AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0207700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207700 MtrunA17_Chr2g0306791 99.713 348 1 0 1 348 1 348 0.0 718
Msa0207700 MtrunA17_Chr7g0250671 92.442 172 12 1 167 337 1 172 4.18e-105 306
Msa0207700 MtrunA17_Chr2g0322171 30.841 321 190 8 9 301 3 319 2.82e-38 139
Msa0207700 MtrunA17_Chr1g0185501 25.685 292 203 9 15 297 26 312 2.47e-18 84.3
Msa0207700 MtrunA17_Chr8g0383711 26.087 276 193 8 30 299 29 299 1.23e-16 79.3
Msa0207700 MtrunA17_Chr4g0067151 23.567 314 213 10 4 297 15 321 5.85e-15 74.7
Msa0207700 MtrunA17_Chr7g0253861 26.000 300 160 9 10 296 92 342 6.49e-14 72.0
Msa0207700 MtrunA17_Chr6g0448921 28.042 189 130 6 112 297 27 212 1.48e-13 72.0
Msa0207700 MtrunA17_Chr3g0095501 23.711 291 201 9 21 297 272 555 2.32e-13 71.2
Msa0207700 MtrunA17_Chr3g0144511 25.843 267 174 8 56 299 60 325 9.95e-13 68.6
Msa0207700 MtrunA17_Chr5g0405851 28.571 203 138 5 14 213 251 449 1.72e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0207700 AT3G15610.1 79.710 345 62 1 1 345 1 337 0.0 567
Msa0207700 AT1G52730.1 80.000 345 63 1 1 345 1 339 0.0 564
Msa0207700 AT1G52730.2 80.000 345 63 1 1 345 1 339 0.0 564
Msa0207700 AT1G15470.1 76.807 332 71 1 9 340 4 329 0.0 543
Msa0207700 AT1G52730.3 86.364 264 36 0 1 264 1 264 2.04e-168 470
Msa0207700 AT1G15470.2 83.137 255 43 0 9 263 4 258 1.16e-162 456
Msa0207700 AT2G46290.1 29.448 326 180 8 9 296 30 343 2.35e-39 143
Msa0207700 AT2G46280.2 30.189 318 188 8 9 296 3 316 2.76e-34 129
Msa0207700 AT2G46280.1 30.189 318 188 8 9 296 3 316 2.76e-34 129
Msa0207700 AT2G46280.3 30.488 246 150 7 9 237 3 244 7.01e-22 93.6
Msa0207700 AT3G49660.1 26.441 295 200 8 15 297 23 312 5.08e-21 92.4
Msa0207700 AT4G02730.1 30.078 256 161 12 54 297 36 285 6.15e-17 81.3
Msa0207700 AT4G02730.1 26.165 279 194 10 30 298 54 330 2.08e-15 76.6
Msa0207700 AT5G08560.1 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0207700 AT5G08560.2 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0207700 AT5G08560.3 24.765 319 218 11 21 322 276 589 1.91e-14 74.7
Msa0207700 AT5G64730.1 22.993 274 202 7 30 298 29 298 1.38e-13 70.9
Msa0207700 AT2G43770.1 24.503 302 205 12 10 296 47 340 2.67e-13 70.5
Msa0207700 AT2G01330.1 23.167 341 197 12 15 297 187 520 1.74e-12 68.9
Msa0207700 AT1G71840.1 26.718 262 174 11 49 297 58 314 4.39e-12 67.4
Msa0207700 AT3G18130.1 24.068 295 185 9 14 300 61 324 7.09e-12 66.2
Msa0207700 AT1G48630.1 24.407 295 184 9 14 300 61 324 2.75e-11 64.3
Msa0207700 AT5G23430.1 26.984 189 132 6 112 297 27 212 8.21e-11 63.9
Msa0207700 AT5G23430.3 26.984 189 132 6 112 297 27 212 8.66e-11 63.9
Msa0207700 AT5G23430.2 26.984 189 132 6 112 297 27 212 8.66e-11 63.9

Find 155 sgRNAs with CRISPR-Local

Find 498 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAAAGCTCTGGAAATTT+TGG 0.049365 2_1:+40336954 None:intergenic
AGTGCTGTTGTTGTTCCTTT+AGG 0.148846 2_1:-40336841 Msa0207700:five_prime_UTR
GTTCAAATATCATGCTAAAA+TGG 0.151511 2_1:+40330902 None:intergenic
GTGCTGTTGTTGTTCCTTTA+GGG 0.200212 2_1:-40336840 Msa0207700:five_prime_UTR
CTCTTCCTTTCCTTTGGACT+TGG 0.240542 2_1:+40330980 None:intergenic
GGAAAACAATGGCAAGAAAA+AGG 0.241394 2_1:+40330924 None:intergenic
ATGGTTCTACTGTCAAGTTT+TGG 0.261085 2_1:-40331971 Msa0207700:CDS
CCCCGCCTCTTCCTTTCCTT+TGG 0.282864 2_1:+40330974 None:intergenic
ATTGAGTTCATGTACTGATA+TGG 0.286538 2_1:-40332253 Msa0207700:CDS
GGGGATTTATCCACTTCTTT+AGG 0.292998 2_1:+40332321 None:intergenic
CTCCTCTTACGCTGTCGTTC+TGG 0.295788 2_1:+40337214 None:intergenic
TTTCCAGAGCTTTGAGGGTT+AGG 0.323955 2_1:-40336948 Msa0207700:five_prime_UTR
GGTTTGTGTGCAGCAAAGTT+TGG 0.345909 2_1:-40333096 Msa0207700:intron
AACAAACTTGTTACCAAACT+TGG 0.348142 2_1:+40331794 None:intergenic
GGTAAATTAGAACGATAAAA+TGG 0.350011 2_1:+40337061 None:intergenic
TCAGGGAGTTTGTGGGATAC+TGG 0.354569 2_1:-40330758 Msa0207700:three_prime_UTR
GAGAGGAAGGGCCAGGGCGC+AGG 0.355400 2_1:+40337124 None:intergenic
CACTGTGTCCGGTTCTCTCC+TGG 0.356259 2_1:-40331179 Msa0207700:CDS
AAAGTTTGGGATGCATTAAC+AGG 0.357474 2_1:-40333082 Msa0207700:CDS
TGCTGTTTGGAGTTGTTGTT+TGG 0.358064 2_1:-40336360 Msa0207700:CDS
GAGCTGGGAGAGGAAGGGCC+AGG 0.366606 2_1:+40337117 None:intergenic
AAGAAACCATCAGGAGTAAC+AGG 0.368685 2_1:+40336681 None:intergenic
CAAAATTTCCAGAGCTTTGA+GGG 0.370100 2_1:-40336953 Msa0207700:five_prime_UTR
TAGCATGATATTTGAACCTT+GGG 0.370757 2_1:-40330896 Msa0207700:three_prime_UTR
ACAAGAAATGAAATGATTGA+TGG 0.376047 2_1:+40336868 None:intergenic
TTTGGTAACAAGTTTGTTGC+TGG 0.381118 2_1:-40331789 Msa0207700:CDS
GCCGATTCAAATCATAAATT+CGG 0.388321 2_1:+40332355 None:intergenic
GTTTGTGTGCAGCAAAGTTT+GGG 0.396138 2_1:-40333095 Msa0207700:intron
TTCAAATATCATGCTAAAAT+GGG 0.407848 2_1:+40330903 None:intergenic
GCTTCGTTAGAGCCCAAGTT+TGG 0.408433 2_1:-40331807 Msa0207700:CDS
AAGGGCATAAAGGTGCTGTT+TGG 0.408519 2_1:-40336373 Msa0207700:CDS
GGAACATTTGAAGGGCATAA+AGG 0.410447 2_1:-40336383 Msa0207700:CDS
AGGATGGAACCATCAGAATA+TGG 0.410704 2_1:-40331130 Msa0207700:CDS
TACAGTCCTGTTACTCCTGA+TGG 0.412838 2_1:-40336687 Msa0207700:CDS
ATGAATTGACGAGCTGGTTA+AGG 0.413167 2_1:-40330809 Msa0207700:three_prime_UTR
AAGGGCCAGGGCGCAGGGAT+TGG 0.419389 2_1:+40337130 None:intergenic
CCAAAATTTCCAGAGCTTTG+AGG 0.419724 2_1:-40336954 Msa0207700:five_prime_UTR
TCCGAATTTATGATTTGAAT+CGG 0.420073 2_1:-40332356 Msa0207700:CDS
ATACTAATCATGTATATTAG+AGG 0.421571 2_1:+40330872 None:intergenic
TTCCATACGGGTGATGAGAT+TGG 0.422877 2_1:-40331735 Msa0207700:intron
GATTGGATTGGAACATTTGA+AGG 0.427455 2_1:-40336392 Msa0207700:CDS
GCGACTTGGTGTCAAGTGTC+TGG 0.437902 2_1:+40332045 None:intergenic
AAACGGTAACGGCGGTGTTA+CGG 0.443634 2_1:+40336891 None:intergenic
GAGGTTTCGCGCAGGATTGA+GGG 0.446305 2_1:-40331023 Msa0207700:CDS
GACTAGTGCTGAAGTGAGTC+AGG 0.452988 2_1:-40332018 Msa0207700:CDS
TATTCTGATGGTTCCATCCT+CGG 0.456186 2_1:+40331133 None:intergenic
GTCCAGAACGACAGCGTAAG+AGG 0.465943 2_1:-40337216 Msa0207700:five_prime_UTR
TTTACTCAGATTCATTATGT+TGG 0.466142 2_1:+40330684 None:intergenic
GTATAAGAGAGCAGGTCATA+AGG 0.467876 2_1:-40337157 Msa0207700:five_prime_UTR
TTAGCATGATATTTGAACCT+TGG 0.468326 2_1:-40330897 Msa0207700:three_prime_UTR
GCAACACTCCTGACTGAACC+AGG 0.469039 2_1:+40332300 None:intergenic
ACTTCTTTAGGAGGTGCATC+AGG 0.470919 2_1:+40332333 None:intergenic
GAAGGCAAATGCAGAGGAGG+AGG 0.475882 2_1:-40331042 Msa0207700:CDS
GGAATGGAGAGACTGGAGAT+TGG 0.482165 2_1:-40336409 Msa0207700:CDS
AGAGGAAGGGCCAGGGCGCA+GGG 0.482324 2_1:+40337125 None:intergenic
AACACAGAGCTGGGAGAGGA+AGG 0.483612 2_1:+40337111 None:intergenic
GGAGGAGAATCGTATGCATC+AGG 0.485943 2_1:-40331158 Msa0207700:CDS
GGAGGTTTCGCGCAGGATTG+AGG 0.486264 2_1:-40331024 Msa0207700:CDS
CTAATAAGAAAGAAACCATC+AGG 0.486855 2_1:+40336672 None:intergenic
TTGAGTTCATGTACTGATAT+GGG 0.489256 2_1:-40332252 Msa0207700:CDS
TTTAATTTCAGGGAGTTTGT+GGG 0.489273 2_1:-40330765 Msa0207700:three_prime_UTR
