AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0100570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0100570 MtrunA17_Chr1g0149051 98.391 373 6 0 3 375 4 376 0.0 756
Msa0100570 MtrunA17_Chr2g0332541 67.027 370 116 2 11 375 1 369 0.0 514
Msa0100570 MtrunA17_Chr3g0089391 56.325 332 143 2 36 367 32 361 8.40e-133 384
Msa0100570 MtrunA17_Chr4g0019571 52.676 355 164 4 15 367 12 364 3.63e-131 380
Msa0100570 MtrunA17_Chr4g0019581 52.113 355 166 3 15 367 81 433 5.42e-130 380
Msa0100570 MtrunA17_Chr4g0019601 52.394 355 165 3 15 367 12 364 1.59e-129 376
Msa0100570 MtrunA17_Chr2g0286051 46.797 359 185 3 13 369 11 365 1.52e-120 354
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0100570 AT5G11420.1 74.722 360 90 1 16 375 8 366 0.0 574
Msa0100570 AT5G25460.1 74.444 360 88 2 19 375 11 369 0.0 568
Msa0100570 AT4G32460.2 74.510 357 90 1 19 375 10 365 0.0 561
Msa0100570 AT4G32460.1 74.510 357 90 1 19 375 10 365 0.0 561
Msa0100570 AT4G32460.4 76.687 326 75 1 50 375 1 325 0.0 530
Msa0100570 AT4G32460.3 76.687 326 75 1 50 375 1 325 0.0 530
Msa0100570 AT1G80240.1 63.793 348 125 1 27 374 21 367 2.12e-165 467
Msa0100570 AT3G08030.1 55.224 335 149 1 33 367 26 359 2.02e-132 384
Msa0100570 AT2G41810.1 50.543 368 173 3 11 370 1 367 1.27e-128 374
Msa0100570 AT2G41800.1 51.754 342 164 1 32 373 30 370 2.14e-127 371
Msa0100570 AT3G08030.2 55.660 318 140 1 50 367 1 317 3.29e-126 366
Msa0100570 AT1G29980.1 50.000 346 163 3 33 369 38 382 1.08e-120 355
Msa0100570 AT1G29980.2 49.855 345 163 3 34 369 3 346 2.86e-120 353
Msa0100570 AT2G34510.1 48.246 342 171 2 33 369 38 378 1.73e-116 344
Msa0100570 AT2G34510.2 48.630 292 145 1 83 369 1 292 1.75e-102 305
Msa0100570 AT5G14150.2 27.957 372 227 13 13 367 8 355 1.81e-36 136
Msa0100570 AT5G14150.1 27.957 372 227 13 13 367 8 355 1.81e-36 136

Find 109 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTCCGGGTTTGCCTATC+TGG 0.191893 1_3:+7045023 Msa0100570:three_prime_UTR
ATATCTGTTGCTCCTGATTT+TGG 0.209026 1_3:+7042860 Msa0100570:CDS
CCTTTACCTTTGGATGAATA+AGG 0.215858 1_3:-7044758 None:intergenic
TCTCGAAAATTGCATTCTTC+TGG 0.248365 1_3:-7045088 None:intergenic
TAGTATCAAAATATTACTTA+TGG 0.254293 1_3:+7045184 Msa0100570:three_prime_UTR
TTATTGATTCTGTTGCTCTT+AGG 0.255935 1_3:+7043017 Msa0100570:CDS
GATGATCTTTCTTCTCTTTG+TGG 0.265277 1_3:+7044869 Msa0100570:CDS
AAACCTGATATTTCCCATTC+TGG 0.280562 1_3:-7042653 None:intergenic
GGTTGGGATCCAATTGCTTA+TGG 0.285735 1_3:+7042917 Msa0100570:CDS
TGAATGGTCATCTTCTATAT+TGG 0.308808 1_3:-7044489 None:intergenic
CAAAGAATAAAAGTGATTAA+AGG 0.309159 1_3:+7042776 Msa0100570:CDS
AAGAAACTCTCATCGCCTTA+TGG 0.317677 1_3:-7044932 None:intergenic
TCAGTTTATATATATTTGTT+AGG 0.338328 1_3:+7045223 Msa0100570:three_prime_UTR
CCAAAACCATCAGAGCTAAA+AGG 0.348443 1_3:+7042599 Msa0100570:CDS
TGCTGGTAAAGACACAATTA+AGG 0.351879 1_3:+7044733 Msa0100570:CDS
TTTGCAATTAGCAATGTTAC+AGG 0.352622 1_3:-7040520 None:intergenic
TTTGAATCCACCTTTACCTT+TGG 0.354730 1_3:-7044768 None:intergenic
CACTTAAGTTTGTAGCTGTT+GGG 0.356396 1_3:+7044798 Msa0100570:CDS
TCTAAATATACCAACATCAT+TGG 0.356599 1_3:-7045413 None:intergenic
CACTTACTATTAGAAGCTTT+AGG 0.364523 1_3:-7043052 None:intergenic
GAATGGTCATCTTCTATATT+GGG 0.367423 1_3:-7044488 None:intergenic
TCAAGTTTGAGAAGAGGATA+TGG 0.377434 1_3:-7040579 None:intergenic
ATCACTCCATATGATGTGTT+AGG 0.384394 1_3:-7044458 None:intergenic
CTCACTGCATATGCACCTTC+TGG 0.384872 1_3:-7042728 None:intergenic
ATAGGCAAACCCGGACAAAA+TGG 0.392577 1_3:-7045019 None:intergenic
TCCATCTGGATTTATTCATC+TGG 0.401254 1_3:+7044984 Msa0100570:three_prime_UTR
GTCTCCCTCTCACTCATTGA+TGG 0.401514 1_3:+7040680 Msa0100570:CDS
ATACCAGAATGGGAAATATC+AGG 0.401676 1_3:+7042650 Msa0100570:CDS
GTGAAGCTGATGAAGATTAC+AGG 0.405642 1_3:-7045484 None:intergenic
TTAGTAGAATACATAAAATC+TGG 0.416766 1_3:+7042674 Msa0100570:CDS
GCTTTAAAACCATAAGCAAT+TGG 0.419076 1_3:-7042926 None:intergenic
AGTATCAAAATATTACTTAT+GGG 0.424325 1_3:+7045185 Msa0100570:three_prime_UTR
GCACTTAAGTTTGTAGCTGT+TGG 0.424811 1_3:+7044797 Msa0100570:CDS
