AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167010 MtrunA17_Chr7g0266861 97.768 672 11 1 13 684 1 668 0.0 1343
Msa1167010 MtrunA17_Chr4g0026051 43.646 543 252 19 19 548 22 523 1.68e-107 339
Msa1167010 MtrunA17_Chr2g0321731 39.874 637 297 27 19 620 14 599 1.06e-98 317
Msa1167010 MtrunA17_Chr5g0397031 34.300 414 248 8 45 454 20 413 1.59e-55 201
Msa1167010 MtrunA17_Chr8g0347871 27.924 419 239 10 42 453 18 380 2.30e-36 144
Msa1167010 MtrunA17_Chr3g0098801 37.624 202 119 1 263 457 222 423 1.13e-33 137
Msa1167010 MtrunA17_Chr5g0444041 39.175 194 118 0 260 453 208 401 3.50e-32 132
Msa1167010 MtrunA17_Chr7g0275251 32.569 218 143 2 240 453 134 351 2.60e-24 107
Msa1167010 MtrunA17_Chr2g0288331 39.267 191 116 0 263 453 164 354 5.05e-24 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167010 AT3G11590.1 57.496 647 210 23 1 631 1 598 0.0 594
Msa1167010 AT3G11590.2 59.322 472 151 15 165 631 1 436 1.53e-154 455
Msa1167010 AT5G22310.1 35.182 523 222 19 20 537 9 419 2.62e-54 194
Msa1167010 AT1G50660.1 32.573 307 177 4 237 520 212 511 8.46e-37 147
Msa1167010 AT5G41620.1 27.846 492 296 10 99 571 46 497 3.67e-35 142
Msa1167010 AT5G41620.4 29.082 392 241 6 182 571 24 380 8.87e-34 136
Msa1167010 AT5G41620.3 29.082 392 241 6 182 571 24 380 8.87e-34 136
Msa1167010 AT3G20350.1 37.629 194 121 0 260 453 211 404 1.21e-33 137
Msa1167010 AT5G41620.2 29.752 363 222 5 211 571 7 338 4.82e-32 130
Msa1167010 AT1G64180.1 29.086 361 182 9 44 389 31 332 7.16e-28 119
Msa1167010 AT2G46250.1 26.076 395 205 9 42 427 13 329 2.37e-22 101
Msa1167010 AT2G46250.2 34.615 208 116 4 220 427 51 238 6.35e-20 92.8

Find 179 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTCTTGGAAGCTATTTA+TGG 0.131870 7_4:-59180958 None:intergenic
GCGCTATTCTTGTAGGTAAA+AGG 0.213564 7_4:+59178016 Msa1167010:CDS
CTATTCCATCTCCTGAGTTT+TGG 0.222833 7_4:-59180749 None:intergenic
TAAATCAGTGAAAGGATTAA+AGG 0.286783 7_4:+59180845 Msa1167010:CDS
CAGTATGCAGAGCTGATATA+AGG 0.298646 7_4:-59179804 None:intergenic
CTTTGTGTTGATGAATTAAT+TGG 0.308636 7_4:-59177839 None:intergenic
AGTGATTACGTGGCGGAATA+TGG 0.325222 7_4:-59177760 None:intergenic
AAGAAGTTAAAACAAAAGAT+AGG 0.326485 7_4:+59178271 Msa1167010:CDS
ATCAAATACTAGCTGGTTCC+AGG 0.332122 7_4:+59180868 Msa1167010:CDS
ATTTAATAAGGAAGTCTAAA+AGG 0.333697 7_4:+59181045 Msa1167010:CDS
AAATGGAGAAAAGCTTCTTT+TGG 0.335316 7_4:-59181131 None:intergenic
ACTGCTAGGTCTATTCGTTC+TGG 0.342193 7_4:+59178300 Msa1167010:CDS
CTCTCTTGGAAGCTATTTAT+GGG 0.346422 7_4:-59180957 None:intergenic
CCAATCGAGGAAGAAATAAA+AGG 0.350026 7_4:+59180627 Msa1167010:CDS
CTTCTTTATCTTCAGTATGA+TGG 0.351025 7_4:-59180458 None:intergenic
TTGCCGAAGAAAAGGCTTCT+TGG 0.356338 7_4:+59179914 Msa1167010:CDS
GTGAGGCTCATAATTTAATA+AGG 0.357238 7_4:+59181033 Msa1167010:CDS
ACATCACCATGTTGGTCCTT+TGG 0.357896 7_4:+59178739 Msa1167010:CDS
TTCAAACGCGCTATTCTTGT+AGG 0.362288 7_4:+59178009 Msa1167010:CDS
CGCTATTCTTGTAGGTAAAA+GGG 0.369576 7_4:+59178017 Msa1167010:CDS
CTCAACAATTTCTCGCTCCT+TGG 0.369601 7_4:-59179941 None:intergenic
TATATCAGATGGAGTGGAAT+GGG 0.374464 7_4:+59180704 Msa1167010:CDS
GCATTCTATAGAGTTAAATA+TGG 0.379581 7_4:+59180539 Msa1167010:CDS
CCACCGCCGCCGTCGCAATC+GGG 0.394444 7_4:+59178132 Msa1167010:CDS
CCCGATTGCGACGGCGGCGG+TGG 0.395971 7_4:-59178132 None:intergenic
TCCACCGCCGCCGTCGCAAT+CGG 0.402160 7_4:+59178131 Msa1167010:CDS
TTGACCAATATGAGTAAGTA+TGG 0.406666 7_4:+59181209 Msa1167010:three_prime_UTR
GCATTGTAGCATGTCTCTCT+TGG 0.406927 7_4:-59180971 None:intergenic
GAAAACTAGCGGCGACGCTT+TGG 0.407948 7_4:+59178187 Msa1167010:CDS
ATACTAGCTGGTTCCAGGCT+TGG 0.420308 7_4:+59180873 Msa1167010:CDS
GATTCCTTCGCCTAGTGTTA+AGG 0.423275 7_4:+59178221 Msa1167010:CDS
TGGTTGGATGAAATGGAGTT+GGG 0.423678 7_4:-59177736 None:intergenic
AGGGGTCTGTGCTCGAGATC+TGG 0.425971 7_4:-59179653 None:intergenic
TCTCTCCTCGCGTAACATAT+CGG 0.429027 7_4:-59180253 None:intergenic
ACAATGGACATGATGATTCC+TGG 0.430441 7_4:+59177916 Msa1167010:CDS
AAGACCATACTTACTCATAT+TGG 0.436799 7_4:-59181213 None:intergenic
GGTTGTGAAAATTGTCTAGT+TGG 0.437193 7_4:-59180918 None:intergenic
AATCAAGGTTAGGGGAAGCC+AGG 0.438109 7_4:+59181009 Msa1167010:CDS
ATATGGATGGTTGGATGAAA+TGG 0.441919 7_4:-59177743 None:intergenic
GCTGGAGAGGGCTCGCCTAC+AGG 0.447781 7_4:+59179828 Msa1167010:CDS
AGAATGGATCGATCTGGAAT+TGG 0.448538 7_4:+59178662 Msa1167010:CDS
TCTCCTTTGTTTATCTATCT+CGG 0.449144 7_4:-59180175 None:intergenic
AGAATGCAGGTCACTTTCAC+CGG 0.449342 7_4:-59180523 None:intergenic
