Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317720 | XP_003594309.1 | 98.795 | 166 | 2 | 0 | 1 | 166 | 1 | 166 | 1.91e-113 | 329 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317720 | sp|Q9FIK8|CAR11_ARATH | 69.880 | 166 | 50 | 0 | 1 | 166 | 1 | 166 | 2.69e-83 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0317720 | 0.802221 | 6.219017e-49 | -8.615850e-47 |
| Msa0006070 | Msa0317720 | 0.800422 | 1.452003e-48 | -8.615850e-47 |
| Msa0037570 | Msa0317720 | -0.806334 | 8.649736e-50 | -8.615850e-47 |
| Msa0037880 | Msa0317720 | 0.817026 | 4.082677e-52 | -8.615850e-47 |
| Msa0044260 | Msa0317720 | 0.815767 | 7.807625e-52 | -8.615850e-47 |
| Msa0044330 | Msa0317720 | 0.819617 | 1.057132e-52 | -8.615850e-47 |
| Msa0063350 | Msa0317720 | -0.809488 | 1.846329e-50 | -8.615850e-47 |
| Msa0068740 | Msa0317720 | -0.820895 | 5.386495e-53 | -8.615850e-47 |
| Msa0075880 | Msa0317720 | 0.825776 | 3.898380e-54 | -8.615850e-47 |
| Msa0078900 | Msa0317720 | 0.807784 | 4.267256e-50 | -8.615850e-47 |
| Msa0089820 | Msa0317720 | 0.811745 | 6.002805e-51 | -8.615850e-47 |
| Msa0100090 | Msa0317720 | 0.820833 | 5.566423e-53 | -8.615850e-47 |
| Msa0114060 | Msa0317720 | 0.823615 | 1.259363e-53 | -8.615850e-47 |
| Msa0129190 | Msa0317720 | -0.805984 | 1.025300e-49 | -8.615850e-47 |
| Msa0136070 | Msa0317720 | 0.816719 | 4.783697e-52 | -8.615850e-47 |
| Msa0140500 | Msa0317720 | -0.800035 | 1.740603e-48 | -8.615850e-47 |
| Msa0147250 | Msa0317720 | 0.819565 | 1.086572e-52 | -8.615850e-47 |
| Msa0150800 | Msa0317720 | 0.809835 | 1.554728e-50 | -8.615850e-47 |
| Msa0150840 | Msa0317720 | 0.832598 | 8.626391e-56 | -8.615850e-47 |
| Msa0160550 | Msa0317720 | 0.800068 | 1.714076e-48 | -8.615850e-47 |
| Msa0171540 | Msa0317720 | 0.808709 | 2.710762e-50 | -8.615850e-47 |
| Msa0173990 | Msa0317720 | 0.816203 | 6.241781e-52 | -8.615850e-47 |
| Msa0180500 | Msa0317720 | 0.821801 | 3.328511e-53 | -8.615850e-47 |
| Msa0187250 | Msa0317720 | 0.801241 | 9.878751e-49 | -8.615850e-47 |
| Msa0197660 | Msa0317720 | 0.851309 | 9.653947e-61 | -8.615850e-47 |
| Msa0208090 | Msa0317720 | 0.802275 | 6.062203e-49 | -8.615850e-47 |
| Msa0228070 | Msa0317720 | 0.802793 | 4.739336e-49 | -8.615850e-47 |
| Msa0239800 | Msa0317720 | 0.843480 | 1.365837e-58 | -8.615850e-47 |
| Msa0260680 | Msa0317720 | 0.827984 | 1.156586e-54 | -8.615850e-47 |
| Msa0264150 | Msa0317720 | 0.817477 | 3.232388e-52 | -8.615850e-47 |
| Msa0265380 | Msa0317720 | 0.813381 | 2.634877e-51 | -8.615850e-47 |
| Msa0267370 | Msa0317720 | 0.806595 | 7.623403e-50 | -8.615850e-47 |
| Msa0271530 | Msa0317720 | 0.800227 | 1.590957e-48 | -8.615850e-47 |
| Msa0277820 | Msa0317720 | 0.816451 | 5.494241e-52 | -8.615850e-47 |
| Msa0280090 | Msa0317720 | 0.822450 | 2.353603e-53 | -8.615850e-47 |
| Msa0285450 | Msa0317720 | 0.815119 | 1.088515e-51 | -8.615850e-47 |
| Msa0288100 | Msa0317720 | 0.807458 | 5.006623e-50 | -8.615850e-47 |
| Msa0289250 | Msa0317720 | 0.813588 | 2.372354e-51 | -8.615850e-47 |
| Msa0303360 | Msa0317720 | 0.800236 | 1.584333e-48 | -8.615850e-47 |
| Msa0306210 | Msa0317720 | -0.812105 | 5.012299e-51 | -8.615850e-47 |
| Msa0316900 | Msa0317720 | 0.804145 | 2.486207e-49 | -8.615850e-47 |
| Msa0317510 | Msa0317720 | 0.839388 | 1.632681e-57 | -8.615850e-47 |
| Msa0317720 | Msa0317750 | 0.968584 | 6.924171e-129 | -8.615850e-47 |
| Msa0317720 | Msa0319170 | 0.819965 | 8.803332e-53 | -8.615850e-47 |
| Msa0317720 | Msa0326520 | 0.803681 | 3.104718e-49 | -8.615850e-47 |
| Msa0317720 | Msa0340450 | 0.829316 | 5.510715e-55 | -8.615850e-47 |
| Msa0317720 | Msa0350990 | 0.804948 | 1.690695e-49 | -8.615850e-47 |
| Msa0317720 | Msa0351030 | 0.816833 | 4.510062e-52 | -8.615850e-47 |
| Msa0317720 | Msa0351100 | 0.802029 | 6.811400e-49 | -8.615850e-47 |
| Msa0317720 | Msa0359030 | 0.808814 | 2.573976e-50 | -8.615850e-47 |
| Msa0317720 | Msa0379640 | 0.805225 | 1.478991e-49 | -8.615850e-47 |
| Msa0317720 | Msa0383800 | 0.829379 | 5.319821e-55 | -8.615850e-47 |
| Msa0317720 | Msa0390400 | -0.811210 | 7.845984e-51 | -8.615850e-47 |
| Msa0317720 | Msa0412840 | 0.827945 | 1.181584e-54 | -8.615850e-47 |
| Msa0317720 | Msa0416300 | 0.810232 | 1.276895e-50 | -8.615850e-47 |
| Msa0317720 | Msa0428080 | 0.809265 | 2.060643e-50 | -8.615850e-47 |
| Msa0317720 | Msa0431060 | 0.800577 | 1.350380e-48 | -8.615850e-47 |