CTTGTATACAATGTTTGTAT+AGG 0.425750 1_3:-7042890 None:intergenic
AACTTGACATCATCAATAAC+AGG 0.428308 1_3:-7044893 None:intergenic
TGAATATGATGTTGTTGAAA+TGG 0.433098 1_3:+7042949 Msa0100570:CDS
ATATTCCCTAACACATCATA+TGG 0.435096 1_3:+7044452 Msa0100570:CDS
TTCTTCTGGATTTACCAATT+CGG 0.437198 1_3:-7045074 None:intergenic
AAGGATTCTACCATCCATCC+TGG 0.450439 1_3:-7044518 None:intergenic
AAAATAATAGTTGATGCATA+TGG 0.452672 1_3:+7045532 Msa0100570:three_prime_UTR
TGTACAGGACTAGTGGCAAA+TGG 0.453001 1_3:+7042560 Msa0100570:intron
CTAAAAGGAACAGTGGTAAC+TGG 0.459222 1_3:+7042614 Msa0100570:CDS
CTTAGCGTGCGTAAACCATA+AGG 0.460821 1_3:+7044917 Msa0100570:CDS
TCCATCCTGGGAGGGGTGAA+TGG 0.464160 1_3:-7044505 None:intergenic
CAAGTTGCTAGAACAATTCC+AGG 0.464538 1_3:+7044635 Msa0100570:CDS
ATATATATAAACTGATCAAA+AGG 0.466999 1_3:-7045215 None:intergenic
ATAGGAATAACACCAAAATC+AGG 0.482295 1_3:-7042872 None:intergenic
TAGCCTCACACCCATAAAAC+AGG 0.484221 1_3:-7045163 None:intergenic
AAGAAGGCGCGAGAATGAAA+TGG 0.491575 1_3:-7040545 None:intergenic
CATAAACAAGAACACATTCA+TGG 0.495034 1_3:-7040630 None:intergenic
TCTACTGCTCTTGTGCCTTG+TGG 0.498859 1_3:-7044581 None:intergenic
TTGAGAAGAGGATATGGTAT+GGG 0.502194 1_3:-7040573 None:intergenic
CCTTATTCATCCAAAGGTAA+AGG 0.506212 1_3:+7044758 Msa0100570:CDS
ATTGTATACAAGTAGTGGTT+GGG 0.508907 1_3:+7042901 Msa0100570:CDS
TCAATAAGAGGTCCACAAGC+AGG 0.514610 1_3:-7043001 None:intergenic
CAATGAGTGAGAGGGAGACA+TGG 0.518955 1_3:-7040676 None:intergenic
TCACTCCATATGATGTGTTA+GGG 0.524767 1_3:-7044457 None:intergenic
TTTGAGAAGAGGATATGGTA+TGG 0.530891 1_3:-7040574 None:intergenic
GTACAGGACTAGTGGCAAAT+GGG 0.532908 1_3:+7042561 Msa0100570:intron
CTTCATTCAAGTTTGAGAAG+AGG 0.533584 1_3:-7040585 None:intergenic
TCTACCATCCATCCTGGGAG+GGG 0.534305 1_3:-7044512 None:intergenic
AAGGTTCCTTATTCATCCAA+AGG 0.534346 1_3:+7044752 Msa0100570:CDS
TATGGTATGGGAAGGAAAGA+AGG 0.536527 1_3:-7040561 None:intergenic
TAGCTGTTGGGACAAGAACA+AGG 0.536783 1_3:+7044810 Msa0100570:CDS
CATTGTATACAAGTAGTGGT+TGG 0.537679 1_3:+7042900 Msa0100570:CDS
AGAGCAACAGAATCAATAAG+AGG 0.543262 1_3:-7043013 None:intergenic
TGAGAGGGAGACATGGAAAG+TGG 0.555486 1_3:-7040669 None:intergenic
GATGTGTTAGGGAATATATA+AGG 0.557138 1_3:-7044446 None:intergenic
TTACTATTAGAAGCTTTAGG+AGG 0.557212 1_3:-7043049 None:intergenic
GAAATGGTTATTCATAATCC+TGG 0.558117 1_3:+7042965 Msa0100570:CDS
CTGAGAAATGACCTGAGTCT+AGG 0.559607 1_3:-7044556 None:intergenic
ACCATTCACCCCTCCCAGGA+TGG 0.561579 1_3:+7044504 Msa0100570:CDS
ATCTGGATTTATTCATCTGG+CGG 0.562198 1_3:+7044987 Msa0100570:three_prime_UTR
TTCACCCCTCCCAGGATGGA+TGG 0.564481 1_3:+7044508 Msa0100570:CDS
TTCTACCATCCATCCTGGGA+GGG 0.568707 1_3:-7044513 None:intergenic
TGGTCATCTTCTATATTGGG+TGG 0.571757 1_3:-7044485 None:intergenic
CACAAGAGCAGTAGAACTAG+TGG 0.572866 1_3:+7044589 Msa0100570:CDS
AGGATTCTACCATCCATCCT+GGG 0.576477 1_3:-7044517 None:intergenic
TATTCATCCAAAGGTAAAGG+TGG 0.579509 1_3:+7044761 Msa0100570:CDS
CAAACATTGTATACAAGTAG+TGG 0.588966 1_3:+7042896 Msa0100570:CDS
GTTAATAATCATCTTAAGAG+AGG 0.589674 1_3:-7045129 None:intergenic
GATGACCATTCACCCCTCCC+AGG 0.591765 1_3:+7044500 Msa0100570:CDS
GGTCATCTTCTATATTGGGT+GGG 0.591855 1_3:-7044484 None:intergenic
GCCAGATGAATAAATCCAGA+TGG 0.592612 1_3:-7044985 None:intergenic
AGAGCAGTAGAACTAGTGGC+AGG 0.596449 1_3:+7044593 Msa0100570:CDS
TTGCAATTAGCAATGTTACA+GGG 0.599891 1_3:-7040519 None:intergenic
GAAGAGGATATGGTATGGGA+AGG 0.601005 1_3:-7040569 None:intergenic
GGTGCATATGCAGTGAGACT+AGG 0.601052 1_3:+7042734 Msa0100570:CDS
ACTTACCATCAATGAGTGAG+AGG 0.604105 1_3:-7040685 None:intergenic
GCAGGATCTTCTTCAACACC+AGG 0.604121 1_3:-7042983 None:intergenic
TGATATTTGTACAGGACTAG+TGG 0.607209 1_3:+7042553 Msa0100570:intron
GCAGTAAAATACCTAGACTC+AGG 0.607558 1_3:+7044545 Msa0100570:CDS
TCTGGATTTACCAATTCGGA+CGG 0.614686 1_3:-7045070 None:intergenic
GTTGAAGAAGATCCTGCTTG+TGG 0.629496 1_3:+7042989 Msa0100570:CDS
GGTGTCCAGATAGGCAAACC+CGG 0.634610 1_3:-7045028 None:intergenic
CTTACCATCAATGAGTGAGA+GGG 0.634839 1_3:-7040684 None:intergenic
AAAGGAACAGTGGTAACTGG+TGG 0.638704 1_3:+7042617 Msa0100570:CDS