CAGCAAACAAGTAAGAGAAA+AGG 0.450636 7_4:+59180368 Msa1167010:CDS
ACATGTGTTATAAGTATAAC+CGG 0.451059 7_4:+59181252 Msa1167010:three_prime_UTR
AGCAAACAAGTAAGAGAAAA+GGG 0.451711 7_4:+59180369 Msa1167010:CDS
TTCTTTATCTTCAGTATGAT+GGG 0.453148 7_4:-59180457 None:intergenic
TCTGATCTGAACGTTGTTCG+TGG 0.462528 7_4:-59179864 None:intergenic
GCTGCAATTGAATCTGTTGC+AGG 0.462769 7_4:+59179964 Msa1167010:CDS
CCTAGCAAGGGGTATTTGCT+TGG 0.468336 7_4:-59181103 None:intergenic
AAAGCTTGAACAAGAAGCTT+GGG 0.470601 7_4:+59180025 Msa1167010:CDS
GACGAAAGCATCCCTTCTTA+AGG 0.477775 7_4:+59180062 Msa1167010:CDS
CATGCTACAATGCAGGGAAA+TGG 0.478843 7_4:+59180981 Msa1167010:CDS
ATCAAAGCAAGCTCCGGTAT+CGG 0.481784 7_4:+59178161 Msa1167010:CDS
GTTCTTTCACCACCTTAAGA+AGG 0.483351 7_4:-59180074 None:intergenic
AACAAAATCAACTACAACAA+TGG 0.486287 7_4:+59177900 Msa1167010:CDS
CAAGAAGCTTGGGAGAGAAC+TGG 0.488096 7_4:+59180035 Msa1167010:CDS
CTATCTCTGGAAGAGCTTCA+AGG 0.490263 7_4:+59180658 Msa1167010:CDS
AGTATGCAGAGCTGATATAA+GGG 0.490595 7_4:-59179803 None:intergenic
TGATGATTCCTGGTAAAATA+CGG 0.490936 7_4:+59177926 Msa1167010:CDS
GGGTATTTGCTTGGCAAACA+AGG 0.495675 7_4:-59181094 None:intergenic
AGAAGTTAAAACAAAAGATA+GGG 0.496175 7_4:+59178272 Msa1167010:CDS
TTGTAGAGAATGGATCGATC+TGG 0.497428 7_4:+59178656 Msa1167010:intron
AAAGGTAGGAGGTCTATCTC+TGG 0.501270 7_4:+59180645 Msa1167010:CDS
ACTCAGGAGATGGAATAGAC+TGG 0.502001 7_4:+59180754 Msa1167010:CDS
GAAAGCTTGAACAAGAAGCT+TGG 0.502670 7_4:+59180024 Msa1167010:CDS
TTCTTCGTCGTTCAAGTGCG+TGG 0.507442 7_4:-59180400 None:intergenic
TTTGGAGCTTCTCATCACCT+TGG 0.507910 7_4:-59180731 None:intergenic
ATGAAACGAAACAAAGCAAG+TGG 0.514799 7_4:-59177805 None:intergenic
ACTGAAGATAAAGAAGATGA+TGG 0.515684 7_4:+59180465 Msa1167010:CDS
ACTCCCACGGTAGATGAAGC+AGG 0.518052 7_4:-59179673 None:intergenic
CACCCTCCAATCACGCTCAT+CGG 0.520058 7_4:+59177709 None:intergenic
ATCAGCTCTGCATACTGAGC+TGG 0.520095 7_4:+59179810 Msa1167010:CDS
CCAAGCAAATACCCCTTGCT+AGG 0.520997 7_4:+59181103 Msa1167010:three_prime_UTR
TTCTTTCACCACCTTAAGAA+GGG 0.523005 7_4:-59180073 None:intergenic
TTGATGTAGAGCGGAAGCTA+AGG 0.527027 7_4:+59179992 Msa1167010:CDS
TTAAAGGATCAAATACTAGC+TGG 0.529312 7_4:+59180861 Msa1167010:CDS
CTCAGGAGATGGAATAGACT+GGG 0.532350 7_4:+59180755 Msa1167010:CDS
GACGGCGGCGGTGGATATCT+CGG 0.532828 7_4:-59178123 None:intergenic
CTCCCCGATTGCGACGGCGG+CGG 0.533125 7_4:-59178135 None:intergenic
ATAAGGGACATACTAGAAGA+AGG 0.533927 7_4:-59179787 None:intergenic
TTACTCCCCGATTGCGACGG+CGG 0.535219 7_4:-59178138 None:intergenic
AGAGAGACATGCTACAATGC+AGG 0.537155 7_4:+59180974 Msa1167010:CDS
ATGGTTGGATGAAATGGAGT+TGG 0.538947 7_4:-59177737 None:intergenic
GTATCAAATCTGCTTTCAGA+AGG 0.539038 7_4:-59180594 None:intergenic
CACCGCCGCCGTCGCAATCG+GGG 0.541732 7_4:+59178133 Msa1167010:CDS
AGTATCCGCATCGCCGACGC+TGG 0.544419 7_4:-59178093 None:intergenic
TAACAGCTTCCACGTAGGTA+CGG 0.544482 7_4:-59178058 None:intergenic
ATCAAGGTTAGGGGAAGCCA+GGG 0.544554 7_4:+59181010 Msa1167010:CDS
ATATCAGATGGAGTGGAATG+GGG 0.544741 7_4:+59180705 Msa1167010:CDS
ACCTTTCGAAGATCCAAGCC+TGG 0.545894 7_4:-59180886 None:intergenic
AAGCTCCAAAACTCAGGAGA+TGG 0.545906 7_4:+59180744 Msa1167010:CDS
CGCGTTTGAATCTGTAGTTG+TGG 0.547592 7_4:-59177996 None:intergenic
TAAATTATGAGCCTCACCCC+TGG 0.548141 7_4:-59181027 None:intergenic
TCCAGGCTTGGATCTTCGAA+AGG 0.552565 7_4:+59180885 Msa1167010:CDS
ATGGGATCTCGTGAAGGCCA+AGG 0.553657 7_4:-59180939 None:intergenic
TTAAAATTATAAACCGCATG+TGG 0.555129 7_4:+59179749 Msa1167010:CDS
TCACGAGGTAGAGAAAGAAA+AGG 0.555289 7_4:+59180215 Msa1167010:CDS
ATGCTGCTGTTGATATGCTC+AGG 0.556277 7_4:+59180322 Msa1167010:CDS
GATTTACTCCCCGATTGCGA+CGG 0.557094 7_4:-59178141 None:intergenic
GAGTAAATCAAAGCAAGCTC+CGG 0.558371 7_4:+59178155 Msa1167010:CDS
TAAAATTATAAACCGCATGT+GGG 0.559331 7_4:+59179750 Msa1167010:CDS
AACAGCTTCCACGTAGGTAC+GGG 0.561157 7_4:-59178057 None:intergenic
GTTAGGGGAAGCCAGGGGTG+AGG 0.562101 7_4:+59181016 Msa1167010:CDS
GTATATCAGATGGAGTGGAA+TGG 0.562653 7_4:+59180703 Msa1167010:CDS
GCGGAAGCTAAGGAGACGGT+TGG 0.563922 7_4:+59180002 Msa1167010:CDS
GTAGAGTGTCAAGAGGAATC+CGG 0.568280 7_4:+59180504 Msa1167010:CDS
CAAAGCTATAAATCAGTGAA+AGG 0.569862 7_4:+59180837 Msa1167010:CDS
TCACGCATTTCCTTAACACT+AGG 0.573536 7_4:-59178231 None:intergenic
GATGAGAAGCTCCAAAACTC+AGG 0.575179 7_4:+59180738 Msa1167010:CDS
CTCTGCATACTGAGCTGGAG+AGG 0.576008 7_4:+59179815 Msa1167010:CDS
CGTGGCGGAATATGGATGGT+TGG 0.576505 7_4:-59177752 None:intergenic
TATTTAACTCTATAGAATGC+AGG 0.578793 7_4:-59180536 None:intergenic
