Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59935.t1 | XP_013444537.1 | 93.8 | 96 | 6 | 0 | 1 | 96 | 56 | 151 | 8.00E-44 | 186 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59935.t1 | Q8LCA1 | 68.6 | 102 | 26 | 2 | 1 | 96 | 54 | 155 | 8.4e-34 | 144.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59935.t1 | I3SWC2 | 93.8 | 96 | 6 | 0 | 1 | 96 | 56 | 151 | 5.8e-44 | 186.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene59935 | 0.87216 | 3.94E-67 | -1.69E-46 |
| MS.gene049171 | MS.gene59935 | 0.864604 | 1.08E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene59935 | 0.850398 | 1.74E-60 | -1.69E-46 |
| MS.gene049217 | MS.gene59935 | 0.894676 | 1.97E-75 | -1.69E-46 |
| MS.gene049222 | MS.gene59935 | 0.895247 | 1.15E-75 | -1.69E-46 |
| MS.gene049232 | MS.gene59935 | 0.815705 | 8.06E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene59935 | 0.902335 | 1.08E-78 | -1.69E-46 |
| MS.gene049320 | MS.gene59935 | 0.921359 | 3.96E-88 | -1.69E-46 |
| MS.gene049369 | MS.gene59935 | 0.819545 | 1.10E-52 | -1.69E-46 |
| MS.gene04939 | MS.gene59935 | 0.800412 | 1.46E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene59935 | 0.873714 | 1.19E-67 | -1.69E-46 |
| MS.gene049609 | MS.gene59935 | 0.914066 | 2.96E-84 | -1.69E-46 |
| MS.gene049615 | MS.gene59935 | 0.828003 | 1.14E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene59935 | 0.809523 | 1.81E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene59935 | 0.837012 | 6.68E-57 | -1.69E-46 |
| MS.gene049661 | MS.gene59935 | 0.849377 | 3.36E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene59935 | 0.834431 | 3.01E-56 | -1.69E-46 |
| MS.gene049760 | MS.gene59935 | 0.808242 | 3.41E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene59935 | 0.898147 | 7.05E-77 | -1.69E-46 |
| MS.gene050076 | MS.gene59935 | 0.856217 | 3.74E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene59935 | 0.85077 | 1.37E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene59935 | 0.892683 | 1.27E-74 | -1.69E-46 |
| MS.gene050165 | MS.gene59935 | 0.871175 | 8.35E-67 | -1.69E-46 |
| MS.gene050323 | MS.gene59935 | 0.8064 | 8.38E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene59935 | 0.871107 | 8.79E-67 | -1.69E-46 |
| MS.gene050432 | MS.gene59935 | 0.882103 | 1.38E-70 | -1.69E-46 |
| MS.gene050444 | MS.gene59935 | 0.816986 | 4.17E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene59935 | 0.869711 | 2.52E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene59935 | 0.879355 | 1.33E-69 | -1.69E-46 |
| MS.gene050520 | MS.gene59935 | 0.808055 | 3.74E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene59935 | 0.86821 | 7.73E-66 | -1.69E-46 |
| MS.gene050577 | MS.gene59935 | 0.854654 | 1.07E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene59935 | 0.881826 | 1.74E-70 | -1.69E-46 |
| MS.gene050612 | MS.gene59935 | 0.871169 | 8.39E-67 | -1.69E-46 |
| MS.gene050662 | MS.gene59935 | 0.819201 | 1.32E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene59935 | 0.823731 | 1.18E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene59935 | 0.873243 | 1.71E-67 | -1.69E-46 |
| MS.gene050686 | MS.gene59935 | 0.852583 | 4.20E-61 | -1.69E-46 |
| MS.gene050690 | MS.gene59935 | 0.84512 | 4.95E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene59935 | 0.908183 | 2.26E-81 | -1.69E-46 |
| MS.gene050747 | MS.gene59935 | 0.888079 | 8.11E-73 | -1.69E-46 |
| MS.gene050767 | MS.gene59935 | 0.86717 | 1.67E-65 | -1.69E-46 |
| MS.gene050770 | MS.gene59935 | 0.869509 | 2.94E-66 | -1.69E-46 |
| MS.gene050772 | MS.gene59935 | 0.937819 | 1.86E-98 | -1.69E-46 |
| MS.gene050781 | MS.gene59935 | 0.813463 | 2.53E-51 | -1.69E-46 |