TTGGTAACAAGTTTGTTGCT+GGG 0.489658 2_1:-40331788 Msa0207700:CDS
GATGCATACGATTCTCCTCC+AGG 0.490054 2_1:+40331161 None:intergenic
AGCTGGGAGAGGAAGGGCCA+GGG 0.492838 2_1:+40337118 None:intergenic
ATTCTCCTCCAGGAGAGAAC+CGG 0.492972 2_1:+40331171 None:intergenic
ACCAAATGGAACCCTGGAAA+AGG 0.496038 2_1:-40331066 Msa0207700:CDS
CCTCCTAACCCTCAAAGCTC+TGG 0.501548 2_1:+40336945 None:intergenic
CTCACTTCAGCACTAGTCAT+AGG 0.502533 2_1:+40332023 None:intergenic
TCAGAGGGTTTATCACCAAA+TGG 0.504610 2_1:-40331080 Msa0207700:CDS
TACATGAACTCAATATAGTC+TGG 0.504684 2_1:+40332262 None:intergenic
CTCAGCGAGATATTCTCTGC+AGG 0.504716 2_1:+40330643 None:intergenic
CCCTGTCTGCCATATTCTGA+TGG 0.507125 2_1:+40331121 None:intergenic
ATGCTGAGGAATGGAGAGAC+TGG 0.507216 2_1:-40336416 Msa0207700:CDS
ACCATCAGAATATGGCAGAC+AGG 0.510525 2_1:-40331122 Msa0207700:CDS
ATGGTCCTGTACACTGTGTC+CGG 0.512630 2_1:-40331190 Msa0207700:CDS
AGGCTATGGGATGTAAGAAC+TGG 0.513301 2_1:-40332077 Msa0207700:CDS
GGGTAGAAGTAACACAGAGC+TGG 0.514465 2_1:+40337101 None:intergenic
GAGAATATCTCGCTGAGGGT+AGG 0.515228 2_1:-40330637 Msa0207700:three_prime_UTR
TCTGATTCATCATGAGTCAA+TGG 0.518807 2_1:+40331098 None:intergenic
GTTCAGTCAGGAGTGTTGCA+TGG 0.523714 2_1:-40332296 Msa0207700:CDS
GTTGATAATTCACAGGCTAT+GGG 0.524204 2_1:-40332090 Msa0207700:intron
CCAGAGCTTTGAGGGTTAGG+AGG 0.524290 2_1:-40336945 Msa0207700:five_prime_UTR
AATGAAATGATTGATGGAAA+CGG 0.526606 2_1:+40336874 None:intergenic
GATTTATCCACTTCTTTAGG+AGG 0.527221 2_1:+40332324 None:intergenic
GGAGAGACTGGAGATTGGAT+TGG 0.528885 2_1:-40336404 Msa0207700:CDS
CAAGTCCAAAGGAAAGGAAG+AGG 0.530035 2_1:-40330979 Msa0207700:CDS
GCAAACCAATCCCTGCGCCC+TGG 0.535809 2_1:-40337135 Msa0207700:five_prime_UTR
AGAATATCTCGCTGAGGGTA+GGG 0.535950 2_1:-40330636 Msa0207700:three_prime_UTR
TACCAATCTCATCACCCGTA+TGG 0.537790 2_1:+40331733 None:intergenic
CGCTATATTACAACTGCTGA+TGG 0.538929 2_1:-40331990 Msa0207700:CDS
ATGATTGATGGAAACGGTAA+CGG 0.543040 2_1:+40336880 None:intergenic
TCCAAAGGAAAGGAAGAGGC+GGG 0.544199 2_1:-40330975 Msa0207700:CDS
CTGTAAAAGAGATCAACAAC+TGG 0.548288 2_1:+40336705 None:intergenic
GACTAGTCGGACGGACGAGA+TGG 0.549462 2_1:+40337183 None:intergenic
AAAGAAGTGGATAAATCCCC+TGG 0.551218 2_1:-40332318 Msa0207700:CDS
TACTAATCATGTATATTAGA+GGG 0.553998 2_1:+40330873 None:intergenic
GCATGCAACAAAGGACATCA+TGG 0.555607 2_1:-40331209 Msa0207700:CDS
CAAAGGAAAGGAAGAGGCGG+GGG 0.556170 2_1:-40330973 Msa0207700:CDS
CCATCAGAATATGGCAGACA+GGG 0.557804 2_1:-40331121 Msa0207700:CDS
ATAAATCCCCTGGTTCAGTC+AGG 0.558779 2_1:-40332308 Msa0207700:CDS
GAGAACCGGACACAGTGTAC+AGG 0.559046 2_1:+40331185 None:intergenic
GGAGGCCAAGTCCAAAGGAA+AGG 0.561592 2_1:-40330985 Msa0207700:CDS
ACAAACTTGTTACCAAACTT+GGG 0.561688 2_1:+40331795 None:intergenic
GGTAGAAGTAACACAGAGCT+GGG 0.562530 2_1:+40337102 None:intergenic
TAGTCACAGTATAAGAGAGC+AGG 0.563549 2_1:-40337165 Msa0207700:five_prime_UTR
GTACTGATATGGGAGGCGTC+AGG 0.570966 2_1:-40332242 Msa0207700:intron
AGCACTAGTCATAGGCGACT+TGG 0.571425 2_1:+40332031 None:intergenic
ACGGTACCTCTTGTTTGTCA+CGG 0.573426 2_1:-40336738 Msa0207700:CDS
ACACAGAGCTGGGAGAGGAA+GGG 0.576011 2_1:+40337112 None:intergenic
AAGTAACACAGAGCTGGGAG+AGG 0.579612 2_1:+40337107 None:intergenic
TGGTAACAAGTTTGTTGCTG+GGG 0.580435 2_1:-40331787 Msa0207700:CDS
TTGATAGTATGAAACCCTAA+AGG 0.581487 2_1:+40336826 None:intergenic
CATGTATATTAGAGGGCCCA+AGG 0.588640 2_1:+40330880 None:intergenic
TGATGCACCTCCTAAAGAAG+TGG 0.589350 2_1:-40332331 Msa0207700:CDS
CATATAATGAATTGACGAGC+TGG 0.589827 2_1:-40330815 Msa0207700:three_prime_UTR
GGAGAAGGCAAATGCAGAGG+AGG 0.590265 2_1:-40331045 Msa0207700:CDS
GTCCAAAGGAAAGGAAGAGG+CGG 0.595374 2_1:-40330976 Msa0207700:CDS
ATTGGATTGGAACATTTGAA+GGG 0.596088 2_1:-40336391 Msa0207700:CDS
GCTAGTCCTATGCTGAGGAA+TGG 0.597073 2_1:-40336425 Msa0207700:CDS
GGTAACAAGTTTGTTGCTGG+GGG 0.598590 2_1:-40331786 Msa0207700:CDS
GAAGCTGATTCCACATTGCA+AGG 0.600142 2_1:+40331825 None:intergenic
GCAGAGGAGGCCAAGTCCAA+AGG 0.602036 2_1:-40330990 Msa0207700:CDS
TGGAACCCTGGAAAAGGAGA+AGG 0.603332 2_1:-40331060 Msa0207700:CDS
GTGATGGCAGCATGCAACAA+AGG 0.603771 2_1:-40331218 Msa0207700:intron
TATCTCGCTGAGGGTAGGGT+GGG 0.606981 2_1:-40330632 Msa0207700:three_prime_UTR
TATGCATCAGGATCCGAGGA+TGG 0.610567 2_1:-40331146 Msa0207700:CDS
TGCAGAGAATATCTCGCTGA+GGG 0.613151 2_1:-40330641 Msa0207700:three_prime_UTR
ATATCTCGCTGAGGGTAGGG+TGG 0.615757 2_1:-40330633 Msa0207700:three_prime_UTR
CAACACTCCTGACTGAACCA+GGG 0.615920 2_1:+40332301 None:intergenic
TTTATCACCAAATGGAACCC+TGG 0.617473 2_1:-40331072 Msa0207700:CDS
ATTGACTCATGATGAATCAG+AGG 0.620794 2_1:-40331096 Msa0207700:CDS
ATGCTAAAATGGGAAAACAA+TGG 0.621825 2_1:+40330913 None:intergenic
TCTCTTATACTGTGACTAGT+CGG 0.625942 2_1:+40337170 None:intergenic
GTCTCTCCATTCCTCAGCAT+AGG 0.627751 2_1:+40336419 None:intergenic
TTGACTCATGATGAATCAGA+GGG 0.630585 2_1:-40331095 Msa0207700:CDS
CCAAAGGAAAGGAAGAGGCG+GGG 0.631518 2_1:-40330974 Msa0207700:CDS
TTTCTTATTAGCGCAAGCAA+AGG 0.633591 2_1:-40336660 Msa0207700:intron
ATCGTATGCATCAGGATCCG+AGG 0.634906 2_1:-40331150 Msa0207700:CDS
TCAGCGAGATATTCTCTGCA+GGG 0.640286 2_1:+40330644 None:intergenic
AGTGCTGAAGTGAGTCAGGA+TGG 0.642357 2_1:-40332014 Msa0207700:CDS
CAGAGGAGGAGGTTTCGCGC+AGG 0.644543 2_1:-40331031 Msa0207700:CDS
GAGTGACCGTGACAAACAAG+AGG 0.644753 2_1:+40336732 None:intergenic
AACACTCCTGACTGAACCAG+GGG 0.647227 2_1:+40332302 None:intergenic
GGTGTTACGGAAAGTAACAC+AGG 0.651174 2_1:+40336904 None:intergenic
CTGCAGAGAATATCTCGCTG+AGG 0.663217 2_1:-40330642 Msa0207700:three_prime_UTR
TTATACTGTGACTAGTCGGA+CGG 0.668732 2_1:+40337174 None:intergenic
AAAGGAGAAGGCAAATGCAG+AGG 0.668862 2_1:-40331048 Msa0207700:CDS
CTATGACATGCCTTGCAATG+TGG 0.670893 2_1:-40331835 Msa0207700:CDS
AATCTGAGTAAACAGAAATG+CGG 0.674121 2_1:-40330673 Msa0207700:three_prime_UTR
TGTGTCCGGTTCTCTCCTGG+AGG 0.681279 2_1:-40331176 Msa0207700:CDS
TAGATGCTAGTCCTATGCTG+AGG 0.696428 2_1:-40336430 Msa0207700:CDS
GTTACGGAAAGTAACACAGG+TGG 0.697830 2_1:+40336907 None:intergenic
AGTTCATGTACTGATATGGG+AGG 0.705266 2_1:-40332249 Msa0207700:CDS
TTACGGAAAGTAACACAGGT+GGG 0.720258 2_1:+40336908 None:intergenic
ATTGATGGAAACGGTAACGG+CGG 0.741225 2_1:+40336883 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTATTTTTTTTT+AGG - chr2_1:40330843-40330862 Msa0207700:three_prime_UTR 0.0%
!!! ATTTAATTTTGTTATTTTAG+TGG - chr2_1:40331391-40331410 Msa0207700:intron 10.0%
!!! TATAAACTCAATTTTTAAAT+TGG - chr2_1:40331951-40331970 Msa0207700:intron 10.0%
!! ATATATATTCTGTTAAAATT+TGG - chr2_1:40335371-40335390 Msa0207700:intron 10.0%
!! ATAAGAACAAATATTATAAA+CGG + chr2_1:40336347-40336366 None:intergenic 10.0%
!! TGTATATATTAAAAAATAGT+TGG + chr2_1:40336508-40336527 None:intergenic 10.0%
!! GTATATATTGATAAATATTA+CGG - chr2_1:40336625-40336644 Msa0207700:intron 10.0%
!!! TGGACAATTTTTTTTTTTTT+TGG + chr2_1:40330646-40330665 None:intergenic 15.0%
!! TGGTTAAAAAAGAAAAAAAT+GGG + chr2_1:40330799-40330818 None:intergenic 15.0%