AAATCTGCTTTCAGAAGGGT+AGG 0.578866 7_4:-59180589 None:intergenic
GGATAAGCTGATTAACCTGT+AGG 0.578986 7_4:-59179843 None:intergenic
CTCGACCTGTGTGAATTGCT+CGG 0.579001 7_4:-59178704 None:intergenic
TTCACATAGTCCTCCATCAG+AGG 0.582500 7_4:+59178350 Msa1167010:CDS
CGAGCAATTCACACAGGTCG+AGG 0.587010 7_4:+59178705 Msa1167010:CDS
GAGGAGTATATCAGATGGAG+TGG 0.588143 7_4:+59180698 Msa1167010:CDS
TCTGCATACTGAGCTGGAGA+GGG 0.588803 7_4:+59179816 Msa1167010:CDS
CTTGTAGGTAAAAGGGGAGG+CGG 0.589140 7_4:+59178024 Msa1167010:CDS
CTCCCACGGTAGATGAAGCA+GGG 0.590806 7_4:-59179672 None:intergenic
AGATAAAGAAGATGATGGAG+AGG 0.590807 7_4:+59180470 Msa1167010:CDS
TAAGGGACATACTAGAAGAA+GGG 0.595038 7_4:-59179786 None:intergenic
CTGCAGAGGAGTATATCAGA+TGG 0.596087 7_4:+59180693 Msa1167010:CDS
AATCCGAGATAGATAAACAA+AGG 0.602124 7_4:+59180172 Msa1167010:CDS
GAGAGACATGCTACAATGCA+GGG 0.603310 7_4:+59180975 Msa1167010:CDS
CAAACGTGGTTTAACTCCCA+CGG 0.603600 7_4:-59179686 None:intergenic
AAGATAGGGTTTCAACTGCT+AGG 0.604487 7_4:+59178286 Msa1167010:CDS
TATCAAATCTGCTTTCAGAA+GGG 0.612920 7_4:-59180593 None:intergenic
GATCTCCAGCGTCGGCGATG+CGG 0.614483 7_4:+59178088 Msa1167010:CDS
ACCCCTGCTTCATCTACCGT+GGG 0.614755 7_4:+59179670 Msa1167010:CDS
GGTCTTCATGACCCCACATG+CGG 0.614966 7_4:-59179762 None:intergenic
GGTTGGATGAAATGGAGTTG+GGG 0.615091 7_4:-59177735 None:intergenic
CTATTTATGGGATCTCGTGA+AGG 0.615326 7_4:-59180945 None:intergenic
AGGAAGAAATAAAAGGTAGG+AGG 0.617173 7_4:+59180634 Msa1167010:CDS
GCTATTCTTGTAGGTAAAAG+GGG 0.622409 7_4:+59178018 Msa1167010:CDS
TATCAGATGGAGTGGAATGG+GGG 0.623899 7_4:+59180706 Msa1167010:CDS
CGAAGCAAAATATCAACATG+AGG 0.624711 7_4:+59180293 Msa1167010:CDS
TCGAGGAAGAAATAAAAGGT+AGG 0.625388 7_4:+59180631 Msa1167010:CDS
GAAAGCATCCCTTCTTAAGG+TGG 0.630764 7_4:+59180065 Msa1167010:CDS
TGTGAAGGATCAGACAAATG+AGG 0.633486 7_4:-59178333 None:intergenic
GAACTGGAGAAACAAGCTCA+AGG 0.637215 7_4:+59180789 Msa1167010:CDS
CAATGGTGTAGAGTGTCAAG+AGG 0.641360 7_4:+59180497 Msa1167010:CDS
GACCCCTGCTTCATCTACCG+TGG 0.641700 7_4:+59179669 Msa1167010:CDS
AAGAATCCAAAGGACCAACA+TGG 0.642047 7_4:-59178745 None:intergenic
TCTGATGGAGGACTATGTGA+AGG 0.643240 7_4:-59178348 None:intergenic
GGATAAGCACATCTCTGCAG+AGG 0.643419 7_4:+59180679 Msa1167010:CDS
TACAAGAAAATATCCAATCG+AGG 0.645942 7_4:+59180614 Msa1167010:CDS
AAGCTCGCGATCTCCAGCGT+CGG 0.647327 7_4:+59178080 Msa1167010:CDS
ATGAGATAACTCCATAACAC+TGG 0.651432 7_4:-59178777 None:intergenic
ATTTCCTTAACACTAGGCGA+AGG 0.652929 7_4:-59178225 None:intergenic
ATTACGTGGCGGAATATGGA+TGG 0.653380 7_4:-59177756 None:intergenic
CAGGAGAACTTGATGTAGAG+CGG 0.654347 7_4:+59179983 Msa1167010:CDS
CCTGGTAAAATACGGAAACG+AGG 0.654966 7_4:+59177934 Msa1167010:CDS
AAAGGCTTCTTGGAAAACCA+AGG 0.655680 7_4:+59179924 Msa1167010:CDS
CCACTACACCCGTACCTACG+TGG 0.656484 7_4:+59178049 Msa1167010:CDS
AAAATTATAAACCGCATGTG+GGG 0.658914 7_4:+59179751 Msa1167010:CDS
ACAGAACAACATCACCATGT+TGG 0.658995 7_4:+59178731 Msa1167010:CDS
TAGAGCGGAAGCTAAGGAGA+CGG 0.666989 7_4:+59179998 Msa1167010:CDS
TTACTGACATCTTTCAAACG+TGG 0.669903 7_4:-59179700 None:intergenic
TCCCACGGTAGATGAAGCAG+GGG 0.671790 7_4:-59179671 None:intergenic
GTAGTTGTGGTTAATTACTG+AGG 0.672451 7_4:-59177983 None:intergenic
GTTAACCGATATGTTACGCG+AGG 0.681573 7_4:+59180248 Msa1167010:CDS
CAAGGAGCGAGAAATTGTTG+AGG 0.687082 7_4:+59179942 Msa1167010:CDS
GAAGGATCAGACAAATGAGG+AGG 0.689178 7_4:-59178330 None:intergenic
GATGATGGAGAGGTTGACAA+TGG 0.693762 7_4:+59180480 Msa1167010:CDS
TGAAACGAAACAAAGCAAGT+GGG 0.694513 7_4:-59177804 None:intergenic
GTCAACAAAAGCTTGTCACG+AGG 0.701503 7_4:+59180200 Msa1167010:CDS
GAACACCGAGCAATTCACAC+AGG 0.703603 7_4:+59178699 Msa1167010:CDS
GCATTACTAAAAGAATCCAA+AGG 0.704154 7_4:-59178755 None:intergenic
AGAGTGTATGAGTGATTACG+TGG 0.711162 7_4:-59177770 None:intergenic
GGGACATACTAGAAGAAGGG+CGG 0.712124 7_4:-59179783 None:intergenic
GTTAGCAAGAGATGTTGACG+AGG 0.712651 7_4:+59180146 Msa1167010:CDS
ATTCTTGTAGGTAAAAGGGG+AGG 0.721390 7_4:+59178021 Msa1167010:CDS
GTGTATGAGTGATTACGTGG+CGG 0.724085 7_4:-59177767 None:intergenic
TCAAGGTTAGGGGAAGCCAG+GGG 0.732433 7_4:+59181011 Msa1167010:CDS
GGTATCGGCGAGAAAACTAG+CGG 0.739507 7_4:+59178176 Msa1167010:CDS
GAGCTTAACAGCTTCCACGT+AGG 0.748381 7_4:-59178063 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATACATTATTTTGAA+TGG + chr7_4:59179490-59179509 Msa1167010:intron 10.0%
!! AAACACTGATAAATTATTAT+TGG - chr7_4:59179041-59179060 None:intergenic 15.0%
!! AAGAAGTTAAAACAAAAGAT+AGG + chr7_4:59178271-59178290 Msa1167010:CDS 20.0%