| MS.gene050783 | MS.gene59935 | 0.811093 | 8.32E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene59935 | 0.840207 | 9.99E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene59935 | 0.884133 | 2.49E-71 | -1.69E-46 |
| MS.gene050986 | MS.gene59935 | 0.873965 | 9.77E-68 | -1.69E-46 |
| MS.gene05100 | MS.gene59935 | 0.883598 | 3.92E-71 | -1.69E-46 |
| MS.gene05101 | MS.gene59935 | 0.816031 | 6.82E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene59935 | 0.880275 | 6.28E-70 | -1.69E-46 |
| MS.gene051113 | MS.gene59935 | -0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene59935 | -0.821542 | 3.82E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene59935 | 0.864063 | 1.59E-64 | -1.69E-46 |
| MS.gene051317 | MS.gene59935 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene59935 | 0.871286 | 7.67E-67 | -1.69E-46 |
| MS.gene051551 | MS.gene59935 | 0.86766 | 1.16E-65 | -1.69E-46 |
| MS.gene051617 | MS.gene59935 | 0.811415 | 7.08E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene59935 | 0.877125 | 8.07E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene59935 | 0.855194 | 7.43E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene59935 | 0.864371 | 1.28E-64 | -1.69E-46 |
| MS.gene051810 | MS.gene59935 | 0.899941 | 1.20E-77 | -1.69E-46 |
| MS.gene051838 | MS.gene59935 | 0.812429 | 4.26E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene59935 | 0.880989 | 3.48E-70 | -1.69E-46 |
| MS.gene051877 | MS.gene59935 | 0.817861 | 2.65E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene59935 | 0.821625 | 3.66E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene59935 | 0.839026 | 2.03E-57 | -1.69E-46 |
| MS.gene052271 | MS.gene59935 | 0.888985 | 3.63E-73 | -1.69E-46 |
| MS.gene052290 | MS.gene59935 | 0.833229 | 6.01E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene59935 | 0.819795 | 9.63E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene59935 | 0.817065 | 4.00E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene59935 | 0.878929 | 1.89E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene59935 | 0.867051 | 1.82E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene59935 | 0.850228 | 1.95E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene59935 | 0.824393 | 8.27E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene59935 | 0.864169 | 1.48E-64 | -1.69E-46 |
| MS.gene052485 | MS.gene59935 | 0.8182 | 2.22E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene59935 | 0.833731 | 4.51E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene59935 | 0.845095 | 5.03E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene59935 | 0.859248 | 4.72E-63 | -1.69E-46 |
| MS.gene052505 | MS.gene59935 | 0.841177 | 5.57E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene59935 | 0.82764 | 1.40E-54 | -1.69E-46 |
| MS.gene052510 | MS.gene59935 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene59935 | 0.899026 | 2.98E-77 | -1.69E-46 |
| MS.gene052670 | MS.gene59935 | 0.833203 | 6.10E-56 | -1.69E-46 |
| MS.gene052822 | MS.gene59935 | 0.834154 | 3.53E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene59935 | 0.847953 | 8.34E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene59935 | 0.843809 | 1.11E-58 | -1.69E-46 |
| MS.gene052870 | MS.gene59935 | 0.802301 | 5.99E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene59935 | 0.812553 | 4.00E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene59935 | 0.859478 | 4.02E-63 | -1.69E-46 |
| MS.gene052966 | MS.gene59935 | 0.801715 | 7.90E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene59935 | 0.830559 | 2.74E-55 | -1.69E-46 |
| MS.gene053009 | MS.gene59935 | 0.855491 | 6.09E-62 | -1.69E-46 |
| MS.gene053018 | MS.gene59935 | 0.806573 | 7.70E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene59935 | 0.857482 | 1.58E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene59935 | 0.882812 | 7.61E-71 | -1.69E-46 |
