AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0618770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618770 MtrunA17_Chr8g0387651 90.407 344 8 1 1 319 1 344 0.0 612
Msa0618770 MtrunA17_Chr1g0202351 53.503 314 94 4 29 319 30 314 1.61e-108 318
Msa0618770 MtrunA17_Chr8g0361751 26.230 305 184 7 28 315 40 320 7.54e-18 82.8
Msa0618770 MtrunA17_Chr4g0021461 29.932 147 91 2 165 311 151 285 1.55e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0618770 AT5G60750.1 60.997 341 94 6 6 319 19 347 6.06e-131 377
Msa0618770 AT1G14270.4 45.882 85 46 0 231 315 124 208 2.56e-17 80.1
Msa0618770 AT1G14270.3 45.882 85 46 0 231 315 124 208 2.56e-17 80.1
Msa0618770 AT1G14270.2 45.882 85 46 0 231 315 144 228 4.56e-17 79.7
Msa0618770 AT1G14270.1 30.682 176 111 4 149 315 161 334 1.15e-16 80.1
Msa0618770 AT2G20725.1 26.531 294 167 10 53 315 24 299 1.06e-13 70.9

Find 125 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAAGGATATGGATTTAA+AGG 0.132900 4_2:+69702786 None:intergenic
ACCAGGACATTCACTCTATT+TGG 0.169886 4_2:+69703063 None:intergenic
GAAGGATTGAAACGAGAATT+TGG 0.185134 4_2:+69702608 None:intergenic
CATCAGTGACAAGGCTAAAT+AGG 0.223638 4_2:+69699439 None:intergenic
TTCTTTGGACATCGGCATTT+TGG 0.234853 4_2:-69699542 Msa0618770:CDS
CAATGTTGTTGCATAGTCTT+TGG 0.238859 4_2:-69698936 Msa0618770:CDS
TGGTCTATAATTTCCGGTTT+GGG 0.258555 4_2:+69701975 None:intergenic
ACACCACACAGGCATGTATT+TGG 0.285573 4_2:+69699083 None:intergenic
GTCATTGTACCTTAACAATT+AGG 0.291692 4_2:+69698772 None:intergenic
AAGGATTCTTTGACATTTAG+AGG 0.293855 4_2:-69699468 Msa0618770:CDS
ATGCTGCCACTTATATTTCT+TGG 0.297795 4_2:-69699006 Msa0618770:CDS
CCTTGCTGAAGCCAGTTATA+TGG 0.298053 4_2:+69699487 None:intergenic
AGTTTAGCCTGGAAGGAAAA+TGG 0.299581 4_2:-69699338 Msa0618770:CDS
AATTGAGTATTCTGTGCTTT+AGG 0.300509 4_2:-69702025 Msa0618770:CDS
AGACGAGGAAAAGGCTTAAT+TGG 0.303382 4_2:+69702671 None:intergenic
GATTAATTACATCAAGGATA+TGG 0.309560 4_2:+69702777 None:intergenic
AGAAAATAGAGGATAGGTTT+TGG 0.313940 4_2:+69703025 None:intergenic
TGACGCAGGTTATGCTTCTT+TGG 0.340055 4_2:-69699557 Msa0618770:intron
AAACAGTGGTCTATAATTTC+CGG 0.342884 4_2:+69701969 None:intergenic
TTGGCCAAATCCCAAGGGTT+AGG 0.345732 4_2:+69703116 None:intergenic
GCCTGTGTGGTGTGCAATAC+TGG 0.349411 4_2:-69699073 Msa0618770:CDS
TTGTCCTCTTTCTCTCTGTA+TGG 0.356860 4_2:-69702854 Msa0618770:five_prime_UTR
AAGGATTGAAACGAGAATTT+GGG 0.367301 4_2:+69702609 None:intergenic
TGCTGCCACTTATATTTCTT+GGG 0.375579 4_2:-69699005 Msa0618770:CDS
CATTACAAATACACTTGGTT+TGG 0.375866 4_2:+69698750 None:intergenic
GTGGTCTATAATTTCCGGTT+TGG 0.379283 4_2:+69701974 None:intergenic
AAACACAAAATCTACATAAC+AGG 0.379877 4_2:-69702989 Msa0618770:five_prime_UTR
TGGCCAAATCCCAAGGGTTA+GGG 0.388472 4_2:+69703117 None:intergenic
AGCATACTTACGTTGTTTGA+AGG 0.402673 4_2:+69702590 None:intergenic
CAAACCAAGTGTATTTGTAA+TGG 0.414867 4_2:-69698749 Msa0618770:three_prime_UTR
TCATGTTTCCTCTTGTCAAT+CGG 0.417015 4_2:-69699290 Msa0618770:CDS
ATCAGTGACAAGGCTAAATA+GGG 0.430586 4_2:+69699440 None:intergenic
AGACTATGCAACAACATTGA+TGG 0.439339 4_2:+69698940 None:intergenic
TCCGTCCCCTTCCACCCGAC+TGG 0.444389 4_2:-69699365 Msa0618770:CDS
GCCACTTATATTTCTTGGGA+TGG 0.450363 4_2:-69699001 Msa0618770:CDS
TCTTCCATACAGAGAGAAAG+AGG 0.453967 4_2:+69702850 None:intergenic
CTTGCTGAAGCCAGTTATAT+GGG 0.459032 4_2:+69699488 None:intergenic
TTCTTTGACATTTAGAGGGC+AGG 0.461094 4_2:-69699463 Msa0618770:CDS
ATGCTTTGGATCAGCGTCTT+CGG 0.462287 4_2:-69698819 Msa0618770:three_prime_UTR
ATGATGATTCTTTAGTAAGC+AGG 0.472678 4_2:-69698867 Msa0618770:three_prime_UTR
TATATTTCTTGGGATGGTGA+TGG 0.475959 4_2:-69698995 Msa0618770:CDS
GATATCATGAACAAGACAAT+TGG 0.476236 4_2:+69703097 None:intergenic
TCGATGGCAGGATGGGTAGT+AGG 0.477125 4_2:+69699247 None:intergenic
TGATTGTTCAACACTTGAAA+GGG 0.482634 4_2:+69699215 None:intergenic
AGAACAGTACCTAATTGTTA+AGG 0.485374 4_2:-69698781 Msa0618770:three_prime_UTR
ATTTCTAACCCAGAAAATAG+AGG 0.485651 4_2:+69703014 None:intergenic
TTGATTGTTCAACACTTGAA+AGG 0.487389 4_2:+69699214 None:intergenic
ATTGGTTTGCGGTGATGGAA+TGG 0.490495 4_2:-69703197 None:intergenic
GGTCTATAATTTCCGGTTTG+GGG 0.493762 4_2:+69701976 None:intergenic
CGACTGGTTCAAGTTTAGCC+TGG 0.494889 4_2:-69699349 Msa0618770:CDS
ATATTTCTTGGGATGGTGAT+GGG 0.495092 4_2:-69698994 Msa0618770:CDS
TTAATCACTGATTATAGAGA+AGG 0.495473 4_2:-69702760 Msa0618770:five_prime_UTR
ATCGGTCTGCGCTCCTGTGT+GGG 0.497992 4_2:-69699145 Msa0618770:CDS
CTTGAACCAGTCGGGTGGAA+GGG 0.500064 4_2:+69699359 None:intergenic
ACCTGTGTCGATGGCAGGAT+GGG 0.500774 4_2:+69699240 None:intergenic
TTGTGTAAAAGCATCTAACT+TGG 0.504387 4_2:+69703157 None:intergenic