!! AGAAGTTAAAACAAAAGATA+GGG + chr7_4:59178272-59178291 Msa1167010:CDS 20.0%
!!! TTTTGTACTATTGCATAATT+TGG + chr7_4:59178571-59178590 Msa1167010:intron 20.0%
!! TTGTTTATTATTGTAGAGAA+TGG + chr7_4:59178646-59178665 Msa1167010:intron 20.0%
!!! CTTCATGTAGAATTTTTTAT+TGG + chr7_4:59178927-59178946 Msa1167010:intron 20.0%
!! AATACAAGATTTACTGAAAA+AGG + chr7_4:59179407-59179426 Msa1167010:intron 20.0%
!! AAATTATCAAAGAGTTAAGA+GGG - chr7_4:59179564-59179583 None:intergenic 20.0%
!! TAAATTATCAAAGAGTTAAG+AGG - chr7_4:59179565-59179584 None:intergenic 20.0%
!! ATTTAATAAGGAAGTCTAAA+AGG + chr7_4:59181045-59181064 Msa1167010:CDS 20.0%
!! CAAAATCTAAAAACTTGAAA+TGG - chr7_4:59181151-59181170 None:intergenic 20.0%
!! CTTTGTGTTGATGAATTAAT+TGG - chr7_4:59177842-59177861 None:intergenic 25.0%
! AACAAAATCAACTACAACAA+TGG + chr7_4:59177900-59177919 Msa1167010:CDS 25.0%
! CAATTAATTCACAACACAAT+AGG - chr7_4:59178441-59178460 None:intergenic 25.0%
! TACTATTGCATAATTTGGTT+TGG + chr7_4:59178576-59178595 Msa1167010:intron 25.0%
!! TGATTTTGTCTATTTGTTCA+TGG + chr7_4:59178836-59178855 Msa1167010:intron 25.0%
!! GATTTTGTCTATTTGTTCAT+GGG + chr7_4:59178837-59178856 Msa1167010:intron 25.0%
! ACTTACATATGTAACTTAGT+AGG + chr7_4:59178868-59178887 Msa1167010:intron 25.0%
!!! TTAGGTCATTGTTTTATAGA+TGG + chr7_4:59179251-59179270 Msa1167010:intron 25.0%
! ACAAATACAATGAATAGCAA+GGG - chr7_4:59179334-59179353 None:intergenic 25.0%
! TACAAATACAATGAATAGCA+AGG - chr7_4:59179335-59179354 None:intergenic 25.0%
!!! TGCACATCATATGTTATTTT+TGG - chr7_4:59179594-59179613 None:intergenic 25.0%
! TTAAAATTATAAACCGCATG+TGG + chr7_4:59179749-59179768 Msa1167010:CDS 25.0%
! TAAAATTATAAACCGCATGT+GGG + chr7_4:59179750-59179769 Msa1167010:CDS 25.0%
! TTCTTTATCTTCAGTATGAT+GGG - chr7_4:59180460-59180479 None:intergenic 25.0%
! TATTTAACTCTATAGAATGC+AGG - chr7_4:59180539-59180558 None:intergenic 25.0%
! GCATTCTATAGAGTTAAATA+TGG + chr7_4:59180539-59180558 Msa1167010:CDS 25.0%
! TAAATCAGTGAAAGGATTAA+AGG + chr7_4:59180845-59180864 Msa1167010:CDS 25.0%
! ACATGTGTTATAAGTATAAC+CGG + chr7_4:59181252-59181271 Msa1167010:three_prime_UTR 25.0%
TGATGATTCCTGGTAAAATA+CGG + chr7_4:59177926-59177945 Msa1167010:CDS 30.0%
AACAAAAATGAAACCTCTGA+TGG - chr7_4:59178366-59178385 None:intergenic 30.0%
TAATTTCTGTTCTGTCATTG+TGG + chr7_4:59178414-59178433 Msa1167010:intron 30.0%
! TGCTTGTAACTTGTAAATGA+AGG - chr7_4:59178532-59178551 None:intergenic 30.0%
GCATTACTAAAAGAATCCAA+AGG - chr7_4:59178758-59178777 None:intergenic 30.0%
! TTTTAGTAATGCCAGTGTTA+TGG + chr7_4:59178766-59178785 Msa1167010:CDS 30.0%
! TAGGAACTTGATTTTCTCAT+TGG + chr7_4:59178887-59178906 Msa1167010:intron 30.0%
! AGGAACTTGATTTTCTCATT+GGG + chr7_4:59178888-59178907 Msa1167010:intron 30.0%
AAAACCCATGTAAAAATCAG+CGG + chr7_4:59179167-59179186 Msa1167010:intron 30.0%
AAATGAAACAATCGTTGAGT+TGG + chr7_4:59179193-59179212 Msa1167010:intron 30.0%
GATACGAATAGAGAACAAAT+TGG - chr7_4:59179443-59179462 None:intergenic 30.0%
AAAATTATAAACCGCATGTG+GGG + chr7_4:59179751-59179770 Msa1167010:CDS 30.0%
AATCCGAGATAGATAAACAA+AGG + chr7_4:59180172-59180191 Msa1167010:CDS 30.0%
! TCTCCTTTGTTTATCTATCT+CGG - chr7_4:59180178-59180197 None:intergenic 30.0%
! CTCATGTTGATATTTTGCTT+CGG - chr7_4:59180295-59180314 None:intergenic 30.0%
AGCAAACAAGTAAGAGAAAA+GGG + chr7_4:59180369-59180388 Msa1167010:CDS 30.0%
CTTCTTTATCTTCAGTATGA+TGG - chr7_4:59180461-59180480 None:intergenic 30.0%
ACTGAAGATAAAGAAGATGA+TGG + chr7_4:59180465-59180484 Msa1167010:CDS 30.0%
GCAACAACAAAAACTATAAG+TGG + chr7_4:59180565-59180584 Msa1167010:CDS 30.0%
TATCAAATCTGCTTTCAGAA+GGG - chr7_4:59180596-59180615 None:intergenic 30.0%
TACAAGAAAATATCCAATCG+AGG + chr7_4:59180614-59180633 Msa1167010:CDS 30.0%
CAAAGCTATAAATCAGTGAA+AGG + chr7_4:59180837-59180856 Msa1167010:CDS 30.0%
TTAAAGGATCAAATACTAGC+TGG + chr7_4:59180861-59180880 Msa1167010:CDS 30.0%
AATGGTCAAAAATCAAGGTT+AGG + chr7_4:59180999-59181018 Msa1167010:CDS 30.0%
ATGGTCAAAAATCAAGGTTA+GGG + chr7_4:59181000-59181019 Msa1167010:CDS 30.0%
GTGAGGCTCATAATTTAATA+AGG + chr7_4:59181033-59181052 Msa1167010:CDS 30.0%
! AAATGGAGAAAAGCTTCTTT+TGG - chr7_4:59181134-59181153 None:intergenic 30.0%
TTGACCAATATGAGTAAGTA+TGG + chr7_4:59181209-59181228 Msa1167010:three_prime_UTR 30.0%
AAGACCATACTTACTCATAT+TGG - chr7_4:59181216-59181235 None:intergenic 30.0%
ATATGGATGGTTGGATGAAA+TGG - chr7_4:59177746-59177765 None:intergenic 35.0%
AACAAAGCAAGTGGGAAAAA+AGG - chr7_4:59177799-59177818 None:intergenic 35.0%