| MS.gene053107 | MS.gene59935 | 0.82306 | 1.70E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene59935 | 0.843229 | 1.59E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene59935 | 0.905484 | 4.09E-80 | -1.69E-46 |
| MS.gene053209 | MS.gene59935 | 0.822745 | 2.01E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene59935 | 0.945407 | 3.24E-104 | -1.69E-46 |
| MS.gene053286 | MS.gene59935 | 0.936247 | 2.36E-97 | -1.69E-46 |
| MS.gene053322 | MS.gene59935 | 0.898119 | 7.25E-77 | -1.69E-46 |
| MS.gene053436 | MS.gene59935 | 0.877689 | 5.14E-69 | -1.69E-46 |
| MS.gene053449 | MS.gene59935 | 0.82198 | 3.03E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene59935 | 0.833663 | 4.69E-56 | -1.69E-46 |
| MS.gene053574 | MS.gene59935 | 0.903795 | 2.40E-79 | -1.69E-46 |
| MS.gene053579 | MS.gene59935 | 0.837644 | 4.60E-57 | -1.69E-46 |
| MS.gene053626 | MS.gene59935 | 0.843386 | 1.45E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene59935 | 0.912523 | 1.77E-83 | -1.69E-46 |
| MS.gene053813 | MS.gene59935 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene59935 | 0.832353 | 9.92E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene59935 | 0.80117 | 1.02E-48 | -1.69E-46 |
| MS.gene053915 | MS.gene59935 | 0.833654 | 4.71E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene59935 | 0.879057 | 1.70E-69 | -1.69E-46 |
| MS.gene054003 | MS.gene59935 | 0.807912 | 4.01E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene59935 | 0.857344 | 1.74E-62 | -1.69E-46 |
| MS.gene054408 | MS.gene59935 | 0.856133 | 3.95E-62 | -1.69E-46 |
| MS.gene054595 | MS.gene59935 | 0.847595 | 1.05E-59 | -1.69E-46 |
| MS.gene054600 | MS.gene59935 | 0.901619 | 2.23E-78 | -1.69E-46 |
| MS.gene054642 | MS.gene59935 | 0.928571 | 2.39E-92 | -1.69E-46 |
| MS.gene05470 | MS.gene59935 | 0.811907 | 5.53E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene59935 | 0.868993 | 4.32E-66 | -1.69E-46 |
| MS.gene054803 | MS.gene59935 | 0.868752 | 5.17E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene59935 | 0.871834 | 5.05E-67 | -1.69E-46 |
| MS.gene054927 | MS.gene59935 | 0.869848 | 2.28E-66 | -1.69E-46 |
| MS.gene054954 | MS.gene59935 | 0.865467 | 5.78E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene59935 | 0.900793 | 5.13E-78 | -1.69E-46 |
| MS.gene055116 | MS.gene59935 | 0.829208 | 5.85E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene59935 | -0.829954 | 3.86E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene59935 | 0.888092 | 8.02E-73 | -1.69E-46 |
| MS.gene055212 | MS.gene59935 | 0.872565 | 2.88E-67 | -1.69E-46 |
| MS.gene055224 | MS.gene59935 | 0.812261 | 4.63E-51 | -1.69E-46 |
| MS.gene055254 | MS.gene59935 | 0.831903 | 1.28E-55 | -1.69E-46 |
| MS.gene055277 | MS.gene59935 | 0.800738 | 1.25E-48 | -1.69E-46 |
| MS.gene055289 | MS.gene59935 | 0.880787 | 4.11E-70 | -1.69E-46 |
| MS.gene055362 | MS.gene59935 | 0.915379 | 6.31E-85 | -1.69E-46 |
| MS.gene055397 | MS.gene59935 | 0.873615 | 1.28E-67 | -1.69E-46 |
| MS.gene055412 | MS.gene59935 | 0.81564 | 8.33E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene59935 | 0.905473 | 4.14E-80 | -1.69E-46 |
| MS.gene055502 | MS.gene59935 | 0.892939 | 9.99E-75 | -1.69E-46 |
| MS.gene055577 | MS.gene59935 | 0.865 | 8.11E-65 | -1.69E-46 |
| MS.gene055636 | MS.gene59935 | 0.835812 | 1.35E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene59935 | 0.835379 | 1.74E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene59935 | 0.889582 | 2.13E-73 | -1.69E-46 |
| MS.gene055722 | MS.gene59935 | 0.911634 | 4.87E-83 | -1.69E-46 |
| MS.gene055750 | MS.gene59935 | 0.814081 | 1.85E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene59935 | 0.905722 | 3.18E-80 | -1.69E-46 |