ATCAGAGCTAAAAGGAACAG+TGG 0.653099 1_3:+7042607 Msa0100570:CDS
GAAAGTGGAACAGAAAAGCA+AGG 0.653658 1_3:-7040654 None:intergenic
GATGCAAGTAATTCATGTGA+AGG 0.655767 1_3:+7044689 Msa0100570:CDS
CATCACCAACTGAAAATGAG+AGG 0.658666 1_3:-7044670 None:intergenic
AACTGAAAATGAGAGGACAT+AGG 0.664170 1_3:-7044663 None:intergenic
GGTCATTTCTCAGTTCCACA+AGG 0.665974 1_3:+7044566 Msa0100570:CDS
ATGTTACTAGTTGTACCAGA+AGG 0.668517 1_3:+7042713 Msa0100570:CDS
GTGTGTGTATCCAATGATGT+TGG 0.688200 1_3:+7045403 Msa0100570:three_prime_UTR
ATTCTACCATCCATCCTGGG+AGG 0.697643 1_3:-7044514 None:intergenic
TAAAGGTGGATTCAAACGTG+CGG 0.707257 1_3:+7044775 Msa0100570:CDS
AGCTGTTGGGACAAGAACAA+GGG 0.708580 1_3:+7044811 Msa0100570:CDS
AAACAAGAACACATTCATGG+TGG 0.732804 1_3:-7040627 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAACAGTTTTATATTAT+TGG + chr1_3:7041897-7041916 Msa0100570:intron 10.0%
!!! TTTTCTTTTTTTATAAGTTT+TGG + chr1_3:7042393-7042412 Msa0100570:intron 10.0%
!!! TATGGTTTGTATTTTTATTT+TGG - chr1_3:7041062-7041081 None:intergenic 15.0%
!! TGAAATTATTGCAAAAATTA+CGG - chr1_3:7041208-7041227 None:intergenic 15.0%
!! GTATTTAAAAATAGAAATGA+TGG + chr1_3:7041303-7041322 Msa0100570:intron 15.0%
!!! TACTACTTTTATGTAAAAAT+TGG - chr1_3:7041504-7041523 None:intergenic 15.0%
!! AAAAATACAAATAATTTGAC+TGG - chr1_3:7041623-7041642 None:intergenic 15.0%
!!! TTTTAGAAACTATAAAAAAG+TGG + chr1_3:7041850-7041869 Msa0100570:intron 15.0%
!!! CTAATTTGATTTTTTTTGAA+AGG + chr1_3:7042129-7042148 Msa0100570:intron 15.0%
!!! GTATTATTCAATAACTTTTA+TGG + chr1_3:7042802-7042821 Msa0100570:CDS 15.0%
!! TAATACTCATAAATCTATTT+AGG + chr1_3:7043123-7043142 Msa0100570:intron 15.0%
!! GAAACTAGTTAAATATATAT+TGG + chr1_3:7043561-7043580 Msa0100570:intron 15.0%
!!! AGACATTATTCTATTTTTAA+GGG - chr1_3:7044127-7044146 None:intergenic 15.0%
!!! TAGACATTATTCTATTTTTA+AGG - chr1_3:7044128-7044147 None:intergenic 15.0%
!! TAGTATCAAAATATTACTTA+TGG + chr1_3:7045184-7045203 Msa0100570:three_prime_UTR 15.0%
!! AGTATCAAAATATTACTTAT+GGG + chr1_3:7045185-7045204 Msa0100570:three_prime_UTR 15.0%
!! ATATATATAAACTGATCAAA+AGG - chr1_3:7045218-7045237 None:intergenic 15.0%
!! TCAGTTTATATATATTTGTT+AGG + chr1_3:7045223-7045242 Msa0100570:three_prime_UTR 15.0%
!!! TATTTTTCTTTATTAGAACA+TGG - chr1_3:7045518-7045537 None:intergenic 15.0%
!!! GATTTTTGTCATTGTAATTT+TGG - chr1_3:7040999-7041018 None:intergenic 20.0%
!!! AAATAGAAATGATGGTTTTT+TGG + chr1_3:7041311-7041330 Msa0100570:intron 20.0%
!! AAAAGTAGTAGAATTTGTAT+TGG + chr1_3:7041514-7041533 Msa0100570:intron 20.0%
!! AGATAATAATAATAATGCCT+TGG - chr1_3:7041768-7041787 None:intergenic 20.0%
!! ACAAATTATATCTAACATAG+AGG + chr1_3:7041925-7041944 Msa0100570:intron 20.0%
!!! TAAATGAATATGTGTCTTTT+GGG + chr1_3:7041970-7041989 Msa0100570:intron 20.0%
!!! TTTTATAAGTTTTGGCAAAT+AGG + chr1_3:7042401-7042420 Msa0100570:intron 20.0%
!!! TTTATAAGTTTTGGCAAATA+GGG + chr1_3:7042402-7042421 Msa0100570:intron 20.0%
!! CAAATATCATACATCAATTT+AGG - chr1_3:7042542-7042561 None:intergenic 20.0%
!! TTAGTAGAATACATAAAATC+TGG + chr1_3:7042674-7042693 Msa0100570:CDS 20.0%
!! CAAAGAATAAAAGTGATTAA+AGG + chr1_3:7042776-7042795 Msa0100570:CDS 20.0%
!!! TTATTCAATAACTTTTATGG+TGG + chr1_3:7042805-7042824 Msa0100570:CDS 20.0%
!!! AAGTGTAGTACTTATTTTTT+TGG + chr1_3:7043174-7043193 Msa0100570:intron 20.0%
!!! CAAGTGTTTAAGTTAAAATA+AGG + chr1_3:7043221-7043240 Msa0100570:intron 20.0%
!! ACCTAAAGATAATTAATCTA+GGG - chr1_3:7043413-7043432 None:intergenic 20.0%
!!! ATTTAACTAGTTTCCTTAAT+AGG - chr1_3:7043555-7043574 None:intergenic 20.0%
!! CCAATAAAACTTTAATAGTA+TGG - chr1_3:7043720-7043739 None:intergenic 20.0%
!!! CCATACTATTAAAGTTTTAT+TGG + chr1_3:7043717-7043736 Msa0100570:intron 20.0%
!!! GACATTATTCTATTTTTAAG+GGG - chr1_3:7044126-7044145 None:intergenic 20.0%
!! CAAAATTAAATGCATATCAA+TGG + chr1_3:7044150-7044169 Msa0100570:intron 20.0%
!!! ATACATGTAATTTTAGACTT+TGG + chr1_3:7044182-7044201 Msa0100570:intron 20.0%
!!! ATTTTTTAATATGTTCTCTG+TGG - chr1_3:7044408-7044427 None:intergenic 20.0%
!! ACAGAGAACATATTAAAAAA+TGG + chr1_3:7044407-7044426 Msa0100570:intron 20.0%