TGAAACGAAACAAAGCAAGT+GGG - chr7_4:59177807-59177826 None:intergenic 35.0%
ATGAAACGAAACAAAGCAAG+TGG - chr7_4:59177808-59177827 None:intergenic 35.0%
GTAGTTGTGGTTAATTACTG+AGG - chr7_4:59177986-59178005 None:intergenic 35.0%
CGCTATTCTTGTAGGTAAAA+GGG + chr7_4:59178017-59178036 Msa1167010:CDS 35.0%
GCTATTCTTGTAGGTAAAAG+GGG + chr7_4:59178018-59178037 Msa1167010:CDS 35.0%
AAAAATGAAACCTCTGATGG+AGG - chr7_4:59178363-59178382 None:intergenic 35.0%
ATGAGATAACTCCATAACAC+TGG - chr7_4:59178780-59178799 None:intergenic 35.0%
!! TGTTGTCTGCTTTGAAAATG+TGG + chr7_4:59178812-59178831 Msa1167010:intron 35.0%
GTCTATTTGTTCATGGGAAT+AGG + chr7_4:59178843-59178862 Msa1167010:intron 35.0%
! GGAACTTGATTTTCTCATTG+GGG + chr7_4:59178889-59178908 Msa1167010:intron 35.0%
TGATGCAATGAAGTGAGAAA+TGG - chr7_4:59179007-59179026 None:intergenic 35.0%
CTCACTTCATTGCATCAAAT+AGG + chr7_4:59179010-59179029 Msa1167010:intron 35.0%
ACTTCATTGCATCAAATAGG+TGG + chr7_4:59179013-59179032 Msa1167010:intron 35.0%
TGAATCCATTCATGTTCATG+CGG - chr7_4:59179095-59179114 None:intergenic 35.0%
!!! TCTTCCGCTGATTTTTACAT+GGG - chr7_4:59179174-59179193 None:intergenic 35.0%
!!! TTCTTCCGCTGATTTTTACA+TGG - chr7_4:59179175-59179194 None:intergenic 35.0%
TGCATCTACTAGAATTTCGA+TGG + chr7_4:59179356-59179375 Msa1167010:intron 35.0%
GTTCTCTATTCGTATCAGAA+TGG + chr7_4:59179447-59179466 Msa1167010:intron 35.0%
TTACTGACATCTTTCAAACG+TGG - chr7_4:59179703-59179722 None:intergenic 35.0%
TAAGGGACATACTAGAAGAA+GGG - chr7_4:59179789-59179808 None:intergenic 35.0%
ATAAGGGACATACTAGAAGA+AGG - chr7_4:59179790-59179809 None:intergenic 35.0%
AGTATGCAGAGCTGATATAA+GGG - chr7_4:59179806-59179825 None:intergenic 35.0%
! TTTCCAAGAAGCCTTTTCTT+CGG - chr7_4:59179920-59179939 None:intergenic 35.0%
AAAGCTTGAACAAGAAGCTT+GGG + chr7_4:59180025-59180044 Msa1167010:CDS 35.0%
TTCTTTCACCACCTTAAGAA+GGG - chr7_4:59180076-59180095 None:intergenic 35.0%
CGAAGCAAAATATCAACATG+AGG + chr7_4:59180293-59180312 Msa1167010:CDS 35.0%
! AATCAGCTTGAAGCTTTTCT+AGG + chr7_4:59180345-59180364 Msa1167010:CDS 35.0%
CAGCAAACAAGTAAGAGAAA+AGG + chr7_4:59180368-59180387 Msa1167010:CDS 35.0%
!! AGATAAAGAAGATGATGGAG+AGG + chr7_4:59180470-59180489 Msa1167010:CDS 35.0%
GTATCAAATCTGCTTTCAGA+AGG - chr7_4:59180597-59180616 None:intergenic 35.0%
!! CCTTTTATTTCTTCCTCGAT+TGG - chr7_4:59180630-59180649 None:intergenic 35.0%
CCAATCGAGGAAGAAATAAA+AGG + chr7_4:59180627-59180646 Msa1167010:CDS 35.0%
TCGAGGAAGAAATAAAAGGT+AGG + chr7_4:59180631-59180650 Msa1167010:CDS 35.0%
AGGAAGAAATAAAAGGTAGG+AGG + chr7_4:59180634-59180653 Msa1167010:CDS 35.0%
TATATCAGATGGAGTGGAAT+GGG + chr7_4:59180704-59180723 Msa1167010:CDS 35.0%
CAAGCTCAAGGAAAAAGTTA+CGG + chr7_4:59180801-59180820 Msa1167010:CDS 35.0%
GGTTGTGAAAATTGTCTAGT+TGG - chr7_4:59180921-59180940 None:intergenic 35.0%
! CTAGACAATTTTCACAACCT+TGG + chr7_4:59180922-59180941 Msa1167010:CDS 35.0%
CTCTCTTGGAAGCTATTTAT+GGG - chr7_4:59180960-59180979 None:intergenic 35.0%
TCTCTCTTGGAAGCTATTTA+TGG - chr7_4:59180961-59180980 None:intergenic 35.0%
AGGGAAATGGTCAAAAATCA+AGG + chr7_4:59180994-59181013 Msa1167010:CDS 35.0%
TGGTCAAAAATCAAGGTTAG+GGG + chr7_4:59181001-59181020 Msa1167010:CDS 35.0%
TGGTTGGATGAAATGGAGTT+GGG - chr7_4:59177739-59177758 None:intergenic 40.0%
ATGGTTGGATGAAATGGAGT+TGG - chr7_4:59177740-59177759 None:intergenic 40.0%
AGAGTGTATGAGTGATTACG+TGG - chr7_4:59177773-59177792 None:intergenic 40.0%
ACAATGGACATGATGATTCC+TGG + chr7_4:59177916-59177935 Msa1167010:CDS 40.0%
TTCAAACGCGCTATTCTTGT+AGG + chr7_4:59178009-59178028 Msa1167010:CDS 40.0%
GCGCTATTCTTGTAGGTAAA+AGG + chr7_4:59178016-59178035 Msa1167010:CDS 40.0%
ATTCTTGTAGGTAAAAGGGG+AGG + chr7_4:59178021-59178040 Msa1167010:CDS 40.0%
GAGTAAATCAAAGCAAGCTC+CGG + chr7_4:59178155-59178174 Msa1167010:CDS 40.0%
ATTTCCTTAACACTAGGCGA+AGG - chr7_4:59178228-59178247 None:intergenic 40.0%
TCACGCATTTCCTTAACACT+AGG - chr7_4:59178234-59178253 None:intergenic 40.0%
AAGATAGGGTTTCAACTGCT+AGG + chr7_4:59178286-59178305 Msa1167010:CDS 40.0%
TGTGAAGGATCAGACAAATG+AGG - chr7_4:59178336-59178355 None:intergenic 40.0%
TTGTAGAGAATGGATCGATC+TGG + chr7_4:59178656-59178675 Msa1167010:intron 40.0%
! AGAATGGATCGATCTGGAAT+TGG + chr7_4:59178662-59178681 Msa1167010:CDS 40.0%
ACAGAACAACATCACCATGT+TGG + chr7_4:59178731-59178750 Msa1167010:CDS 40.0%
AAGAATCCAAAGGACCAACA+TGG - chr7_4:59178748-59178767 None:intergenic 40.0%
GTTTGACCTGTGTTCACTTT+AGG + chr7_4:59179233-59179252 Msa1167010:intron 40.0%