| MS.gene055941 | MS.gene59935 | 0.865508 | 5.61E-65 | -1.69E-46 |
| MS.gene055956 | MS.gene59935 | -0.834982 | 2.19E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene59935 | 0.871619 | 5.95E-67 | -1.69E-46 |
| MS.gene056374 | MS.gene59935 | 0.910366 | 2.03E-82 | -1.69E-46 |
| MS.gene056407 | MS.gene59935 | 0.819258 | 1.28E-52 | -1.69E-46 |
| MS.gene056409 | MS.gene59935 | 0.8095 | 1.84E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene59935 | 0.805251 | 1.46E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene59935 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene59935 | 0.811062 | 8.45E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene59935 | 0.834653 | 2.65E-56 | -1.69E-46 |
| MS.gene056449 | MS.gene59935 | 0.820054 | 8.40E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene59935 | 0.865304 | 6.51E-65 | -1.69E-46 |
| MS.gene056504 | MS.gene59935 | 0.835814 | 1.35E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene59935 | 0.849929 | 2.36E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene59935 | 0.852227 | 5.30E-61 | -1.69E-46 |
| MS.gene056549 | MS.gene59935 | 0.808389 | 3.17E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene59935 | 0.822753 | 2.00E-53 | -1.69E-46 |
| MS.gene056610 | MS.gene59935 | 0.819757 | 9.82E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene59935 | 0.825441 | 4.68E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene59935 | 0.9264 | 4.94E-91 | -1.69E-46 |
| MS.gene05666 | MS.gene59935 | 0.826838 | 2.18E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene59935 | 0.848292 | 6.73E-60 | -1.69E-46 |
| MS.gene056897 | MS.gene59935 | 0.8199 | 9.11E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene59935 | 0.816685 | 4.87E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene59935 | 0.86569 | 4.92E-65 | -1.69E-46 |
| MS.gene057048 | MS.gene59935 | 0.818674 | 1.73E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene59935 | 0.878017 | 3.95E-69 | -1.69E-46 |
| MS.gene057123 | MS.gene59935 | 0.81172 | 6.08E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene59935 | 0.812102 | 5.02E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene59935 | 0.912511 | 1.79E-83 | -1.69E-46 |
| MS.gene057146 | MS.gene59935 | 0.882872 | 7.24E-71 | -1.69E-46 |
| MS.gene057196 | MS.gene59935 | 0.813362 | 2.66E-51 | -1.69E-46 |
| MS.gene057285 | MS.gene59935 | 0.805144 | 1.54E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene59935 | 0.901045 | 3.98E-78 | -1.69E-46 |
| MS.gene05735 | MS.gene59935 | 0.823623 | 1.25E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene59935 | 0.92645 | 4.61E-91 | -1.69E-46 |
| MS.gene057658 | MS.gene59935 | 0.837922 | 3.91E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene59935 | 0.831037 | 2.09E-55 | -1.69E-46 |
| MS.gene057775 | MS.gene59935 | 0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene59935 | 0.807291 | 5.43E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene59935 | 0.852384 | 4.78E-61 | -1.69E-46 |
| MS.gene057856 | MS.gene59935 | 0.808026 | 3.79E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene59935 | 0.808123 | 3.62E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene59935 | 0.848652 | 5.35E-60 | -1.69E-46 |
| MS.gene058006 | MS.gene59935 | 0.854349 | 1.31E-61 | -1.69E-46 |
| MS.gene058019 | MS.gene59935 | 0.899563 | 1.75E-77 | -1.69E-46 |
| MS.gene058130 | MS.gene59935 | 0.863103 | 3.16E-64 | -1.69E-46 |
| MS.gene058233 | MS.gene59935 | 0.805684 | 1.19E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene59935 | 0.833477 | 5.21E-56 | -1.69E-46 |
| MS.gene058323 | MS.gene59935 | 0.872081 | 4.18E-67 | -1.69E-46 |
| MS.gene058338 | MS.gene59935 | 0.831303 | 1.80E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene59935 | 0.844273 | 8.37E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene59935 | 0.92557 | 1.53E-90 | -1.69E-46 |