!! ATGGTTAAAAAAGAAAAAAA+TGG + chr2_1:40330800-40330819 None:intergenic 15.0%
!! AAAGAATAAAATGTTAAATG+GGG + chr2_1:40332888-40332907 None:intergenic 15.0%
!! CAAAGAATAAAATGTTAAAT+GGG + chr2_1:40332889-40332908 None:intergenic 15.0%
!! ACAAAGAATAAAATGTTAAA+TGG + chr2_1:40332890-40332909 None:intergenic 15.0%
!! AAACATTTCTTATAATAACT+GGG - chr2_1:40334065-40334084 Msa0207700:intron 15.0%
!!! TGGTATTTATTTTCTATTTA+CGG + chr2_1:40334990-40335009 None:intergenic 15.0%
!!! TTTATGTTTGTTTTAATTTC+AGG - chr2_1:40337101-40337120 Msa0207700:five_prime_UTR 15.0%
!!! TTATGTTTGTTTTAATTTCA+GGG - chr2_1:40337102-40337121 Msa0207700:five_prime_UTR 15.0%
!! AATGGAAAAGAAAAAAGTTA+CGG - chr2_1:40331120-40331139 Msa0207700:CDS 20.0%
!!! TAATAGATCTGATCAATTTT+AGG - chr2_1:40331292-40331311 Msa0207700:intron 20.0%
!!! ATTTTTAAATTGGTAAGAGT+TGG - chr2_1:40331961-40331980 Msa0207700:CDS 20.0%
!! TAAAATCCTCATATAGTATT+AGG + chr2_1:40331987-40332006 None:intergenic 20.0%
!!! TATCTCAAAATGTTTCATTT+TGG + chr2_1:40332252-40332271 None:intergenic 20.0%
!!! TACTAGTATTATCTTTGTTT+TGG - chr2_1:40332608-40332627 Msa0207700:intron 20.0%
!!! CTAAAAAACAGTAGATTTTA+AGG + chr2_1:40332799-40332818 None:intergenic 20.0%
!!! TTACTAATTTTGTTTCCTTT+TGG - chr2_1:40332930-40332949 Msa0207700:intron 20.0%
!! ACAAAGTGATTTAGATTAAA+TGG + chr2_1:40333007-40333026 None:intergenic 20.0%
!! GAAACATTTCTTATAATAAC+TGG - chr2_1:40334064-40334083 Msa0207700:intron 20.0%
!!! AGTCAATTCAATTTTTTCAA+TGG - chr2_1:40334457-40334476 Msa0207700:intron 20.0%
!!! ATATTTGTTGGTATTCATTT+TGG - chr2_1:40334918-40334937 Msa0207700:intron 20.0%
!!! AATTTTGTGTTTTTGTCATT+AGG + chr2_1:40334960-40334979 None:intergenic 20.0%
!!! GGTATTTATTTTCTATTTAC+GGG + chr2_1:40334989-40335008 None:intergenic 20.0%
!! ATTGATGTTTGTATATATCT+GGG - chr2_1:40335453-40335472 Msa0207700:intron 20.0%
!! AATTCCATATAGGTAATAAT+AGG - chr2_1:40336436-40336455 Msa0207700:intron 20.0%
!!! ACTAAACTGATTTTTAAGTT+TGG - chr2_1:40336586-40336605 Msa0207700:intron 20.0%
!! TTCAAATATCATGCTAAAAT+GGG + chr2_1:40336977-40336996 None:intergenic 20.0%
!! TACTAATCATGTATATTAGA+GGG + chr2_1:40337007-40337026 None:intergenic 20.0%
!! ATACTAATCATGTATATTAG+AGG + chr2_1:40337008-40337027 None:intergenic 20.0%
!!! TTGTAAGTTTTAGTTTGTAT+TGG - chr2_1:40337038-40337057 Msa0207700:five_prime_UTR 20.0%
! GGTAAATTAGAACGATAAAA+TGG + chr2_1:40330819-40330838 None:intergenic 25.0%
! AACAAAAACAACAAGCAAAT+TGG + chr2_1:40330890-40330909 None:intergenic 25.0%
! AATGAAATGATTGATGGAAA+CGG + chr2_1:40331006-40331025 None:intergenic 25.0%
! ACAAGAAATGAAATGATTGA+TGG + chr2_1:40331012-40331031 None:intergenic 25.0%
!! TTGTGAGATTTTACAAGAAA+TGG - chr2_1:40331102-40331121 Msa0207700:CDS 25.0%
! AATTAAATGTTATCACGTGT+CGG + chr2_1:40331379-40331398 None:intergenic 25.0%
! TTTGTTAATTCAATGTGCAT+AGG - chr2_1:40331701-40331720 Msa0207700:intron 25.0%
!! AAGACAATAAACATTTTCAC+AGG + chr2_1:40331768-40331787 None:intergenic 25.0%
! TTTATTGTCTTATGCTTTAC+CGG - chr2_1:40331777-40331796 Msa0207700:CDS 25.0%
! CACACACATCTAATATAAAT+AGG - chr2_1:40331842-40331861 Msa0207700:CDS 25.0%
!! TGTTTAAATTGGACCTTTTT+GGG + chr2_1:40331876-40331895 None:intergenic 25.0%
!! CTTCTTTTACGTGTTTAAAT+TGG + chr2_1:40331887-40331906 None:intergenic 25.0%
! TAAAAGAAGTTCATAACCAA+TGG - chr2_1:40331898-40331917 Msa0207700:intron 25.0%
! AAACCTATAATGTAATGTGA+TGG + chr2_1:40332200-40332219 None:intergenic 25.0%
!!! GAAGATTTTGGGATTTAAAT+TGG + chr2_1:40332357-40332376 None:intergenic 25.0%
!! ATTGTTAACTCGAAGATTTT+GGG + chr2_1:40332368-40332387 None:intergenic 25.0%
!! AATTGTTAACTCGAAGATTT+TGG + chr2_1:40332369-40332388 None:intergenic 25.0%
! GCATAGTAATACTAGAATAA+GGG + chr2_1:40332581-40332600 None:intergenic 25.0%
! TGCATAGTAATACTAGAATA+AGG + chr2_1:40332582-40332601 None:intergenic 25.0%
!!! AGTATTATCTTTGTTTTGGT+AGG - chr2_1:40332612-40332631 Msa0207700:intron 25.0%
!! TAATTTTGCAGAACTGAAAA+GGG + chr2_1:40332683-40332702 None:intergenic 25.0%
!! TTAATTTTGCAGAACTGAAA+AGG + chr2_1:40332684-40332703 None:intergenic 25.0%
! TTCAGTTCTGCAAAATTAAT+TGG - chr2_1:40332685-40332704 Msa0207700:intron 25.0%
! ACAGAGAATAAAATGTTAAC+TGG + chr2_1:40332827-40332846 None:intergenic 25.0%
! AAATGGGGATTCATATTAAA+TGG + chr2_1:40332873-40332892 None:intergenic 25.0%
! TAAGAGCAGAAAATGTTAAA+TGG + chr2_1:40332978-40332997 None:intergenic 25.0%
! TGAGATTTACAATTCTGATT+GGG + chr2_1:40333393-40333412 None:intergenic 25.0%
! TTACATTATTGACAGAAGAA+AGG - chr2_1:40333758-40333777 Msa0207700:intron 25.0%
! TACATTATTGACAGAAGAAA+GGG - chr2_1:40333759-40333778 Msa0207700:intron 25.0%
! TTAATTGAATGCTGTACTAA+TGG + chr2_1:40333826-40333845 None:intergenic 25.0%
! TTAGTACAGCATTCAATTAA+TGG - chr2_1:40333826-40333845 Msa0207700:intron 25.0%
! ATAAAATGATGATCTTGGTT+AGG - chr2_1:40333866-40333885 Msa0207700:intron 25.0%
! TAAAATGATGATCTTGGTTA+GGG - chr2_1:40333867-40333886 Msa0207700:intron 25.0%
! TTCATGAGTGAATGTAAAAA+AGG - chr2_1:40334205-40334224 Msa0207700:intron 25.0%
! TCATGAGTGAATGTAAAAAA+GGG - chr2_1:40334206-40334225 Msa0207700:intron 25.0%
! AGGAATTCAATATTGAAAAG+TGG + chr2_1:40334407-40334426 None:intergenic 25.0%
! CAATATTGAATTCCTAAAAC+AGG - chr2_1:40334412-40334431 Msa0207700:intron 25.0%
!! GAAAGCATAATAATCCTAAT+GGG + chr2_1:40334489-40334508 None:intergenic 25.0%
!! TGAAAGCATAATAATCCTAA+TGG + chr2_1:40334490-40334509 None:intergenic 25.0%
! ACAATAATGACTAAGCAATA+TGG + chr2_1:40334541-40334560 None:intergenic 25.0%
! AATTAGCATGACATATTTGT+TGG - chr2_1:40334760-40334779 Msa0207700:intron 25.0%
!!! TTTATTTTCTATTTACGGGA+AGG + chr2_1:40334985-40335004 None:intergenic 25.0%
! ATGAAAATACTATAATCGCT+TGG + chr2_1:40335038-40335057 None:intergenic 25.0%
! CTTGCAGATACAATTTAATA+GGG + chr2_1:40335283-40335302 None:intergenic 25.0%
! CAATCAATTCATATGAACAA+AGG + chr2_1:40335437-40335456 None:intergenic 25.0%
! GATTGATGTTTGTATATATC+TGG - chr2_1:40335452-40335471 Msa0207700:intron 25.0%
! TCCGAATTTATGATTTGAAT+CGG - chr2_1:40335521-40335540 Msa0207700:intron 25.0%
! ATATACAAAAACGACAACAA+CGG + chr2_1:40335696-40335715 None:intergenic 25.0%
! TTTGATATAAACATGAAGCT+TGG - chr2_1:40335742-40335761 Msa0207700:intron 25.0%
! GTAAGTAACAATAAGTTAGT+TGG - chr2_1:40335940-40335959 Msa0207700:intron 25.0%
! CATAACCTTAAAAAAGAACA+TGG + chr2_1:40335966-40335985 None:intergenic 25.0%
!!! TCATGTTTTTGATTTCCATA+CGG - chr2_1:40336129-40336148 Msa0207700:intron 25.0%
! AGATCCTATTATTACCTATA+TGG + chr2_1:40336443-40336462 None:intergenic 25.0%
!! TAGGATCTAAAACCAAAATA+AGG - chr2_1:40336455-40336474 Msa0207700:intron 25.0%
!!! ATATGATTTGGTCCTTATTT+TGG + chr2_1:40336470-40336489 None:intergenic 25.0%
! AGAACATAGGAAATATGATT+TGG + chr2_1:40336482-40336501 None:intergenic 25.0%
! AAATCATATTTCCTATGTTC+TGG - chr2_1:40336481-40336500 Msa0207700:intron 25.0%
! GTTCAAATATCATGCTAAAA+TGG + chr2_1:40336978-40336997 None:intergenic 25.0%