!!! TCAGATCTTTTATAAAAGAA+GGG - chr1_3:7045267-7045286 None:intergenic 20.0%
!!! AAAATAATAGTTGATGCATA+TGG + chr1_3:7045532-7045551 Msa0100570:three_prime_UTR 20.0%
! CTAAACATCTTAAACAATGT+TGG + chr1_3:7040760-7040779 Msa0100570:intron 25.0%
!!! AATGTTGGTTAGTATCATTT+TGG + chr1_3:7040775-7040794 Msa0100570:intron 25.0%
!! ATGTTCTTTGTTAGTCATTT+TGG + chr1_3:7040868-7040887 Msa0100570:intron 25.0%
!! TTTAAGATGTGTTTGTAGTT+TGG + chr1_3:7040966-7040985 Msa0100570:intron 25.0%
!!! ACATTTTCAACTTTAGCTTA+TGG - chr1_3:7041080-7041099 None:intergenic 25.0%
! AAGCTAAAGTTGAAAATGTT+TGG + chr1_3:7041081-7041100 Msa0100570:intron 25.0%
! AGCTAAAGTTGAAAATGTTT+GGG + chr1_3:7041082-7041101 Msa0100570:intron 25.0%
! TAACCATAGTATATAGTACT+AGG - chr1_3:7041254-7041273 None:intergenic 25.0%
! TATATTAGATCATTTGACCT+GGG + chr1_3:7041543-7041562 Msa0100570:intron 25.0%
! TTATGAGATCAAATACAATG+TGG + chr1_3:7041661-7041680 Msa0100570:intron 25.0%
!! TGGTAAAATTTTTGTAGAAG+TGG + chr1_3:7041810-7041829 Msa0100570:intron 25.0%
!! TAAAATTTTTGTAGAAGTGG+TGG + chr1_3:7041813-7041832 Msa0100570:intron 25.0%
!! GTAAATGAATATGTGTCTTT+TGG + chr1_3:7041969-7041988 Msa0100570:intron 25.0%
! TCTATAATATGATTGTCTGT+CGG + chr1_3:7042310-7042329 Msa0100570:intron 25.0%
!!! TTATAAGTTTTGGCAAATAG+GGG + chr1_3:7042403-7042422 Msa0100570:intron 25.0%
! TCCTTAATCTTGATTGAAAT+AGG - chr1_3:7042488-7042507 None:intergenic 25.0%
!! ATCATACATCAATTTAGGTT+AGG - chr1_3:7042537-7042556 None:intergenic 25.0%
! TTGATGTATGATATTTGTAC+AGG + chr1_3:7042545-7042564 Msa0100570:intron 25.0%
! AAAAAACTCAATACCAGAAT+GGG + chr1_3:7042640-7042659 Msa0100570:CDS 25.0%
! ATAAAATCTGGACAAAAACA+AGG + chr1_3:7042686-7042705 Msa0100570:CDS 25.0%
! CTTGTATACAATGTTTGTAT+AGG - chr1_3:7042893-7042912 None:intergenic 25.0%
! TGAATATGATGTTGTTGAAA+TGG + chr1_3:7042949-7042968 Msa0100570:CDS 25.0%
!! CTACATATTTGACTTTAAAG+TGG - chr1_3:7043292-7043311 None:intergenic 25.0%
!!! CACTTTAAAGTCAAATATGT+AGG + chr1_3:7043290-7043309 Msa0100570:intron 25.0%
! AAAGTCAAATATGTAGGTAT+TGG + chr1_3:7043296-7043315 Msa0100570:intron 25.0%
! TAAGTTAAGTATAGACCAAA+TGG - chr1_3:7043370-7043389 None:intergenic 25.0%
! TCCCTAGATTAATTATCTTT+AGG + chr1_3:7043409-7043428 Msa0100570:intron 25.0%
! GACCTAAAGATAATTAATCT+AGG - chr1_3:7043414-7043433 None:intergenic 25.0%
! ATATCAAACACTAAAACCAA+TGG + chr1_3:7043609-7043628 Msa0100570:intron 25.0%
! ATATTAATGTGTATAGACAC+AGG + chr1_3:7043641-7043660 Msa0100570:intron 25.0%
! TATTAATGTGTATAGACACA+GGG + chr1_3:7043642-7043661 Msa0100570:intron 25.0%
! CATATGCATATATATGCATA+TGG + chr1_3:7043751-7043770 Msa0100570:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr1_3:7043822-7043841 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr1_3:7043821-7043840 Msa0100570:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr1_3:7043834-7043853 Msa0100570:intron 25.0%
!!! AACCACTTTTTGACAATTTT+TGG - chr1_3:7043919-7043938 None:intergenic 25.0%
! ATACTAAATGTGCACTAATT+TGG + chr1_3:7044280-7044299 Msa0100570:intron 25.0%
! GAGAACATATTAAAAAATGG+TGG + chr1_3:7044410-7044429 Msa0100570:intron 25.0%
!!! TAGGTATTTTACTGCTTTTA+AGG - chr1_3:7044540-7044559 None:intergenic 25.0%
! AACGCGTTTAAAAATTCATA+GGG - chr1_3:7044964-7044983 None:intergenic 25.0%
! AAACGCGTTTAAAAATTCAT+AGG - chr1_3:7044965-7044984 None:intergenic 25.0%
!!! GGAAAAAATACAGTTTTTTC+TGG - chr1_3:7045052-7045071 None:intergenic 25.0%
! GTTAATAATCATCTTAAGAG+AGG - chr1_3:7045132-7045151 None:intergenic 25.0%
!! TTATTATTGAGCCTGTTTTA+TGG + chr1_3:7045152-7045171 Msa0100570:three_prime_UTR 25.0%
!! TATTATTGAGCCTGTTTTAT+GGG + chr1_3:7045153-7045172 Msa0100570:three_prime_UTR 25.0%
!! CTCAGATCTTTTATAAAAGA+AGG - chr1_3:7045268-7045287 None:intergenic 25.0%
!! TCTTTTATAAAAGATCTGAG+AGG + chr1_3:7045268-7045287 Msa0100570:three_prime_UTR 25.0%
! TCTAAATATACCAACATCAT+TGG - chr1_3:7045416-7045435 None:intergenic 25.0%
TTGCAATTAGCAATGTTACA+GGG - chr1_3:7040522-7040541 None:intergenic 30.0%
TTTGCAATTAGCAATGTTAC+AGG - chr1_3:7040523-7040542 None:intergenic 30.0%