| Msa0317720 | Msa0434180 | 0.831197 | 1.913614e-55 | -8.615850e-47 |
| Msa0317720 | Msa0435690 | 0.830735 | 2.483403e-55 | -8.615850e-47 |
| Msa0317720 | Msa0436760 | 0.837017 | 6.661214e-57 | -8.615850e-47 |
| Msa0317720 | Msa0442200 | 0.801468 | 8.875567e-49 | -8.615850e-47 |
| Msa0317720 | Msa0443920 | 0.813850 | 2.077742e-51 | -8.615850e-47 |
| Msa0317720 | Msa0453330 | 0.814643 | 1.387722e-51 | -8.615850e-47 |
| Msa0317720 | Msa0457510 | 0.814088 | 1.840913e-51 | -8.615850e-47 |
| Msa0317720 | Msa0466390 | 0.801472 | 8.859757e-49 | -8.615850e-47 |
| Msa0317720 | Msa0477130 | -0.813134 | 2.985130e-51 | -8.615850e-47 |
| Msa0317720 | Msa0479660 | 0.827064 | 1.923239e-54 | -8.615850e-47 |
| Msa0317720 | Msa0484720 | 0.805369 | 1.380029e-49 | -8.615850e-47 |
| Msa0317720 | Msa0498650 | 0.805306 | 1.422737e-49 | -8.615850e-47 |
| Msa0317720 | Msa0512750 | 0.805111 | 1.562757e-49 | -8.615850e-47 |
| Msa0317720 | Msa0529890 | 0.809558 | 1.783051e-50 | -8.615850e-47 |
| Msa0317720 | Msa0530400 | 0.807824 | 4.184390e-50 | -8.615850e-47 |
| Msa0317720 | Msa0545700 | 0.800020 | 1.752941e-48 | -8.615850e-47 |
| Msa0317720 | Msa0548920 | 0.814563 | 1.445666e-51 | -8.615850e-47 |
| Msa0317720 | Msa0558690 | 0.809011 | 2.336074e-50 | -8.615850e-47 |
| Msa0317720 | Msa0585230 | 0.800552 | 1.366038e-48 | -8.615850e-47 |
| Msa0317720 | Msa0598160 | 0.802283 | 6.038866e-49 | -8.615850e-47 |
| Msa0317720 | Msa0610430 | 0.804079 | 2.565710e-49 | -8.615850e-47 |
| Msa0317720 | Msa0621490 | 0.815077 | 1.111892e-51 | -8.615850e-47 |
| Msa0317720 | Msa0625720 | 0.803869 | 2.837185e-49 | -8.615850e-47 |
| Msa0317720 | Msa0632740 | 0.811347 | 7.328129e-51 | -8.615850e-47 |
| Msa0317720 | Msa0637900 | 0.818285 | 2.123482e-52 | -8.615850e-47 |
| Msa0317720 | Msa0657610 | 0.806154 | 9.439309e-50 | -8.615850e-47 |
| Msa0317720 | Msa0661190 | -0.840520 | 8.278330e-58 | -8.615850e-47 |
| Msa0317720 | Msa0673460 | 0.814035 | 1.891360e-51 | -8.615850e-47 |
| Msa0317720 | Msa0679290 | -0.803259 | 3.795873e-49 | -8.615850e-47 |
| Msa0317720 | Msa0688480 | 0.800366 | 1.490871e-48 | -8.615850e-47 |
| Msa0317720 | Msa0703780 | 0.810730 | 9.966061e-51 | -8.615850e-47 |
| Msa0317720 | Msa0705190 | 0.803134 | 4.030021e-49 | -8.615850e-47 |
| Msa0317720 | Msa0715470 | 0.805798 | 1.121504e-49 | -8.615850e-47 |
| Msa0317720 | Msa0715700 | 0.814625 | 1.400304e-51 | -8.615850e-47 |
| Msa0317720 | Msa0716840 | 0.801914 | 7.189265e-49 | -8.615850e-47 |
| Msa0317720 | Msa0731940 | 0.826668 | 2.390317e-54 | -8.615850e-47 |
| Msa0317720 | Msa0743720 | 0.813371 | 2.647767e-51 | -8.615850e-47 |
| Msa0317720 | Msa0744170 | -0.824912 | 6.241378e-54 | -8.615850e-47 |
| Msa0317720 | Msa0745790 | 0.800287 | 1.547135e-48 | -8.615850e-47 |
| Msa0317720 | Msa0748730 | 0.807872 | 4.087383e-50 | -8.615850e-47 |
| Msa0317720 | Msa0773840 | 0.806499 | 7.984908e-50 | -8.615850e-47 |
| Msa0317720 | Msa0777230 | 0.800131 | 1.664564e-48 | -8.615850e-47 |
| Msa0317720 | Msa0784380 | 0.816136 | 6.461656e-52 | -8.615850e-47 |
| Msa0317720 | Msa0804230 | 0.800292 | 1.543264e-48 | -8.615850e-47 |
| Msa0317720 | Msa0809960 | 0.801556 | 8.515040e-49 | -8.615850e-47 |
| Msa0317720 | Msa0810220 | 0.812097 | 5.031324e-51 | -8.615850e-47 |
| Msa0317720 | Msa0820850 | 0.835769 | 1.383775e-56 | -8.615850e-47 |
| Msa0317720 | Msa0831850 | 0.803561 | 3.287064e-49 | -8.615850e-47 |
| Msa0317720 | Msa0835800 | 0.809427 | 1.902330e-50 | -8.615850e-47 |
| Msa0317720 | Msa0849030 | 0.801269 | 9.750888e-49 | -8.615850e-47 |
| Msa0317720 | Msa0857640 | 0.824108 | 9.648996e-54 | -8.615850e-47 |
| Msa0317720 | Msa0861130 | 0.828083 | 1.094706e-54 | -8.615850e-47 |
| Msa0317720 | Msa0871270 | 0.822483 | 2.311938e-53 | -8.615850e-47 |
| Msa0317720 | Msa0909110 | 0.801355 | 9.363025e-49 | -8.615850e-47 |
| Msa0317720 | Msa0936300 | 0.818276 | 2.133267e-52 | -8.615850e-47 |
| Msa0317720 | Msa0938220 | 0.821759 | 3.403935e-53 | -8.615850e-47 |
| Msa0317720 | Msa0942550 | -0.824399 | 8.242301e-54 | -8.615850e-47 |
| Msa0317720 | Msa0942560 | -0.809999 | 1.433382e-50 | -8.615850e-47 |
| Msa0317720 | Msa0960740 | 0.810268 | 1.253935e-50 | -8.615850e-47 |
| Msa0317720 | Msa0973100 | 0.808697 | 2.727319e-50 | -8.615850e-47 |
| Msa0317720 | Msa0993290 | 0.806797 | 6.907414e-50 | -8.615850e-47 |
| Msa0317720 | Msa0993600 | 0.815724 | 7.984229e-52 | -8.615850e-47 |