AATTGGTGCAATCTGAATCA+AGG 0.508090 4_2:-69701938 Msa0618770:CDS
TTGAACCAGTCGGGTGGAAG+GGG 0.510746 4_2:+69699360 None:intergenic
CCAGTTATATGGGCTGCAAA+AGG 0.512015 4_2:+69699498 None:intergenic
TGTGTAAAAGCATCTAACTT+GGG 0.514914 4_2:+69703158 None:intergenic
TGTATATTATTATTAAACTC+AGG 0.516039 4_2:-69698715 Msa0618770:three_prime_UTR
TATCGGTCTGCGCTCCTGTG+TGG 0.516259 4_2:-69699146 Msa0618770:CDS
CGAAACGAGGTGGTAGGAAA+AGG 0.517076 4_2:+69702635 None:intergenic
AGTGTCGGGAGACGAGGAAA+AGG 0.520382 4_2:+69702662 None:intergenic
TAACCCAGAAAATAGAGGAT+AGG 0.521202 4_2:+69703019 None:intergenic
ATAATGTTGTCAAAAGAGAC+TGG 0.525290 4_2:-69701911 Msa0618770:CDS
TAGGAAAAGGACGAAGTGTC+GGG 0.528426 4_2:+69702648 None:intergenic
GACCTGTGTCGATGGCAGGA+TGG 0.530416 4_2:+69699239 None:intergenic
GATGTAACTGAAGGACTAGC+TGG 0.531776 4_2:-69699420 Msa0618770:CDS
CTACATAACAGGACAAAGCT+AGG 0.531841 4_2:-69702978 Msa0618770:five_prime_UTR
GGACGAAGTGTCGGGAGACG+AGG 0.533342 4_2:+69702656 None:intergenic
ACTTGAACCAGTCGGGTGGA+AGG 0.533549 4_2:+69699358 None:intergenic
AGGCTAAACTTGAACCAGTC+GGG 0.535684 4_2:+69699351 None:intergenic
GTTGTATGCAATTGTAGTAT+CGG 0.544728 4_2:-69699163 Msa0618770:CDS
GGGTGACCTGTGTCGATGGC+AGG 0.545730 4_2:+69699235 None:intergenic
AGACAATTGGCCAAATCCCA+AGG 0.551879 4_2:+69703110 None:intergenic
GAATCCATTACAAATACACT+TGG 0.555773 4_2:+69698745 None:intergenic
TGGTTCAAGTTTAGCCTGGA+AGG 0.555909 4_2:-69699345 Msa0618770:CDS
ACCATCCCAAGAAATATAAG+TGG 0.557728 4_2:+69699000 None:intergenic
ATCAGTGATTAATTACATCA+AGG 0.559590 4_2:+69702771 None:intergenic
TTGAACAATCAATAAAAGCA+AGG 0.561023 4_2:-69699203 Msa0618770:CDS
GCATGTATTTGGTAAGTGAC+GGG 0.563519 4_2:+69699094 None:intergenic
ACCAGTCGGGTGGAAGGGGA+CGG 0.564379 4_2:+69699364 None:intergenic
GGTTATGCTTCTTTGGACAT+CGG 0.565940 4_2:-69699550 Msa0618770:CDS
GGCATGTATTTGGTAAGTGA+CGG 0.567093 4_2:+69699093 None:intergenic
GTGTAAAAGCATCTAACTTG+GGG 0.569346 4_2:+69703159 None:intergenic
GTATATTATTATTAAACTCA+GGG 0.570519 4_2:-69698714 Msa0618770:three_prime_UTR
CTGGAAGTCAATCATTCCTA+AGG 0.571427 4_2:-69701892 Msa0618770:intron
GTAGGAAAAGGACGAAGTGT+CGG 0.572929 4_2:+69702647 None:intergenic
ACCAAATAGAGTGAATGTCC+TGG 0.576963 4_2:-69703064 Msa0618770:five_prime_UTR
GTCTATATCTGATGAATATG+CGG 0.578919 4_2:-69698682 Msa0618770:three_prime_UTR
CAGGCTAAACTTGAACCAGT+CGG 0.579922 4_2:+69699350 None:intergenic
GTCTATAATTTCCGGTTTGG+GGG 0.581343 4_2:+69701977 None:intergenic
GGAAAAGGAAAGGGAAAACC+AGG 0.587282 4_2:+69703046 None:intergenic
TCATCAGATATAGACAAAGT+AGG 0.590007 4_2:+69698690 None:intergenic
ATTGGTGCAATCTGAATCAA+GGG 0.594008 4_2:-69701937 Msa0618770:CDS
AGGATTCTTTGACATTTAGA+GGG 0.596115 4_2:-69699467 Msa0618770:CDS
GGCCAAATCCCAAGGGTTAG+GGG 0.598920 4_2:+69703118 None:intergenic
GTGTGATATTTACACGGTCA+AGG 0.600158 4_2:-69698972 Msa0618770:CDS
GCCAAATCCCAAGGGTTAGG+GGG 0.608240 4_2:+69703119 None:intergenic
TTGTTGCATAGTCTTTGGAA+TGG 0.609310 4_2:-69698931 Msa0618770:CDS
TGAGAGAGCCGATTGACAAG+AGG 0.610131 4_2:+69699282 None:intergenic
GCAGGATGGGTAGTAGGTCA+AGG 0.610496 4_2:+69699253 None:intergenic
GCATACAACAACATTGCCAC+AGG 0.610600 4_2:+69699177 None:intergenic
TGAACAATCAATAAAAGCAA+GGG 0.613230 4_2:-69699202 Msa0618770:CDS
GGTCTGCGCTCCTGTGTGGG+AGG 0.621158 4_2:-69699142 Msa0618770:CDS
GGGATCCGAAACGAGGTGGT+AGG 0.624729 4_2:+69702629 None:intergenic
CCATATAACTGGCTTCAGCA+AGG 0.626497 4_2:-69699487 Msa0618770:CDS
CTTGTCACTGATGTAACTGA+AGG 0.627885 4_2:-69699429 Msa0618770:CDS
ACCCATCCTGCCATCGACAC+AGG 0.628035 4_2:-69699241 Msa0618770:CDS
ACCAGTATTGCACACCACAC+AGG 0.628546 4_2:+69699072 None:intergenic
TGTAAAAGCATCTAACTTGG+GGG 0.630587 4_2:+69703160 None:intergenic
CTAAACTTGAACCAGTCGGG+TGG 0.632925 4_2:+69699354 None:intergenic
GACAATTGGCCAAATCCCAA+GGG 0.635304 4_2:+69703111 None:intergenic
AGAATTTGGGATCCGAAACG+AGG 0.645031 4_2:+69702622 None:intergenic
AATAAAAGCAAGGGATCCTG+TGG 0.652461 4_2:-69699193 Msa0618770:CDS
GAAAGGGTGACCTGTGTCGA+TGG 0.653532 4_2:+69699231 None:intergenic
CTTCAGTTACATCAGTGACA+AGG 0.657659 4_2:+69699430 None:intergenic
AAAACTATTTCCTCCCACAC+AGG 0.659992 4_2:+69699132 None:intergenic
GTAAAAGCATCTAACTTGGG+GGG 0.685710 4_2:+69703161 None:intergenic
ATTTGGGATCCGAAACGAGG+TGG 0.685782 4_2:+69702625 None:intergenic
TTACCAAATACATGCCTGTG+TGG 0.698661 4_2:-69699086 Msa0618770:CDS
CCAATTCCTCATGAAAACAG+TGG 0.701208 4_2:+69701955 None:intergenic
TGATGGGTGTGATATTTACA+CGG 0.748257 4_2:-69698978 Msa0618770:CDS
GTGACGGGAGTAGAAAACCG+CGG 0.770907 4_2:+69699109 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAATAAAAAGTTGT+TGG + chr4_2:69699316-69699335 None:intergenic 10.0%