! TTTACTCAGATTCATTATGT+TGG + chr2_1:40337196-40337215 None:intergenic 25.0%
! TTGATAGTATGAAACCCTAA+AGG + chr2_1:40331054-40331073 None:intergenic 30.0%
CTAATAAGAAAGAAACCATC+AGG + chr2_1:40331208-40331227 None:intergenic 30.0%
! ATTGGATTGGAACATTTGAA+GGG - chr2_1:40331486-40331505 Msa0207700:intron 30.0%
CACTAAACATACTGAAAGAA+AGG + chr2_1:40331610-40331629 None:intergenic 30.0%
! GTGTTTAAATTGGACCTTTT+TGG + chr2_1:40331877-40331896 None:intergenic 30.0%
!!! ACTCGTAAATTTTTTGCCAT+TGG + chr2_1:40331917-40331936 None:intergenic 30.0%
AAAAAATTTACGAGTCCTTG+TGG - chr2_1:40331922-40331941 Msa0207700:intron 30.0%
AAAAATTTACGAGTCCTTGT+GGG - chr2_1:40331923-40331942 Msa0207700:intron 30.0%
TTACCGTCATAAATGATATG+CGG - chr2_1:40332004-40332023 Msa0207700:CDS 30.0%
GATTACTTGATCAATCCAAA+TGG + chr2_1:40332047-40332066 None:intergenic 30.0%
GTTCCATCACATTACATTAT+AGG - chr2_1:40332194-40332213 Msa0207700:intron 30.0%
!! ACATACTTGTTGTCTAAACT+TGG - chr2_1:40332307-40332326 Msa0207700:CDS 30.0%
!! CATACTTGTTGTCTAAACTT+GGG - chr2_1:40332308-40332327 Msa0207700:CDS 30.0%
TAAACTTGGGTAAAATCCAT+AGG - chr2_1:40332321-40332340 Msa0207700:CDS 30.0%
!!! TATTTTTGGAGCAAAAAGAG+CGG + chr2_1:40332516-40332535 None:intergenic 30.0%
! AATTTTGCAGAACTGAAAAG+GGG + chr2_1:40332682-40332701 None:intergenic 30.0%
ATCTGTCATAAGATCGAAAT+GGG + chr2_1:40332762-40332781 None:intergenic 30.0%
GATTAAATGCTGAATCCAAA+AGG + chr2_1:40332948-40332967 None:intergenic 30.0%
TCAGTAAAGAACAAAGTGAA+GGG + chr2_1:40333072-40333091 None:intergenic 30.0%
TTCAGTAAAGAACAAAGTGA+AGG + chr2_1:40333073-40333092 None:intergenic 30.0%
GTCAATTATGAATACGATCA+AGG + chr2_1:40333222-40333241 None:intergenic 30.0%
AACCTTGTGAACTTATGATT+TGG + chr2_1:40333244-40333263 None:intergenic 30.0%
AAATCATAAGTTCACAAGGT+TGG - chr2_1:40333243-40333262 Msa0207700:intron 30.0%
GTGAGATTTACAATTCTGAT+TGG + chr2_1:40333394-40333413 None:intergenic 30.0%
ATCAGAATTGTAAATCTCAC+CGG - chr2_1:40333394-40333413 Msa0207700:intron 30.0%
! GAAGCATTATAGTGTTCTTT+AGG + chr2_1:40333493-40333512 None:intergenic 30.0%
AAAGAACACTATAATGCTTC+TGG - chr2_1:40333493-40333512 Msa0207700:intron 30.0%
TGTGGTATGCAATTATGTTT+GGG + chr2_1:40333668-40333687 None:intergenic 30.0%
TAATTTCTATGTGTCTAGTG+TGG + chr2_1:40333686-40333705 None:intergenic 30.0%
GTTGCATAAAATGATGATCT+TGG - chr2_1:40333861-40333880 Msa0207700:intron 30.0%
!!! GAGTAGTGAGGTTTTAAAAA+AGG - chr2_1:40333921-40333940 Msa0207700:intron 30.0%
AAAATTGCATCAAATACACC+CGG + chr2_1:40334010-40334029 None:intergenic 30.0%
! TGCAATTTTCTGCAATATCA+AGG - chr2_1:40334021-40334040 Msa0207700:intron 30.0%
TATAAGAAATGTTTCCACCA+CGG + chr2_1:40334059-40334078 None:intergenic 30.0%
ATACTAGTTGAGAAGTCATT+TGG + chr2_1:40334117-40334136 None:intergenic 30.0%
! TCATGCATTTTACATGTTTC+AGG + chr2_1:40334155-40334174 None:intergenic 30.0%
! CAGAAATCAATTCCTGTTTT+AGG + chr2_1:40334427-40334446 None:intergenic 30.0%
TTCAATGGTTTAAACCCATT+AGG - chr2_1:40334472-40334491 Msa0207700:intron 30.0%
TAATGACTAAGCAATATGGA+AGG + chr2_1:40334537-40334556 None:intergenic 30.0%
ATATCAGAGTGTGATACTAA+AGG + chr2_1:40334642-40334661 None:intergenic 30.0%
TGCAAATTGTGAAAGAAACA+CGG + chr2_1:40334892-40334911 None:intergenic 30.0%
TTTGCATGACTGATATTTGT+TGG - chr2_1:40334906-40334925 Msa0207700:intron 30.0%
!!! TGGTATTCATTTTGGTTGAT+CGG - chr2_1:40334926-40334945 Msa0207700:intron 30.0%
ATAATCGCTTGGTAAATTCT+AGG + chr2_1:40335027-40335046 None:intergenic 30.0%
TTGGTAGATGAATTCAGTTA+TGG + chr2_1:40335065-40335084 None:intergenic 30.0%
CCATAAATGAATTCAGCTAT+TGG + chr2_1:40335084-40335103 None:intergenic 30.0%
CCAATAGCTGAATTCATTTA+TGG - chr2_1:40335081-40335100 Msa0207700:intron 30.0%
AAATCTTGATTCTTTGAGCA+AGG - chr2_1:40335191-40335210 Msa0207700:intron 30.0%
GCTTGCAGATACAATTTAAT+AGG + chr2_1:40335284-40335303 None:intergenic 30.0%
ATTACAAAACAAGCTTATCC+TGG - chr2_1:40335325-40335344 Msa0207700:intron 30.0%
ATTATCACTTAATCTATGCC+AGG + chr2_1:40335346-40335365 None:intergenic 30.0%
! TAAAGAACAAGGCATTAACA+AGG + chr2_1:40335400-40335419 None:intergenic 30.0%
CAATTCATATGAACAAAGGT+GGG + chr2_1:40335433-40335452 None:intergenic 30.0%
TCAATTCATATGAACAAAGG+TGG + chr2_1:40335434-40335453 None:intergenic 30.0%
! GCCGATTCAAATCATAAATT+CGG + chr2_1:40335525-40335544 None:intergenic 30.0%
TACATGAACTCAATATAGTC+TGG + chr2_1:40335618-40335637 None:intergenic 30.0%
! ATTGAGTTCATGTACTGATA+TGG - chr2_1:40335624-40335643 Msa0207700:intron 30.0%
! TTGAGTTCATGTACTGATAT+GGG - chr2_1:40335625-40335644 Msa0207700:intron 30.0%
!! GAATCTTGTTGATAATTCAC+AGG - chr2_1:40335780-40335799 Msa0207700:intron 30.0%
GATGTTGTCAATCATCAAAA+AGG + chr2_1:40335989-40336008 None:intergenic 30.0%
!! ACAAACTTGTTACCAAACTT+GGG + chr2_1:40336085-40336104 None:intergenic 30.0%
!! AACAAACTTGTTACCAAACT+TGG + chr2_1:40336086-40336105 None:intergenic 30.0%
!!! CATGTTTTTGATTTCCATAC+GGG - chr2_1:40336130-40336149 Msa0207700:intron 30.0%
!!! GCATTTTTTTCGATTTCTCA+AGG + chr2_1:40336299-40336318 None:intergenic 30.0%
!!! AATGCTTCTGATTGTTGTTT+TGG - chr2_1:40336314-40336333 Msa0207700:CDS 30.0%
ATTAATCCTTGCAATATCTG+TGG - chr2_1:40336371-40336390 Msa0207700:CDS 30.0%
!! TCGCTATATGTTTTGTTCTA+GGG + chr2_1:40336414-40336433 None:intergenic 30.0%
TATAGCGACTAATTCCATAT+AGG - chr2_1:40336426-40336445 Msa0207700:CDS 30.0%
TTTAGTTATCAAAAGATGCC+AGG + chr2_1:40336572-40336591 None:intergenic 30.0%
! GTTTGGTTTAATTCATTGTG+TGG - chr2_1:40336603-40336622 Msa0207700:intron 30.0%
AAATATTACGGTGTTCTATC+TGG - chr2_1:40336637-40336656 Msa0207700:intron 30.0%
GAAAACAATGGCAAGAAAAA+GGG + chr2_1:40336955-40336974 None:intergenic 30.0%
ATGCTAAAATGGGAAAACAA+TGG + chr2_1:40336967-40336986 None:intergenic 30.0%
TTAGCATGATATTTGAACCT+TGG - chr2_1:40336980-40336999 Msa0207700:five_prime_UTR 30.0%
TAGCATGATATTTGAACCTT+GGG - chr2_1:40336981-40337000 Msa0207700:five_prime_UTR 30.0%
!!! TTTTAATTTCAGGGAGTTTG+TGG - chr2_1:40337111-40337130 Msa0207700:five_prime_UTR 30.0%
! TTTAATTTCAGGGAGTTTGT+GGG - chr2_1:40337112-40337131 Msa0207700:five_prime_UTR 30.0%
AATCTGAGTAAACAGAAATG+CGG - chr2_1:40337204-40337223 Msa0207700:five_prime_UTR 30.0%
TCTCTTATACTGTGACTAGT+CGG + chr2_1:40330710-40330729 None:intergenic 35.0%
!!! CTCAAAGCTCTGGAAATTTT+GGG + chr2_1:40330925-40330944 None:intergenic 35.0%
! CAAAATTTCCAGAGCTTTGA+GGG - chr2_1:40330924-40330943 Msa0207700:three_prime_UTR 35.0%
ATGATTGATGGAAACGGTAA+CGG + chr2_1:40331000-40331019 None:intergenic 35.0%
CTGTAAAAGAGATCAACAAC+TGG + chr2_1:40331175-40331194 None:intergenic 35.0%
TTTCTTATTAGCGCAAGCAA+AGG - chr2_1:40331217-40331236 Msa0207700:intron 35.0%
! GATTGGATTGGAACATTTGA+AGG - chr2_1:40331485-40331504 Msa0207700:intron 35.0%
ATAGGAAAGTTAGCCCAAAA+AGG - chr2_1:40331860-40331879 Msa0207700:intron 35.0%
GAGTTTATAAATGACCCACA+AGG + chr2_1:40331940-40331959 None:intergenic 35.0%
! AGTTGGCCTAATACTATATG+AGG - chr2_1:40331978-40331997 Msa0207700:CDS 35.0%