| Msa0317720 | Msa0998690 | 0.807520 | 4.855210e-50 | -8.615850e-47 |
| Msa0317720 | Msa1003620 | 0.817706 | 2.869264e-52 | -8.615850e-47 |
| Msa0317720 | Msa1012830 | 0.802964 | 4.369749e-49 | -8.615850e-47 |
| Msa0317720 | Msa1014540 | 0.832518 | 9.031378e-56 | -8.615850e-47 |
| Msa0317720 | Msa1023120 | 0.822713 | 2.045015e-53 | -8.615850e-47 |
| Msa0317720 | Msa1031470 | -0.809394 | 1.933963e-50 | -8.615850e-47 |
| Msa0317720 | Msa1033410 | -0.837179 | 6.053715e-57 | -8.615850e-47 |
| Msa0317720 | Msa1036710 | -0.803787 | 2.950475e-49 | -8.615850e-47 |
| Msa0317720 | Msa1046020 | 0.804738 | 1.870184e-49 | -8.615850e-47 |
| Msa0317720 | Msa1046060 | 0.819471 | 1.141468e-52 | -8.615850e-47 |
| Msa0317720 | Msa1046460 | 0.820855 | 5.502669e-53 | -8.615850e-47 |
| Msa0317720 | Msa1052330 | 0.842604 | 2.335775e-58 | -8.615850e-47 |
| Msa0317720 | Msa1063510 | 0.820929 | 5.289529e-53 | -8.615850e-47 |
| Msa0317720 | Msa1073070 | -0.819086 | 1.396720e-52 | -8.615850e-47 |
| Msa0317720 | Msa1082500 | 0.807973 | 3.890044e-50 | -8.615850e-47 |
| Msa0317720 | Msa1082580 | 0.818687 | 1.720738e-52 | -8.615850e-47 |
| Msa0317720 | Msa1091100 | 0.801490 | 8.783737e-49 | -8.615850e-47 |
| Msa0317720 | Msa1111870 | 0.812169 | 4.852236e-51 | -8.615850e-47 |
| Msa0317720 | Msa1119480 | 0.802626 | 5.130421e-49 | -8.615850e-47 |
| Msa0317720 | Msa1124410 | 0.804219 | 2.399946e-49 | -8.615850e-47 |
| Msa0317720 | Msa1124540 | -0.809708 | 1.655613e-50 | -8.615850e-47 |
| Msa0317720 | Msa1131220 | 0.810317 | 1.223989e-50 | -8.615850e-47 |
| Msa0317720 | Msa1154280 | 0.836060 | 1.167734e-56 | -8.615850e-47 |
| Msa0317720 | Msa1157150 | 0.800608 | 1.330987e-48 | -8.615850e-47 |
| Msa0317720 | Msa1162780 | 0.809790 | 1.589849e-50 | -8.615850e-47 |
| Msa0317720 | Msa1167340 | 0.807294 | 5.423839e-50 | -8.615850e-47 |
| Msa0317720 | Msa1172400 | 0.815481 | 9.043575e-52 | -8.615850e-47 |
| Msa0317720 | Msa1174040 | 0.805144 | 1.538522e-49 | -8.615850e-47 |
| Msa0317720 | Msa1181250 | 0.805792 | 1.125241e-49 | -8.615850e-47 |
| Msa0317720 | Msa1193290 | 0.800912 | 1.153628e-48 | -8.615850e-47 |
| Msa0317720 | Msa1202770 | -0.805141 | 1.540391e-49 | -8.615850e-47 |
| Msa0317720 | Msa1203250 | 0.802359 | 5.824565e-49 | -8.615850e-47 |
| Msa0317720 | Msa1210910 | 0.812777 | 3.574551e-51 | -8.615850e-47 |
| Msa0317720 | Msa1211140 | -0.844504 | 7.257351e-59 | -8.615850e-47 |
| Msa0317720 | Msa1215920 | 0.812476 | 4.159736e-51 | -8.615850e-47 |
| Msa0317720 | Msa1217430 | -0.807896 | 4.039765e-50 | -8.615850e-47 |
| Msa0317720 | Msa1228590 | 0.812544 | 4.019267e-51 | -8.615850e-47 |
| Msa0317720 | Msa1238930 | 0.837301 | 5.635759e-57 | -8.615850e-47 |
| Msa0317720 | Msa1244250 | 0.820903 | 5.362566e-53 | -8.615850e-47 |
| Msa0317720 | Msa1246510 | 0.802722 | 4.901652e-49 | -8.615850e-47 |
| Msa0317720 | Msa1249490 | 0.812790 | 3.549929e-51 | -8.615850e-47 |
| Msa0317720 | Msa1259300 | 0.813664 | 2.282645e-51 | -8.615850e-47 |
| Msa0317720 | Msa1259590 | -0.816661 | 4.929059e-52 | -8.615850e-47 |
| Msa0317720 | Msa1267060 | 0.805901 | 1.067081e-49 | -8.615850e-47 |
| Msa0317720 | Msa1276440 | 0.802761 | 4.811981e-49 | -8.615850e-47 |
| Msa0317720 | Msa1277660 | 0.817258 | 3.619550e-52 | -8.615850e-47 |
| Msa0317720 | Msa1284680 | 0.804639 | 1.961011e-49 | -8.615850e-47 |
| Msa0317720 | Msa1287460 | 0.803735 | 3.025677e-49 | -8.615850e-47 |
| Msa0317720 | Msa1299290 | -0.840149 | 1.034848e-57 | -8.615850e-47 |
| Msa0317720 | Msa1305190 | 0.801862 | 7.370724e-49 | -8.615850e-47 |
| Msa0317720 | Msa1305340 | 0.822001 | 2.991935e-53 | -8.615850e-47 |
| Msa0317720 | Msa1320410 | 0.826859 | 2.152262e-54 | -8.615850e-47 |
| Msa0317720 | Msa1332040 | -0.831882 | 1.297415e-55 | -8.615850e-47 |
| Msa0317720 | Msa1344130 | 0.808088 | 3.677526e-50 | -8.615850e-47 |
| Msa0317720 | Msa1348890 | 0.801289 | 9.658408e-49 | -8.615850e-47 |
| Msa0317720 | Msa1358670 | 0.834197 | 3.444573e-56 | -8.615850e-47 |
| Msa0317720 | Msa1362880 | 0.816790 | 4.610867e-52 | -8.615850e-47 |
| Msa0317720 | Msa1374470 | 0.819577 | 1.079405e-52 | -8.615850e-47 |
| Msa0317720 | Msa1395660 | 0.806478 | 8.069197e-50 | -8.615850e-47 |
| Msa0317720 | Msa1403340 | 0.833802 | 4.325668e-56 | -8.615850e-47 |
| Msa0317720 | Msa1410100 | 0.812111 | 4.996199e-51 | -8.615850e-47 |
| Msa0317720 | Msa1412640 | 0.811031 | 8.577659e-51 | -8.615850e-47 |