!!! GTTTTTTTATATTTGTGTTA+TGG - chr4_2:69699340-69699359 Msa0618770:CDS 15.0%
!!! TAATTTACTAGTTTTGTTAT+AGG - chr4_2:69699466-69699485 Msa0618770:CDS 15.0%
!! GTAAATATATGTTTGTATTT+AGG - chr4_2:69700472-69700491 Msa0618770:intron 15.0%
!! GATTAATGATATAATATAGA+TGG - chr4_2:69700634-69700653 Msa0618770:intron 15.0%
!!! AGAATTTTGATTTTGATTTT+AGG - chr4_2:69700792-69700811 Msa0618770:intron 15.0%
!! TGTATATTATTATTAAACTC+AGG - chr4_2:69703138-69703157 Msa0618770:five_prime_UTR 15.0%
!! GTATATTATTATTAAACTCA+GGG - chr4_2:69703139-69703158 Msa0618770:five_prime_UTR 15.0%
!!! TTTTTATATTTGTGTTATGG+AGG - chr4_2:69699343-69699362 Msa0618770:CDS 20.0%
!! TTTGCTTACATAAAAACTAA+TGG - chr4_2:69699994-69700013 Msa0618770:intron 20.0%
!! AATATTCGTTATCAATGAAT+AGG - chr4_2:69700047-69700066 Msa0618770:intron 20.0%
!! AACAATATATTAACTGAAAG+TGG - chr4_2:69700408-69700427 Msa0618770:intron 20.0%
!! AATAAAAGAAATGTCCAATT+GGG + chr4_2:69700544-69700563 None:intergenic 20.0%
!! TAATAAAAGAAATGTCCAAT+TGG + chr4_2:69700545-69700564 None:intergenic 20.0%
!!! GGTTTATTTCTATATCTTAA+AGG + chr4_2:69700976-69700995 None:intergenic 20.0%
!! AAAAATACCAAACAATCAAA+AGG + chr4_2:69701134-69701153 None:intergenic 20.0%
!! ATTGTTAGGATTATGAAAAT+AGG + chr4_2:69701264-69701283 None:intergenic 20.0%
!!! TGATATATTTTTAACTGAGA+AGG + chr4_2:69701817-69701836 None:intergenic 20.0%
!!! TTTATCTGAGATTAACTATA+TGG + chr4_2:69701898-69701917 None:intergenic 20.0%
!!! AGAAACACTTACTTTTAATA+TGG + chr4_2:69702109-69702128 None:intergenic 20.0%
! AAACACAAAATCTACATAAC+AGG - chr4_2:69698864-69698883 Msa0618770:three_prime_UTR 25.0%
! GATTAATTACATCAAGGATA+TGG + chr4_2:69699079-69699098 None:intergenic 25.0%
! ATCAGTGATTAATTACATCA+AGG + chr4_2:69699085-69699104 None:intergenic 25.0%
!! TTAATCACTGATTATAGAGA+AGG - chr4_2:69699093-69699112 Msa0618770:CDS 25.0%
! AATTGCTGAGTAAAAAGAAA+AGG - chr4_2:69699401-69699420 Msa0618770:CDS 25.0%
! ATTGCTGAGTAAAAAGAAAA+GGG - chr4_2:69699402-69699421 Msa0618770:CDS 25.0%
!!! AGTTTTGTTATAGGTGAAAA+TGG - chr4_2:69699475-69699494 Msa0618770:CDS 25.0%
!! TGTAGCATCTTAGTATTTTT+AGG - chr4_2:69699498-69699517 Msa0618770:CDS 25.0%
!!! TCTTAGTATTTTTAGGATAC+TGG - chr4_2:69699505-69699524 Msa0618770:CDS 25.0%
!!! CTTAGTATTTTTAGGATACT+GGG - chr4_2:69699506-69699525 Msa0618770:CDS 25.0%
! ATAAGCATTTGTGAAAGTTT+GGG + chr4_2:69699729-69699748 None:intergenic 25.0%
!!! ATGGTTTTTTGTTTTCTATG+CGG - chr4_2:69700013-69700032 Msa0618770:intron 25.0%
! TCACTCACACTAATTTATAA+CGG - chr4_2:69700149-69700168 Msa0618770:intron 25.0%
! ACTATACAGCAGATATTATT+GGG + chr4_2:69700252-69700271 None:intergenic 25.0%
! AGAAACACTTCTCTATTATT+AGG - chr4_2:69700291-69700310 Msa0618770:intron 25.0%
! TTATTAGGTATTTGCAGTAT+AGG - chr4_2:69700306-69700325 Msa0618770:intron 25.0%
! GGATTGATAAAATATGTTCA+CGG + chr4_2:69700336-69700355 None:intergenic 25.0%
!!! TTTAGGCATTGAAGAATTAT+TGG - chr4_2:69700489-69700508 Msa0618770:intron 25.0%
!! AATCAAAATTCTGATAATGC+AGG + chr4_2:69700784-69700803 None:intergenic 25.0%
! CTTAAAGGAAAAGTTATAGT+AGG + chr4_2:69700961-69700980 None:intergenic 25.0%
! TTAGTAATACAAGACACTAT+GGG + chr4_2:69701004-69701023 None:intergenic 25.0%
! TTTAGTAATACAAGACACTA+TGG + chr4_2:69701005-69701024 None:intergenic 25.0%
! ATGTAATAGAATGGAAAGAA+TGG - chr4_2:69701097-69701116 Msa0618770:intron 25.0%
! AATTGAGGAGAAGAAAAATA+GGG - chr4_2:69701195-69701214 Msa0618770:intron 25.0%
! ATGATACTGAATTCATTGTT+AGG + chr4_2:69701278-69701297 None:intergenic 25.0%
! TTTGAATTGATAGAAGGAAA+TGG + chr4_2:69701307-69701326 None:intergenic 25.0%
! GTAGTTAAAAGTTAGAGAAT+TGG - chr4_2:69701484-69701503 Msa0618770:intron 25.0%
! ATTCACCATAAAACAGAAAT+AGG + chr4_2:69701576-69701595 None:intergenic 25.0%
! ATAACAAGAGTAGTCATTTA+GGG + chr4_2:69701682-69701701 None:intergenic 25.0%
! TTGAACAATCAATAAAAGCA+AGG - chr4_2:69702650-69702669 Msa0618770:CDS 25.0%
! TGAACAATCAATAAAAGCAA+GGG - chr4_2:69702651-69702670 Msa0618770:CDS 25.0%
!! TGTGTAAAAGCATCTAACTT+GGG + chr4_2:69698698-69698717 None:intergenic 30.0%
!! TTGTGTAAAAGCATCTAACT+TGG + chr4_2:69698699-69698718 None:intergenic 30.0%
GATATCATGAACAAGACAAT+TGG + chr4_2:69698759-69698778 None:intergenic 30.0%
!!! ATAGGTTTTGGAAAAGGAAA+GGG + chr4_2:69698819-69698838 None:intergenic 30.0%
! AGAAAATAGAGGATAGGTTT+TGG + chr4_2:69698831-69698850 None:intergenic 30.0%
! AAAACCTATCCTCTATTTTC+TGG - chr4_2:69698830-69698849 Msa0618770:three_prime_UTR 30.0%
! AAACCTATCCTCTATTTTCT+GGG - chr4_2:69698831-69698850 Msa0618770:three_prime_UTR 30.0%
ATTTCTAACCCAGAAAATAG+AGG + chr4_2:69698842-69698861 None:intergenic 30.0%
CATCAAGGATATGGATTTAA+AGG + chr4_2:69699070-69699089 None:intergenic 30.0%