CATAAACAAGAACACATTCA+TGG - chr1_3:7040633-7040652 None:intergenic 30.0%
!! TTGGTTCTAAAATGTATGAG+AGG + chr1_3:7040794-7040813 Msa0100570:intron 30.0%
!! AGTACATGTGTTACTTTGTA+GGG + chr1_3:7041127-7041146 Msa0100570:intron 30.0%
!! ATTGGTTTGTAGCTAGTTAA+AGG - chr1_3:7041486-7041505 None:intergenic 30.0%
! GTAGTAGAATTTGTATTGGT+TGG + chr1_3:7041518-7041537 Msa0100570:intron 30.0%
CTATATTAGATCATTTGACC+TGG + chr1_3:7041542-7041561 Msa0100570:intron 30.0%
TAACATAGAGGTGATTTGAT+TGG + chr1_3:7041937-7041956 Msa0100570:intron 30.0%
GTGATTTGATTGGATATACA+TGG + chr1_3:7041947-7041966 Msa0100570:intron 30.0%
CCAATTATTGTCATTGGAAA+AGG - chr1_3:7042352-7042371 None:intergenic 30.0%
! CCTTTTCCAATGACAATAAT+TGG + chr1_3:7042349-7042368 Msa0100570:intron 30.0%
TGCAATCCAATTATTGTCAT+TGG - chr1_3:7042358-7042377 None:intergenic 30.0%
GCCTATTTCAATCAAGATTA+AGG + chr1_3:7042484-7042503 Msa0100570:intron 30.0%
GAAAAAACTCAATACCAGAA+TGG + chr1_3:7042639-7042658 Msa0100570:CDS 30.0%
ATAGGAATAACACCAAAATC+AGG - chr1_3:7042875-7042894 None:intergenic 30.0%
CAAACATTGTATACAAGTAG+TGG + chr1_3:7042896-7042915 Msa0100570:CDS 30.0%
ATTGTATACAAGTAGTGGTT+GGG + chr1_3:7042901-7042920 Msa0100570:CDS 30.0%
!! GCTTTAAAACCATAAGCAAT+TGG - chr1_3:7042929-7042948 None:intergenic 30.0%
GAAATGGTTATTCATAATCC+TGG + chr1_3:7042965-7042984 Msa0100570:CDS 30.0%
!! TTATTGATTCTGTTGCTCTT+AGG + chr1_3:7043017-7043036 Msa0100570:CDS 30.0%
!! TTACTATTAGAAGCTTTAGG+AGG - chr1_3:7043052-7043071 None:intergenic 30.0%
CACTTACTATTAGAAGCTTT+AGG - chr1_3:7043055-7043074 None:intergenic 30.0%
ATTGTTCACATGTGAAGATT+TGG - chr1_3:7043442-7043461 None:intergenic 30.0%
AGCTGGATTAATACCTATTA+AGG + chr1_3:7043539-7043558 Msa0100570:intron 30.0%
TTAATATACATCCACACCAT+TGG - chr1_3:7043628-7043647 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr1_3:7043796-7043815 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr1_3:7043847-7043866 Msa0100570:intron 30.0%
GTCCAAAAATTGTCAAAAAG+TGG + chr1_3:7043914-7043933 Msa0100570:intron 30.0%
!! AAAAATGGTGGATTTGAAGA+AGG + chr1_3:7044422-7044441 Msa0100570:CDS 30.0%
GATGTGTTAGGGAATATATA+AGG - chr1_3:7044449-7044468 None:intergenic 30.0%
ATATTCCCTAACACATCATA+TGG + chr1_3:7044452-7044471 Msa0100570:CDS 30.0%
GAATGGTCATCTTCTATATT+GGG - chr1_3:7044491-7044510 None:intergenic 30.0%
TGAATGGTCATCTTCTATAT+TGG - chr1_3:7044492-7044511 None:intergenic 30.0%
AACTTGACATCATCAATAAC+AGG - chr1_3:7044896-7044915 None:intergenic 30.0%
CGTTTAAAAATTCATAGGGT+AGG - chr1_3:7044960-7044979 None:intergenic 30.0%
TTCTTCTGGATTTACCAATT+CGG - chr1_3:7045077-7045096 None:intergenic 30.0%
!! AGAATGCAATTTTCGAGAAA+TGG + chr1_3:7045093-7045112 Msa0100570:three_prime_UTR 30.0%
!! GAATGCAATTTTCGAGAAAT+GGG + chr1_3:7045094-7045113 Msa0100570:three_prime_UTR 30.0%
! TGCTATCATTCTTTTTCTTC+AGG - chr1_3:7045367-7045386 None:intergenic 30.0%
TTGAGAAGAGGATATGGTAT+GGG - chr1_3:7040576-7040595 None:intergenic 35.0%
TTTGAGAAGAGGATATGGTA+TGG - chr1_3:7040577-7040596 None:intergenic 35.0%
TCAAGTTTGAGAAGAGGATA+TGG - chr1_3:7040582-7040601 None:intergenic 35.0%
! CTTCATTCAAGTTTGAGAAG+AGG - chr1_3:7040588-7040607 None:intergenic 35.0%
AAACAAGAACACATTCATGG+TGG - chr1_3:7040630-7040649 None:intergenic 35.0%
! AAGTAACACATGTACTGGTA+AGG - chr1_3:7041123-7041142 None:intergenic 35.0%
CTACAAAGTAACACATGTAC+TGG - chr1_3:7041128-7041147 None:intergenic 35.0%
!! CAGTACATGTGTTACTTTGT+AGG + chr1_3:7041126-7041145 Msa0100570:intron 35.0%
GCGTTCATGTACATAGTATT+TGG + chr1_3:7041155-7041174 Msa0100570:intron 35.0%
GCACCTAGTACTATATACTA+TGG + chr1_3:7041248-7041267 Msa0100570:intron 35.0%
TGATGGTCTGAAAAATCACA+TGG + chr1_3:7041364-7041383 Msa0100570:intron 35.0%
GATGGTCTGAAAAATCACAT+GGG + chr1_3:7041365-7041384 Msa0100570:intron 35.0%
ATGGTCTGAAAAATCACATG+GGG + chr1_3:7041366-7041385 Msa0100570:intron 35.0%
ACTTATCACAAATGTCTCAG+AGG + chr1_3:7041452-7041471 Msa0100570:intron 35.0%
!! GAATGAAAGATAGTGGAAAG+TGG - chr1_3:7041571-7041590 None:intergenic 35.0%
GGACAAAGAATGAAAGATAG+TGG - chr1_3:7041578-7041597 None:intergenic 35.0%