| Msa0317720 | Msa1424750 | 0.809898 | 1.506767e-50 | -8.615850e-47 |
| Msa0317720 | Msa1430680 | 0.805067 | 1.596178e-49 | -8.615850e-47 |
| Msa0317720 | Msa1445610 | -0.800453 | 1.431329e-48 | -8.615850e-47 |
| Msa0317720 | Msa1449340 | -0.817182 | 3.765668e-52 | -8.615850e-47 |
| Msa0317720 | Msa1455490 | 0.813775 | 2.158193e-51 | -8.615850e-47 |
| Msa0317720 | Msa1466540 | 0.817886 | 2.612968e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317720 | MtrunA17_Chr2g0290631 | 98.795 | 166 | 2 | 0 | 1 | 166 | 1 | 166 | 1.76e-117 | 329 |
| Msa0317720 | MtrunA17_Chr8g0380381 | 47.239 | 163 | 73 | 2 | 1 | 157 | 85 | 240 | 8.18e-43 | 142 |
| Msa0317720 | MtrunA17_Chr3g0111361 | 43.949 | 157 | 86 | 1 | 1 | 157 | 1 | 155 | 1.99e-39 | 131 |
| Msa0317720 | MtrunA17_Chr2g0280981 | 43.137 | 153 | 85 | 1 | 5 | 157 | 4 | 154 | 3.23e-39 | 130 |
| Msa0317720 | MtrunA17_Chr2g0292461 | 45.860 | 157 | 84 | 1 | 1 | 157 | 168 | 323 | 6.36e-38 | 132 |
| Msa0317720 | MtrunA17_Chr8g0393081 | 42.675 | 157 | 88 | 1 | 1 | 157 | 17 | 171 | 7.47e-37 | 125 |
| Msa0317720 | MtrunA17_Chr6g0478401 | 40.764 | 157 | 91 | 2 | 1 | 157 | 13 | 167 | 9.49e-37 | 125 |
| Msa0317720 | MtrunA17_Chr8g0352751 | 43.949 | 157 | 87 | 1 | 1 | 157 | 1 | 156 | 3.26e-35 | 120 |
| Msa0317720 | MtrunA17_Chr3g0083541 | 46.497 | 157 | 83 | 1 | 1 | 157 | 239 | 394 | 6.24e-35 | 125 |
| Msa0317720 | MtrunA17_Chr4g0043861 | 39.474 | 152 | 90 | 1 | 1 | 152 | 1 | 150 | 2.03e-30 | 108 |
| Msa0317720 | MtrunA17_Chr1g0160811 | 42.953 | 149 | 82 | 2 | 5 | 152 | 6 | 152 | 2.10e-30 | 108 |
| Msa0317720 | MtrunA17_Chr8g0350031 | 36.458 | 96 | 59 | 2 | 6 | 99 | 4 | 99 | 5.47e-12 | 60.1 |
| Msa0317720 | MtrunA17_Chr6g0484401 | 38.053 | 113 | 61 | 5 | 7 | 113 | 484 | 593 | 2.13e-11 | 61.2 |
| Msa0317720 | MtrunA17_Chr8g0350021 | 36.264 | 91 | 56 | 2 | 6 | 94 | 4 | 94 | 4.06e-11 | 57.8 |
| Msa0317720 | MtrunA17_Chr1g0168851 | 35.556 | 90 | 56 | 2 | 6 | 93 | 127 | 216 | 4.19e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317720 | AT5G47710.1 | 69.880 | 166 | 50 | 0 | 1 | 166 | 1 | 166 | 2.74e-84 | 245 |
| Msa0317720 | AT5G47710.2 | 69.880 | 166 | 50 | 0 | 1 | 166 | 1 | 166 | 2.74e-84 | 245 |
| Msa0317720 | AT5G47710.3 | 69.880 | 166 | 50 | 0 | 1 | 166 | 1 | 166 | 2.74e-84 | 245 |
| Msa0317720 | AT5G47710.4 | 69.880 | 166 | 50 | 0 | 1 | 166 | 1 | 166 | 2.74e-84 | 245 |
| Msa0317720 | AT1G70790.3 | 46.154 | 156 | 82 | 2 | 5 | 159 | 6 | 160 | 7.01e-40 | 133 |
| Msa0317720 | AT1G70790.2 | 46.154 | 156 | 82 | 2 | 5 | 159 | 6 | 160 | 7.01e-40 | 133 |
| Msa0317720 | AT1G70790.1 | 46.154 | 156 | 82 | 2 | 5 | 159 | 6 | 160 | 7.01e-40 | 133 |
| Msa0317720 | AT1G73580.1 | 44.586 | 157 | 85 | 1 | 1 | 157 | 4 | 158 | 8.71e-39 | 130 |
| Msa0317720 | AT2G01540.1 | 44.156 | 154 | 84 | 2 | 5 | 157 | 6 | 158 | 1.09e-37 | 127 |
| Msa0317720 | AT4G05330.2 | 45.223 | 157 | 85 | 1 | 1 | 157 | 140 | 295 | 1.10e-37 | 131 |
| Msa0317720 | AT4G05330.3 | 45.223 | 157 | 85 | 1 | 1 | 157 | 175 | 330 | 4.59e-37 | 130 |
| Msa0317720 | AT4G05330.1 | 45.223 | 157 | 85 | 1 | 1 | 157 | 175 | 330 | 4.59e-37 | 130 |
| Msa0317720 | AT3G17980.1 | 42.038 | 157 | 89 | 2 | 1 | 157 | 13 | 167 | 5.26e-37 | 125 |
| Msa0317720 | AT5G37740.1 | 41.139 | 158 | 92 | 1 | 1 | 157 | 1 | 158 | 6.57e-37 | 125 |
| Msa0317720 | AT4G21160.2 | 43.949 | 157 | 87 | 1 | 1 | 157 | 176 | 331 | 6.57e-37 | 130 |
| Msa0317720 | AT4G21160.3 | 43.949 | 157 | 87 | 1 | 1 | 157 | 176 | 331 | 6.57e-37 | 130 |
| Msa0317720 | AT4G21160.1 | 43.949 | 157 | 87 | 1 | 1 | 157 | 176 | 331 | 6.57e-37 | 130 |
| Msa0317720 | AT4G21160.4 | 43.949 | 157 | 87 | 1 | 1 | 157 | 176 | 331 | 6.57e-37 | 130 |
| Msa0317720 | AT1G66360.1 | 39.490 | 157 | 95 | 0 | 1 | 157 | 1 | 157 | 2.14e-36 | 124 |
| Msa0317720 | AT1G70810.1 | 41.401 | 157 | 90 | 2 | 1 | 157 | 1 | 155 | 6.43e-36 | 122 |
| Msa0317720 | AT3G07940.1 | 45.860 | 157 | 84 | 1 | 1 | 157 | 224 | 379 | 4.47e-35 | 126 |
| Msa0317720 | AT1G48590.4 | 40.127 | 157 | 92 | 2 | 1 | 157 | 6 | 160 | 2.58e-34 | 119 |
| Msa0317720 | AT1G48590.1 | 40.127 | 157 | 92 | 2 | 1 | 157 | 6 | 160 | 2.58e-34 | 119 |
| Msa0317720 | AT1G23140.1 | 37.576 | 165 | 101 | 2 | 1 | 165 | 1 | 163 | 4.67e-34 | 118 |
| Msa0317720 | AT1G48590.2 | 40.127 | 157 | 92 | 2 | 1 | 157 | 37 | 191 | 5.11e-34 | 119 |
| Msa0317720 | AT5G37740.2 | 38.690 | 168 | 92 | 2 | 1 | 157 | 1 | 168 | 1.94e-33 | 117 |