AAGGATTGAAACGAGAATTT+GGG + chr4_2:69699247-69699266 None:intergenic 30.0%
GATAAGCATTTGTGAAAGTT+TGG + chr4_2:69699730-69699749 None:intergenic 30.0%
TATGAAACTGTTTATCTACC+AGG + chr4_2:69699752-69699771 None:intergenic 30.0%
AATTGAGTATTCTGTGCTTT+AGG - chr4_2:69699828-69699847 Msa0618770:intron 30.0%
AAACAGTGGTCTATAATTTC+CGG + chr4_2:69699887-69699906 None:intergenic 30.0%
! AGTCTCTTTTGACAACATTA+TGG + chr4_2:69699943-69699962 None:intergenic 30.0%
ATAATGTTGTCAAAAGAGAC+TGG - chr4_2:69699942-69699961 Msa0618770:intron 30.0%
!!! TTTTTTGTTTTCTATGCGGA+TGG - chr4_2:69700017-69700036 Msa0618770:intron 30.0%
TTTATCACCATCAAAACTGA+TGG + chr4_2:69700116-69700135 None:intergenic 30.0%
CATTACTGACGAATACATTT+AGG - chr4_2:69700195-69700214 Msa0618770:intron 30.0%
CTATACAGCAGATATTATTG+GGG + chr4_2:69700251-69700270 None:intergenic 30.0%
GACTATACAGCAGATATTAT+TGG + chr4_2:69700253-69700272 None:intergenic 30.0%
GTTACAATCAAACATGAGAA+AGG + chr4_2:69700437-69700456 None:intergenic 30.0%
GTTCAATGTTCTTTCAATGT+AGG - chr4_2:69700575-69700594 Msa0618770:intron 30.0%
TTTCAATGTAGGATTGAAGT+GGG - chr4_2:69700586-69700605 Msa0618770:intron 30.0%
! GATTTGAGACATATGATACT+CGG - chr4_2:69700608-69700627 Msa0618770:intron 30.0%
! CCTTCAATTAGTCTATAATC+TGG + chr4_2:69700667-69700686 None:intergenic 30.0%
CCAGATTATAGACTAATTGA+AGG - chr4_2:69700664-69700683 Msa0618770:intron 30.0%
TAGACTAATTGAAGGTTCAA+TGG - chr4_2:69700672-69700691 Msa0618770:intron 30.0%
! TGACTTGCAAATGATAATAG+AGG - chr4_2:69700714-69700733 Msa0618770:intron 30.0%
GACTTGCAAATGATAATAGA+GGG - chr4_2:69700715-69700734 Msa0618770:intron 30.0%
AAATGATAATAGAGGGTCTT+AGG - chr4_2:69700722-69700741 Msa0618770:intron 30.0%
AATGATAATAGAGGGTCTTA+GGG - chr4_2:69700723-69700742 Msa0618770:intron 30.0%
! TAATGGTTTGTAGAATGAAG+TGG - chr4_2:69701070-69701089 Msa0618770:intron 30.0%
!! GAAGTTACCTTTTGATTGTT+TGG - chr4_2:69701124-69701143 Msa0618770:intron 30.0%
!! CTATTTTTCTTCTCCTCAAT+TGG + chr4_2:69701196-69701215 None:intergenic 30.0%
CAATTGAGGAGAAGAAAAAT+AGG - chr4_2:69701194-69701213 Msa0618770:intron 30.0%
ATTGAGGAGAAGAAAAATAG+GGG - chr4_2:69701196-69701215 Msa0618770:intron 30.0%
!! AGAAGAAAAATAGGGGTATT+GGG - chr4_2:69701203-69701222 Msa0618770:intron 30.0%
CCTATGTTTGAATTGATAGA+AGG + chr4_2:69701313-69701332 None:intergenic 30.0%
CCTTCTATCAATTCAAACAT+AGG - chr4_2:69701310-69701329 Msa0618770:intron 30.0%
! TTTTTACATTGCCAAGTCTT+GGG + chr4_2:69701378-69701397 None:intergenic 30.0%
! ATTTTTACATTGCCAAGTCT+TGG + chr4_2:69701379-69701398 None:intergenic 30.0%
CAGTTAGCTGTTAGTTAAAA+AGG - chr4_2:69701417-69701436 Msa0618770:intron 30.0%
TAACGTGTGATGTCTATAAT+AGG - chr4_2:69701441-69701460 Msa0618770:intron 30.0%
GATGTCTATAATAGGAAATC+AGG - chr4_2:69701449-69701468 Msa0618770:intron 30.0%
AATAGGAATCCTTTGTTGAT+GGG + chr4_2:69701559-69701578 None:intergenic 30.0%
AAATAGGAATCCTTTGTTGA+TGG + chr4_2:69701560-69701579 None:intergenic 30.0%
!!! GGATTCCTATTTCTGTTTTA+TGG - chr4_2:69701568-69701587 Msa0618770:intron 30.0%
AGGTAATCTACGAATTTGAT+AGG + chr4_2:69701631-69701650 None:intergenic 30.0%
CAAATTCGTAGATTACCTTA+AGG - chr4_2:69701633-69701652 Msa0618770:intron 30.0%
TTCTTATGTTTCAGTCCTTA+AGG + chr4_2:69701651-69701670 None:intergenic 30.0%
CATAACAAGAGTAGTCATTT+AGG + chr4_2:69701683-69701702 None:intergenic 30.0%
! AATGAAGTATTCAACAGGAT+TGG - chr4_2:69702051-69702070 Msa0618770:intron 30.0%
ATTCCTCGCAGTTAAAATTT+AGG - chr4_2:69702179-69702198 Msa0618770:intron 30.0%
TTCCTCGCAGTTAAAATTTA+GGG - chr4_2:69702180-69702199 Msa0618770:intron 30.0%
! GTTAAAATTTAGGGTACATG+TGG - chr4_2:69702189-69702208 Msa0618770:intron 30.0%
!!! CATTTTGGTTTATAGGATCT+TGG - chr4_2:69702326-69702345 Msa0618770:intron 30.0%
AAGGATTCTTTGACATTTAG+AGG - chr4_2:69702385-69702404 Msa0618770:intron 30.0%
AGGATTCTTTGACATTTAGA+GGG - chr4_2:69702386-69702405 Msa0618770:intron 30.0%
TGATTGTTCAACACTTGAAA+GGG + chr4_2:69702641-69702660 None:intergenic 30.0%
TTGATTGTTCAACACTTGAA+AGG + chr4_2:69702642-69702661 None:intergenic 30.0%
GTTGTATGCAATTGTAGTAT+CGG - chr4_2:69702690-69702709 Msa0618770:CDS 30.0%
!! TTGCACATTTTAACATACAG+AGG - chr4_2:69702824-69702843 Msa0618770:five_prime_UTR 30.0%
ATGATGATTCTTTAGTAAGC+AGG - chr4_2:69702986-69703005 Msa0618770:five_prime_UTR 30.0%
GCATTGCTATCTACAAAAAT+AGG + chr4_2:69703018-69703037 None:intergenic 30.0%
! TTTTGTAGATAGCAATGCTT+TGG - chr4_2:69703020-69703039 Msa0618770:five_prime_UTR 30.0%
AGAACAGTACCTAATTGTTA+AGG - chr4_2:69703072-69703091 Msa0618770:five_prime_UTR 30.0%
GTCATTGTACCTTAACAATT+AGG + chr4_2:69703084-69703103 None:intergenic 30.0%
CATTACAAATACACTTGGTT+TGG + chr4_2:69703106-69703125 None:intergenic 30.0%