! CACTATCTTTTTCCACCATT+TGG - chr2_1:40332029-40332048 Msa0207700:CDS 35.0%
TACTTGATCAATCCAAATGG+TGG + chr2_1:40332044-40332063 None:intergenic 35.0%
GACTCTATGATAAGATGCAT+GGG + chr2_1:40332069-40332088 None:intergenic 35.0%
AGACTCTATGATAAGATGCA+TGG + chr2_1:40332070-40332089 None:intergenic 35.0%
TTATCATAGAGTCTCCATAC+TGG - chr2_1:40332076-40332095 Msa0207700:CDS 35.0%
! ATGTAATGTGATGGAACAGT+AGG + chr2_1:40332191-40332210 None:intergenic 35.0%
! TTTTGGCGTGCATAATTATC+AGG + chr2_1:40332235-40332254 None:intergenic 35.0%
AATTGGAACTTCGATACCTA+TGG + chr2_1:40332340-40332359 None:intergenic 35.0%
ATTCTATGTGTGGTCTAGAT+TGG + chr2_1:40332399-40332418 None:intergenic 35.0%
AGAATCCCGATTTAGTGTAA+TGG - chr2_1:40332414-40332433 Msa0207700:intron 35.0%
GAATCCCGATTTAGTGTAAT+GGG - chr2_1:40332415-40332434 Msa0207700:intron 35.0%
AATCCCGATTTAGTGTAATG+GGG - chr2_1:40332416-40332435 Msa0207700:intron 35.0%
!!! GTGTCACTTACCCTATTTTT+GGG + chr2_1:40332454-40332473 None:intergenic 35.0%
!!! AGTGTCACTTACCCTATTTT+TGG + chr2_1:40332455-40332474 None:intergenic 35.0%
!!! TTTTTTTTTCTAACCTCCCG+CGG - chr2_1:40332486-40332505 Msa0207700:intron 35.0%
!! GGTATTTTCGAGGAAAAAAG+TGG + chr2_1:40332560-40332579 None:intergenic 35.0%
!!! CTAGAATAAGGGTATTTTCG+AGG + chr2_1:40332570-40332589 None:intergenic 35.0%
TTGGTAGGATCTTTCAATCT+TGG - chr2_1:40332627-40332646 Msa0207700:intron 35.0%
TGGATAAGATCATTCGATCT+TGG - chr2_1:40332705-40332724 Msa0207700:intron 35.0%
TCTGTCATAAGATCGAAATG+GGG + chr2_1:40332761-40332780 None:intergenic 35.0%
GATCTGTCATAAGATCGAAA+TGG + chr2_1:40332763-40332782 None:intergenic 35.0%
CAAAAGTCTACACAAACTCA+TGG + chr2_1:40333190-40333209 None:intergenic 35.0%
GACCAAATCATAAGTTCACA+AGG - chr2_1:40333239-40333258 Msa0207700:intron 35.0%
AAACAAAACTGCAGAAACTC+AGG - chr2_1:40333272-40333291 Msa0207700:intron 35.0%
! TTGTAATTTCTGGATGTGTC+CGG + chr2_1:40333416-40333435 None:intergenic 35.0%
ATGTTATGTTACAAGTGGCT+GGG + chr2_1:40333455-40333474 None:intergenic 35.0%
AGCCACTTGTAACATAACAT+GGG - chr2_1:40333455-40333474 Msa0207700:intron 35.0%
AACACTATAATGCTTCTGGA+AGG - chr2_1:40333497-40333516 Msa0207700:intron 35.0%
CTGAGTTCATGATTGTTGAT+AGG + chr2_1:40333561-40333580 None:intergenic 35.0%
GTGTGGTATGCAATTATGTT+TGG + chr2_1:40333669-40333688 None:intergenic 35.0%
GTACAGCATTCAATTAATGG+TGG - chr2_1:40333829-40333848 Msa0207700:intron 35.0%
ACATCAAAAACCTAGACACT+GGG + chr2_1:40333967-40333986 None:intergenic 35.0%
TGAATATGCACTGTAATTCG+TGG + chr2_1:40334180-40334199 None:intergenic 35.0%
!!! TACACTAGCATTTTTTGCAG+TGG - chr2_1:40334573-40334592 Msa0207700:intron 35.0%
ATACTAAAGGACTAATGCAG+GGG + chr2_1:40334629-40334648 None:intergenic 35.0%
GATACTAAAGGACTAATGCA+GGG + chr2_1:40334630-40334649 None:intergenic 35.0%
TGATACTAAAGGACTAATGC+AGG + chr2_1:40334631-40334650 None:intergenic 35.0%
! AAAGTTTGGGATGCATTAAC+AGG - chr2_1:40334795-40334814 Msa0207700:intron 35.0%
GCAAATTGTGAAAGAAACAC+GGG + chr2_1:40334891-40334910 None:intergenic 35.0%
! TTGTACTGTAGTTGTCACTT+TGG - chr2_1:40335143-40335162 Msa0207700:intron 35.0%
! AATGCCTTGTTCTTTATCTG+AGG - chr2_1:40335404-40335423 Msa0207700:intron 35.0%
GTATCCTCAGATAAAGAACA+AGG + chr2_1:40335411-40335430 None:intergenic 35.0%
GATTTATCCACTTCTTTAGG+AGG + chr2_1:40335556-40335575 None:intergenic 35.0%
AACAAGATTCAGTGCAATAG+AGG + chr2_1:40335770-40335789 None:intergenic 35.0%
!! TGTTGATAATTCACAGGCTA+TGG - chr2_1:40335786-40335805 Msa0207700:intron 35.0%
!! GTTGATAATTCACAGGCTAT+GGG - chr2_1:40335787-40335806 Msa0207700:intron 35.0%
!! ATGGTTCTACTGTCAAGTTT+TGG - chr2_1:40335906-40335925 Msa0207700:intron 35.0%
!! TGGTTCTACTGTCAAGTTTT+GGG - chr2_1:40335907-40335926 Msa0207700:intron 35.0%
!!! GTTGGCCATGTTCTTTTTTA+AGG - chr2_1:40335958-40335977 Msa0207700:intron 35.0%
AATCCATAGCTGAAAATCAC+AGG + chr2_1:40336013-40336032 None:intergenic 35.0%
! TGTGATTTTCAGCTATGGAT+TGG - chr2_1:40336012-40336031 Msa0207700:intron 35.0%
!! TTTGGTAACAAGTTTGTTGC+TGG - chr2_1:40336088-40336107 Msa0207700:intron 35.0%
!! TTGGTAACAAGTTTGTTGCT+GGG - chr2_1:40336089-40336108 Msa0207700:intron 35.0%
! TAACTGACTCATGCTTTGTA+GGG + chr2_1:40336268-40336287 None:intergenic 35.0%
!! GTCGCTATATGTTTTGTTCT+AGG + chr2_1:40336415-40336434 None:intergenic 35.0%
AAATAGTTGGTCCAGAACAT+AGG + chr2_1:40336495-40336514 None:intergenic 35.0%
!!! TTTGTTTTACACTTCTGACC+TGG - chr2_1:40336551-40336570 Msa0207700:intron 35.0%
TCTGATTCATCATGAGTCAA+TGG + chr2_1:40336782-40336801 None:intergenic 35.0%
! ATTGACTCATGATGAATCAG+AGG - chr2_1:40336781-40336800 Msa0207700:five_prime_UTR 35.0%
TTGACTCATGATGAATCAGA+GGG - chr2_1:40336782-40336801 Msa0207700:five_prime_UTR 35.0%
GGAAAACAATGGCAAGAAAA+AGG + chr2_1:40336956-40336975 None:intergenic 35.0%
CATATAATGAATTGACGAGC+TGG - chr2_1:40337062-40337081 Msa0207700:five_prime_UTR 35.0%
! TTATACTGTGACTAGTCGGA+CGG + chr2_1:40330706-40330725 None:intergenic 40.0%
TAGTCACAGTATAAGAGAGC+AGG - chr2_1:40330712-40330731 Msa0207700:three_prime_UTR 40.0%
GTATAAGAGAGCAGGTCATA+AGG - chr2_1:40330720-40330739 Msa0207700:three_prime_UTR 40.0%
!!! CCTCAAAGCTCTGGAAATTT+TGG + chr2_1:40330926-40330945 None:intergenic 40.0%
CCAAAATTTCCAGAGCTTTG+AGG - chr2_1:40330923-40330942 Msa0207700:three_prime_UTR 40.0%
TTACGGAAAGTAACACAGGT+GGG + chr2_1:40330972-40330991 None:intergenic 40.0%
! AGTGCTGTTGTTGTTCCTTT+AGG - chr2_1:40331036-40331055 Msa0207700:CDS 40.0%
! GTGCTGTTGTTGTTCCTTTA+GGG - chr2_1:40331037-40331056 Msa0207700:CDS 40.0%
AAGAAACCATCAGGAGTAAC+AGG + chr2_1:40331199-40331218 None:intergenic 40.0%
! GGAACATTTGAAGGGCATAA+AGG - chr2_1:40331494-40331513 Msa0207700:intron 40.0%
! TGCTGTTTGGAGTTGTTGTT+TGG - chr2_1:40331517-40331536 Msa0207700:intron 40.0%
GCACCGCATATCATTTATGA+CGG + chr2_1:40332010-40332029 None:intergenic 40.0%
CTAAATCGGGATTCTATGTG+TGG + chr2_1:40332409-40332428 None:intergenic 40.0%
CAACCCCATTACACTAAATC+GGG + chr2_1:40332422-40332441 None:intergenic 40.0%
CCAACCCCATTACACTAAAT+CGG + chr2_1:40332423-40332442 None:intergenic 40.0%
! CGATTTAGTGTAATGGGGTT+GGG - chr2_1:40332421-40332440 Msa0207700:intron 40.0%
AACAGTCAAAGTCTCGAGAA+GGG + chr2_1:40333041-40333060 None:intergenic 40.0%
TAACAGTCAAAGTCTCGAGA+AGG + chr2_1:40333042-40333061 None:intergenic 40.0%
! ACAGGGTGGTTTGTAATTTC+TGG + chr2_1:40333426-40333445 None:intergenic 40.0%
CATGTTATGTTACAAGTGGC+TGG + chr2_1:40333456-40333475 None:intergenic 40.0%
CAGCCACTTGTAACATAACA+TGG - chr2_1:40333454-40333473 Msa0207700:intron 40.0%
GACCCATGTTATGTTACAAG+TGG + chr2_1:40333460-40333479 None:intergenic 40.0%
AAGTGAAACTTTGCTGCGAT+TGG + chr2_1:40333800-40333819 None:intergenic 40.0%
AGCATTCAATTAATGGTGGC+AGG - chr2_1:40333833-40333852 Msa0207700:intron 40.0%
GCATTCAATTAATGGTGGCA+GGG - chr2_1:40333834-40333853 Msa0207700:intron 40.0%
ATGATGATCTTGGTTAGGGA+TGG - chr2_1:40333871-40333890 Msa0207700:intron 40.0%
TGATGATCTTGGTTAGGGAT+GGG - chr2_1:40333872-40333891 Msa0207700:intron 40.0%