| Msa0317720 | AT1G70800.1 | 36.943 | 157 | 97 | 1 | 1 | 157 | 10 | 164 | 1.71e-31 | 112 |
| Msa0317720 | AT1G70790.4 | 42.975 | 121 | 67 | 2 | 40 | 159 | 4 | 123 | 7.11e-27 | 99.4 |
| Msa0317720 | AT1G48590.3 | 32.484 | 157 | 72 | 3 | 1 | 157 | 37 | 159 | 8.79e-20 | 81.6 |
Find 60 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGAAAAGTTGTGATTTA+TGG | 0.068719 | 2_4:-15666261 | Msa0317720:three_prime_UTR |
| CCTTATGTTGTTCTCAAATT+AGG | 0.114099 | 2_4:-15667488 | Msa0317720:CDS |
| TTTGAAAGCTGATGACAAAA+TGG | 0.206431 | 2_4:-15666701 | Msa0317720:CDS |
| TGATTGAGTATGAGAATTTA+TGG | 0.234568 | 2_4:+15668443 | None:intergenic |
| AGTTCTAATTGCATAGGTTT+AGG | 0.235916 | 2_4:-15666109 | Msa0317720:three_prime_UTR |
| GTTCTAATTGCATAGGTTTA+GGG | 0.287937 | 2_4:-15666108 | Msa0317720:three_prime_UTR |
| ATTATAATGAGTGAACAATT+AGG | 0.300153 | 2_4:-15667575 | Msa0317720:exon |
| ACCCTTGGGAGTTCTCAATT+TGG | 0.326299 | 2_4:-15667095 | Msa0317720:intron |
| CAATTCTCTCTTATCTAATC+AGG | 0.328553 | 2_4:+15666297 | None:intergenic |
| CTTCCGGTGAACAAACATTA+AGG | 0.352544 | 2_4:-15666612 | Msa0317720:CDS |
| GTTGTGATTTATGGCTTCTC+TGG | 0.365327 | 2_4:-15666252 | Msa0317720:three_prime_UTR |
| TGTTCTCAAATTAGGAAATC+AGG | 0.369709 | 2_4:-15667480 | Msa0317720:intron |
| TGATATTCTTCATTATTCAT+TGG | 0.382002 | 2_4:-15668401 | Msa0317720:intron |
| CCTAATTTGAGAACAACATA+AGG | 0.397853 | 2_4:+15667488 | None:intergenic |
| GCGCGGTTGTGCAGAATGTT+TGG | 0.408048 | 2_4:-15666528 | Msa0317720:CDS |
| ATAGCTGTTTGAATCCGGTT+TGG | 0.419279 | 2_4:-15667147 | Msa0317720:CDS |
| AAGGGAAAAGGTTGGTGATC+CGG | 0.421394 | 2_4:-15667529 | Msa0317720:CDS |
| TTGAAAGCTGATGACAAAAT+GGG | 0.427442 | 2_4:-15666700 | Msa0317720:CDS |
| AGCAGTATCAATTGTGTTAA+CGG | 0.427721 | 2_4:-15666550 | Msa0317720:CDS |
| TAAATTGCATTATAATATGC+AGG | 0.429332 | 2_4:+15666323 | None:intergenic |
| CATTAATAGCTGTTTGAATC+CGG | 0.434724 | 2_4:-15667152 | Msa0317720:CDS |
| TTATAATGAGTGAACAATTA+GGG | 0.440831 | 2_4:-15667574 | Msa0317720:exon |
| TTTCTCTTTGACAGAACCCT+TGG | 0.442241 | 2_4:-15667110 | Msa0317720:CDS |
| TTCAGCTCTTCATTCCAAAC+CGG | 0.443481 | 2_4:+15667133 | None:intergenic |
| TTGTGCAGAATGTTTGGTTA+AGG | 0.448350 | 2_4:-15666522 | Msa0317720:CDS |
| TGAGAATTTATGGAAGGGAT+TGG | 0.458155 | 2_4:+15668453 | None:intergenic |
| AATCGAGCTGCAGAGACTAA+TGG | 0.466284 | 2_4:+15666655 | None:intergenic |
| TTCTCTTTGACAGAACCCTT+GGG | 0.470160 | 2_4:-15667109 | Msa0317720:CDS |
| AGGGAAAAGGTTGGTGATCC+GGG | 0.470972 | 2_4:-15667528 | Msa0317720:CDS |
| CAAACAGCTATTAATGACCT+TGG | 0.491295 | 2_4:+15667159 | None:intergenic |
| GAGTGTCAATTCTATCTCTC+CGG | 0.491542 | 2_4:+15666483 | None:intergenic |
| CTGCAGAGACTAATGGTTGA+AGG | 0.508368 | 2_4:+15666662 | None:intergenic |
| TCATAGTTGTGCAAGGGAAA+AGG | 0.522477 | 2_4:-15667541 | Msa0317720:CDS |
| CTTCCTTAATGTTTGTTCAC+CGG | 0.524733 | 2_4:+15666609 | None:intergenic |
| GATCACTGGTCTTGAAATCC+CGG | 0.525136 | 2_4:+15667510 | None:intergenic |
| GAATTTATGGAAGGGATTGG+TGG | 0.528275 | 2_4:+15668456 | None:intergenic |
| TGAGTATGAGAATTTATGGA+AGG | 0.534908 | 2_4:+15668447 | None:intergenic |
| CTATTAAGGAAGTAGAGTAA+AGG | 0.537305 | 2_4:-15666069 | Msa0317720:three_prime_UTR |
| AGGCTCCGTGAAGTAGAATC+CGG | 0.538501 | 2_4:-15666502 | Msa0317720:CDS |
| TCTCTCCGGATTCTACTTCA+CGG | 0.540740 | 2_4:+15666497 | None:intergenic |
| CTTTGACCACCTGTAGCTGC+AGG | 0.552730 | 2_4:-15668506 | Msa0317720:five_prime_UTR |
| CAATTAGAACTCATTAATCA+AGG | 0.553464 | 2_4:+15666121 | None:intergenic |
| TTAATGAGTTCTAATTGCAT+AGG | 0.556403 | 2_4:-15666115 | Msa0317720:three_prime_UTR |
| GAGAACAACATAAGGATCAC+TGG | 0.556443 | 2_4:+15667496 | None:intergenic |
| AAATTGCATTATAATATGCA+GGG | 0.557931 | 2_4:+15666324 | None:intergenic |
| TGAACAATTAGGGCAGCTAA+AGG | 0.572900 | 2_4:-15667564 | Msa0317720:CDS |
| GAGTATGAGAATTTATGGAA+GGG | 0.583980 | 2_4:+15668448 | None:intergenic |
| TTCTAATTGCATAGGTTTAG+GGG | 0.585355 | 2_4:-15666107 | Msa0317720:three_prime_UTR |
| CTACTTCAAAATAGTGCAGA+GGG | 0.588994 | 2_4:-15666441 | Msa0317720:exon |
| CTAAAGGTCATAGTTGTGCA+AGG | 0.591043 | 2_4:-15667548 | Msa0317720:CDS |
| CACCAAATTGAGAACTCCCA+AGG | 0.596444 | 2_4:+15667093 | None:intergenic |
| TTGGTGGAACGTGAAGAAGC+AGG | 0.607051 | 2_4:+15668472 | None:intergenic |
| CTGCAGCTACAGGTGGTCAA+AGG | 0.607125 | 2_4:+15668507 | None:intergenic |