CAAACCAAGTGTATTTGTAA+TGG - chr4_2:69703104-69703123 Msa0618770:five_prime_UTR 30.0%
GAATCCATTACAAATACACT+TGG + chr4_2:69703111-69703130 None:intergenic 30.0%
TCATCAGATATAGACAAAGT+AGG + chr4_2:69703166-69703185 None:intergenic 30.0%
GTCTATATCTGATGAATATG+CGG - chr4_2:69703171-69703190 Msa0618770:five_prime_UTR 30.0%
!! TGTAAAAGCATCTAACTTGG+GGG + chr4_2:69698696-69698715 None:intergenic 35.0%
!! GTGTAAAAGCATCTAACTTG+GGG + chr4_2:69698697-69698716 None:intergenic 35.0%
!!! GATAGGTTTTGGAAAAGGAA+AGG + chr4_2:69698820-69698839 None:intergenic 35.0%
!!! TAGAGGATAGGTTTTGGAAA+AGG + chr4_2:69698825-69698844 None:intergenic 35.0%
TAACCCAGAAAATAGAGGAT+AGG + chr4_2:69698837-69698856 None:intergenic 35.0%
GAAGGATTGAAACGAGAATT+TGG + chr4_2:69699248-69699267 None:intergenic 35.0%
AGCATACTTACGTTGTTTGA+AGG + chr4_2:69699266-69699285 None:intergenic 35.0%
CTGAGTAAAAAGAAAAGGGT+TGG - chr4_2:69699406-69699425 Msa0618770:CDS 35.0%
ACTTTCACAAATGCTTATCC+TGG - chr4_2:69699731-69699750 Msa0618770:intron 35.0%
!!! TGTGCTCAACTTTTTTGCTT+TGG - chr4_2:69699790-69699809 Msa0618770:intron 35.0%
TGGTCTATAATTTCCGGTTT+GGG + chr4_2:69699881-69699900 None:intergenic 35.0%
! TATAGACCACTGTTTTCATG+AGG - chr4_2:69699892-69699911 Msa0618770:intron 35.0%
AATTGGTGCAATCTGAATCA+AGG - chr4_2:69699915-69699934 Msa0618770:intron 35.0%
ATTGGTGCAATCTGAATCAA+GGG - chr4_2:69699916-69699935 Msa0618770:intron 35.0%
ACTGACGAATACATTTAGGA+TGG - chr4_2:69700199-69700218 Msa0618770:intron 35.0%
! TAGATTTTGCCATTCCCAAT+TGG - chr4_2:69700527-69700546 Msa0618770:intron 35.0%
AAGAAATGTCCAATTGGGAA+TGG + chr4_2:69700539-69700558 None:intergenic 35.0%
CTTTCAATGTAGGATTGAAG+TGG - chr4_2:69700585-69700604 Msa0618770:intron 35.0%
ACAGAAAATCGCATTCATCT+TGG + chr4_2:69700885-69700904 None:intergenic 35.0%
TACAAGACACTATGGGATTT+CGG + chr4_2:69700997-69701016 None:intergenic 35.0%
CTTGTATTACTAAACCCACA+AGG - chr4_2:69701011-69701030 Msa0618770:intron 35.0%
!! AGAGCGTTTGGATTTGTTAA+TGG - chr4_2:69701053-69701072 Msa0618770:intron 35.0%
AGTGGAAGGATGTAATAGAA+TGG - chr4_2:69701088-69701107 Msa0618770:intron 35.0%
CCTCAATTGGAGATATGTAA+TGG + chr4_2:69701183-69701202 None:intergenic 35.0%
CCATTACATATCTCCAATTG+AGG - chr4_2:69701180-69701199 Msa0618770:intron 35.0%
! GAGAAGAAAAATAGGGGTAT+TGG - chr4_2:69701202-69701221 Msa0618770:intron 35.0%
ATATATCAAATGAACCCCGA+TGG + chr4_2:69701240-69701259 None:intergenic 35.0%
GCTAAAACAATTTCAGTAGC+TGG - chr4_2:69701332-69701351 Msa0618770:intron 35.0%
! TTTTACATTGCCAAGTCTTG+GGG + chr4_2:69701377-69701396 None:intergenic 35.0%
TGGTAATTGACAAGGAAGAA+GGG + chr4_2:69701602-69701621 None:intergenic 35.0%
TATTTGCATCGCTTTGTCAA+TGG - chr4_2:69701849-69701868 Msa0618770:intron 35.0%
! CTGCAAATGAAGTATTCAAC+AGG - chr4_2:69702046-69702065 Msa0618770:intron 35.0%
!!! TACCCTAAATTTTAACTGCG+AGG + chr4_2:69702185-69702204 None:intergenic 35.0%
GATTTCAACTCTGCTCAATT+GGG + chr4_2:69702231-69702250 None:intergenic 35.0%
!!! ACATCGGCATTTTGGTTTAT+AGG - chr4_2:69702319-69702338 Msa0618770:intron 35.0%
ATCAGTGACAAGGCTAAATA+GGG + chr4_2:69702416-69702435 None:intergenic 35.0%
!! ATGGCATTTTGATGTTGTCA+TGG - chr4_2:69702534-69702553 Msa0618770:intron 35.0%
!! TGGCATTTTGATGTTGTCAT+GGG - chr4_2:69702535-69702554 Msa0618770:intron 35.0%
TCATGTTTCCTCTTGTCAAT+CGG - chr4_2:69702563-69702582 Msa0618770:intron 35.0%
! ATGCTGCCACTTATATTTCT+TGG - chr4_2:69702847-69702866 Msa0618770:five_prime_UTR 35.0%
! TGCTGCCACTTATATTTCTT+GGG - chr4_2:69702848-69702867 Msa0618770:five_prime_UTR 35.0%
ACCATCCCAAGAAATATAAG+TGG + chr4_2:69702856-69702875 None:intergenic 35.0%
TATATTTCTTGGGATGGTGA+TGG - chr4_2:69702858-69702877 Msa0618770:five_prime_UTR 35.0%
ATATTTCTTGGGATGGTGAT+GGG - chr4_2:69702859-69702878 Msa0618770:five_prime_UTR 35.0%
! TGATGGGTGTGATATTTACA+CGG - chr4_2:69702875-69702894 Msa0618770:five_prime_UTR 35.0%
AGACTATGCAACAACATTGA+TGG + chr4_2:69702916-69702935 None:intergenic 35.0%
CAATGTTGTTGCATAGTCTT+TGG - chr4_2:69702917-69702936 Msa0618770:five_prime_UTR 35.0%
! TTGTTGCATAGTCTTTGGAA+TGG - chr4_2:69702922-69702941 Msa0618770:five_prime_UTR 35.0%
!! GTAAAAGCATCTAACTTGGG+GGG + chr4_2:69698695-69698714 None:intergenic 40.0%
ACCAAATAGAGTGAATGTCC+TGG - chr4_2:69698789-69698808 Msa0618770:three_prime_UTR 40.0%
ACCAGGACATTCACTCTATT+TGG + chr4_2:69698793-69698812 None:intergenic 40.0%
CTACATAACAGGACAAAGCT+AGG - chr4_2:69698875-69698894 Msa0618770:three_prime_UTR 40.0%
TTGTCCTCTTTCTCTCTGTA+TGG - chr4_2:69698999-69699018 Msa0618770:CDS 40.0%
TCTTCCATACAGAGAGAAAG+AGG + chr4_2:69699006-69699025 None:intergenic 40.0%
AGACGAGGAAAAGGCTTAAT+TGG + chr4_2:69699185-69699204 None:intergenic 40.0%