!! GTGTTGACGAATGTTTTCAG+AGG - chr2_1:40333897-40333916 Msa0207700:intron 40.0%
CATCAAAAACCTAGACACTG+GGG + chr2_1:40333966-40333985 None:intergenic 40.0%
GACATCAAAAACCTAGACAC+TGG + chr2_1:40333968-40333987 None:intergenic 40.0%
TAGTTGAGAAGTCATTTGGC+TGG + chr2_1:40334113-40334132 None:intergenic 40.0%
GAATGTAAAAAAGGGCAACC+CGG - chr2_1:40334214-40334233 Msa0207700:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr2_1:40334280-40334299 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr2_1:40334306-40334325 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr2_1:40334304-40334323 Msa0207700:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr2_1:40334311-40334330 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr2_1:40334312-40334331 None:intergenic 40.0%
GTTTGTGTGCAGCAAAGTTT+GGG - chr2_1:40334782-40334801 Msa0207700:intron 40.0%
TCTAGGCATGCACACTTTAA+TGG + chr2_1:40335010-40335029 None:intergenic 40.0%
GTTTGTATATATCTGGGAGC+AGG - chr2_1:40335459-40335478 Msa0207700:intron 40.0%
GGGGATTTATCCACTTCTTT+AGG + chr2_1:40335559-40335578 None:intergenic 40.0%
AAAGAAGTGGATAAATCCCC+TGG - chr2_1:40335559-40335578 Msa0207700:intron 40.0%
! AGTTCATGTACTGATATGGG+AGG - chr2_1:40335628-40335647 Msa0207700:intron 40.0%
GACCATACTATGTTGACAGT+TGG - chr2_1:40335670-40335689 Msa0207700:intron 40.0%
CGCTATATTACAACTGCTGA+TGG - chr2_1:40335887-40335906 Msa0207700:intron 40.0%
! TCACCTGTGATTTTCAGCTA+TGG - chr2_1:40336007-40336026 Msa0207700:intron 40.0%
!! TGGTAACAAGTTTGTTGCTG+GGG - chr2_1:40336090-40336109 Msa0207700:intron 40.0%
GTGAACTTGTGTATGCTACA+CGG + chr2_1:40336228-40336247 None:intergenic 40.0%
! AACTGACTCATGCTTTGTAG+GGG + chr2_1:40336267-40336286 None:intergenic 40.0%
! CTAACTGACTCATGCTTTGT+AGG + chr2_1:40336269-40336288 None:intergenic 40.0%
CATGATCCACAGATATTGCA+AGG + chr2_1:40336380-40336399 None:intergenic 40.0%
TATTCTGATGGTTCCATCCT+CGG + chr2_1:40336747-40336766 None:intergenic 40.0%
AGGATGGAACCATCAGAATA+TGG - chr2_1:40336747-40336766 Msa0207700:CDS 40.0%
TCAGAGGGTTTATCACCAAA+TGG - chr2_1:40336797-40336816 Msa0207700:five_prime_UTR 40.0%
TTTATCACCAAATGGAACCC+TGG - chr2_1:40336805-40336824 Msa0207700:five_prime_UTR 40.0%
! ATTTGCCTTCTCCTTTTCCA+GGG + chr2_1:40336825-40336844 None:intergenic 40.0%
! TGAGGGTTTTCATATTGCAG+AGG - chr2_1:40336871-40336890 Msa0207700:five_prime_UTR 40.0%
ATGAATTGACGAGCTGGTTA+AGG - chr2_1:40337068-40337087 Msa0207700:five_prime_UTR 40.0%
GGTAGAAGTAACACAGAGCT+GGG + chr2_1:40330778-40330797 None:intergenic 45.0%
!! TTTCCAGAGCTTTGAGGGTT+AGG - chr2_1:40330929-40330948 Msa0207700:three_prime_UTR 45.0%
GTTACGGAAAGTAACACAGG+TGG + chr2_1:40330973-40330992 None:intergenic 45.0%
! GGTGTTACGGAAAGTAACAC+AGG + chr2_1:40330976-40330995 None:intergenic 45.0%
! ATTGATGGAAACGGTAACGG+CGG + chr2_1:40330997-40331016 None:intergenic 45.0%
! ACGGTACCTCTTGTTTGTCA+CGG - chr2_1:40331139-40331158 Msa0207700:CDS 45.0%
TACAGTCCTGTTACTCCTGA+TGG - chr2_1:40331190-40331209 Msa0207700:CDS 45.0%
TAGATGCTAGTCCTATGCTG+AGG - chr2_1:40331447-40331466 Msa0207700:intron 45.0%
!! AAGGGCATAAAGGTGCTGTT+TGG - chr2_1:40331504-40331523 Msa0207700:intron 45.0%
GCACGTGTTGGATGTTTATC+CGG + chr2_1:40331799-40331818 None:intergenic 45.0%
ATGAATGCAAGTGCACGTGT+TGG + chr2_1:40331811-40331830 None:intergenic 45.0%
! ATGTGATGGAACAGTAGGCT+AGG + chr2_1:40332186-40332205 None:intergenic 45.0%
GGCGTGCATAATTATCAGGT+TGG + chr2_1:40332231-40332250 None:intergenic 45.0%
! CCGATTTAGTGTAATGGGGT+TGG - chr2_1:40332420-40332439 Msa0207700:intron 45.0%
GAAAAAAGTGGACGTGGTTG+GGG + chr2_1:40332548-40332567 None:intergenic 45.0%
GGAAAAAAGTGGACGTGGTT+GGG + chr2_1:40332549-40332568 None:intergenic 45.0%
AGGAAAAAAGTGGACGTGGT+TGG + chr2_1:40332550-40332569 None:intergenic 45.0%
TTCGAGGAAAAAAGTGGACG+TGG + chr2_1:40332554-40332573 None:intergenic 45.0%
TTGGGCACTACATCTCTTCA+TGG + chr2_1:40333650-40333669 None:intergenic 45.0%
CACCTTCCAGAAGCAATGTT+GGG + chr2_1:40333728-40333747 None:intergenic 45.0%
ATTGACAGAAGAAAGGGACC+AGG - chr2_1:40333765-40333784 Msa0207700:intron 45.0%
CATTTGGCTGGAATCACTGT+GGG + chr2_1:40334101-40334120 None:intergenic 45.0%
TCATTTGGCTGGAATCACTG+TGG + chr2_1:40334102-40334121 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG + chr2_1:40334281-40334300 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr2_1:40334284-40334303 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr2_1:40334315-40334334 Msa0207700:intron 45.0%
GGTTTGTGTGCAGCAAAGTT+TGG - chr2_1:40334781-40334800 Msa0207700:intron 45.0%
!!! CAGAGCATGTGCTTTTTCTG+AGG - chr2_1:40334854-40334873 Msa0207700:intron 45.0%
TTGAGCAAGGACTGAGTGTA+TGG - chr2_1:40335204-40335223 Msa0207700:intron 45.0%
TGAGCAAGGACTGAGTGTAT+GGG - chr2_1:40335205-40335224 Msa0207700:intron 45.0%
! ATACCCACCTTTTGCTCACT+GGG - chr2_1:40335482-40335501 Msa0207700:intron 45.0%
! ACTTCTTTAGGAGGTGCATC+AGG + chr2_1:40335547-40335566 None:intergenic 45.0%
TGATGCACCTCCTAAAGAAG+TGG - chr2_1:40335546-40335565 Msa0207700:intron 45.0%
ATAAATCCCCTGGTTCAGTC+AGG - chr2_1:40335569-40335588 Msa0207700:intron 45.0%
GGCCAACTGTCAACATAGTA+TGG + chr2_1:40335675-40335694 None:intergenic 45.0%
AGGCTATGGGATGTAAGAAC+TGG - chr2_1:40335800-40335819 Msa0207700:intron 45.0%
CTCACTTCAGCACTAGTCAT+AGG + chr2_1:40335857-40335876 None:intergenic 45.0%
CTATGACATGCCTTGCAATG+TGG - chr2_1:40336042-40336061 Msa0207700:intron 45.0%
! GAAGCTGATTCCACATTGCA+AGG + chr2_1:40336055-40336074 None:intergenic 45.0%
!! GGTAACAAGTTTGTTGCTGG+GGG - chr2_1:40336091-40336110 Msa0207700:intron 45.0%
TTCCATACGGGTGATGAGAT+TGG - chr2_1:40336142-40336161 Msa0207700:intron 45.0%
TACCAATCTCATCACCCGTA+TGG + chr2_1:40336147-40336166 None:intergenic 45.0%
TAGGGGGGAAAAGTTGAAAC+TGG + chr2_1:40336250-40336269 None:intergenic 45.0%
! ACTGACTCATGCTTTGTAGG+GGG + chr2_1:40336266-40336285 None:intergenic 45.0%
TACGGTGTTCTATCTGGTGA+TGG - chr2_1:40336643-40336662 Msa0207700:intron 45.0%
GCATGCAACAAAGGACATCA+TGG - chr2_1:40336668-40336687 Msa0207700:CDS 45.0%
ACCATCAGAATATGGCAGAC+AGG - chr2_1:40336755-40336774 Msa0207700:CDS 45.0%
CCATCAGAATATGGCAGACA+GGG - chr2_1:40336756-40336775 Msa0207700:CDS 45.0%
ACCAAATGGAACCCTGGAAA+AGG - chr2_1:40336811-40336830 Msa0207700:five_prime_UTR 45.0%
! TCCTTTTCCAGGGTTCCATT+TGG + chr2_1:40336815-40336834 None:intergenic 45.0%
! CATTTGCCTTCTCCTTTTCC+AGG + chr2_1:40336826-40336845 None:intergenic 45.0%
AAAGGAGAAGGCAAATGCAG+AGG - chr2_1:40336829-40336848 Msa0207700:five_prime_UTR 45.0%
! GGGTTTTCATATTGCAGAGG+AGG - chr2_1:40336874-40336893 Msa0207700:five_prime_UTR 45.0%
CTCTTCCTTTCCTTTGGACT+TGG + chr2_1:40336900-40336919 None:intergenic 45.0%
CAAGTCCAAAGGAAAGGAAG+AGG - chr2_1:40336898-40336917 Msa0207700:five_prime_UTR 45.0%
CATGTATATTAGAGGGCCCA+AGG + chr2_1:40337000-40337019 None:intergenic 45.0%
TCAGCGAGATATTCTCTGCA+GGG + chr2_1:40337236-40337255 None:intergenic 45.0%
TGCAGAGAATATCTCGCTGA+GGG - chr2_1:40337236-40337255 Msa0207700:five_prime_UTR 45.0%