| MS.gene058544 | MS.gene59935 | 0.887715 | 1.12E-72 | -1.69E-46 |
| MS.gene058660 | MS.gene59935 | 0.842892 | 1.96E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene59935 | 0.896135 | 4.93E-76 | -1.69E-46 |
| MS.gene058773 | MS.gene59935 | 0.870065 | 1.93E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene59935 | 0.853568 | 2.19E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene59935 | 0.86331 | 2.73E-64 | -1.69E-46 |
| MS.gene058840 | MS.gene59935 | -0.802577 | 5.25E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene59935 | 0.880629 | 4.69E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene59935 | 0.852659 | 3.99E-61 | -1.69E-46 |
| MS.gene059029 | MS.gene59935 | 0.8878 | 1.04E-72 | -1.69E-46 |
| MS.gene05913 | MS.gene59935 | 0.850744 | 1.39E-60 | -1.69E-46 |
| MS.gene05934 | MS.gene59935 | 0.885637 | 6.85E-72 | -1.69E-46 |
| MS.gene059367 | MS.gene59935 | 0.830946 | 2.20E-55 | -1.69E-46 |
| MS.gene059368 | MS.gene59935 | 0.818673 | 1.73E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene59935 | 0.833032 | 6.73E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene59935 | 0.890447 | 9.77E-74 | -1.69E-46 |
| MS.gene059667 | MS.gene59935 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene59935 | 0.809715 | 1.65E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene59935 | 0.904004 | 1.93E-79 | -1.69E-46 |
| MS.gene059688 | MS.gene59935 | 0.854816 | 9.56E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene59935 | 0.844182 | 8.86E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene59935 | 0.846677 | 1.87E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene59935 | 0.833309 | 5.74E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene59935 | 0.910438 | 1.87E-82 | -1.69E-46 |
| MS.gene059756 | MS.gene59935 | 0.862102 | 6.43E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene59935 | 0.822805 | 1.95E-53 | -1.69E-46 |
| MS.gene059858 | MS.gene59935 | 0.814387 | 1.58E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene59935 | 0.843746 | 1.16E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene59935 | 0.87753 | 5.84E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene59935 | 0.888706 | 4.65E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene59935 | 0.846771 | 1.76E-59 | -1.69E-46 |
| MS.gene060341 | MS.gene59935 | 0.803913 | 2.78E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene59935 | 0.807901 | 4.03E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene59935 | 0.833428 | 5.36E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene59935 | 0.863106 | 3.15E-64 | -1.69E-46 |
| MS.gene060703 | MS.gene59935 | 0.828541 | 8.49E-55 | -1.69E-46 |
| MS.gene060727 | MS.gene59935 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene060728 | MS.gene59935 | 0.847833 | 9.00E-60 | -1.69E-46 |
| MS.gene060762 | MS.gene59935 | 0.842759 | 2.12E-58 | -1.69E-46 |
| MS.gene06077 | MS.gene59935 | 0.856057 | 4.16E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene59935 | 0.909738 | 4.08E-82 | -1.69E-46 |
| MS.gene060818 | MS.gene59935 | 0.85684 | 2.45E-62 | -1.69E-46 |
| MS.gene060835 | MS.gene59935 | 0.884227 | 2.30E-71 | -1.69E-46 |
| MS.gene060837 | MS.gene59935 | 0.845096 | 5.03E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene59935 | 0.895428 | 9.67E-76 | -1.69E-46 |
| MS.gene060982 | MS.gene59935 | 0.81795 | 2.53E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene59935 | 0.889693 | 1.93E-73 | -1.69E-46 |
| MS.gene061051 | MS.gene59935 | -0.800908 | 1.16E-48 | -1.69E-46 |
| MS.gene061134 | MS.gene59935 | 0.848767 | 4.97E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene59935 | 0.883394 | 4.66E-71 | -1.69E-46 |