| TAAAGGTCATAGTTGTGCAA+GGG | 0.629000 | 2_4:-15667547 | Msa0317720:CDS |
| CGGTGAACAAACATTAAGGA+AGG | 0.629985 | 2_4:-15666608 | Msa0317720:CDS |
| AGTTGTGCAAGGGAAAAGGT+TGG | 0.639430 | 2_4:-15667537 | Msa0317720:CDS |
| ACCAAATTGAGAACTCCCAA+GGG | 0.650902 | 2_4:+15667094 | None:intergenic |
| GCTACTTCAAAATAGTGCAG+AGG | 0.656916 | 2_4:-15666442 | Msa0317720:exon |
| GTAACAGACTGCAAAGACCA+AGG | 0.686957 | 2_4:-15667176 | Msa0317720:intron |
| TATCAATTGTGTTAACGGCG+CGG | 0.708048 | 2_4:-15666545 | Msa0317720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTATTTTATTTAATG+TGG | - | chr2_4:15666362-15666381 | Msa0317720:three_prime_UTR | 10.0% |
| !!! | TTGATAATTCAATTAAATAA+TGG | + | chr2_4:15666431-15666450 | None:intergenic | 10.0% |
| !!! | ATTCAATTAAATAATGGATA+TGG | + | chr2_4:15666425-15666444 | None:intergenic | 15.0% |
| !!! | TATTATTTCATTTTCATCTT+AGG | - | chr2_4:15667140-15667159 | Msa0317720:CDS | 15.0% |
| !!! | TATTTTTGTATTGACTATTA+AGG | - | chr2_4:15668503-15668522 | Msa0317720:five_prime_UTR | 15.0% |
| !! | TGATATTCTTCATTATTCAT+TGG | - | chr2_4:15666185-15666204 | Msa0317720:three_prime_UTR | 20.0% |
| !! | TTATTTAATGTGGATTTACT+TGG | - | chr2_4:15666372-15666391 | Msa0317720:three_prime_UTR | 20.0% |
| !!! | ATTGATATTTTCATTTGTGT+TGG | + | chr2_4:15666918-15666937 | None:intergenic | 20.0% |
| !!! | CGATTAATTATTTAACTTGT+TGG | - | chr2_4:15666983-15667002 | Msa0317720:intron | 20.0% |
| !!! | TAATTATTTAACTTGTTGGT+AGG | - | chr2_4:15666987-15667006 | Msa0317720:intron | 20.0% |
| !! | ATTATAATGAGTGAACAATT+AGG | - | chr2_4:15667011-15667030 | Msa0317720:intron | 20.0% |
| !! | TTATAATGAGTGAACAATTA+GGG | - | chr2_4:15667012-15667031 | Msa0317720:intron | 20.0% |
| !! | GAATGAATCATTTAATATTG+AGG | + | chr2_4:15667382-15667401 | None:intergenic | 20.0% |
| !! | AAATTGCATTATAATATGCA+GGG | + | chr2_4:15668265-15668284 | None:intergenic | 20.0% |
| !! | TAAATTGCATTATAATATGC+AGG | + | chr2_4:15668266-15668285 | None:intergenic | 20.0% |
| !! | AAATGAAAAGTTGTGATTTA+TGG | - | chr2_4:15668325-15668344 | Msa0317720:intron | 20.0% |
| ! | TGATTGAGTATGAGAATTTA+TGG | + | chr2_4:15666146-15666165 | None:intergenic | 25.0% |
| ! | TTTCTCTACTAGAATATTCA+TGG | - | chr2_4:15666614-15666633 | Msa0317720:CDS | 25.0% |
| !! | TGATTTTCATGTAATTTTGC+TGG | - | chr2_4:15666675-15666694 | Msa0317720:CDS | 25.0% |
| !!! | TGTTCTTTTTTGTCCTTTTT+GGG | - | chr2_4:15666729-15666748 | Msa0317720:intron | 25.0% |
| !! | ATTTATCTTTTGACCCAAAA+AGG | + | chr2_4:15666745-15666764 | None:intergenic | 25.0% |
| ! | GTTTGTTTATCTTCACATTA+AGG | - | chr2_4:15667162-15667181 | Msa0317720:CDS | 25.0% |
| ! | TGGCATTGTAAATAAATACT+AGG | + | chr2_4:15667524-15667543 | None:intergenic | 25.0% |
| ! | ATTTACAATGCCATGTTTAT+TGG | - | chr2_4:15667531-15667550 | Msa0317720:CDS | 25.0% |
| ! | CTCTAACACAAGAATAAATA+AGG | + | chr2_4:15667762-15667781 | None:intergenic | 25.0% |
| ! | AATGCAACTCAGTTATATAT+AGG | + | chr2_4:15667835-15667854 | None:intergenic | 25.0% |
| ! | CAATTAGAACTCATTAATCA+AGG | + | chr2_4:15668468-15668487 | None:intergenic | 25.0% |
| !! | TTAATGAGTTCTAATTGCAT+AGG | - | chr2_4:15668471-15668490 | Msa0317720:five_prime_UTR | 25.0% |
| GAGTATGAGAATTTATGGAA+GGG | + | chr2_4:15666141-15666160 | None:intergenic | 30.0% | |
| TGAGTATGAGAATTTATGGA+AGG | + | chr2_4:15666142-15666161 | None:intergenic | 30.0% | |
| TAATGTGGATTTACTTGGTT+AGG | - | chr2_4:15666377-15666396 | Msa0317720:three_prime_UTR | 30.0% | |
| !!! | CTGTTCTTTTTTGTCCTTTT+TGG | - | chr2_4:15666728-15666747 | Msa0317720:intron | 30.0% |
| AACCAAAAGCAGTAAACAAA+AGG | + | chr2_4:15666799-15666818 | None:intergenic | 30.0% | |
| ! | TGGTACAAATCTTTGAAAAC+AGG | + | chr2_4:15666898-15666917 | None:intergenic | 30.0% |
| TTGTTCACTCATATATTCAG+GGG | + | chr2_4:15666950-15666969 | None:intergenic | 30.0% | |
| GTTGTTCACTCATATATTCA+GGG | + | chr2_4:15666951-15666970 | None:intergenic | 30.0% | |
| AGTTGTTCACTCATATATTC+AGG | + | chr2_4:15666952-15666971 | None:intergenic | 30.0% | |
| GAATATATGAGTGAACAACT+AGG | - | chr2_4:15666952-15666971 | Msa0317720:intron | 30.0% | |
| CCTAATTTGAGAACAACATA+AGG | + | chr2_4:15667101-15667120 | None:intergenic | 30.0% | |
| CCTTATGTTGTTCTCAAATT+AGG | - | chr2_4:15667098-15667117 | Msa0317720:CDS | 30.0% | |
| TGTTCTCAAATTAGGAAATC+AGG | - | chr2_4:15667106-15667125 | Msa0317720:CDS | 30.0% | |