CAATGACCTAAAGTGAACAC+AGG - chr7_4:59179242-59179261 None:intergenic 40.0%
TCAACAATGAACATGGCAGT+TGG - chr7_4:59179307-59179326 None:intergenic 40.0%
GGGCATATCAACAATGAACA+TGG - chr7_4:59179314-59179333 None:intergenic 40.0%
CATGTCTTATAGTAGCGTCT+TGG + chr7_4:59179612-59179631 Msa1167010:intron 40.0%
CAGTATGCAGAGCTGATATA+AGG - chr7_4:59179807-59179826 None:intergenic 40.0%
GGATAAGCTGATTAACCTGT+AGG - chr7_4:59179846-59179865 None:intergenic 40.0%
!! GAAGTGTTTTGCCGAAGAAA+AGG + chr7_4:59179906-59179925 Msa1167010:CDS 40.0%
AAAGGCTTCTTGGAAAACCA+AGG + chr7_4:59179924-59179943 Msa1167010:CDS 40.0%
GAAAGCTTGAACAAGAAGCT+TGG + chr7_4:59180024-59180043 Msa1167010:CDS 40.0%
GTTCTTTCACCACCTTAAGA+AGG - chr7_4:59180077-59180096 None:intergenic 40.0%
TCACGAGGTAGAGAAAGAAA+AGG + chr7_4:59180215-59180234 Msa1167010:CDS 40.0%
AAATCTGCTTTCAGAAGGGT+AGG - chr7_4:59180592-59180611 None:intergenic 40.0%
GTATATCAGATGGAGTGGAA+TGG + chr7_4:59180703-59180722 Msa1167010:CDS 40.0%
ATATCAGATGGAGTGGAATG+GGG + chr7_4:59180705-59180724 Msa1167010:CDS 40.0%
! CTATTCCATCTCCTGAGTTT+TGG - chr7_4:59180752-59180771 None:intergenic 40.0%
! CTGGGAAAGCTTTTATGAAC+TGG + chr7_4:59180773-59180792 Msa1167010:CDS 40.0%
! ATCAAATACTAGCTGGTTCC+AGG + chr7_4:59180868-59180887 Msa1167010:CDS 40.0%
CTATTTATGGGATCTCGTGA+AGG - chr7_4:59180948-59180967 None:intergenic 40.0%
!!! TTTTGGTTTCTCCTAGCAAG+GGG - chr7_4:59181117-59181136 None:intergenic 40.0%
!!! CTTTTGGTTTCTCCTAGCAA+GGG - chr7_4:59181118-59181137 None:intergenic 40.0%
!!! TCTTTTGGTTTCTCCTAGCA+AGG - chr7_4:59181119-59181138 None:intergenic 40.0%
GGTTGGATGAAATGGAGTTG+GGG - chr7_4:59177738-59177757 None:intergenic 45.0%
! ATTACGTGGCGGAATATGGA+TGG - chr7_4:59177759-59177778 None:intergenic 45.0%
! AGTGATTACGTGGCGGAATA+TGG - chr7_4:59177763-59177782 None:intergenic 45.0%
GTGTATGAGTGATTACGTGG+CGG - chr7_4:59177770-59177789 None:intergenic 45.0%
! CCTCGTTTCCGTATTTTACC+AGG - chr7_4:59177937-59177956 None:intergenic 45.0%
CCTGGTAAAATACGGAAACG+AGG + chr7_4:59177934-59177953 Msa1167010:CDS 45.0%
CGCGTTTGAATCTGTAGTTG+TGG - chr7_4:59177999-59178018 None:intergenic 45.0%
TAACAGCTTCCACGTAGGTA+CGG - chr7_4:59178061-59178080 None:intergenic 45.0%
ATCAAAGCAAGCTCCGGTAT+CGG + chr7_4:59178161-59178180 Msa1167010:CDS 45.0%
GATTCCTTCGCCTAGTGTTA+AGG + chr7_4:59178221-59178240 Msa1167010:CDS 45.0%
ACTGCTAGGTCTATTCGTTC+TGG + chr7_4:59178300-59178319 Msa1167010:CDS 45.0%
GAAGGATCAGACAAATGAGG+AGG - chr7_4:59178333-59178352 None:intergenic 45.0%
TCTGATGGAGGACTATGTGA+AGG - chr7_4:59178351-59178370 None:intergenic 45.0%
TTCACATAGTCCTCCATCAG+AGG + chr7_4:59178350-59178369 Msa1167010:CDS 45.0%
TTCCAGACTGACACATGATC+TGG - chr7_4:59178504-59178523 None:intergenic 45.0%
ACATCACCATGTTGGTCCTT+TGG + chr7_4:59178739-59178758 Msa1167010:CDS 45.0%
TGACTCCGCATGAACATGAA+TGG + chr7_4:59179087-59179106 Msa1167010:intron 45.0%
CAAACGTGGTTTAACTCCCA+CGG - chr7_4:59179689-59179708 None:intergenic 45.0%
TCTGATCTGAACGTTGTTCG+TGG - chr7_4:59179867-59179886 None:intergenic 45.0%
TTGCCGAAGAAAAGGCTTCT+TGG + chr7_4:59179914-59179933 Msa1167010:CDS 45.0%
CTCAACAATTTCTCGCTCCT+TGG - chr7_4:59179944-59179963 None:intergenic 45.0%
CAAGGAGCGAGAAATTGTTG+AGG + chr7_4:59179942-59179961 Msa1167010:CDS 45.0%
GCTGCAATTGAATCTGTTGC+AGG + chr7_4:59179964-59179983 Msa1167010:CDS 45.0%
CAGGAGAACTTGATGTAGAG+CGG + chr7_4:59179983-59180002 Msa1167010:CDS 45.0%
TTGATGTAGAGCGGAAGCTA+AGG + chr7_4:59179992-59180011 Msa1167010:CDS 45.0%
!! GACGAAAGCATCCCTTCTTA+AGG + chr7_4:59180062-59180081 Msa1167010:CDS 45.0%
!! GAAAGCATCCCTTCTTAAGG+TGG + chr7_4:59180065-59180084 Msa1167010:CDS 45.0%
GTTAGCAAGAGATGTTGACG+AGG + chr7_4:59180146-59180165 Msa1167010:CDS 45.0%
GTCAACAAAAGCTTGTCACG+AGG + chr7_4:59180200-59180219 Msa1167010:CDS 45.0%
GTTAACCGATATGTTACGCG+AGG + chr7_4:59180248-59180267 Msa1167010:CDS 45.0%
TCTCTCCTCGCGTAACATAT+CGG - chr7_4:59180256-59180275 None:intergenic 45.0%
ATGCTGCTGTTGATATGCTC+AGG + chr7_4:59180322-59180341 Msa1167010:CDS 45.0%
!! GATGATGGAGAGGTTGACAA+TGG + chr7_4:59180480-59180499 Msa1167010:CDS 45.0%
! CAATGGTGTAGAGTGTCAAG+AGG + chr7_4:59180497-59180516 Msa1167010:CDS 45.0%
! GTAGAGTGTCAAGAGGAATC+CGG + chr7_4:59180504-59180523 Msa1167010:CDS 45.0%
! AGAATGCAGGTCACTTTCAC+CGG - chr7_4:59180526-59180545 None:intergenic 45.0%
AAAGGTAGGAGGTCTATCTC+TGG + chr7_4:59180645-59180664 Msa1167010:CDS 45.0%
! CTATCTCTGGAAGAGCTTCA+AGG + chr7_4:59180658-59180677 Msa1167010:CDS 45.0%
! CTGCAGAGGAGTATATCAGA+TGG + chr7_4:59180693-59180712 Msa1167010:CDS 45.0%
