANVDLKKVKEQILSLPKCSNNCKIEFSDISRS