| CTTCACATTAAGGACATATT+TGG | - | chr2_4:15667172-15667191 | Msa0317720:CDS | 30.0% | |
| ATTGCTAAAAAAACACCTGT+TGG | - | chr2_4:15667241-15667260 | Msa0317720:intron | 30.0% | |
| TGCATCTTCTAAGTTTAATG+TGG | + | chr2_4:15667319-15667338 | None:intergenic | 30.0% | |
| CATTAATAGCTGTTTGAATC+CGG | - | chr2_4:15667434-15667453 | Msa0317720:intron | 30.0% | |
| GCAAAAAAGACCAATAAACA+TGG | + | chr2_4:15667544-15667563 | None:intergenic | 30.0% | |
| !!! | GTTTATTGGTCTTTTTTGCT+TGG | - | chr2_4:15667545-15667564 | Msa0317720:CDS | 30.0% |
| GGTATCTACATGTTGTATAT+CGG | - | chr2_4:15667570-15667589 | Msa0317720:CDS | 30.0% | |
| TTAATCTGTTTATCCGATCA+TGG | - | chr2_4:15667809-15667828 | Msa0317720:intron | 30.0% | |
| AGTTATATATAGGCCATGAT+CGG | + | chr2_4:15667825-15667844 | None:intergenic | 30.0% | |
| TTTGAAAGCTGATGACAAAA+TGG | - | chr2_4:15667885-15667904 | Msa0317720:intron | 30.0% | |
| TTGAAAGCTGATGACAAAAT+GGG | - | chr2_4:15667886-15667905 | Msa0317720:intron | 30.0% | |
| AGCAGTATCAATTGTGTTAA+CGG | - | chr2_4:15668036-15668055 | Msa0317720:intron | 30.0% | |
| CAATTCTCTCTTATCTAATC+AGG | + | chr2_4:15668292-15668311 | None:intergenic | 30.0% | |
| ! | AGTTCTAATTGCATAGGTTT+AGG | - | chr2_4:15668477-15668496 | Msa0317720:five_prime_UTR | 30.0% |
| GTTCTAATTGCATAGGTTTA+GGG | - | chr2_4:15668478-15668497 | Msa0317720:five_prime_UTR | 30.0% | |
| TTCTAATTGCATAGGTTTAG+GGG | - | chr2_4:15668479-15668498 | Msa0317720:five_prime_UTR | 30.0% | |
| CTATTAAGGAAGTAGAGTAA+AGG | - | chr2_4:15668517-15668536 | Msa0317720:five_prime_UTR | 30.0% | |
| TGAGAATTTATGGAAGGGAT+TGG | + | chr2_4:15666136-15666155 | None:intergenic | 35.0% | |
| TAGTTCATCTCTGACATACT+TGG | - | chr2_4:15666309-15666328 | Msa0317720:three_prime_UTR | 35.0% | |
| !! | GTCCTTTTGTTTACTGCTTT+TGG | - | chr2_4:15666794-15666813 | Msa0317720:intron | 35.0% |
| AATCAATGCATTGCATAGAC+AGG | + | chr2_4:15666829-15666848 | None:intergenic | 35.0% | |
| !! | ATGCATTGATTCCTCTCAAA+AGG | - | chr2_4:15666838-15666857 | Msa0317720:intron | 35.0% |
| !! | TGCATTGATTCCTCTCAAAA+GGG | - | chr2_4:15666839-15666858 | Msa0317720:intron | 35.0% |
| ! | GAAACTATTTCCCTTTTGAG+AGG | + | chr2_4:15666852-15666871 | None:intergenic | 35.0% |
| ATGAATAATGTATGCCATGG+TGG | + | chr2_4:15666874-15666893 | None:intergenic | 35.0% | |
| GGAATGAATAATGTATGCCA+TGG | + | chr2_4:15666877-15666896 | None:intergenic | 35.0% | |
| TGTTCACTCATATATTCAGG+GGG | + | chr2_4:15666949-15666968 | None:intergenic | 35.0% | |
| TAAAGGTCATAGTTGTGCAA+GGG | - | chr2_4:15667039-15667058 | Msa0317720:intron | 35.0% | |
| ATTGCTGATCAGAAACTGTT+TGG | - | chr2_4:15667211-15667230 | Msa0317720:intron | 35.0% | |
| TTGCTGATCAGAAACTGTTT+GGG | - | chr2_4:15667212-15667231 | Msa0317720:intron | 35.0% | |
| AATACACTTAACATGCCAAC+AGG | + | chr2_4:15667259-15667278 | None:intergenic | 35.0% | |
| CAAACAGCTATTAATGACCT+TGG | + | chr2_4:15667430-15667449 | None:intergenic | 35.0% | |
| !!! | ATTGGTCTTTTTTGCTTGGA+AGG | - | chr2_4:15667549-15667568 | Msa0317720:CDS | 35.0% |
| !! | TAAGCACTGATGAGATTGTT+TGG | - | chr2_4:15667631-15667650 | Msa0317720:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCA+TGG | + | chr2_4:15667721-15667740 | None:intergenic | 35.0% |
| !!! | CTGAGTTGCATTTTGACTAT+AGG | - | chr2_4:15667843-15667862 | Msa0317720:intron | 35.0% |
| !! | GACATTTTAAGAGTCTCTTC+CGG | - | chr2_4:15667958-15667977 | Msa0317720:intron | 35.0% |
| CTTCCTTAATGTTTGTTCAC+CGG | + | chr2_4:15667980-15667999 | None:intergenic | 35.0% | |
| TTGTGCAGAATGTTTGGTTA+AGG | - | chr2_4:15668064-15668083 | Msa0317720:intron | 35.0% | |
| !!! | CACTATTTTGAAGTAGCAAC+AGG | + | chr2_4:15668141-15668160 | None:intergenic | 35.0% |
| CTACTTCAAAATAGTGCAGA+GGG | - | chr2_4:15668145-15668164 | Msa0317720:intron | 35.0% | |
| GAATTTATGGAAGGGATTGG+TGG | + | chr2_4:15666133-15666152 | None:intergenic | 40.0% | |
| TTCATCTCTGACATACTTGG+TGG | - | chr2_4:15666312-15666331 | Msa0317720:three_prime_UTR | 40.0% | |
| AAGGGAAATAGTTTCCACCA+TGG | - | chr2_4:15666857-15666876 | Msa0317720:intron | 40.0% | |
| GTTCACTCATATATTCAGGG+GGG | + | chr2_4:15666948-15666967 | None:intergenic | 40.0% | |
| TGAACAATTAGGGCAGCTAA+AGG | - | chr2_4:15667022-15667041 | Msa0317720:intron | 40.0% | |
| CTAAAGGTCATAGTTGTGCA+AGG | - | chr2_4:15667038-15667057 | Msa0317720:intron | 40.0% | |
| TCATAGTTGTGCAAGGGAAA+AGG | - | chr2_4:15667045-15667064 | Msa0317720:intron | 40.0% | |