! GAGGAGTATATCAGATGGAG+TGG + chr7_4:59180698-59180717 Msa1167010:CDS 45.0%
TATCAGATGGAGTGGAATGG+GGG + chr7_4:59180706-59180725 Msa1167010:CDS 45.0%
! TTTGGAGCTTCTCATCACCT+TGG - chr7_4:59180734-59180753 None:intergenic 45.0%
GATGAGAAGCTCCAAAACTC+AGG + chr7_4:59180738-59180757 Msa1167010:CDS 45.0%
AAGCTCCAAAACTCAGGAGA+TGG + chr7_4:59180744-59180763 Msa1167010:CDS 45.0%
ACTCAGGAGATGGAATAGAC+TGG + chr7_4:59180754-59180773 Msa1167010:CDS 45.0%
CTCAGGAGATGGAATAGACT+GGG + chr7_4:59180755-59180774 Msa1167010:CDS 45.0%
GAACTGGAGAAACAAGCTCA+AGG + chr7_4:59180789-59180808 Msa1167010:CDS 45.0%
GCATTGTAGCATGTCTCTCT+TGG - chr7_4:59180974-59180993 None:intergenic 45.0%
AGAGAGACATGCTACAATGC+AGG + chr7_4:59180974-59180993 Msa1167010:CDS 45.0%
GAGAGACATGCTACAATGCA+GGG + chr7_4:59180975-59180994 Msa1167010:CDS 45.0%
CATGCTACAATGCAGGGAAA+TGG + chr7_4:59180981-59181000 Msa1167010:CDS 45.0%
TAAATTATGAGCCTCACCCC+TGG - chr7_4:59181030-59181049 None:intergenic 45.0%
GGGTATTTGCTTGGCAAACA+AGG - chr7_4:59181097-59181116 None:intergenic 45.0%
!! TTATTTAATATAATAAAATG+AGG + chr7_4:59178466-59178485 Msa1167010:intron 5.0%
CTTGTAGGTAAAAGGGGAGG+CGG + chr7_4:59178024-59178043 Msa1167010:CDS 50.0%
AACAGCTTCCACGTAGGTAC+GGG - chr7_4:59178060-59178079 None:intergenic 50.0%
GAGCTTAACAGCTTCCACGT+AGG - chr7_4:59178066-59178085 None:intergenic 50.0%
GATTTACTCCCCGATTGCGA+CGG - chr7_4:59178144-59178163 None:intergenic 50.0%
!!! GCTAGTTTTCTCGCCGATAC+CGG - chr7_4:59178177-59178196 None:intergenic 50.0%
!! GGTATCGGCGAGAAAACTAG+CGG + chr7_4:59178176-59178195 Msa1167010:CDS 50.0%
AAAACTAGCGGCGACGCTTT+GGG + chr7_4:59178188-59178207 Msa1167010:CDS 50.0%
GTCCAGATCATGTGTCAGTC+TGG + chr7_4:59178499-59178518 Msa1167010:intron 50.0%
GAACACCGAGCAATTCACAC+AGG + chr7_4:59178699-59178718 Msa1167010:CDS 50.0%
CTCGACCTGTGTGAATTGCT+CGG - chr7_4:59178707-59178726 None:intergenic 50.0%
GGGACATACTAGAAGAAGGG+CGG - chr7_4:59179786-59179805 None:intergenic 50.0%
ATCAGCTCTGCATACTGAGC+TGG + chr7_4:59179810-59179829 Msa1167010:CDS 50.0%
TCTGCATACTGAGCTGGAGA+GGG + chr7_4:59179816-59179835 Msa1167010:CDS 50.0%
TAGAGCGGAAGCTAAGGAGA+CGG + chr7_4:59179998-59180017 Msa1167010:CDS 50.0%
CAAGAAGCTTGGGAGAGAAC+TGG + chr7_4:59180035-59180054 Msa1167010:CDS 50.0%
TTCTTCGTCGTTCAAGTGCG+TGG - chr7_4:59180403-59180422 None:intergenic 50.0%
GGATAAGCACATCTCTGCAG+AGG + chr7_4:59180679-59180698 Msa1167010:CDS 50.0%
! ATACTAGCTGGTTCCAGGCT+TGG + chr7_4:59180873-59180892 Msa1167010:CDS 50.0%
TCCAGGCTTGGATCTTCGAA+AGG + chr7_4:59180885-59180904 Msa1167010:CDS 50.0%
ACCTTTCGAAGATCCAAGCC+TGG - chr7_4:59180889-59180908 None:intergenic 50.0%
AATCAAGGTTAGGGGAAGCC+AGG + chr7_4:59181009-59181028 Msa1167010:CDS 50.0%
ATCAAGGTTAGGGGAAGCCA+GGG + chr7_4:59181010-59181029 Msa1167010:CDS 50.0%
!! CCTAGCAAGGGGTATTTGCT+TGG - chr7_4:59181106-59181125 None:intergenic 50.0%
CCAAGCAAATACCCCTTGCT+AGG + chr7_4:59181103-59181122 Msa1167010:three_prime_UTR 50.0%
! CGTGGCGGAATATGGATGGT+TGG - chr7_4:59177755-59177774 None:intergenic 55.0%
GAAAACTAGCGGCGACGCTT+TGG + chr7_4:59178187-59178206 Msa1167010:CDS 55.0%
CGAGCAATTCACACAGGTCG+AGG + chr7_4:59178705-59178724 Msa1167010:CDS 55.0%
ACCCCTGCTTCATCTACCGT+GGG + chr7_4:59179670-59179689 Msa1167010:CDS 55.0%
TCCCACGGTAGATGAAGCAG+GGG - chr7_4:59179674-59179693 None:intergenic 55.0%
CTCCCACGGTAGATGAAGCA+GGG - chr7_4:59179675-59179694 None:intergenic 55.0%
ACTCCCACGGTAGATGAAGC+AGG - chr7_4:59179676-59179695 None:intergenic 55.0%
GGTCTTCATGACCCCACATG+CGG - chr7_4:59179765-59179784 None:intergenic 55.0%
CTCTGCATACTGAGCTGGAG+AGG + chr7_4:59179815-59179834 Msa1167010:CDS 55.0%
ATGGGATCTCGTGAAGGCCA+AGG - chr7_4:59180942-59180961 None:intergenic 55.0%
TCAAGGTTAGGGGAAGCCAG+GGG + chr7_4:59181011-59181030 Msa1167010:CDS 55.0%
CCACGTAGGTACGGGTGTAG+TGG - chr7_4:59178052-59178071 None:intergenic 60.0%
CCACTACACCCGTACCTACG+TGG + chr7_4:59178049-59178068 Msa1167010:CDS 60.0%
AAGCTCGCGATCTCCAGCGT+CGG + chr7_4:59178080-59178099 Msa1167010:CDS 60.0%
TTACTCCCCGATTGCGACGG+CGG - chr7_4:59178141-59178160 None:intergenic 60.0%
AGGGGTCTGTGCTCGAGATC+TGG - chr7_4:59179656-59179675 None:intergenic 60.0%
GACCCCTGCTTCATCTACCG+TGG + chr7_4:59179669-59179688 Msa1167010:CDS 60.0%
GCGGAAGCTAAGGAGACGGT+TGG + chr7_4:59180002-59180021 Msa1167010:CDS 60.0%
GGAGTGGAATGGGGGAACCA+AGG + chr7_4:59180714-59180733 Msa1167010:CDS 60.0%
!! GATCTCCAGCGTCGGCGATG+CGG + chr7_4:59178088-59178107 Msa1167010:CDS 65.0%
AGTATCCGCATCGCCGACGC+TGG - chr7_4:59178096-59178115 None:intergenic 65.0%