| MS.gene061171 | MS.gene59935 | 0.83939 | 1.63E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene59935 | 0.907728 | 3.70E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAATTATGCATACCTTTC+TGG | 0.079710 | 8.2:-71610768 | None:intergenic |
| CCTGGAGTTCTTGAGTTAAT+AGG | 0.246781 | 8.2:+71609800 | MS.gene59935:CDS |
| GATAGACTTCCTTTGATTCC+TGG | 0.345188 | 8.2:+71609782 | MS.gene59935:CDS |
| GTTCTTGAGTTAATAGGAAT+TGG | 0.346748 | 8.2:+71609806 | MS.gene59935:CDS |
| AAAGATTGCTCGTGATGTTA+TGG | 0.420998 | 8.2:+71609384 | MS.gene59935:CDS |
| TAGCTAGTGTATTTGCACTA+TGG | 0.434144 | 8.2:+71609630 | MS.gene59935:CDS |
| GATGTTATGGTAATGGCAAC+AGG | 0.459632 | 8.2:+71609397 | MS.gene59935:CDS |
| TTTGCACTATGGAGCTCAGC+TGG | 0.465802 | 8.2:+71609641 | MS.gene59935:CDS |
| TGAAGATTCTTAACAAACTC+AGG | 0.486308 | 8.2:-71609454 | None:intergenic |
| TCAGTTGAGTCAACTTCTGT+TGG | 0.503744 | 8.2:-71609427 | None:intergenic |
| TAAATATGCAGTGGGTTCAT+TGG | 0.505381 | 8.2:+71609604 | MS.gene59935:CDS |
| CCTATTAACTCAAGAACTCC+AGG | 0.507872 | 8.2:-71609800 | None:intergenic |
| TTAATAGGAATTGGTTACAC+TGG | 0.524822 | 8.2:+71609815 | MS.gene59935:CDS |
| TAATAGGAATTGGTTACACT+GGG | 0.540472 | 8.2:+71609816 | MS.gene59935:CDS |
| TCAAGAACTCCAGGAATCAA+AGG | 0.544788 | 8.2:-71609791 | None:intergenic |
| TGCTCGTGATGTTATGGTAA+TGG | 0.557462 | 8.2:+71609390 | MS.gene59935:CDS |
| TTTGATGATAAATATGCAGT+GGG | 0.562064 | 8.2:+71609596 | MS.gene59935:CDS |
| ATTTGATGATAAATATGCAG+TGG | 0.570116 | 8.2:+71609595 | MS.gene59935:CDS |
| AATAGGAATTGGTTACACTG+GGG | 0.760636 | 8.2:+71609817 | MS.gene59935:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAATAACATAATTCT+AGG | - | chr8.2:71609554-71609573 | None:intergenic | 10.0% |
| !! | ATAAAAATGTATTACAATAT+CGG | - | chr8.2:71610289-71610308 | None:intergenic | 10.0% |
| !! | TATTTCAAAAAAAAAATACA+AGG | - | chr8.2:71609915-71609934 | None:intergenic | 10.0% |
| !! | TGTATATATATATATATATG+AGG | + | chr8.2:71610649-71610668 | MS.gene59935:intron | 10.0% |
| !!! | AATTATGTTATTTATTTTGT+TGG | + | chr8.2:71609556-71609575 | MS.gene59935:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:71610176-71610195 | None:intergenic | 100.0% |
| !! | TCAATAATAAACATTAAGAA+GGG | - | chr8.2:71609531-71609550 | None:intergenic | 15.0% |
| !!! | TATTTTGTCATAAAATCAAA+TGG | - | chr8.2:71610466-71610485 | None:intergenic | 15.0% |
| !! | AAATATAGAAGATGAATACT+AGG | - | chr8.2:71610708-71610727 | None:intergenic | 20.0% |
| !! | CTTAGATTTAAATATATGAC+TGG | + | chr8.2:71609857-71609876 | MS.gene59935:intron | 20.0% |
| !! | GTCAATAATAAACATTAAGA+AGG | - | chr8.2:71609532-71609551 | None:intergenic | 20.0% |
| !! | TCTAATCTTATCAATTTGTA+AGG | - | chr8.2:71610329-71610348 | None:intergenic | 20.0% |
| !! | TTACAAATTGATAAGATTAG+AGG | + | chr8.2:71610328-71610347 | MS.gene59935:intron | 20.0% |
| !!! | TTTTTTTCCAGTAATTTCTA+GGG | + | chr8.2:71610406-71610425 | MS.gene59935:intron | 20.0% |
| ! | TAGGTTGTTAGAAATTGTAA+TGG | + | chr8.2:71609494-71609513 | MS.gene59935:intron | 25.0% |
| !! | ATTTGATGATAAATATGCAG+TGG | + | chr8.2:71609595-71609614 | MS.gene59935:CDS | 25.0% |
| !! | TATGAGGTATTATTCATCTT+TGG | + | chr8.2:71610665-71610684 | MS.gene59935:intron | 25.0% |
| !! | TTTGATGATAAATATGCAGT+GGG | + | chr8.2:71609596-71609615 | MS.gene59935:CDS | 25.0% |
| !!! | AATATCGCGTATTTGATTTT+TGG | + | chr8.2:71609888-71609907 | MS.gene59935:intron | 25.0% |
| !!! | GTTTTTTTCCAGTAATTTCT+AGG | + | chr8.2:71610405-71610424 | MS.gene59935:intron | 25.0% |
| !!! | TTGTTTTTTAAAATGATCCC+CGG | + | chr8.2:71609952-71609971 | MS.gene59935:intron | 25.0% |
| AAGAAAACCCTAGAAATTAC+TGG | - | chr8.2:71610416-71610435 | None:intergenic | 30.0% | |
| AAGCACAATAGTATTTGACA+TGG | - | chr8.2:71610201-71610220 | None:intergenic | 30.0% | |
| AATATCGGACTCTATCTATA+AGG | - | chr8.2:71610274-71610293 | None:intergenic | 30.0% | |
| AGCACAATAGTATTTGACAT+GGG | - | chr8.2:71610200-71610219 | None:intergenic | 30.0% | |
| ATCAAATGGCTTTCTTAAGA+TGG | - | chr8.2:71610452-71610471 | None:intergenic | 30.0% | |
| ATGTCAAATACTATTGTGCT+TGG | + | chr8.2:71610200-71610219 | MS.gene59935:intron | 30.0% | |
| CAATTACTTTCACTTGTAAC+AGG | + | chr8.2:71609754-71609773 | MS.gene59935:intron | 30.0% | |
| GCATCAAGTGAAATAATGTT+GGG | - | chr8.2:71610087-71610106 | None:intergenic | 30.0% | |
| GCTTTCTTAAGATGGTATTT+AGG | - | chr8.2:71610444-71610463 | None:intergenic | 30.0% | |
| GTTCTTGAGTTAATAGGAAT+TGG | + | chr8.2:71609806-71609825 | MS.gene59935:CDS | 30.0% | |
| TAATAGGAATTGGTTACACT+GGG | + | chr8.2:71609816-71609835 | MS.gene59935:CDS | 30.0% | |
| TGAAGATTCTTAACAAACTC+AGG | - | chr8.2:71609457-71609476 | None:intergenic | 30.0% | |
| TGCATCAAGTGAAATAATGT+TGG | - | chr8.2:71610088-71610107 | None:intergenic | 30.0% | |
| TTAATAGGAATTGGTTACAC+TGG | + | chr8.2:71609815-71609834 | MS.gene59935:CDS | 30.0% | |
| ! | ACTTGATGCATTGATATACA+TGG | + | chr8.2:71610098-71610117 | MS.gene59935:intron | 30.0% |
| ! | TATTTTGTTGGCATCATAGT+GGG | + | chr8.2:71609568-71609587 | MS.gene59935:intron | 30.0% |
| !! | TTATTTTGTTGGCATCATAG+TGG | + | chr8.2:71609567-71609586 | MS.gene59935:intron | 30.0% |
| !!! | TGTTTTTTAAAATGATCCCC+GGG | + | chr8.2:71609953-71609972 | MS.gene59935:intron | 30.0% |
| AAAGATTGCTCGTGATGTTA+TGG | + | chr8.2:71609384-71609403 | MS.gene59935:CDS | 35.0% | |
| AATAGGAATTGGTTACACTG+GGG | + | chr8.2:71609817-71609836 | MS.gene59935:CDS | 35.0% | |
| ACAATAGTATTTGACATGGG+GGG | - | chr8.2:71610197-71610216 | None:intergenic | 35.0% | |
| ATCAAATACGCGATATTTGC+AGG | - | chr8.2:71609885-71609904 | None:intergenic | 35.0% | |
| ATTGACATATAGATAGGGGA+TGG | + | chr8.2:71610226-71610245 | MS.gene59935:intron | 35.0% | |
| CAAGAAGCTGTATGATACAT+AGG | + | chr8.2:71609475-71609494 | MS.gene59935:intron | 35.0% | |
| CACAATAGTATTTGACATGG+GGG | - | chr8.2:71610198-71610217 | None:intergenic | 35.0% | |
| CCTGCATTGAATAGTGTATA+AGG | - | chr8.2:71610136-71610155 | None:intergenic | 35.0% | |
| CCTTATACACTATTCAATGC+AGG | + | chr8.2:71610133-71610152 | MS.gene59935:intron | 35.0% | |
| GCACAATAGTATTTGACATG+GGG | - | chr8.2:71610199-71610218 | None:intergenic | 35.0% | |
| TAGCTAGTGTATTTGCACTA+TGG | + | chr8.2:71609630-71609649 | MS.gene59935:CDS | 35.0% | |
| TCAAATACGCGATATTTGCA+GGG | - | chr8.2:71609884-71609903 | None:intergenic | 35.0% | |
| TTCTATATTTCACCTTGCAG+TGG | + | chr8.2:71610718-71610737 | MS.gene59935:intron | 35.0% | |
| ! | GCATTGATATACATGGTTGA+TGG | + | chr8.2:71610105-71610124 | MS.gene59935:intron | 35.0% |
| ! | GGTGCATTGACATATAGATA+GGG | + | chr8.2:71610221-71610240 | MS.gene59935:intron | 35.0% |
| ! | GTGCATTGACATATAGATAG+GGG | + | chr8.2:71610222-71610241 | MS.gene59935:intron | 35.0% |
| ! | TAAATATGCAGTGGGTTCAT+TGG | + | chr8.2:71609604-71609623 | MS.gene59935:CDS | 35.0% |
| ! | TGGTGCATTGACATATAGAT+AGG | + | chr8.2:71610220-71610239 | MS.gene59935:intron | 35.0% |
| !! | GATGGCCTTATAGAAGATAT+GGG | + | chr8.2:71610244-71610263 | MS.gene59935:intron | 35.0% |
| AATAGTATTTGACATGGGGG+GGG | - | chr8.2:71610195-71610214 | None:intergenic | 40.0% | |
| ACACTATTCAATGCAGGACT+TGG | + | chr8.2:71610139-71610158 | MS.gene59935:intron | 40.0% | |
| CAATAGTATTTGACATGGGG+GGG | - | chr8.2:71610196-71610215 | None:intergenic | 40.0% | |
| CCTATTAACTCAAGAACTCC+AGG | - | chr8.2:71609803-71609822 | None:intergenic | 40.0% | |
| CCTGGAGTTCTTGAGTTAAT+AGG | + | chr8.2:71609800-71609819 | MS.gene59935:CDS | 40.0% | |
| GATAGACTTCCTTTGATTCC+TGG | + | chr8.2:71609782-71609801 | MS.gene59935:CDS | 40.0% | |
| GCCATCCCATATCTTCTATA+AGG | - | chr8.2:71610252-71610271 | None:intergenic | 40.0% | |
| GCCTTATAGAAGATATGGGA+TGG | + | chr8.2:71610248-71610267 | MS.gene59935:intron | 40.0% | |
| TCAAGAACTCCAGGAATCAA+AGG | - | chr8.2:71609794-71609813 | None:intergenic | 40.0% | |
| TCAGTTGAGTCAACTTCTGT+TGG | - | chr8.2:71609430-71609449 | None:intergenic | 40.0% | |
| TGCTCGTGATGTTATGGTAA+TGG | + | chr8.2:71609390-71609409 | MS.gene59935:CDS | 40.0% | |
| !! | GATATACATGGTTGATGGTC+AGG | + | chr8.2:71610110-71610129 | MS.gene59935:intron | 40.0% |
| !! | GATGTTATGGTAATGGCAAC+AGG | + | chr8.2:71609397-71609416 | MS.gene59935:CDS | 40.0% |
| !! | GGATGGCCTTATAGAAGATA+TGG | + | chr8.2:71610243-71610262 | MS.gene59935:intron | 40.0% |
| ATAGTATTTGACATGGGGGG+GGG | - | chr8.2:71610194-71610213 | None:intergenic | 45.0% | |
| CCTATCAGCTTAAATGGACC+CGG | - | chr8.2:71609974-71609993 | None:intergenic | 45.0% | |
| CTATCAGCTTAAATGGACCC+GGG | - | chr8.2:71609973-71609992 | None:intergenic | 45.0% | |
| CTGCCACCTATCAGCTTAAA+TGG | - | chr8.2:71609980-71609999 | None:intergenic | 45.0% | |
| CTTGTATGCAAACCACTGCA+AGG | - | chr8.2:71610733-71610752 | None:intergenic | 45.0% | |
| GGTCCATTTAAGCTGATAGG+TGG | + | chr8.2:71609974-71609993 | MS.gene59935:intron | 45.0% | |
| TATCAGCTTAAATGGACCCG+GGG | - | chr8.2:71609972-71609991 | None:intergenic | 45.0% | |
| !!! | GAGCTCAGCTGGTTTTATCT+CGG | + | chr8.2:71609652-71609671 | MS.gene59935:CDS | 45.0% |
| CCGGGTCCATTTAAGCTGAT+AGG | + | chr8.2:71609971-71609990 | MS.gene59935:intron | 50.0% | |
| TAGTATTTGACATGGGGGGG+GGG | - | chr8.2:71610193-71610212 | None:intergenic | 50.0% | |
| TTTGCACTATGGAGCTCAGC+TGG | + | chr8.2:71609641-71609660 | MS.gene59935:CDS | 50.0% | |
| AGTATTTGACATGGGGGGGG+GGG | - | chr8.2:71610192-71610211 | None:intergenic | 55.0% | |
| GTATTTGACATGGGGGGGGG+GGG | - | chr8.2:71610191-71610210 | None:intergenic | 60.0% | |
| TATTTGACATGGGGGGGGGG+GGG | - | chr8.2:71610190-71610209 | None:intergenic | 60.0% | |
| ATTTGACATGGGGGGGGGGG+GGG | - | chr8.2:71610189-71610208 | None:intergenic | 65.0% | |
| TTTGACATGGGGGGGGGGGG+GGG | - | chr8.2:71610188-71610207 | None:intergenic | 70.0% | |
| TTGACATGGGGGGGGGGGGG+GGG | - | chr8.2:71610187-71610206 | None:intergenic | 75.0% | |
| ! | TGACATGGGGGGGGGGGGGG+GGG | - | chr8.2:71610186-71610205 | None:intergenic | 80.0% |
| ! | ACATGGGGGGGGGGGGGGGG+GGG | - | chr8.2:71610184-71610203 | None:intergenic | 85.0% |
| ! | GACATGGGGGGGGGGGGGGG+GGG | - | chr8.2:71610185-71610204 | None:intergenic | 85.0% |
| ! | ATGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:71610182-71610201 | None:intergenic | 90.0% |
| ! | CATGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:71610183-71610202 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.2:71610181-71610200 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 71609380 | 71610775 | 71609380 | ID=MS.gene59935 |
| chr8.2 | mRNA | 71609380 | 71610775 | 71609380 | ID=MS.gene59935.t1;Parent=MS.gene59935 |
| chr8.2 | exon | 71609380 | 71609483 | 71609380 | ID=MS.gene59935.t1.exon1;Parent=MS.gene59935.t1 |
| chr8.2 | CDS | 71609380 | 71609483 | 71609380 | ID=cds.MS.gene59935.t1;Parent=MS.gene59935.t1 |
| chr8.2 | exon | 71609587 | 71609673 | 71609587 | ID=MS.gene59935.t1.exon2;Parent=MS.gene59935.t1 |
| chr8.2 | CDS | 71609587 | 71609673 | 71609587 | ID=cds.MS.gene59935.t1;Parent=MS.gene59935.t1 |
| chr8.2 | exon | 71609776 | 71609838 | 71609776 | ID=MS.gene59935.t1.exon3;Parent=MS.gene59935.t1 |
| chr8.2 | CDS | 71609776 | 71609838 | 71609776 | ID=cds.MS.gene59935.t1;Parent=MS.gene59935.t1 |
| chr8.2 | exon | 71610738 | 71610775 | 71610738 | ID=MS.gene59935.t1.exon4;Parent=MS.gene59935.t1 |
| chr8.2 | CDS | 71610738 | 71610775 | 71610738 | ID=cds.MS.gene59935.t1;Parent=MS.gene59935.t1 |
| Gene Sequence |
| Protein sequence |