! TTTAGGATACTGGGCATAGT+TGG - chr4_2:69699515-69699534 Msa0618770:CDS 40.0%
AAGTTATCCTAGAGAGCTTG+TGG - chr4_2:69699650-69699669 Msa0618770:intron 40.0%
CTTATTTCCACAAGCTCTCT+AGG + chr4_2:69699660-69699679 None:intergenic 40.0%
!! GTCTATAATTTCCGGTTTGG+GGG + chr4_2:69699879-69699898 None:intergenic 40.0%
! GGTCTATAATTTCCGGTTTG+GGG + chr4_2:69699880-69699899 None:intergenic 40.0%
GTGGTCTATAATTTCCGGTT+TGG + chr4_2:69699882-69699901 None:intergenic 40.0%
CCAATTCCTCATGAAAACAG+TGG + chr4_2:69699901-69699920 None:intergenic 40.0%
! CCACTGTTTTCATGAGGAAT+TGG - chr4_2:69699898-69699917 Msa0618770:intron 40.0%
CTGGAAGTCAATCATTCCTA+AGG - chr4_2:69699961-69699980 Msa0618770:intron 40.0%
AGCAAAAGATGTACGACCTT+AGG + chr4_2:69699980-69699999 None:intergenic 40.0%
TGCTGGATATTGAACTCTCT+AGG - chr4_2:69700384-69700403 Msa0618770:intron 40.0%
GCTGGATATTGAACTCTCTA+GGG - chr4_2:69700385-69700404 Msa0618770:intron 40.0%
TGAGACATATGATACTCGGA+TGG - chr4_2:69700612-69700631 Msa0618770:intron 40.0%
! GGTCAGATTGATGACTGTTT+GGG - chr4_2:69700744-69700763 Msa0618770:intron 40.0%
GACTGTTTGGGTGTTAAGAA+TGG - chr4_2:69700756-69700775 Msa0618770:intron 40.0%
! CAAAATCTGTGGTAATGCCT+AGG + chr4_2:69700845-69700864 None:intergenic 40.0%
! CTAGGCATTACCACAGATTT+TGG - chr4_2:69700843-69700862 Msa0618770:intron 40.0%
GATGATGCAACCAAAATCTG+TGG + chr4_2:69700856-69700875 None:intergenic 40.0%
AGTATCCATGTCTACCTTGT+GGG + chr4_2:69701028-69701047 None:intergenic 40.0%
TAGTATCCATGTCTACCTTG+TGG + chr4_2:69701029-69701048 None:intergenic 40.0%
CAAGGTAGACATGGATACTA+AGG - chr4_2:69701029-69701048 Msa0618770:intron 40.0%
GGTTTGTAGAATGAAGTGGA+AGG - chr4_2:69701074-69701093 Msa0618770:intron 40.0%
CAAGTCTTGGGGTTGTATTT+GGG + chr4_2:69701366-69701385 None:intergenic 40.0%
TTAGAGAATTGGAGAGCTCT+TGG - chr4_2:69701495-69701514 Msa0618770:intron 40.0%
TGGTGACACATACACTCTTA+GGG + chr4_2:69701526-69701545 None:intergenic 40.0%
ATGGTGACACATACACTCTT+AGG + chr4_2:69701527-69701546 None:intergenic 40.0%
! TGTTGATGGGTCTCGATTAA+TGG + chr4_2:69701546-69701565 None:intergenic 40.0%
TAATCGAGACCCATCAACAA+AGG - chr4_2:69701547-69701566 Msa0618770:intron 40.0%
GGTAATTGACAAGGAAGAAG+GGG + chr4_2:69701601-69701620 None:intergenic 40.0%
CTGGTAATTGACAAGGAAGA+AGG + chr4_2:69701603-69701622 None:intergenic 40.0%
ATCGCTTTGTCAATGGTTGA+TGG - chr4_2:69701856-69701875 Msa0618770:intron 40.0%
TGCAAGGAAATCAAGCCATT+GGG + chr4_2:69702024-69702043 None:intergenic 40.0%
! TCAACAGGATTGGTAATCGA+TGG - chr4_2:69702061-69702080 Msa0618770:intron 40.0%
! CAACAGGATTGGTAATCGAT+GGG - chr4_2:69702062-69702081 Msa0618770:intron 40.0%
GGATTTCAACTCTGCTCAAT+TGG + chr4_2:69702232-69702251 None:intergenic 40.0%
AGGTTGAGCGTTTATTGTTC+AGG + chr4_2:69702253-69702272 None:intergenic 40.0%
AACAATAAACGCTCAACCTG+AGG - chr4_2:69702254-69702273 Msa0618770:intron 40.0%
GGTTATGCTTCTTTGGACAT+CGG - chr4_2:69702303-69702322 Msa0618770:intron 40.0%
! TTCTTTGGACATCGGCATTT+TGG - chr4_2:69702311-69702330 Msa0618770:intron 40.0%
CTTGCTGAAGCCAGTTATAT+GGG + chr4_2:69702368-69702387 None:intergenic 40.0%
TTCTTTGACATTTAGAGGGC+AGG - chr4_2:69702390-69702409 Msa0618770:intron 40.0%
CATCAGTGACAAGGCTAAAT+AGG + chr4_2:69702417-69702436 None:intergenic 40.0%
CTTCAGTTACATCAGTGACA+AGG + chr4_2:69702426-69702445 None:intergenic 40.0%
CTTGTCACTGATGTAACTGA+AGG - chr4_2:69702424-69702443 Msa0618770:intron 40.0%
AGTTTAGCCTGGAAGGAAAA+TGG - chr4_2:69702515-69702534 Msa0618770:intron 40.0%
!!! CAAAATGCCATTTTCCTTCC+AGG + chr4_2:69702525-69702544 None:intergenic 40.0%
AATAAAAGCAAGGGATCCTG+TGG - chr4_2:69702660-69702679 Msa0618770:CDS 40.0%
AAAACTATTTCCTCCCACAC+AGG + chr4_2:69702724-69702743 None:intergenic 40.0%
GCATGTATTTGGTAAGTGAC+GGG + chr4_2:69702762-69702781 None:intergenic 40.0%
GGCATGTATTTGGTAAGTGA+CGG + chr4_2:69702763-69702782 None:intergenic 40.0%
TTACCAAATACATGCCTGTG+TGG - chr4_2:69702767-69702786 Msa0618770:five_prime_UTR 40.0%
GCCACTTATATTTCTTGGGA+TGG - chr4_2:69702852-69702871 Msa0618770:five_prime_UTR 40.0%
GTGTGATATTTACACGGTCA+AGG - chr4_2:69702881-69702900 Msa0618770:five_prime_UTR 40.0%
GACAATTGGCCAAATCCCAA+GGG + chr4_2:69698745-69698764 None:intergenic 45.0%
AGACAATTGGCCAAATCCCA+AGG + chr4_2:69698746-69698765 None:intergenic 45.0%
GGAAAAGGAAAGGGAAAACC+AGG + chr4_2:69698810-69698829 None:intergenic 45.0%
! TAGGAAAAGGACGAAGTGTC+GGG + chr4_2:69699208-69699227 None:intergenic 45.0%
GTAGGAAAAGGACGAAGTGT+CGG + chr4_2:69699209-69699228 None:intergenic 45.0%
! CTTTTCCTACCACCTCGTTT+CGG - chr4_2:69699219-69699238 Msa0618770:CDS 45.0%
! AGAATTTGGGATCCGAAACG+AGG + chr4_2:69699234-69699253 None:intergenic 45.0%
TTCTTCAGAAACCCCCAAAC+CGG - chr4_2:69699865-69699884 Msa0618770:intron 45.0%