CTAGACATGATCTAATACCA+AGG + chr1_3:7041748-7041767 Msa0100570:intron 35.0%
! ATAGGTTTAGCTTAGCTTGA+TGG + chr1_3:7041790-7041809 Msa0100570:intron 35.0%
!! TGAATATGTGTCTTTTGGGT+AGG + chr1_3:7041974-7041993 Msa0100570:intron 35.0%
!! TATGATTGTCTGTCGGTTTA+TGG + chr1_3:7042317-7042336 Msa0100570:intron 35.0%
TGATATTTGTACAGGACTAG+TGG + chr1_3:7042553-7042572 Msa0100570:intron 35.0%
ATACCAGAATGGGAAATATC+AGG + chr1_3:7042650-7042669 Msa0100570:CDS 35.0%
AAACCTGATATTTCCCATTC+TGG - chr1_3:7042656-7042675 None:intergenic 35.0%
ATGTTACTAGTTGTACCAGA+AGG + chr1_3:7042713-7042732 Msa0100570:CDS 35.0%
! ATATCTGTTGCTCCTGATTT+TGG + chr1_3:7042860-7042879 Msa0100570:CDS 35.0%
CATTGTATACAAGTAGTGGT+TGG + chr1_3:7042900-7042919 Msa0100570:CDS 35.0%
AGAGCAACAGAATCAATAAG+AGG - chr1_3:7043016-7043035 None:intergenic 35.0%
TTGTAGATGCAAGAACCATT+TGG + chr1_3:7043352-7043371 Msa0100570:intron 35.0%
AAACACTAAAACCAATGGTG+TGG + chr1_3:7043614-7043633 Msa0100570:intron 35.0%
TCATTGCATTGTGTGTCATA+CGG + chr1_3:7044029-7044048 Msa0100570:intron 35.0%
ACTTGCCTTTAGCAAAGAAA+AGG + chr1_3:7044079-7044098 Msa0100570:intron 35.0%
CTTGCCTTTAGCAAAGAAAA+GGG + chr1_3:7044080-7044099 Msa0100570:intron 35.0%
! AGATCCCTTTTCTTTGCTAA+AGG - chr1_3:7044087-7044106 None:intergenic 35.0%
GTCATACATGAACTAAATCG+AGG + chr1_3:7044232-7044251 Msa0100570:intron 35.0%
CAACATCATTTGCACTATGT+TGG + chr1_3:7044315-7044334 Msa0100570:intron 35.0%
TCACTCCATATGATGTGTTA+GGG - chr1_3:7044460-7044479 None:intergenic 35.0%
ATCACTCCATATGATGTGTT+AGG - chr1_3:7044461-7044480 None:intergenic 35.0%
AACTGAAAATGAGAGGACAT+AGG - chr1_3:7044666-7044685 None:intergenic 35.0%
! TATGTCCTCTCATTTTCAGT+TGG + chr1_3:7044665-7044684 Msa0100570:CDS 35.0%
GATGCAAGTAATTCATGTGA+AGG + chr1_3:7044689-7044708 Msa0100570:CDS 35.0%
! ATGATTGTTGAAGCTTTTGC+TGG + chr1_3:7044716-7044735 Msa0100570:CDS 35.0%
TGCTGGTAAAGACACAATTA+AGG + chr1_3:7044733-7044752 Msa0100570:CDS 35.0%
AAGGTTCCTTATTCATCCAA+AGG + chr1_3:7044752-7044771 Msa0100570:CDS 35.0%
CCTTTACCTTTGGATGAATA+AGG - chr1_3:7044761-7044780 None:intergenic 35.0%
CCTTATTCATCCAAAGGTAA+AGG + chr1_3:7044758-7044777 Msa0100570:CDS 35.0%
TATTCATCCAAAGGTAAAGG+TGG + chr1_3:7044761-7044780 Msa0100570:CDS 35.0%
TTTGAATCCACCTTTACCTT+TGG - chr1_3:7044771-7044790 None:intergenic 35.0%
CACTTAAGTTTGTAGCTGTT+GGG + chr1_3:7044798-7044817 Msa0100570:CDS 35.0%
GATGATCTTTCTTCTCTTTG+TGG + chr1_3:7044869-7044888 Msa0100570:CDS 35.0%
! TTTTTAAACGCGTTTCCATC+TGG + chr1_3:7044970-7044989 Msa0100570:three_prime_UTR 35.0%
TCCATCTGGATTTATTCATC+TGG + chr1_3:7044984-7045003 Msa0100570:three_prime_UTR 35.0%
ATCTGGATTTATTCATCTGG+CGG + chr1_3:7044987-7045006 Msa0100570:three_prime_UTR 35.0%
!!! TGTATTTTTTCCGTCCGAAT+TGG + chr1_3:7045060-7045079 Msa0100570:three_prime_UTR 35.0%
TCTCGAAAATTGCATTCTTC+TGG - chr1_3:7045091-7045110 None:intergenic 35.0%
TATGGTATGGGAAGGAAAGA+AGG - chr1_3:7040564-7040583 None:intergenic 40.0%
GAAAGTGGAACAGAAAAGCA+AGG - chr1_3:7040657-7040676 None:intergenic 40.0%
CTTACCATCAATGAGTGAGA+GGG - chr1_3:7040687-7040706 None:intergenic 40.0%
ACTTACCATCAATGAGTGAG+AGG - chr1_3:7040688-7040707 None:intergenic 40.0%
!! TGTGTTACTTTGTAGGGACT+TGG + chr1_3:7041133-7041152 Msa0100570:intron 40.0%
TTGGACCCTCTCATATTCTT+TGG + chr1_3:7041330-7041349 Msa0100570:intron 40.0%
TGGACCCTCTCATATTCTTT+GGG + chr1_3:7041331-7041350 Msa0100570:intron 40.0%
CGTACCCAAAGAATATGAGA+GGG - chr1_3:7041338-7041357 None:intergenic 40.0%
TCGTACCCAAAGAATATGAG+AGG - chr1_3:7041339-7041358 None:intergenic 40.0%
CTTTGGGTACGAAAAGATGA+TGG + chr1_3:7041347-7041366 Msa0100570:intron 40.0%
GACATTTGTGATAAGTCACG+TGG - chr1_3:7041448-7041467 None:intergenic 40.0%
CCACTGTAGGAAATCAAATC+AGG - chr1_3:7041599-7041618 None:intergenic 40.0%
! CCTGATTTGATTTCCTACAG+TGG + chr1_3:7041596-7041615 Msa0100570:intron 40.0%
TAATTTGACTGGACCACTGT+AGG - chr1_3:7041612-7041631 None:intergenic 40.0%
! GCAAATGGGAATTTTGAGCT+TGG + chr1_3:7042575-7042594 Msa0100570:CDS 40.0%
!!! CCTTTTAGCTCTGATGGTTT+TGG - chr1_3:7042602-7042621 None:intergenic 40.0%
CCAAAACCATCAGAGCTAAA+AGG + chr1_3:7042599-7042618 Msa0100570:CDS 40.0%
!!! ACTGTTCCTTTTAGCTCTGA+TGG - chr1_3:7042608-7042627 None:intergenic 40.0%
ATCAGAGCTAAAAGGAACAG+TGG + chr1_3:7042607-7042626 Msa0100570:CDS 40.0%
CTAAAAGGAACAGTGGTAAC+TGG + chr1_3:7042614-7042633 Msa0100570:CDS 40.0%
TAATCTAGGGATAGTGCGTT+TGG - chr1_3:7043400-7043419 None:intergenic 40.0%
CACATGTGAAGATTTGGCAA+TGG - chr1_3:7043436-7043455 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr1_3:7043857-7043876 Msa0100570:intron 40.0%
GTGTCATACGGAAATCAGTT+AGG + chr1_3:7044041-7044060 Msa0100570:intron 40.0%
CACACACTATGTGCTAAAGT+TGG - chr1_3:7044210-7044229 None:intergenic 40.0%
GGTCATCTTCTATATTGGGT+GGG - chr1_3:7044487-7044506 None:intergenic 40.0%
TGGTCATCTTCTATATTGGG+TGG - chr1_3:7044488-7044507 None:intergenic 40.0%
GCAGTAAAATACCTAGACTC+AGG + chr1_3:7044545-7044564 Msa0100570:CDS 40.0%
CAAGTTGCTAGAACAATTCC+AGG + chr1_3:7044635-7044654 Msa0100570:CDS 40.0%
CATCACCAACTGAAAATGAG+AGG - chr1_3:7044673-7044692 None:intergenic 40.0%
! TAAAGGTGGATTCAAACGTG+CGG + chr1_3:7044775-7044794 Msa0100570:CDS 40.0%
GCACTTAAGTTTGTAGCTGT+TGG + chr1_3:7044797-7044816 Msa0100570:CDS 40.0%
AAGAAACTCTCATCGCCTTA+TGG - chr1_3:7044935-7044954 None:intergenic 40.0%
GCCAGATGAATAAATCCAGA+TGG - chr1_3:7044988-7045007 None:intergenic 40.0%
!!! GTTTTTTCTGGTGTCCAGAT+AGG - chr1_3:7045040-7045059 None:intergenic 40.0%
TCTGGATTTACCAATTCGGA+CGG - chr1_3:7045073-7045092 None:intergenic 40.0%
!! TGCAATTTTCGAGAAATGGG+TGG + chr1_3:7045097-7045116 Msa0100570:three_prime_UTR 40.0%
!! GCAATTTTCGAGAAATGGGT+GGG + chr1_3:7045098-7045117 Msa0100570:three_prime_UTR 40.0%
!! CAATTTTCGAGAAATGGGTG+GGG + chr1_3:7045099-7045118 Msa0100570:three_prime_UTR 40.0%
GTGTGTGTATCCAATGATGT+TGG + chr1_3:7045403-7045422 Msa0100570:three_prime_UTR 40.0%
GTGAAGCTGATGAAGATTAC+AGG - chr1_3:7045487-7045506 None:intergenic 40.0%
! AAGAAGGCGCGAGAATGAAA+TGG - chr1_3:7040548-7040567 None:intergenic 45.0%
GAAGAGGATATGGTATGGGA+AGG - chr1_3:7040572-7040591 None:intergenic 45.0%
! TGTACAGGACTAGTGGCAAA+TGG + chr1_3:7042560-7042579 Msa0100570:intron 45.0%
! GTACAGGACTAGTGGCAAAT+GGG + chr1_3:7042561-7042580 Msa0100570:intron 45.0%
AAAGGAACAGTGGTAACTGG+TGG + chr1_3:7042617-7042636 Msa0100570:CDS 45.0%
GGTTGGGATCCAATTGCTTA+TGG + chr1_3:7042917-7042936 Msa0100570:CDS 45.0%
GTTGAAGAAGATCCTGCTTG+TGG + chr1_3:7042989-7043008 Msa0100570:CDS 45.0%
TCAATAAGAGGTCCACAAGC+AGG - chr1_3:7043004-7043023 None:intergenic 45.0%
AGCACACAATAGAACACAGC+TGG + chr1_3:7043522-7043541 Msa0100570:intron 45.0%
AACATCCTACCTACCTTCTC+TGG - chr1_3:7043668-7043687 None:intergenic 45.0%
AGGATTCTACCATCCATCCT+GGG - chr1_3:7044520-7044539 None:intergenic 45.0%
AAGGATTCTACCATCCATCC+TGG - chr1_3:7044521-7044540 None:intergenic 45.0%
CTGAGAAATGACCTGAGTCT+AGG - chr1_3:7044559-7044578 None:intergenic 45.0%
GGTCATTTCTCAGTTCCACA+AGG + chr1_3:7044566-7044585 Msa0100570:CDS 45.0%
CACAAGAGCAGTAGAACTAG+TGG + chr1_3:7044589-7044608 Msa0100570:CDS 45.0%
TAGCTGTTGGGACAAGAACA+AGG + chr1_3:7044810-7044829 Msa0100570:CDS 45.0%
AGCTGTTGGGACAAGAACAA+GGG + chr1_3:7044811-7044830 Msa0100570:CDS 45.0%
CTTAGCGTGCGTAAACCATA+AGG + chr1_3:7044917-7044936 Msa0100570:CDS 45.0%
ATAGGCAAACCCGGACAAAA+TGG - chr1_3:7045022-7045041 None:intergenic 45.0%
TAGCCTCACACCCATAAAAC+AGG - chr1_3:7045166-7045185 None:intergenic 45.0%
!! ATTATTATTATTATCTATAT+AGG + chr1_3:7041772-7041791 Msa0100570:intron 5.0%
TGAGAGGGAGACATGGAAAG+TGG - chr1_3:7040672-7040691 None:intergenic 50.0%
CAATGAGTGAGAGGGAGACA+TGG - chr1_3:7040679-7040698 None:intergenic 50.0%
GTCTCCCTCTCACTCATTGA+TGG + chr1_3:7040680-7040699 Msa0100570:CDS 50.0%
CTCACTGCATATGCACCTTC+TGG - chr1_3:7042731-7042750 None:intergenic 50.0%
GGTGCATATGCAGTGAGACT+AGG + chr1_3:7042734-7042753 Msa0100570:CDS 50.0%
GCAGGATCTTCTTCAACACC+AGG - chr1_3:7042986-7043005 None:intergenic 50.0%
TATAGACACAGGGCCAGAGA+AGG + chr1_3:7043652-7043671 Msa0100570:intron 50.0%
TTCTACCATCCATCCTGGGA+GGG - chr1_3:7044516-7044535 None:intergenic 50.0%
ATTCTACCATCCATCCTGGG+AGG - chr1_3:7044517-7044536 None:intergenic 50.0%
TCTACTGCTCTTGTGCCTTG+TGG - chr1_3:7044584-7044603 None:intergenic 50.0%
AGAGCAGTAGAACTAGTGGC+AGG + chr1_3:7044593-7044612 Msa0100570:CDS 50.0%
! GAGAGGACATAGGTTTTGCC+TGG - chr1_3:7044656-7044675 None:intergenic 50.0%
TTTGTCCGGGTTTGCCTATC+TGG + chr1_3:7045023-7045042 Msa0100570:three_prime_UTR 50.0%
! GAGCCTGTTTTATGGGTGTG+AGG + chr1_3:7045160-7045179 Msa0100570:three_prime_UTR 50.0%
ACATGGGGCTGTATGCCAAC+TGG + chr1_3:7041381-7041400 Msa0100570:intron 55.0%
CATGGGGCTGTATGCCAACT+GGG + chr1_3:7041382-7041401 Msa0100570:intron 55.0%
ATGGGGCTGTATGCCAACTG+GGG + chr1_3:7041383-7041402 Msa0100570:intron 55.0%
CACTCATCAACTCCCCCAGT+TGG - chr1_3:7041399-7041418 None:intergenic 55.0%
!! GATAGTGGAAAGTGGAGCCC+AGG - chr1_3:7041563-7041582 None:intergenic 55.0%
TCTACCATCCATCCTGGGAG+GGG - chr1_3:7044515-7044534 None:intergenic 55.0%
GGTGTCCAGATAGGCAAACC+CGG - chr1_3:7045031-7045050 None:intergenic 55.0%
TGGGGCTGTATGCCAACTGG+GGG + chr1_3:7041384-7041403 Msa0100570:intron 60.0%
GACACAGGGCCAGAGAAGGT+AGG + chr1_3:7043656-7043675 Msa0100570:intron 60.0%
CAGGGCCAGAGAAGGTAGGT+AGG + chr1_3:7043660-7043679 Msa0100570:intron 60.0%
GATGACCATTCACCCCTCCC+AGG + chr1_3:7044500-7044519 Msa0100570:CDS 60.0%
ACCATTCACCCCTCCCAGGA+TGG + chr1_3:7044504-7044523 Msa0100570:CDS 60.0%
TCCATCCTGGGAGGGGTGAA+TGG - chr1_3:7044508-7044527 None:intergenic 60.0%
TTCACCCCTCCCAGGATGGA+TGG + chr1_3:7044508-7044527 Msa0100570:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 7040519 7045579 7040519 ID=Msa0100570;Name=Msa0100570
chr1_3 mRNA 7040519 7045579 7040519 ID=Msa0100570-mRNA-1;Parent=Msa0100570;Name=Msa0100570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=83|1|1|1|1|1|3|642|375
chr1_3 exon 7040519 7040701 7040519 ID=Msa0100570-mRNA-1:exon:2685;Parent=Msa0100570-mRNA-1
chr1_3 exon 7042567 7043067 7042567 ID=Msa0100570-mRNA-1:exon:2686;Parent=Msa0100570-mRNA-1
chr1_3 exon 7044411 7045579 7044411 ID=Msa0100570-mRNA-1:exon:2687;Parent=Msa0100570-mRNA-1
chr1_3 five_prime_UTR 7040519 7040601 7040519 ID=Msa0100570-mRNA-1:five_prime_utr;Parent=Msa0100570-mRNA-1
chr1_3 CDS 7040602 7040701 7040602 ID=Msa0100570-mRNA-1:cds;Parent=Msa0100570-mRNA-1
chr1_3 CDS 7042567 7043067 7042567 ID=Msa0100570-mRNA-1:cds;Parent=Msa0100570-mRNA-1
chr1_3 CDS 7044411 7044937 7044411 ID=Msa0100570-mRNA-1:cds;Parent=Msa0100570-mRNA-1
chr1_3 three_prime_UTR 7044938 7045579 7044938 ID=Msa0100570-mRNA-1:three_prime_utr;Parent=Msa0100570-mRNA-1
Gene Sequence

>Msa0100570

ATGAAGAGTAACTTTCATAGCTCAACCACCATGAATGTGTTCTTGTTTATGTCCTTGCTTTTCTGTTCCACTTTCCATGTCTCCCTCTCACTCATTGATGGACTAGTGGCAAATGGGAATTTTGAGCTTGGTCCAAAACCATCAGAGCTAAAAGGAACAGTGGTAACTGGTGGAAAAAACTCAATACCAGAATGGGAAATATCAGGTTTAGTAGAATACATAAAATCTGGACAAAAACAAGGTGACATGTTACTAGTTGTACCAGAAGGTGCATATGCAGTGAGACTAGGAAATGAAGCATCAATAAAACAAAGAATAAAAGTGATTAAAGGAATGTATTATTCAATAACTTTTATGGTGGCACGTACATGTGCACAAGAAGAAAGAATTAATATATCTGTTGCTCCTGATTTTGGTGTTATTCCTATACAAACATTGTATACAAGTAGTGGTTGGGATCCAATTGCTTATGGTTTTAAAGCTGAATATGATGTTGTTGAAATGGTTATTCATAATCCTGGTGTTGAAGAAGATCCTGCTTGTGGACCTCTTATTGATTCTGTTGCTCTTAGGACTCTATATCCTCCTAAAGCTTCTAATAAGAACATATTAAAAAATGGTGGATTTGAAGAAGGACCTTATATATTCCCTAACACATCATATGGAGTGATCATCCCACCCAATATAGAAGATGACCATTCACCCCTCCCAGGATGGATGGTAGAATCCTTAAAAGCAGTAAAATACCTAGACTCAGGTCATTTCTCAGTTCCACAAGGCACAAGAGCAGTAGAACTAGTGGCAGGAAAAGAGAGTGCAATAGCACAAGTTGCTAGAACAATTCCAGGCAAAACCTATGTCCTCTCATTTTCAGTTGGTGATGCAAGTAATTCATGTGAAGGTTCAATGATTGTTGAAGCTTTTGCTGGTAAAGACACAATTAAGGTTCCTTATTCATCCAAAGGTAAAGGTGGATTCAAACGTGCGGCACTTAAGTTTGTAGCTGTTGGGACAAGAACAAGGGTGATGTTTCTTAGTACTTTTTATAGTATGAGAAGTGATGATCTTTCTTCTCTTTGTGGACCTGTTATTGATGATGTCAAGTTGCTTAGCGTGCGTAAACCATAA
Protein sequence

>Msa0100570

MKSNFHSSTTMNVFLFMSLLFCSTFHVSLSLIDGLVANGNFELGPKPSELKGTVVTGGKNSIPEWEISGLVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVIKGMYYSITFMVARTCAQEERINISVAPDFGVIPIQTLYTSSGWDPIAYGFKAEYDVVEMVIHNPGVEEDPACGPLIDSVALRTLYPPKASNKNILKNGGFEEGPYIFPNTSYGVIIPPNIEDDHSPLPGWMVESLKAVKYLDSGHFSVPQGTRAVELVAGKESAIAQVARTIPGKTYVLSFSVGDASNSCEGSMIVEAFAGKDTIKVPYSSKGKGGFKRAALKFVAVGTRTRVMFLSTFYSMRSDDLSSLCGPVIDDVKLLSVRKP*