| GAGAACAACATAAGGATCAC+TGG | + | chr2_4:15667093-15667112 | None:intergenic | 40.0% | |
| ATAGCTGTTTGAATCCGGTT+TGG | - | chr2_4:15667439-15667458 | Msa0317720:intron | 40.0% | |
| TTCAGCTCTTCATTCCAAAC+CGG | + | chr2_4:15667456-15667475 | None:intergenic | 40.0% | |
| TTTCTCTTTGACAGAACCCT+TGG | - | chr2_4:15667476-15667495 | Msa0317720:intron | 40.0% | |
| TTCTCTTTGACAGAACCCTT+GGG | - | chr2_4:15667477-15667496 | Msa0317720:intron | 40.0% | |
| ACCAAATTGAGAACTCCCAA+GGG | + | chr2_4:15667495-15667514 | None:intergenic | 40.0% | |
| CTTCCGGTGAACAAACATTA+AGG | - | chr2_4:15667974-15667993 | Msa0317720:intron | 40.0% | |
| CGGTGAACAAACATTAAGGA+AGG | - | chr2_4:15667978-15667997 | Msa0317720:intron | 40.0% | |
| ! | ACAAGACAGTTTTCAGAGTC+AGG | + | chr2_4:15668009-15668028 | None:intergenic | 40.0% |
| TATCAATTGTGTTAACGGCG+CGG | - | chr2_4:15668041-15668060 | Msa0317720:intron | 40.0% | |
| GAGTGTCAATTCTATCTCTC+CGG | + | chr2_4:15668106-15668125 | None:intergenic | 40.0% | |
| !!! | TTTTGAAGTAGCAACAGGTG+TGG | + | chr2_4:15668136-15668155 | None:intergenic | 40.0% |
| GCTACTTCAAAATAGTGCAG+AGG | - | chr2_4:15668144-15668163 | Msa0317720:intron | 40.0% | |
| GTTGTGATTTATGGCTTCTC+TGG | - | chr2_4:15668334-15668353 | Msa0317720:intron | 40.0% | |
| !!! | GTTTTTTCACCTGCAGCTAC+AGG | + | chr2_4:15666092-15666111 | None:intergenic | 45.0% |
| AGTTGTGCAAGGGAAAAGGT+TGG | - | chr2_4:15667049-15667068 | Msa0317720:intron | 45.0% | |
| !! | AAGGGAAAAGGTTGGTGATC+CGG | - | chr2_4:15667057-15667076 | Msa0317720:intron | 45.0% |
| !! | GATCACTGGTCTTGAAATCC+CGG | + | chr2_4:15667079-15667098 | None:intergenic | 45.0% |
| GTAACAGACTGCAAAGACCA+AGG | - | chr2_4:15667410-15667429 | Msa0317720:intron | 45.0% | |
| ACCCTTGGGAGTTCTCAATT+TGG | - | chr2_4:15667491-15667510 | Msa0317720:CDS | 45.0% | |
| CACCAAATTGAGAACTCCCA+AGG | + | chr2_4:15667496-15667515 | None:intergenic | 45.0% | |
| AAGCTATCATGGAGAGCTTG+TGG | + | chr2_4:15667710-15667729 | None:intergenic | 45.0% | |
| CTGCAGAGACTAATGGTTGA+AGG | + | chr2_4:15667927-15667946 | None:intergenic | 45.0% | |
| AATCGAGCTGCAGAGACTAA+TGG | + | chr2_4:15667934-15667953 | None:intergenic | 45.0% | |
| TCTCTCCGGATTCTACTTCA+CGG | + | chr2_4:15668092-15668111 | None:intergenic | 45.0% | |
| ! | TTTTCACCTGCAGCTACAGG+TGG | + | chr2_4:15666089-15666108 | None:intergenic | 50.0% |
| TTGGTGGAACGTGAAGAAGC+AGG | + | chr2_4:15666117-15666136 | None:intergenic | 50.0% | |
| !! | AGGGAAAAGGTTGGTGATCC+GGG | - | chr2_4:15667058-15667077 | Msa0317720:intron | 50.0% |
| AGGCTCCGTGAAGTAGAATC+CGG | - | chr2_4:15668084-15668103 | Msa0317720:intron | 50.0% | |
| CTGCAGCTACAGGTGGTCAA+AGG | + | chr2_4:15666082-15666101 | None:intergenic | 55.0% | |
| CTTTGACCACCTGTAGCTGC+AGG | - | chr2_4:15666080-15666099 | Msa0317720:three_prime_UTR | 55.0% | |
| GCGCGGTTGTGCAGAATGTT+TGG | - | chr2_4:15668058-15668077 | Msa0317720:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 15666068 | 15668540 | 15666068 | ID=Msa0317720;Name=Msa0317720 |
| chr2_4 | mRNA | 15666068 | 15668540 | 15666068 | ID=Msa0317720-mRNA-1;Parent=Msa0317720;Name=Msa0317720-mRNA-1;_AED=0.12;_eAED=0.12;_QI=147|1|1|1|0.66|0.5|4|382|166 |
| chr2_4 | exon | 15666068 | 15666743 | 15666068 | ID=Msa0317720-mRNA-1:exon:5840;Parent=Msa0317720-mRNA-1 |
| chr2_4 | exon | 15667096 | 15667191 | 15667096 | ID=Msa0317720-mRNA-1:exon:5839;Parent=Msa0317720-mRNA-1 |
| chr2_4 | exon | 15667481 | 15667599 | 15667481 | ID=Msa0317720-mRNA-1:exon:5838;Parent=Msa0317720-mRNA-1 |
| chr2_4 | exon | 15668402 | 15668540 | 15668402 | ID=Msa0317720-mRNA-1:exon:5837;Parent=Msa0317720-mRNA-1 |
| chr2_4 | five_prime_UTR | 15668402 | 15668540 | 15668402 | ID=Msa0317720-mRNA-1:five_prime_utr;Parent=Msa0317720-mRNA-1 |
| chr2_4 | five_prime_UTR | 15667592 | 15667599 | 15667592 | ID=Msa0317720-mRNA-1:five_prime_utr;Parent=Msa0317720-mRNA-1 |
| chr2_4 | CDS | 15667481 | 15667591 | 15667481 | ID=Msa0317720-mRNA-1:cds;Parent=Msa0317720-mRNA-1 |
| chr2_4 | CDS | 15667096 | 15667191 | 15667096 | ID=Msa0317720-mRNA-1:cds;Parent=Msa0317720-mRNA-1 |
| chr2_4 | CDS | 15666450 | 15666743 | 15666450 | ID=Msa0317720-mRNA-1:cds;Parent=Msa0317720-mRNA-1 |
| chr2_4 | three_prime_UTR | 15666068 | 15666449 | 15666068 | ID=Msa0317720-mRNA-1:three_prime_utr;Parent=Msa0317720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