ACCATCAAAACTGATGGCAG+GGG + chr4_2:69700110-69700129 None:intergenic 45.0%
CACCATCAAAACTGATGGCA+GGG + chr4_2:69700111-69700130 None:intergenic 45.0%
TCACCATCAAAACTGATGGC+AGG + chr4_2:69700112-69700131 None:intergenic 45.0%
! CAGTCAATCATAGGAAGTGC+TGG - chr4_2:69700367-69700386 Msa0618770:intron 45.0%
AGGTTCAATGGATGTATGCG+AGG - chr4_2:69700684-69700703 Msa0618770:intron 45.0%
GGTTCAATGGATGTATGCGA+GGG - chr4_2:69700685-69700704 Msa0618770:intron 45.0%
! GGGTCAGATTGATGACTGTT+TGG - chr4_2:69700743-69700762 Msa0618770:intron 45.0%
GATGAGCAGAAAAGAAGCCT+AGG - chr4_2:69700825-69700844 Msa0618770:intron 45.0%
CTAAACCCACAAGGTAGACA+TGG - chr4_2:69701020-69701039 Msa0618770:intron 45.0%
! GGATACTAAGGTAGAGCGTT+TGG - chr4_2:69701041-69701060 Msa0618770:intron 45.0%
TTGGGTGAAATGCGATCCAT+CGG - chr4_2:69701221-69701240 Msa0618770:intron 45.0%
CCAAGTCTTGGGGTTGTATT+TGG + chr4_2:69701367-69701386 None:intergenic 45.0%
CCAAATACAACCCCAAGACT+TGG - chr4_2:69701364-69701383 Msa0618770:intron 45.0%
GACACATACACTCTTAGGGA+TGG + chr4_2:69701522-69701541 None:intergenic 45.0%
CTTCCTTGTCAATTACCAGC+TGG - chr4_2:69701604-69701623 Msa0618770:intron 45.0%
ACGAATTTGATAGGACCAGC+TGG + chr4_2:69701622-69701641 None:intergenic 45.0%
ACTGAGAAGGAAGATGATGC+AGG + chr4_2:69701804-69701823 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_2:69701958-69701977 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_2:69701959-69701978 None:intergenic 45.0%
GTACGAGTCTGTTTACCCAA+TGG - chr4_2:69702006-69702025 Msa0618770:CDS 45.0%
CTGCAAGGAAATCAAGCCAT+TGG + chr4_2:69702025-69702044 None:intergenic 45.0%
CAATGGCTTGATTTCCTTGC+AGG - chr4_2:69702023-69702042 Msa0618770:CDS 45.0%
TACTTCATTTGCAGCCTGCA+AGG + chr4_2:69702040-69702059 None:intergenic 45.0%
!! GTAATCGATGGGTTGTACCA+TGG - chr4_2:69702073-69702092 Msa0618770:intron 45.0%
AATATGGTCGTTGCACTCCA+TGG + chr4_2:69702093-69702112 None:intergenic 45.0%
TAGGGTACATGTGGCAATCA+TGG - chr4_2:69702198-69702217 Msa0618770:intron 45.0%
ATTGCACGAATTACAGCCTC+AGG + chr4_2:69702273-69702292 None:intergenic 45.0%
ATTCGTGCAATCTTTGACGC+AGG - chr4_2:69702282-69702301 Msa0618770:intron 45.0%
TGACGCAGGTTATGCTTCTT+TGG - chr4_2:69702296-69702315 Msa0618770:intron 45.0%
! CCAGTTATATGGGCTGCAAA+AGG + chr4_2:69702358-69702377 None:intergenic 45.0%
! CCTTTTGCAGCCCATATAAC+TGG - chr4_2:69702355-69702374 Msa0618770:intron 45.0%
CCTTGCTGAAGCCAGTTATA+TGG + chr4_2:69702369-69702388 None:intergenic 45.0%
! CCATATAACTGGCTTCAGCA+AGG - chr4_2:69702366-69702385 Msa0618770:intron 45.0%
! GATGTAACTGAAGGACTAGC+TGG - chr4_2:69702433-69702452 Msa0618770:intron 45.0%
AGGCTAAACTTGAACCAGTC+GGG + chr4_2:69702505-69702524 None:intergenic 45.0%
CAGGCTAAACTTGAACCAGT+CGG + chr4_2:69702506-69702525 None:intergenic 45.0%
! TGGTTCAAGTTTAGCCTGGA+AGG - chr4_2:69702508-69702527 Msa0618770:intron 45.0%
GCATACAACAACATTGCCAC+AGG + chr4_2:69702679-69702698 None:intergenic 45.0%
! TGGGAGGAAATAGTTTTCCG+CGG - chr4_2:69702727-69702746 Msa0618770:exon 45.0%
ACACCACACAGGCATGTATT+TGG + chr4_2:69702773-69702792 None:intergenic 45.0%
! ATGCTTTGGATCAGCGTCTT+CGG - chr4_2:69703034-69703053 Msa0618770:five_prime_UTR 45.0%
AAGCATCTAACTTGGGGGGT+AGG + chr4_2:69698691-69698710 None:intergenic 50.0%
TGGCCAAATCCCAAGGGTTA+GGG + chr4_2:69698739-69698758 None:intergenic 50.0%
TTGGCCAAATCCCAAGGGTT+AGG + chr4_2:69698740-69698759 None:intergenic 50.0%
CGAAACGAGGTGGTAGGAAA+AGG + chr4_2:69699221-69699240 None:intergenic 50.0%
! ATTTGGGATCCGAAACGAGG+TGG + chr4_2:69699231-69699250 None:intergenic 50.0%
TGATTGACTGCAGTCGCACA+TGG + chr4_2:69700357-69700376 None:intergenic 50.0%
GTGCGACTGCAGTCAATCAT+AGG - chr4_2:69700358-69700377 Msa0618770:intron 50.0%
TGGGTGAAATGCGATCCATC+GGG - chr4_2:69701222-69701241 Msa0618770:intron 50.0%
GGACCAGCTGGTAATTGACA+AGG + chr4_2:69701610-69701629 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_2:69701954-69701973 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr4_2:69701960-69701979 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr4_2:69701957-69701976 Msa0618770:CDS 50.0%
CTAAACTTGAACCAGTCGGG+TGG + chr4_2:69702502-69702521 None:intergenic 50.0%
! CGACTGGTTCAAGTTTAGCC+TGG - chr4_2:69702504-69702523 Msa0618770:intron 50.0%
TGAGAGAGCCGATTGACAAG+AGG + chr4_2:69702574-69702593 None:intergenic 50.0%
ACCAGTATTGCACACCACAC+AGG + chr4_2:69702784-69702803 None:intergenic 50.0%
ATCCCAAGGGTTAGGGGGTA+GGG + chr4_2:69698732-69698751 None:intergenic 55.0%
AATCCCAAGGGTTAGGGGGT+AGG + chr4_2:69698733-69698752 None:intergenic 55.0%
ACCCCCTAACCCTTGGGATT+TGG - chr4_2:69698733-69698752 Msa0618770:three_prime_UTR 55.0%