GACGGCGGCGGTGGATATCT+CGG - chr7_4:59178126-59178145 None:intergenic 65.0%
GTTAGGGGAAGCCAGGGGTG+AGG + chr7_4:59181016-59181035 Msa1167010:CDS 65.0%
TCCACCGCCGCCGTCGCAAT+CGG + chr7_4:59178131-59178150 Msa1167010:CDS 70.0%
GCTGGAGAGGGCTCGCCTAC+AGG + chr7_4:59179828-59179847 Msa1167010:CDS 70.0%
CCACCGCCGCCGTCGCAATC+GGG + chr7_4:59178132-59178151 Msa1167010:CDS 75.0%
CACCGCCGCCGTCGCAATCG+GGG + chr7_4:59178133-59178152 Msa1167010:CDS 75.0%
CTCCCCGATTGCGACGGCGG+CGG - chr7_4:59178138-59178157 None:intergenic 75.0%
! CCCGATTGCGACGGCGGCGG+TGG - chr7_4:59178135-59178154 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59177720 59181278 59177720 ID=Msa1167010;Name=Msa1167010
chr7_4 mRNA 59177720 59181278 59177720 ID=Msa1167010-mRNA-1;Parent=Msa1167010;Name=Msa1167010-mRNA-1;_AED=0.09;_eAED=0.09;_QI=163|0.5|0.66|1|1|1|3|208|684
chr7_4 exon 59177720 59178371 59177720 ID=Msa1167010-mRNA-1:exon:18282;Parent=Msa1167010-mRNA-1
chr7_4 exon 59178662 59178802 59178662 ID=Msa1167010-mRNA-1:exon:18283;Parent=Msa1167010-mRNA-1
chr7_4 exon 59179646 59181278 59179646 ID=Msa1167010-mRNA-1:exon:18284;Parent=Msa1167010-mRNA-1
chr7_4 five_prime_UTR 59177720 59177882 59177720 ID=Msa1167010-mRNA-1:five_prime_utr;Parent=Msa1167010-mRNA-1
chr7_4 CDS 59177883 59178371 59177883 ID=Msa1167010-mRNA-1:cds;Parent=Msa1167010-mRNA-1
chr7_4 CDS 59178662 59178802 59178662 ID=Msa1167010-mRNA-1:cds;Parent=Msa1167010-mRNA-1
chr7_4 CDS 59179646 59181070 59179646 ID=Msa1167010-mRNA-1:cds;Parent=Msa1167010-mRNA-1
chr7_4 three_prime_UTR 59181071 59181278 59181071 ID=Msa1167010-mRNA-1:three_prime_utr;Parent=Msa1167010-mRNA-1
Gene Sequence

>Msa1167010

ATGCTTAAACAAAACAGAACAAAATCAACTACAACAATGGACATGATGATTCCTGGTAAAATACGGAAACGAGGTTGTTCATCATCAGCATCATCTTCATCCTCAGTAATTAACCACAACTACAGATTCAAACGCGCTATTCTTGTAGGTAAAAGGGGAGGCGGATCCACTACACCCGTACCTACGTGGAAGCTGTTAAGCTCGCGATCTCCAGCGTCGGCGATGCGGATACTTCAATCACCGAGATATCCACCGCCGCCGTCGCAATCGGGGAGTAAATCAAAGCAAGCTCCGGTATCGGCGAGAAAACTAGCGGCGACGCTTTGGGAAATGAATGAGATTCCTTCGCCTAGTGTTAAGGAAATGCGTGATCACGTGAAAATGAAAAAAGAAGTTAAAACAAAAGATAGGGTTTCAACTGCTAGGTCTATTCGTTCTGGTTCTTTGCCTCCTCATTTGTCTGATCCTTCACATAGTCCTCCATCAGAGAGAATGGATCGATCTGGAATTGGTAATCGACATAGAAGAACACCGAGCAATTCACACAGGTCGAGGTTAACAGAACAACATCACCATGTTGGTCCTTTGGATTCTTTTAGTAATGCCAGTGTTATGGAGTTATCTCATACAATTGAAACCAGATCTCGAGCACAGACCCCTGCTTCATCTACCGTGGGAGTTAAACCACGTTTGAAAGATGTCAGTAATGCATTGACAACATCAAAAGAGCTACTTAAAATTATAAACCGCATGTGGGGTCATGAAGACCGCCCTTCTTCTAGTATGTCCCTTATATCAGCTCTGCATACTGAGCTGGAGAGGGCTCGCCTACAGGTTAATCAGCTTATCCACGAACAACGTTCAGATCAGAATGAGATAAATTATTTGATGAAGTGTTTTGCCGAAGAAAAGGCTTCTTGGAAAACCAAGGAGCGAGAAATTGTTGAGGCTGCAATTGAATCTGTTGCAGGAGAACTTGATGTAGAGCGGAAGCTAAGGAGACGGTTGGAAAGCTTGAACAAGAAGCTTGGGAGAGAACTGGCTGAGACGAAAGCATCCCTTCTTAAGGTGGTGAAAGAACTTGAAACTGAAAAGAGAGAAAGAGAAATTATTGAAAAAGTATGTGATGAGTTAGCAAGAGATGTTGACGAGGATAAATCCGAGATAGATAAACAAAGGAGAGTGTCAACAAAAGCTTGTCACGAGGTAGAGAAAGAAAAGGAAATGATGCAGTTAACCGATATGTTACGCGAGGAGAGAGCTCAAAAGAAACTCTCCGAAGCAAAATATCAACATGAGGAAAAGAATGCTGCTGTTGATATGCTCAGGAATCAGCTTGAAGCTTTTCTAGGCAGCAAACAAGTAAGAGAAAAGGGACGTAGTTCCACGCACTTGAACGACGAAGAAATTTCTGCATATCTGAGCAGAAGCAGATTAGTCTCCCATCATACTGAAGATAAAGAAGATGATGGAGAGGTTGACAATGGTGTAGAGTGTCAAGAGGAATCCGGTGAAAGTGACCTGCATTCTATAGAGTTAAATATGGACAGCAACAACAAAAACTATAAGTGGACCTACCCTTCTGAAAGCAGATTTGATACAAGAAAATATCCAATCGAGGAAGAAATAAAAGGTAGGAGGTCTATCTCTGGAAGAGCTTCAAGGATAAGCACATCTCTGCAGAGGAGTATATCAGATGGAGTGGAATGGGGGAACCAAGGTGATGAGAAGCTCCAAAACTCAGGAGATGGAATAGACTGGGAAAGCTTTTATGAACTGGAGAAACAAGCTCAAGGAAAAAGTTACGGCGATGAAGTACAACAAAGCTATAAATCAGTGAAAGGATTAAAGGATCAAATACTAGCTGGTTCCAGGCTTGGATCTTCGAAAGGTTATGCTAGTCCAACTAGACAATTTTCACAACCTTGGCCTTCACGAGATCCCATAAATAGCTTCCAAGAGAGACATGCTACAATGCAGGGAAATGGTCAAAAATCAAGGTTAGGGGAAGCCAGGGGTGAGGCTCATAATTTAATAAGGAAGTCTAAAAGGTGA

Protein sequence

>Msa1167010

MLKQNRTKSTTTMDMMIPGKIRKRGCSSSASSSSSVINHNYRFKRAILVGKRGGGSTTPVPTWKLLSSRSPASAMRILQSPRYPPPPSQSGSKSKQAPVSARKLAATLWEMNEIPSPSVKEMRDHVKMKKEVKTKDRVSTARSIRSGSLPPHLSDPSHSPPSERMDRSGIGNRHRRTPSNSHRSRLTEQHHHVGPLDSFSNASVMELSHTIETRSRAQTPASSTVGVKPRLKDVSNALTTSKELLKIINRMWGHEDRPSSSMSLISALHTELERARLQVNQLIHEQRSDQNEINYLMKCFAEEKASWKTKEREIVEAAIESVAGELDVERKLRRRLESLNKKLGRELAETKASLLKVVKELETEKREREIIEKVCDELARDVDEDKSEIDKQRRVSTKACHEVEKEKEMMQLTDMLREERAQKKLSEAKYQHEEKNAAVDMLRNQLEAFLGSKQVREKGRSSTHLNDEEISAYLSRSRLVSHHTEDKEDDGEVDNGVECQEESGESDLHSIELNMDSNNKNYKWTYPSESRFDTRKYPIEEEIKGRRSISGRASRISTSLQRSISDGVEWGNQGDEKLQNSGDGIDWESFYELEKQAQGKSYGDEVQQSYKSVKGLKDQILAGSRLGSSKGYASPTRQFSQPWPSRDPINSFQERHATMQGNGQKSRLGEARGEAHNLIRKSKR*