AGAATATCTCGCTGAGGGTA+GGG - chr2_1:40337241-40337260 Msa0207700:five_prime_UTR 45.0%
!! AAAAAATAAAAAAAAAAAGA+GGG + chr2_1:40330840-40330859 None:intergenic 5.0%
!! AAAAAAATAAAAAAAAAAAG+AGG + chr2_1:40330841-40330860 None:intergenic 5.0%
AAGTAACACAGAGCTGGGAG+AGG + chr2_1:40330773-40330792 None:intergenic 50.0%
GGGTAGAAGTAACACAGAGC+TGG + chr2_1:40330779-40330798 None:intergenic 50.0%
! AAACGGTAACGGCGGTGTTA+CGG + chr2_1:40330989-40331008 None:intergenic 50.0%
GAGTGACCGTGACAAACAAG+AGG + chr2_1:40331148-40331167 None:intergenic 50.0%
GCTAGTCCTATGCTGAGGAA+TGG - chr2_1:40331452-40331471 Msa0207700:intron 50.0%
GTCTCTCCATTCCTCAGCAT+AGG + chr2_1:40331461-40331480 None:intergenic 50.0%
ATGCTGAGGAATGGAGAGAC+TGG - chr2_1:40331461-40331480 Msa0207700:intron 50.0%
GGAATGGAGAGACTGGAGAT+TGG - chr2_1:40331468-40331487 Msa0207700:intron 50.0%
GGAGAGACTGGAGATTGGAT+TGG - chr2_1:40331473-40331492 Msa0207700:intron 50.0%
TGAGGAAGTGGGATCCAGTA+TGG + chr2_1:40332093-40332112 None:intergenic 50.0%
CAAGCGCATGATGAGGAAGT+GGG + chr2_1:40332104-40332123 None:intergenic 50.0%
AGCAAAGCAAGCGCATGATG+AGG + chr2_1:40332111-40332130 None:intergenic 50.0%
CATGCGCTTGCTTTGCTCAT+TGG - chr2_1:40332114-40332133 Msa0207700:intron 50.0%
!!! TGGGGAAAGGGGGGTATTTT+TGG + chr2_1:40332530-40332549 None:intergenic 50.0%
TGTTACAAGTGGCTGGGTGT+GGG + chr2_1:40333449-40333468 None:intergenic 50.0%
ATGTTACAAGTGGCTGGGTG+TGG + chr2_1:40333450-40333469 None:intergenic 50.0%
CCAGAAGCAATGTTGGGTGT+GGG + chr2_1:40333722-40333741 None:intergenic 50.0%
TCCAGAAGCAATGTTGGGTG+TGG + chr2_1:40333723-40333742 None:intergenic 50.0%
CACCCAACATTGCTTCTGGA+AGG - chr2_1:40333723-40333742 Msa0207700:intron 50.0%
CCACCTTCCAGAAGCAATGT+TGG + chr2_1:40333729-40333748 None:intergenic 50.0%
! CCAACATTGCTTCTGGAAGG+TGG - chr2_1:40333726-40333745 Msa0207700:intron 50.0%
! GTTTTCAGAGGCGAGTAGTG+AGG - chr2_1:40333909-40333928 Msa0207700:intron 50.0%
TGGGGTCACAATCACTGTTG+TGG + chr2_1:40333948-40333967 None:intergenic 50.0%
TGATTGTGACCCCAGTGTCT+AGG - chr2_1:40333954-40333973 Msa0207700:intron 50.0%
TGCATCAAATACACCCGGTG+TGG + chr2_1:40334005-40334024 None:intergenic 50.0%
CACTCGTGAAGTTCAAGTCC+TGG + chr2_1:40334336-40334355 None:intergenic 50.0%
CGGCAGAATGCAATGTGTAG+CGG + chr2_1:40334599-40334618 None:intergenic 50.0%
! GATACCCACCTTTTGCTCAC+TGG - chr2_1:40335481-40335500 Msa0207700:intron 50.0%
! TACCCACCTTTTGCTCACTG+GGG - chr2_1:40335483-40335502 Msa0207700:intron 50.0%
AACACTCCTGACTGAACCAG+GGG + chr2_1:40335578-40335597 None:intergenic 50.0%
CAACACTCCTGACTGAACCA+GGG + chr2_1:40335579-40335598 None:intergenic 50.0%
!! GTTCAGTCAGGAGTGTTGCA+TGG - chr2_1:40335581-40335600 Msa0207700:intron 50.0%
AGCACTAGTCATAGGCGACT+TGG + chr2_1:40335849-40335868 None:intergenic 50.0%
! GACTAGTGCTGAAGTGAGTC+AGG - chr2_1:40335859-40335878 Msa0207700:intron 50.0%
! AGTGCTGAAGTGAGTCAGGA+TGG - chr2_1:40335863-40335882 Msa0207700:intron 50.0%
GCTTCGTTAGAGCCCAAGTT+TGG - chr2_1:40336070-40336089 Msa0207700:intron 50.0%
CTGACTCATGCTTTGTAGGG+GGG + chr2_1:40336265-40336284 None:intergenic 50.0%
GTGATGGCAGCATGCAACAA+AGG - chr2_1:40336659-40336678 Msa0207700:intron 50.0%
ATGGTCCTGTACACTGTGTC+CGG - chr2_1:40336687-40336706 Msa0207700:CDS 50.0%
ATTCTCCTCCAGGAGAGAAC+CGG + chr2_1:40336709-40336728 None:intergenic 50.0%
GATGCATACGATTCTCCTCC+AGG + chr2_1:40336719-40336738 None:intergenic 50.0%
GGAGGAGAATCGTATGCATC+AGG - chr2_1:40336719-40336738 Msa0207700:CDS 50.0%
ATCGTATGCATCAGGATCCG+AGG - chr2_1:40336727-40336746 Msa0207700:CDS 50.0%
TATGCATCAGGATCCGAGGA+TGG - chr2_1:40336731-40336750 Msa0207700:CDS 50.0%
CCCTGTCTGCCATATTCTGA+TGG + chr2_1:40336759-40336778 None:intergenic 50.0%
TGGAACCCTGGAAAAGGAGA+AGG - chr2_1:40336817-40336836 Msa0207700:five_prime_UTR 50.0%
GTCCAAAGGAAAGGAAGAGG+CGG - chr2_1:40336901-40336920 Msa0207700:five_prime_UTR 50.0%
TCCAAAGGAAAGGAAGAGGC+GGG - chr2_1:40336902-40336921 Msa0207700:five_prime_UTR 50.0%
TCAGGGAGTTTGTGGGATAC+TGG - chr2_1:40337119-40337138 Msa0207700:five_prime_UTR 50.0%
CTCAGCGAGATATTCTCTGC+AGG + chr2_1:40337237-40337256 None:intergenic 50.0%
CTGCAGAGAATATCTCGCTG+AGG - chr2_1:40337235-40337254 Msa0207700:five_prime_UTR 50.0%
GAGAATATCTCGCTGAGGGT+AGG - chr2_1:40337240-40337259 Msa0207700:five_prime_UTR 50.0%
GTCCAGAACGACAGCGTAAG+AGG - chr2_1:40330661-40330680 Msa0207700:three_prime_UTR 55.0%
CTCCTCTTACGCTGTCGTTC+TGG + chr2_1:40330666-40330685 None:intergenic 55.0%
ACACAGAGCTGGGAGAGGAA+GGG + chr2_1:40330768-40330787 None:intergenic 55.0%
AACACAGAGCTGGGAGAGGA+AGG + chr2_1:40330769-40330788 None:intergenic 55.0%
CCTCCTAACCCTCAAAGCTC+TGG + chr2_1:40330935-40330954 None:intergenic 55.0%
!! CCAGAGCTTTGAGGGTTAGG+AGG - chr2_1:40330932-40330951 Msa0207700:three_prime_UTR 55.0%
GCAAGCGCATGATGAGGAAG+TGG + chr2_1:40332105-40332124 None:intergenic 55.0%
ACTGTGTCCCTTCCTCCTAG+TGG - chr2_1:40332160-40332179 Msa0207700:intron 55.0%
GAACAGTAGGCTAGGCCACT+AGG + chr2_1:40332178-40332197 None:intergenic 55.0%
AGTGGACGTGGTTGGGGAAA+GGG + chr2_1:40332542-40332561 None:intergenic 55.0%
AAGTGGACGTGGTTGGGGAA+AGG + chr2_1:40332543-40332562 None:intergenic 55.0%
CCCACACCCAACATTGCTTC+TGG - chr2_1:40333719-40333738 Msa0207700:intron 55.0%
ACAGAAGAAAGGGACCAGGC+TGG - chr2_1:40333769-40333788 Msa0207700:intron 55.0%
! TGCGATTGGTTGTTCCAGCC+TGG + chr2_1:40333786-40333805 None:intergenic 55.0%
TCCACGCATAGTGACCACAC+CGG - chr2_1:40333988-40334007 Msa0207700:intron 55.0%
GGCTGGAATCACTGTGGGAT+TGG + chr2_1:40334096-40334115 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr2_1:40334240-40334259 Msa0207700:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr2_1:40334241-40334260 Msa0207700:intron 55.0%
! ACCCACCTTTTGCTCACTGG+GGG - chr2_1:40335484-40335503 Msa0207700:intron 55.0%
TCCCCCAGTGAGCAAAAGGT+GGG + chr2_1:40335488-40335507 None:intergenic 55.0%
GCAACACTCCTGACTGAACC+AGG + chr2_1:40335580-40335599 None:intergenic 55.0%
!! GTACTGATATGGGAGGCGTC+AGG - chr2_1:40335635-40335654 Msa0207700:intron 55.0%
!! GCGACTTGGTGTCAAGTGTC+TGG + chr2_1:40335835-40335854 None:intergenic 55.0%
TTGCTGGGGGAGAAGACTTG+TGG - chr2_1:40336104-40336123 Msa0207700:intron 55.0%
TGCTGGGGGAGAAGACTTGT+GGG - chr2_1:40336105-40336124 Msa0207700:intron 55.0%
GAGAACCGGACACAGTGTAC+AGG + chr2_1:40336695-40336714 None:intergenic 55.0%
GGAGAAGGCAAATGCAGAGG+AGG - chr2_1:40336832-40336851 Msa0207700:five_prime_UTR 55.0%
GAAGGCAAATGCAGAGGAGG+AGG - chr2_1:40336835-40336854 Msa0207700:five_prime_UTR 55.0%
GAGGTTTCGCGCAGGATTGA+GGG - chr2_1:40336854-40336873 Msa0207700:five_prime_UTR 55.0%
GGAGGCCAAGTCCAAAGGAA+AGG - chr2_1:40336892-40336911 Msa0207700:five_prime_UTR 55.0%
CCAAAGGAAAGGAAGAGGCG+GGG - chr2_1:40336903-40336922 Msa0207700:five_prime_UTR 55.0%
CAAAGGAAAGGAAGAGGCGG+GGG - chr2_1:40336904-40336923 Msa0207700:five_prime_UTR 55.0%
ATATCTCGCTGAGGGTAGGG+TGG - chr2_1:40337244-40337263 Msa0207700:five_prime_UTR 55.0%
TATCTCGCTGAGGGTAGGGT+GGG - chr2_1:40337245-40337264 Msa0207700:five_prime_UTR 55.0%
! GACTAGTCGGACGGACGAGA+TGG + chr2_1:40330697-40330716 None:intergenic 60.0%
GGCTAGGCCACTAGGAGGAA+GGG + chr2_1:40332170-40332189 None:intergenic 60.0%
AGGCTAGGCCACTAGGAGGA+AGG + chr2_1:40332171-40332190 None:intergenic 60.0%
CAGTAGGCTAGGCCACTAGG+AGG + chr2_1:40332175-40332194 None:intergenic 60.0%
! GTGTAATGGGGTTGGGCGCT+CGG - chr2_1:40332428-40332447 Msa0207700:intron 60.0%
TGGGCGCTCGGCCCAAAAAT+AGG - chr2_1:40332440-40332459 Msa0207700:intron 60.0%
GGGCGCTCGGCCCAAAAATA+GGG - chr2_1:40332441-40332460 Msa0207700:intron 60.0%
TGGACGTGGTTGGGGAAAGG+GGG + chr2_1:40332540-40332559 None:intergenic 60.0%
GTGGACGTGGTTGGGGAAAG+GGG + chr2_1:40332541-40332560 None:intergenic 60.0%
AAGTGGCTGGGTGTGGGACA+GGG + chr2_1:40333443-40333462 None:intergenic 60.0%
CCACGCATAGTGACCACACC+GGG - chr2_1:40333989-40334008 Msa0207700:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr2_1:40334236-40334255 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr2_1:40334252-40334271 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr2_1:40334253-40334272 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr2_1:40334252-40334271 Msa0207700:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr2_1:40334253-40334272 Msa0207700:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr2_1:40334268-40334287 None:intergenic 60.0%
CTCCCCCAGTGAGCAAAAGG+TGG + chr2_1:40335489-40335508 None:intergenic 60.0%
CTGCTCCCCCAGTGAGCAAA+AGG + chr2_1:40335492-40335511 None:intergenic 60.0%
CACTGTGTCCGGTTCTCTCC+TGG - chr2_1:40336698-40336717 Msa0207700:CDS 60.0%
TGTGTCCGGTTCTCTCCTGG+AGG - chr2_1:40336701-40336720 Msa0207700:CDS 60.0%
GGAGGTTTCGCGCAGGATTG+AGG - chr2_1:40336853-40336872 Msa0207700:five_prime_UTR 60.0%
GCAGAGGAGGCCAAGTCCAA+AGG - chr2_1:40336887-40336906 Msa0207700:five_prime_UTR 60.0%
CCCCGCCTCTTCCTTTCCTT+TGG + chr2_1:40336906-40336925 None:intergenic 60.0%
GCAAACCAATCCCTGCGCCC+TGG - chr2_1:40330742-40330761 Msa0207700:three_prime_UTR 65.0%
AGCTGGGAGAGGAAGGGCCA+GGG + chr2_1:40330762-40330781 None:intergenic 65.0%
CAAAAAGAGCGGCGAGCCGC+GGG + chr2_1:40332505-40332524 None:intergenic 65.0%
GCAAAAAGAGCGGCGAGCCG+CGG + chr2_1:40332506-40332525 None:intergenic 65.0%
GGACGTGGTTGGGGAAAGGG+GGG + chr2_1:40332539-40332558 None:intergenic 65.0%
CAAGTGGCTGGGTGTGGGAC+AGG + chr2_1:40333444-40333463 None:intergenic 65.0%
CCCGGTGTGGTCACTATGCG+TGG + chr2_1:40333992-40334011 None:intergenic 65.0%
CAAGGATCACAGCGCAGCCG+TGG - chr2_1:40334039-40334058 Msa0207700:intron 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr2_1:40334235-40334254 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr2_1:40334246-40334265 Msa0207700:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr2_1:40334247-40334266 Msa0207700:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr2_1:40334251-40334270 Msa0207700:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr2_1:40334266-40334285 Msa0207700:intron 65.0%
CAGAGGAGGAGGTTTCGCGC+AGG - chr2_1:40336846-40336865 Msa0207700:five_prime_UTR 65.0%
AGGAAAGGAAGAGGCGGGGG+TGG - chr2_1:40336907-40336926 Msa0207700:five_prime_UTR 65.0%
AAGGGCCAGGGCGCAGGGAT+TGG + chr2_1:40330750-40330769 None:intergenic 70.0%
AGAGGAAGGGCCAGGGCGCA+GGG + chr2_1:40330755-40330774 None:intergenic 70.0%
GAGCTGGGAGAGGAAGGGCC+AGG + chr2_1:40330763-40330782 None:intergenic 70.0%
TGGCTGGGTGTGGGACAGGG+TGG + chr2_1:40333440-40333459 None:intergenic 70.0%
GGATCACAGCGCAGCCGTGG+TGG - chr2_1:40334042-40334061 Msa0207700:intron 70.0%
GAGAGGAAGGGCCAGGGCGC+AGG + chr2_1:40330756-40330775 None:intergenic 75.0%
AAAGAGCGGCGAGCCGCGGG+AGG + chr2_1:40332502-40332521 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 40330626 40337273 40330626 ID=Msa0207700;Name=Msa0207700
chr2_1 mRNA 40330626 40337273 40330626 ID=Msa0207700-mRNA-1;Parent=Msa0207700;Name=Msa0207700-mRNA-1;_AED=0.05;_eAED=0.05;_QI=495|1|1|1|1|1|7|336|352
chr2_1 exon 40330626 40331230 40330626 ID=Msa0207700-mRNA-1:exon:12490;Parent=Msa0207700-mRNA-1
chr2_1 exon 40331736 40331875 40331736 ID=Msa0207700-mRNA-1:exon:12489;Parent=Msa0207700-mRNA-1
chr2_1 exon 40331960 40332097 40331960 ID=Msa0207700-mRNA-1:exon:12488;Parent=Msa0207700-mRNA-1
chr2_1 exon 40332243 40332418 40332243 ID=Msa0207700-mRNA-1:exon:12487;Parent=Msa0207700-mRNA-1
chr2_1 exon 40333024 40333105 40333024 ID=Msa0207700-mRNA-1:exon:12486;Parent=Msa0207700-mRNA-1
chr2_1 exon 40336314 40336449 40336314 ID=Msa0207700-mRNA-1:exon:12485;Parent=Msa0207700-mRNA-1
chr2_1 exon 40336661 40337273 40336661 ID=Msa0207700-mRNA-1:exon:12484;Parent=Msa0207700-mRNA-1
chr2_1 five_prime_UTR 40336779 40337273 40336779 ID=Msa0207700-mRNA-1:five_prime_utr;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40336661 40336778 40336661 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40336314 40336449 40336314 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40333024 40333105 40333024 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40332243 40332418 40332243 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40331960 40332097 40331960 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40331736 40331875 40331736 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 CDS 40330962 40331230 40330962 ID=Msa0207700-mRNA-1:cds;Parent=Msa0207700-mRNA-1
chr2_1 three_prime_UTR 40330626 40330961 40330626 ID=Msa0207700-mRNA-1:three_prime_utr;Parent=Msa0207700-mRNA-1
Gene Sequence

>Msa0207700

ATGGAAAAGAAAAAAGTTACGGTACCTCTTGTTTGTCACGGTCACTCTCGTCCAGTTGTTGATCTCTTTTACAGTCCTGTTACTCCTGATGGTTTCTTTCTTATTAGCGCAAGCAAAGATGCTAGTCCTATGCTGAGGAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCATAAAGGTGCTGTTTGGAGTTGTTGTTTGGATGCTAATGCTTTGCGCGCTGCTACTGCTTCTGCTGATTTCTCAACCAAAGTTTGGGATGCATTAACAGGTGACGCGTTACATTCTTTTGAGCATAAGCACATTGTCAGAGCATGTGCTTTTTCTGAGGATACCCACCTTTTGCTCACTGGGGGAGCAGAGAAAATTCTCCGAATTTATGATTTGAATCGGCCTGATGCACCTCCTAAAGAAGTGGATAAATCCCCTGGTTCAGTCAGGAGTGTTGCATGGCTTCATAGTGACCAGACTATATTGAGTTCATGTACTGATATGGGAGGCGTCAGGCTATGGGATGTAAGAACTGGTAAAATTGTCCAGACACTTGACACCAAGTCGCCTATGACTAGTGCTGAAGTGAGTCAGGATGGTCGCTATATTACAACTGCTGATGGTTCTACTGTCAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCTATGACATGCCTTGCAATGTGGAATCAGCTTCGTTAGAGCCCAAGTTTGGTAACAAGTTTGTTGCTGGGGGAGAAGACTTGTGGGTTCATGTTTTTGATTTCCATACGGGTGATGAGATTGCATGCAACAAAGGACATCATGGTCCTGTACACTGTGTCCGGTTCTCTCCTGGAGGAGAATCGTATGCATCAGGATCCGAGGATGGAACCATCAGAATATGGCAGACAGGGCCATTGACTCATGATGAATCAGAGGGTTTATCACCAAATGGAACCCTGGAAAAGGAGAAGGCAAATGCAGAGGAGGAGGTTTCGCGCAGGATTGAGGGTTTTCATATTGCAGAGGAGGCCAAGTCCAAAGGAAAGGAAGAGGCGGGGGTGGAATTATGA
Protein sequence

>Msa0207700

MEKKKVTVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADFSTKVWDALTGDALHSFEHKHIVRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEVDKSPGSVRSVAWLHSDQTILSSCTDMGGVRLWDVRTGKIVQTLDTKSPMTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTHDESEGLSPNGTLEKEKANAEEEVSRRIEGFHIAEEAKSKGKEEAGVEL*