GCCAAATCCCAAGGGTTAGG+GGG + chr4_2:69698737-69698756 None:intergenic 55.0%
GGCCAAATCCCAAGGGTTAG+GGG + chr4_2:69698738-69698757 None:intergenic 55.0%
! AGTGTCGGGAGACGAGGAAA+AGG + chr4_2:69699194-69699213 None:intergenic 55.0%
!! GCCCCTGCCATCAGTTTTGA+TGG - chr4_2:69700106-69700125 Msa0618770:intron 55.0%
GGGTGAAATGCGATCCATCG+GGG - chr4_2:69701223-69701242 Msa0618770:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_2:69701952-69701971 Msa0618770:CDS 55.0%
TTGAACCAGTCGGGTGGAAG+GGG + chr4_2:69702496-69702515 None:intergenic 55.0%
CTTGAACCAGTCGGGTGGAA+GGG + chr4_2:69702497-69702516 None:intergenic 55.0%
ACTTGAACCAGTCGGGTGGA+AGG + chr4_2:69702498-69702517 None:intergenic 55.0%
GCAGGATGGGTAGTAGGTCA+AGG + chr4_2:69702603-69702622 None:intergenic 55.0%
TCGATGGCAGGATGGGTAGT+AGG + chr4_2:69702609-69702628 None:intergenic 55.0%
! ACCTGTGTCGATGGCAGGAT+GGG + chr4_2:69702616-69702635 None:intergenic 55.0%
GAAAGGGTGACCTGTGTCGA+TGG + chr4_2:69702625-69702644 None:intergenic 55.0%
! GTGACGGGAGTAGAAAACCG+CGG + chr4_2:69702747-69702766 None:intergenic 55.0%
GCCTGTGTGGTGTGCAATAC+TGG - chr4_2:69702780-69702799 Msa0618770:five_prime_UTR 55.0%
CACCCTACCCCCTAACCCTT+GGG - chr4_2:69698727-69698746 Msa0618770:three_prime_UTR 60.0%
GGGATCCGAAACGAGGTGGT+AGG + chr4_2:69699227-69699246 None:intergenic 60.0%
GAGAGCCGACCCCACTTAGT+GGG - chr4_2:69701946-69701965 Msa0618770:CDS 60.0%
ACCCATCCTGCCATCGACAC+AGG - chr4_2:69702612-69702631 Msa0618770:CDS 60.0%
! GACCTGTGTCGATGGCAGGA+TGG + chr4_2:69702617-69702636 None:intergenic 60.0%
TATCGGTCTGCGCTCCTGTG+TGG - chr4_2:69702707-69702726 Msa0618770:CDS 60.0%
ATCGGTCTGCGCTCCTGTGT+GGG - chr4_2:69702708-69702727 Msa0618770:CDS 60.0%
GCACCCTACCCCCTAACCCT+TGG - chr4_2:69698726-69698745 Msa0618770:three_prime_UTR 65.0%
!! GGACGAAGTGTCGGGAGACG+AGG + chr4_2:69699200-69699219 None:intergenic 65.0%
CGAGAGCCGACCCCACTTAG+TGG - chr4_2:69701945-69701964 Msa0618770:CDS 65.0%
ACCAGTCGGGTGGAAGGGGA+CGG + chr4_2:69702492-69702511 None:intergenic 65.0%
! GGGTGACCTGTGTCGATGGC+AGG + chr4_2:69702621-69702640 None:intergenic 65.0%
TCCGTCCCCTTCCACCCGAC+TGG - chr4_2:69702488-69702507 Msa0618770:intron 70.0%
GGTCTGCGCTCCTGTGTGGG+AGG - chr4_2:69702711-69702730 Msa0618770:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 69698669 69703206 69698669 ID=Msa0618770;Name=Msa0618770
chr4_2 mRNA 69698669 69703206 69698669 ID=Msa0618770-mRNA-1;Parent=Msa0618770;Name=Msa0618770-mRNA-1;_AED=0.24;_eAED=0.24;_QI=471|0.5|1|1|1|1|3|234|319
chr4_2 exon 69698669 69699571 69698669 ID=Msa0618770-mRNA-1:exon:20208;Parent=Msa0618770-mRNA-1
chr4_2 exon 69701893 69702048 69701893 ID=Msa0618770-mRNA-1:exon:20207;Parent=Msa0618770-mRNA-1
chr4_2 exon 69702601 69703206 69702601 ID=Msa0618770-mRNA-1:exon:20206;Parent=Msa0618770-mRNA-1
chr4_2 five_prime_UTR 69702736 69703206 69702736 ID=Msa0618770-mRNA-1:five_prime_utr;Parent=Msa0618770-mRNA-1
chr4_2 CDS 69702601 69702735 69702601 ID=Msa0618770-mRNA-1:cds;Parent=Msa0618770-mRNA-1
chr4_2 CDS 69701893 69702048 69701893 ID=Msa0618770-mRNA-1:cds;Parent=Msa0618770-mRNA-1
chr4_2 CDS 69698903 69699571 69698903 ID=Msa0618770-mRNA-1:cds;Parent=Msa0618770-mRNA-1
chr4_2 three_prime_UTR 69698669 69698902 69698669 ID=Msa0618770-mRNA-1:three_prime_utr;Parent=Msa0618770-mRNA-1
Gene Sequence

>Msa0618770

ATGTTGTTTACTTCGTCTTCTTCTCATTCTCTATTTGCTCGTCCAATTAAGCCTTTTCCTCGTCTCCCGACACTTCGTCCTTTTCCTACCACCTCGTTTCGGATCCCAAATTCTCGTTTCAATCCTTCAAACAACAAATTGAGTATTCTGTGCTTTAGGCATGAAGAGCATAATTCTTCAGAAACCCCCAAACCGGAAATTATAGACCACTGTTTTCATGAGGAATTGGTGCAATCTGAATCAAGGGACCATAATGTTGTCAAAAGAGACTGGAAGTCAATCATTCCTAAGGTTATGCTTCTTTGGACATCGGCATTTTGGTTTATAGGATCTTGGATGATTCCTTTTGCAGCCCATATAACTGGCTTCAGCAAGGATTCTTTGACATTTAGAGGGCAGGCCCTATTTAGCCTTGTCACTGATGTAACTGAAGGACTAGCTGGAATTGCAATTCTTGTTCGTTGTCTTTCACGATTCCGTCCCCTTCCACCCGACTGGTTCAAGTTTAGCCTGGAAGGAAAATGGCATTTTGATGTTGTCATGGGTTGTCTCATGTTTCCTCTTGTCAATCGGCTCTCTCAGTTCAACCTTGACCTACTACCCATCCTGCCATCGACACAGGTCACCCTTTCAAGTGTTGAACAATCAATAAAAGCAAGGGATCCTGTGGCAATGTTGTTGTATGCAATTGTAGTATCGGTCTGCGCTCCTGTGTGGGAGGAAATAGTTTTCCGCGGTTTTCTACTCCCGTCACTTACCAAATACATGCCTGTGTGGTGTGCAATACTGGTAAGTTCAGTTGCGTTTGCGCTTGCACATTTTAACATACAGAGGATGCTGCCACTTATATTTCTTGGGATGGTGATGGGTGTGATATTTACACGGTCAAGGAATTTATTGCCATCAATGTTGTTGCATAGTCTTTGGAATGGCTTTGTCTTTTTAGATTTGATGAAATAG

Protein sequence

>Msa0618770

MLFTSSSSHSLFARPIKPFPRLPTLRPFPTTSFRIPNSRFNPSNNKLSILCFRHEEHNSSETPKPEIIDHCFHEELVQSESRDHNVVKRDWKSIIPKVMLLWTSAFWFIGSWMIPFAAHITGFSKDSLTFRGQALFSLVTDVTEGLAGIAILVRCLSRFRPLPPDWFKFSLEGKWHFDVVMGCLMFPLVNRLSQFNLDLLPILPSTQVTLSSVEQSIKARDPVAMLLYAIVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVSSVAFALAHFNIQRMLPLIFLGMVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK*