AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1401910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401910 MtrunA17_Chr4g0044091 96.939 196 6 0 1 196 1 196 4.28e-139 386
Msa1401910 MtrunA17_Chr2g0308611 62.319 138 46 1 53 190 188 319 2.07e-52 171
Msa1401910 MtrunA17_Chr4g0055851 53.892 167 69 3 29 193 83 243 3.16e-49 161
Msa1401910 MtrunA17_Chr1g0175651 62.500 136 44 2 51 186 141 269 3.34e-49 162
Msa1401910 MtrunA17_Chr5g0400781 53.896 154 60 3 52 205 113 255 3.71e-49 161
Msa1401910 MtrunA17_Chr4g0054421 58.647 133 46 2 51 183 116 239 2.66e-48 159
Msa1401910 MtrunA17_Chr5g0399491 52.222 180 70 4 22 195 92 261 6.82e-48 158
Msa1401910 MtrunA17_Chr7g0258831 64.800 125 37 2 59 183 155 272 1.14e-47 158
Msa1401910 MtrunA17_Chr8g0335131 64.706 119 37 1 64 182 145 258 5.63e-47 156
Msa1401910 MtrunA17_Chr1g0151971 48.023 177 84 4 26 200 92 262 1.26e-43 147
Msa1401910 MtrunA17_Chr3g0135331 49.342 152 68 2 58 207 138 282 1.79e-35 126
Msa1401910 MtrunA17_Chr2g0299031 43.396 159 80 4 28 183 44 195 2.42e-34 121
Msa1401910 MtrunA17_Chr4g0071411 49.153 118 54 3 67 182 90 203 2.89e-28 105
Msa1401910 MtrunA17_Chr6g0450991 48.352 91 47 0 62 152 64 154 1.91e-19 84.0
Msa1401910 MtrunA17_Chr5g0415941 34.197 193 92 5 4 166 21 208 1.98e-17 79.0
Msa1401910 MtrunA17_Chr8g0362151 35.849 159 93 3 5 159 22 175 4.41e-17 77.4
Msa1401910 MtrunA17_Chr7g0217111 43.750 96 47 1 64 152 79 174 9.63e-17 76.3
Msa1401910 MtrunA17_Chr6g0453021 37.410 139 75 1 14 152 57 183 1.07e-16 76.3
Msa1401910 MtrunA17_Chr5g0416391 43.564 101 57 0 52 152 64 164 2.75e-16 75.5
Msa1401910 MtrunA17_Chr8g0362751 44.792 96 46 1 63 151 87 182 3.62e-16 75.1
Msa1401910 MtrunA17_Chr7g0265521 42.000 100 57 1 54 152 51 150 4.13e-16 73.9
Msa1401910 MtrunA17_Chr3g0119291 38.028 142 73 4 26 152 12 153 1.03e-15 73.6
Msa1401910 MtrunA17_Chr3g0123691 42.202 109 54 3 53 152 46 154 1.45e-15 73.6
Msa1401910 MtrunA17_Chr4g0060031 45.161 93 44 1 65 150 95 187 2.72e-14 70.5
Msa1401910 MtrunA17_Chr1g0179581 44.318 88 48 1 60 147 24 110 4.21e-14 65.9
Msa1401910 MtrunA17_Chr5g0403691 53.731 67 31 0 65 131 53 119 2.29e-13 66.2
Msa1401910 MtrunA17_Chr5g0403701 53.731 67 31 0 65 131 53 119 2.43e-13 66.2
Msa1401910 MtrunA17_Chr8g0381741 45.455 99 51 2 53 150 43 139 3.47e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1401910 AT2G01430.1 65.957 188 49 4 1 184 74 250 6.89e-78 235
Msa1401910 AT1G70920.1 59.474 190 56 5 1 184 1 175 1.12e-57 181
Msa1401910 AT1G70920.2 62.025 158 41 3 33 184 1 145 1.61e-56 177
Msa1401910 AT5G06710.1 49.761 209 86 6 1 205 133 326 3.50e-52 171
Msa1401910 AT4G37790.1 56.489 131 51 1 53 183 114 238 4.45e-47 156
Msa1401910 AT3G60390.1 62.406 133 42 3 52 182 148 274 5.83e-47 157
Msa1401910 AT4G16780.1 61.905 126 43 2 59 184 123 243 1.08e-46 155
Msa1401910 AT2G22800.1 57.895 133 46 2 51 183 103 225 6.32e-46 153
Msa1401910 AT2G44910.1 62.295 122 41 1 64 185 162 278 3.40e-45 152
Msa1401910 AT4G17460.1 58.015 131 50 1 53 183 123 248 1.34e-44 150
Msa1401910 AT5G47370.1 58.647 133 47 2 51 183 119 243 3.24e-44 149
Msa1401910 AT2G01430.2 59.350 123 43 3 1 119 74 193 5.79e-41 139
Msa1401910 AT5G06710.4 48.305 118 50 4 1 116 133 241 7.36e-22 90.5
Msa1401910 AT3G01470.1 47.778 90 47 0 63 152 66 155 8.62e-18 79.7
Msa1401910 AT1G26960.1 40.323 124 68 1 52 175 58 175 1.04e-16 76.6
Msa1401910 AT1G69780.1 43.564 101 57 0 52 152 72 172 2.66e-16 75.9
Msa1401910 AT4G36740.2 42.574 101 58 0 56 156 47 147 1.93e-14 69.7
Msa1401910 AT5G65310.1 46.512 86 46 0 65 150 72 157 1.96e-14 70.9
Msa1401910 AT5G65310.2 46.512 86 46 0 65 150 54 139 2.05e-14 70.9
Msa1401910 AT4G36740.1 42.574 101 58 0 56 156 46 146 2.29e-14 69.3
Msa1401910 AT2G36610.1 40.367 109 56 2 53 153 60 167 3.76e-14 68.2
Msa1401910 AT2G18550.1 42.857 98 56 0 54 151 50 147 5.01e-14 68.6
Msa1401910 AT1G27045.5 52.778 72 34 0 65 136 25 96 9.72e-14 67.0
Msa1401910 AT1G27045.3 52.778 72 34 0 65 136 25 96 9.72e-14 67.0
Msa1401910 AT5G03790.1 42.391 92 53 0 65 156 77 168 1.00e-13 68.2
Msa1401910 AT1G27045.1 45.745 94 44 1 65 151 68 161 1.24e-13 67.8
Msa1401910 AT1G27045.2 52.778 72 34 0 65 136 17 88 1.24e-13 66.6
Msa1401910 AT5G15150.1 45.455 88 48 0 65 152 115 202 1.78e-13 68.2
Msa1401910 AT4G40060.1 45.349 86 47 0 65 150 59 144 3.33e-13 67.4
Msa1401910 AT1G27045.4 52.778 72 34 0 65 136 68 139 3.54e-13 66.6
Msa1401910 AT2G22430.1 46.512 86 46 0 65 150 62 147 5.18e-13 67.0
Msa1401910 AT3G01220.1 34.375 160 84 5 5 143 6 165 6.63e-13 66.2
Msa1401910 AT5G66700.1 47.561 82 41 1 49 130 57 136 1.08e-12 65.1
Msa1401910 AT5G03790.2 35.246 122 77 1 59 178 71 192 2.59e-11 60.8

Find 71 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAAGAAAGCAGCGTTAA+TGG 0.245343 tig0022785:-81534 Msa1401910:CDS
TTCTTGATCTTCTTCTTCTA+TGG 0.256573 tig0022785:-82612 Msa1401910:exon
AAAGAGAAGTTGAGGAGCTT+AGG 0.327770 tig0022785:-77825 Msa1401910:CDS
CAAGAAGATCCTTGATGAAA+AGG 0.362713 tig0022785:+82629 None:intergenic
AGCGACTGTGGCGGTGGTAT+TGG 0.370541 tig0022785:+77702 None:intergenic
AAAGTGAAGAAAACAAATTT+AGG 0.381582 tig0022785:+82663 None:intergenic
GATGAGGGGAGAAAAGAAAT+TGG 0.383567 tig0022785:+82524 None:intergenic
AAGACCCAAACCACCTCTTC+AGG 0.404339 tig0022785:+77872 None:intergenic
GGTGGTGACACGCTCACATC+GGG 0.415895 tig0022785:+77723 None:intergenic
TGCCATCCATTCTTCTTCTA+CGG 0.429731 tig0022785:+81566 None:intergenic
TGAAGCTTTCTTCAAGGAGA+TGG 0.431949 tig0022785:+81469 None:intergenic
AAGAGAAGTTGAGGAGCTTA+GGG 0.432553 tig0022785:-77824 Msa1401910:CDS
CAACTTCTCTTTGTAGCCTC+CGG 0.434325 tig0022785:+77836 None:intergenic
ACAGAAGCAGAAAGAGTGTT+TGG 0.439755 tig0022785:-81259 Msa1401910:intron
ATTGGTGAAGAAGCAAAGCC+TGG 0.448686 tig0022785:+82542 None:intergenic
GAATACCTGAAGAGGTGGTT+TGG 0.451281 tig0022785:-77877 Msa1401910:CDS
GGTCTTTAACTGAACAAAAC+CGG 0.455555 tig0022785:-77855 Msa1401910:CDS
AGAAAACAAATTTAGGAGAA+AGG 0.458069 tig0022785:+82670 None:intergenic
CTTGATGAAAAGGGAGGAAA+AGG 0.462170 tig0022785:+82639 None:intergenic
ACCTACAAGTTCCTCCAGCT+TGG 0.470781 tig0022785:-82582 Msa1401910:CDS
AAGAAGATCCTTGATGAAAA+GGG 0.473088 tig0022785:+82630 None:intergenic
AACCACACCTCCACTTGCCT+TGG 0.476841 tig0022785:+81216 None:intergenic
GAAGCTTTCTTCAAGGAGAT+GGG 0.480176 tig0022785:+81470 None:intergenic
AATACCTGAAGAGGTGGTTT+GGG 0.488971 tig0022785:-77876 Msa1401910:CDS
TTCGGCAGCGACTGTGGCGG+TGG 0.489852 tig0022785:+77696 None:intergenic
CACATTGATAAGGTTGAAGC+TGG 0.491305 tig0022785:+77748 None:intergenic
TGTCATGCTTGTCACACTCT+AGG 0.496223 tig0022785:+77643 None:intergenic
GTCATGCTTGTCACACTCTA+GGG 0.499070 tig0022785:+77644 None:intergenic
ATTCTTCTTCTACGGTTACT+CGG 0.502354 tig0022785:+81574 None:intergenic
TAATTACTGGGTTTAAAGTG+TGG 0.513978 tig0022785:+81439 None:intergenic
GACTGTGGCGGTGGTATTGG+TGG 0.515726 tig0022785:+77705 None:intergenic
TCCAAGCTGGAGGAACTTGT+AGG 0.518571 tig0022785:+82581 None:intergenic
GAGTAACCGTAGAAGAAGAA+TGG 0.519061 tig0022785:-81572 Msa1401910:CDS
GGTTTCAAAACCGTAGGGCC+AGG 0.531848 tig0022785:-81197 Msa1401910:intron
AGCAAAGCCTGGGATAGATA+TGG 0.534631 tig0022785:+82553 None:intergenic
CAAGTTGAAGCAGACAGAGA+TGG 0.539564 tig0022785:-77905 Msa1401910:CDS
GGAGCTTAGGGCTATGAAGA+TGG 0.542259 tig0022785:-77812 Msa1401910:CDS
GATAAGGTTGAAGCTGGAAG+AGG 0.548416 tig0022785:+77754 None:intergenic
GAATTGACCATATCTATCCC+AGG 0.565626 tig0022785:-82560 Msa1401910:CDS
CACTCGTGCACGATCGAGCG+TGG 0.575990 tig0022785:+77597 None:intergenic
AGAATGGATGGCACTAGAAG+AGG 0.577292 tig0022785:-81556 Msa1401910:CDS
TTAGCCTTTACCTGGCCCTA+CGG 0.577524 tig0022785:+81187 None:intergenic
AGATATGGTCAATTCCAAGC+TGG 0.579606 tig0022785:+82568 None:intergenic
ACACCTCCACTTGCCTTGGT+CGG 0.580254 tig0022785:+81220 None:intergenic
GTGCTACTTACCAGATGATG+AGG 0.582615 tig0022785:+82508 None:intergenic
ACATCGGGGACACATTGATA+AGG 0.583310 tig0022785:+77738 None:intergenic
TGCAGCTTAAGCTCCGACCA+AGG 0.586714 tig0022785:-81233 Msa1401910:CDS
GACCAAGGCAAGTGGAGGTG+TGG 0.601638 tig0022785:-81218 Msa1401910:CDS
AACCGTAGAAGAAGAATGGA+TGG 0.604290 tig0022785:-81568 Msa1401910:CDS
TGGTGGTGACACGCTCACAT+CGG 0.609053 tig0022785:+77722 None:intergenic
TGCTACTTACCAGATGATGA+GGG 0.609343 tig0022785:+82509 None:intergenic
TAAGCTCCGACCAAGGCAAG+TGG 0.615426 tig0022785:-81226 Msa1401910:CDS
AGGTGTGGTTTCAAAACCGT+AGG 0.616349 tig0022785:-81203 Msa1401910:CDS
TTGGTGAAGAAGCAAAGCCT+GGG 0.624929 tig0022785:+82543 None:intergenic
CACTCTAGGGGACAAAATGA+CGG 0.630061 tig0022785:+77657 None:intergenic
CAAGAAACTGCGTCTAACAA+AGG 0.630784 tig0022785:-81499 Msa1401910:CDS
GAGGCTACAAAGAGAAGTTG+AGG 0.631401 tig0022785:-77833 Msa1401910:CDS
TGGAGTGCGAATACCTGAAG+AGG 0.632527 tig0022785:-77885 Msa1401910:CDS
TGAGGAGATAACACAGTAGG+TGG 0.632854 tig0022785:+77787 None:intergenic
AAGATCCTTGATGAAAAGGG+AGG 0.635554 tig0022785:+82633 None:intergenic
TATGGTCAATTCCAAGCTGG+AGG 0.639066 tig0022785:+82571 None:intergenic
CTGTGAGGAGATAACACAGT+AGG 0.640869 tig0022785:+77784 None:intergenic
GTTAGACGCAGTTTCTTGCG+AGG 0.647544 tig0022785:+81504 None:intergenic
GGTGTGGTTTCAAAACCGTA+GGG 0.647806 tig0022785:-81202 Msa1401910:CDS
GCTCCGACCAAGGCAAGTGG+AGG 0.651935 tig0022785:-81223 Msa1401910:CDS
TCATGCTTGTCACACTCTAG+GGG 0.663913 tig0022785:+77645 None:intergenic
AGTGCGAATACCTGAAGAGG+TGG 0.667742 tig0022785:-77882 Msa1401910:CDS
GGAAGAGGCTCAGAACTGTG+AGG 0.688248 tig0022785:+77769 None:intergenic
GCTACTTACCAGATGATGAG+GGG 0.700104 tig0022785:+82510 None:intergenic
CTTTAACTGAACAAAACCGG+AGG 0.724376 tig0022785:-77852 Msa1401910:CDS
GTGGTGACACGCTCACATCG+GGG 0.751626 tig0022785:+77724 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAATAATAAATTTAA+GGG + tig0022785:78001-78020 None:intergenic 0.0%
!! TTATAAAAATAATAAATTTA+AGG + tig0022785:78002-78021 None:intergenic 0.0%
!! AATAAAATTAAAACAATGAT+CGG - tig0022785:77937-77956 Msa1401910:intron 10.0%
!! AACAAAAAGTTAATATTAAA+CGG - tig0022785:78020-78039 Msa1401910:intron 10.0%
!! AAAGTAAAAAATTGTATATT+AGG + tig0022785:78147-78166 None:intergenic 10.0%
!! TAAAAAAATGATATATTTGT+CGG - tig0022785:78464-78483 Msa1401910:intron 10.0%
!! TATATTATATATCTAACTTT+AGG + tig0022785:78568-78587 None:intergenic 10.0%
!! AAAAATTCATAATTCTTTAT+AGG + tig0022785:78604-78623 None:intergenic 10.0%
!! AAGAAAATATGAATAAATTA+AGG + tig0022785:78867-78886 None:intergenic 10.0%
!! AATTATATGCATATTAATTA+AGG + tig0022785:78949-78968 None:intergenic 10.0%
!! TTAATTAATATGCATATAAT+TGG - tig0022785:78948-78967 Msa1401910:intron 10.0%
!! ATTAATAATGATAACATTTA+AGG - tig0022785:80364-80383 Msa1401910:intron 10.0%
!!! TTAAAGAAAGAATAATATTT+TGG + tig0022785:81956-81975 None:intergenic 10.0%
!!! TTCATTTATTTTACCATTAT+TGG - tig0022785:77877-77896 Msa1401910:CDS 15.0%
!! TTAAAAAATGAAACCAATAA+TGG + tig0022785:77893-77912 None:intergenic 15.0%
!!! TTGATCTTTATTGTTTTTTT+AGG - tig0022785:78213-78232 Msa1401910:intron 15.0%
!! AAAAAAATGATATATTTGTC+GGG - tig0022785:78465-78484 Msa1401910:intron 15.0%
!!! AAAGAATTATGAATTTTTGT+TGG - tig0022785:78606-78625 Msa1401910:intron 15.0%
!!! AAGAATTATGAATTTTTGTT+GGG - tig0022785:78607-78626 Msa1401910:intron 15.0%
!!! TTTCATATATAGTCTTAATT+AGG + tig0022785:79189-79208 None:intergenic 15.0%
!! TTGTTTAGTAATAAAATGTT+AGG - tig0022785:79337-79356 Msa1401910:intron 15.0%
!!! TCATCTCTTAATTTAATTTT+AGG + tig0022785:79638-79657 None:intergenic 15.0%
!! GAATAATAACAAAGATAATA+TGG + tig0022785:79722-79741 None:intergenic 15.0%
!!! ATAATAATGTTTTTATGAAC+CGG - tig0022785:80268-80287 Msa1401910:intron 15.0%
!!! AATAAATAAGAGTATAATAG+TGG + tig0022785:80521-80540 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + tig0022785:81119-81138 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + tig0022785:81222-81241 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + tig0022785:81246-81265 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - tig0022785:81245-81264 Msa1401910:CDS 15.0%
!!! TACAAATAGAAATTTTATCT+TGG + tig0022785:81419-81438 None:intergenic 15.0%
!! TATTTAACCTATTAATGTAA+GGG + tig0022785:81484-81503 None:intergenic 15.0%
!! ATATTTAACCTATTAATGTA+AGG + tig0022785:81485-81504 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + tig0022785:81119-81138 None:intergenic 15.0%
!! AAATTATCATAATCAACTAT+TGG + tig0022785:81990-82009 None:intergenic 15.0%
!! AATAGTTGATTATGATAATT+TGG - tig0022785:81989-82008 Msa1401910:intron 15.0%
!! AAAGTGAAGAAAACAAATTT+AGG + tig0022785:77579-77598 None:intergenic 20.0%
!! GAAGAAAAAAATAAGTATGT+GGG + tig0022785:78059-78078 None:intergenic 20.0%
!! AGAAGAAAAAAATAAGTATG+TGG + tig0022785:78060-78079 None:intergenic 20.0%
!!! TTATTTTTTTCTTCTTCTTG+AGG - tig0022785:78065-78084 Msa1401910:intron 20.0%
!!! ATTTTACCTATATTTGCTTT+AGG + tig0022785:78116-78135 None:intergenic 20.0%
!! TACAATGACTGAAAAAAATA+AGG + tig0022785:78174-78193 None:intergenic 20.0%
!! TAAATTAAGGTCATGTAAAT+GGG + tig0022785:78854-78873 None:intergenic 20.0%
!! ATAAATTAAGGTCATGTAAA+TGG + tig0022785:78855-78874 None:intergenic 20.0%
!!! TCTTTTCAATTCTTTTTCAT+CGG + tig0022785:79370-79389 None:intergenic 20.0%
!!! TAATAATGTTTTTATGAACC+GGG - tig0022785:80269-80288 Msa1401910:intron 20.0%
!! TAAAATTATGAATATGAACC+CGG + tig0022785:80290-80309 None:intergenic 20.0%
!!! TTGTTTTAACTTCTTTAACT+TGG + tig0022785:80314-80333 None:intergenic 20.0%
!! TCCACTAACTATAATTAATA+AGG - tig0022785:80563-80582 Msa1401910:intron 20.0%
!! CCACTAACTATAATTAATAA+GGG - tig0022785:80564-80583 Msa1401910:intron 20.0%
!! CTTATAATAAAAGCAATGAT+AGG + tig0022785:80993-81012 None:intergenic 20.0%
!!! TTGCTTTTATTATAAGACAA+AGG - tig0022785:80997-81016 Msa1401910:intron 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + tig0022785:81159-81178 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - tig0022785:81236-81255 Msa1401910:CDS 20.0%
!!! ATTTTTTAACCATTAACTTG+AGG - tig0022785:81442-81461 Msa1401910:intron 20.0%
!! TTAATAAAACTCCATAAACA+CGG + tig0022785:81628-81647 None:intergenic 20.0%
!! GTAACATAGTATTAATTGAA+GGG + tig0022785:81926-81945 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG + tig0022785:81927-81946 None:intergenic 20.0%
!!! TAAGCAAATTTTGACTTTTT+AGG + tig0022785:82131-82150 None:intergenic 20.0%
!!! CATTGATTAAAATGATGATA+TGG + tig0022785:82278-82297 None:intergenic 20.0%
!!! TGTACGTTGAATTAATATTT+TGG - tig0022785:82298-82317 Msa1401910:intron 20.0%
! AGAAAACAAATTTAGGAGAA+AGG + tig0022785:77572-77591 None:intergenic 25.0%
! ATAAAAAAACACAACTGTAG+TGG + tig0022785:77978-77997 None:intergenic 25.0%
! TAATATTAAACGGCCTATAA+AGG - tig0022785:78030-78049 Msa1401910:intron 25.0%
! AATATTAAACGGCCTATAAA+GGG - tig0022785:78031-78050 Msa1401910:intron 25.0%
! TAACTTCCTAAAGCAAATAT+AGG - tig0022785:78107-78126 Msa1401910:intron 25.0%
! AAAAAACTTTAGGTACTAGT+TGG + tig0022785:78528-78547 None:intergenic 25.0%
!!! ACCTAAAGTTTTTTTTTGAG+AGG - tig0022785:78534-78553 Msa1401910:intron 25.0%
! TCCTCTCAAAAAAAAACTTT+AGG + tig0022785:78538-78557 None:intergenic 25.0%
!! ATGAATTTTTGTTGGGAAAT+TGG - tig0022785:78614-78633 Msa1401910:intron 25.0%
!! TGAATTTTTGTTGGGAAATT+GGG - tig0022785:78615-78634 Msa1401910:intron 25.0%
!!! ATTTTGGAGGTATAATTACT+GGG + tig0022785:78815-78834 None:intergenic 25.0%
!! TCTTGGTAAAAGAAAGATTT+TGG + tig0022785:78831-78850 None:intergenic 25.0%
! ACAATTAGCTCACTTAATTA+AGG - tig0022785:79214-79233 Msa1401910:intron 25.0%
!! AGTAAGTTGTATGATTTTGA+TGG - tig0022785:79410-79429 Msa1401910:intron 25.0%
! GTTGACATTCTATAACATAA+AGG - tig0022785:79573-79592 Msa1401910:intron 25.0%
!!! ATCTTTGTTATTATTCTCCT+AGG - tig0022785:79726-79745 Msa1401910:intron 25.0%
!!! TCTTTGTTATTATTCTCCTA+GGG - tig0022785:79727-79746 Msa1401910:intron 25.0%
!! AGGTTTATGTTAAGTTTTCA+TGG - tig0022785:79875-79894 Msa1401910:intron 25.0%
!!! AACTTGATTTTGCGTTTTTT+TGG + tig0022785:79905-79924 None:intergenic 25.0%
! GTTCTTGAAAATTGTTTGAT+TGG - tig0022785:80108-80127 Msa1401910:intron 25.0%
! CATTCGTTCTTGAAAATATT+TGG + tig0022785:80163-80182 None:intergenic 25.0%
!!! ATGAGTCAATTTTTGAAGTT+AGG - tig0022785:80180-80199 Msa1401910:intron 25.0%
! ATTAATTATAGTTAGTGGAG+TGG + tig0022785:80562-80581 None:intergenic 25.0%
! CCCTTATTAATTATAGTTAG+TGG + tig0022785:80567-80586 None:intergenic 25.0%
! ACTTTAAACGACTATTATTG+TGG - tig0022785:80659-80678 Msa1401910:intron 25.0%
! ACTTTAAACGACTATTATTG+TGG - tig0022785:80659-80678 Msa1401910:intron 25.0%
!!! TTTTTATGTGTGAAAGTACA+AGG - tig0022785:80942-80961 Msa1401910:intron 25.0%
! AAGACAAAGGAATTACATTA+AGG - tig0022785:81010-81029 Msa1401910:intron 25.0%
! AATGATTAAGAGAAAGAGAA+TGG + tig0022785:81279-81298 None:intergenic 25.0%
! AAGGTGCACTTAATAATTAT+TGG + tig0022785:81683-81702 None:intergenic 25.0%
! CATGATGATTATAAATGCAT+GGG + tig0022785:81735-81754 None:intergenic 25.0%
! TCATGATGATTATAAATGCA+TGG + tig0022785:81736-81755 None:intergenic 25.0%
!!! GTGTAAGTAATCACTTTTTA+TGG + tig0022785:81786-81805 None:intergenic 25.0%
!!! AAACGACACTTATTTTGAAA+CGG + tig0022785:81826-81845 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + tig0022785:82141-82160 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG - tig0022785:82067-82086 Msa1401910:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + tig0022785:82067-82086 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG - tig0022785:82141-82160 Msa1401910:intron 25.0%
AAGAAGATCCTTGATGAAAA+GGG + tig0022785:77612-77631 None:intergenic 30.0%
TTCTTGATCTTCTTCTTCTA+TGG - tig0022785:77627-77646 Msa1401910:three_prime_UTR 30.0%
ATACTAGACAAAGATGCAAA+AGG + tig0022785:77771-77790 None:intergenic 30.0%
CGTGCAAAATTAATTCATGT+AGG + tig0022785:78362-78381 None:intergenic 30.0%
!!! TTTTTCTGAAGCTTTCTTCA+AGG + tig0022785:78779-78798 None:intergenic 30.0%
! TAATTACTGGGTTTAAAGTG+TGG + tig0022785:78803-78822 None:intergenic 30.0%
!! GATTTTGGAGGTATAATTAC+TGG + tig0022785:78816-78835 None:intergenic 30.0%
! TGGTAAAAGAAAGATTTTGG+AGG + tig0022785:78828-78847 None:intergenic 30.0%
TAGAAATATAGCATCTCTCA+TGG + tig0022785:78918-78937 None:intergenic 30.0%
AGTTGGAAGCTAATATATAG+AGG + tig0022785:79079-79098 None:intergenic 30.0%
GCTAAGTTTCAAAATCATCA+TGG - tig0022785:80009-80028 Msa1401910:intron 30.0%
! ATCATGGATTTGTTTGTTGA+AGG - tig0022785:80025-80044 Msa1401910:intron 30.0%
!!! TCAATTTTTGAAGTTAGGCA+AGG - tig0022785:80185-80204 Msa1401910:intron 30.0%
!!! CAATTTTTGAAGTTAGGCAA+GGG - tig0022785:80186-80205 Msa1401910:intron 30.0%
ATAACATTTAAGGAGTTGCA+TGG - tig0022785:80374-80393 Msa1401910:intron 30.0%
! AAGTGATTTTGAGCTAAAGA+AGG - tig0022785:80400-80419 Msa1401910:intron 30.0%
GACGATTATTATGAGATAGA+GGG + tig0022785:80449-80468 None:intergenic 30.0%
AGACGATTATTATGAGATAG+AGG + tig0022785:80450-80469 None:intergenic 30.0%
TAAATATTGCATTGCTAGAC+AGG + tig0022785:80487-80506 None:intergenic 30.0%
ACAAGGATGGTACAAAAAAA+AGG + tig0022785:80704-80723 None:intergenic 30.0%
AGGAATTACATTAAGGAGAA+TGG - tig0022785:81017-81036 Msa1401910:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + tig0022785:81327-81346 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - tig0022785:81328-81347 Msa1401910:intron 30.0%
TTTCTCATTAAACATACCGT+AGG - tig0022785:81529-81548 Msa1401910:CDS 30.0%
! TTGAGTTGTCTACTTTCATT+TGG + tig0022785:81588-81607 None:intergenic 30.0%
GCACTTAATAATTATTGGAG+AGG + tig0022785:81678-81697 None:intergenic 30.0%
ATGATTATAAATGCATGGGT+TGG + tig0022785:81731-81750 None:intergenic 30.0%
!! TTCAAAATGAGTGTTGCTTT+AGG + tig0022785:82220-82239 None:intergenic 30.0%
!! AAGCAACACTCATTTTGAAA+CGG - tig0022785:82221-82240 Msa1401910:intron 30.0%
!! TTAATATTTTGGACACATGC+AGG - tig0022785:82309-82328 Msa1401910:intron 30.0%
! GGCATCAATGACTAATTTTT+CGG + tig0022785:82564-82583 None:intergenic 30.0%
CAAGAAGATCCTTGATGAAA+AGG + tig0022785:77613-77632 None:intergenic 35.0%
AAGACACAAACATGAAGAGA+GGG + tig0022785:77830-77849 None:intergenic 35.0%
AAAGACACAAACATGAAGAG+AGG + tig0022785:77831-77850 None:intergenic 35.0%
ATTCTTCTTCTACGGTTACT+CGG + tig0022785:78668-78687 None:intergenic 35.0%
ACACATATTGAAGTCGATTG+AGG + tig0022785:79118-79137 None:intergenic 35.0%
ACAAAGATAATATGGCGAAG+AGG + tig0022785:79714-79733 None:intergenic 35.0%
TATTATTCTCCTAGGGTTTG+CGG - tig0022785:79734-79753 Msa1401910:intron 35.0%
!! TTGCGGAGTGTTATCTATTT+TGG - tig0022785:79751-79770 Msa1401910:intron 35.0%
!! TGCGGAGTGTTATCTATTTT+GGG - tig0022785:79752-79771 Msa1401910:intron 35.0%
ACATAAACCTTGCCATATGT+AGG + tig0022785:79865-79884 None:intergenic 35.0%
TTTCAAGAACATGAACAGCT+AGG + tig0022785:80098-80117 None:intergenic 35.0%
ATGGGAATGTTCTCTTAGAT+AGG - tig0022785:80219-80238 Msa1401910:intron 35.0%
TGCAAGGATGGTACAATAAA+AGG + tig0022785:80842-80861 None:intergenic 35.0%
ATCCTTAATCATTGCCATTG+GGG + tig0022785:81052-81071 None:intergenic 35.0%
GATCCTTAATCATTGCCATT+GGG + tig0022785:81053-81072 None:intergenic 35.0%
!!! GACACTCATTTTGAAACAGA+GGG + tig0022785:81089-81108 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + tig0022785:81193-81212 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + tig0022785:81197-81216 None:intergenic 35.0%
AAACAGTGTCCTCAAGTTAA+TGG + tig0022785:81454-81473 None:intergenic 35.0%
AGCAAGACCCTTACATTAAT+AGG - tig0022785:81474-81493 Msa1401910:CDS 35.0%
GAAACGGAGTGAGTATTATT+GGG + tig0022785:81810-81829 None:intergenic 35.0%
TGAAACGGAGTGAGTATTAT+TGG + tig0022785:81811-81830 None:intergenic 35.0%
AGGCAATTGCACATAGATTA+AGG + tig0022785:82200-82219 None:intergenic 35.0%
GGTCTTTAACTGAACAAAAC+CGG - tig0022785:82384-82403 Msa1401910:intron 35.0%
CTTGATGAAAAGGGAGGAAA+AGG + tig0022785:77603-77622 None:intergenic 40.0%
! CTTTTCCTCCCTTTTCATCA+AGG - tig0022785:77601-77620 Msa1401910:three_prime_UTR 40.0%
AAGATCCTTGATGAAAAGGG+AGG + tig0022785:77609-77628 None:intergenic 40.0%
AGATATGGTCAATTCCAAGC+TGG + tig0022785:77674-77693 None:intergenic 40.0%
GAATTGACCATATCTATCCC+AGG - tig0022785:77679-77698 Msa1401910:CDS 40.0%
GATGAGGGGAGAAAAGAAAT+TGG + tig0022785:77718-77737 None:intergenic 40.0%
! TGCTACTTACCAGATGATGA+GGG + tig0022785:77733-77752 None:intergenic 40.0%
AGTATGTGGGAACCCTTTAT+AGG + tig0022785:78046-78065 None:intergenic 40.0%
! GGGTGTTACAGTGAAAAAGT+TGG - tig0022785:78635-78654 Msa1401910:intron 40.0%
GAGTAACCGTAGAAGAAGAA+TGG - tig0022785:78667-78686 Msa1401910:intron 40.0%
AACCGTAGAAGAAGAATGGA+TGG - tig0022785:78671-78690 Msa1401910:intron 40.0%
TGCCATCCATTCTTCTTCTA+CGG + tig0022785:78676-78695 None:intergenic 40.0%
GAAGAAGAAAGCAGCGTTAA+TGG - tig0022785:78705-78724 Msa1401910:intron 40.0%
CAAGAAACTGCGTCTAACAA+AGG - tig0022785:78740-78759 Msa1401910:intron 40.0%
GAAGCTTTCTTCAAGGAGAT+GGG + tig0022785:78772-78791 None:intergenic 40.0%
TGAAGCTTTCTTCAAGGAGA+TGG + tig0022785:78773-78792 None:intergenic 40.0%
AAGGTCATGTAAATGGGTCT+TGG + tig0022785:78848-78867 None:intergenic 40.0%
TATAGCATCTCTCATGGACA+TGG + tig0022785:78912-78931 None:intergenic 40.0%
!! ACAGAAGCAGAAAGAGTGTT+TGG - tig0022785:78980-78999 Msa1401910:intron 40.0%
!! ATAGAGGATTAGCCTTTACC+TGG + tig0022785:79063-79082 None:intergenic 40.0%
GATCAGTCATGATGAGAAGT+TGG + tig0022785:79096-79115 None:intergenic 40.0%
! ATGGCTATGTTTTCCTGGTT+TGG - tig0022785:79827-79846 Msa1401910:intron 40.0%
! TCAAGTTGCAAACCCTAATC+TGG - tig0022785:79918-79937 Msa1401910:intron 40.0%
TGAAGGTTTGACCATTGATG+AGG - tig0022785:80042-80061 Msa1401910:intron 40.0%
GTTATCTGATTCCAAGTCGA+TGG + tig0022785:80076-80095 None:intergenic 40.0%
GAGAGAGTCAGAAACAAAGT+TGG - tig0022785:80750-80769 Msa1401910:intron 40.0%
TACAAGGAATGTATGCCACA+TGG - tig0022785:80958-80977 Msa1401910:intron 40.0%
ACAAGGAATGTATGCCACAT+GGG - tig0022785:80959-80978 Msa1401910:intron 40.0%
CATTAAGGAGAATGGTAACC+AGG - tig0022785:81025-81044 Msa1401910:intron 40.0%
GGATCCTTAATCATTGCCAT+TGG + tig0022785:81054-81073 None:intergenic 40.0%
!!! AACAGAGGGAGTACTTGTTT+TGG + tig0022785:81075-81094 None:intergenic 40.0%
!!! CGACACTCATTTTGAAACAG+AGG + tig0022785:81090-81109 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + tig0022785:81194-81213 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - tig0022785:81332-81351 Msa1401910:intron 40.0%
TTTATCCCACAGCAATCCTA+CGG + tig0022785:81548-81567 None:intergenic 40.0%
AAACTCCATAAACACGGACA+CGG + tig0022785:81622-81641 None:intergenic 40.0%
! GTCTAAAGCATGAAATCGAG+TGG + tig0022785:81709-81728 None:intergenic 40.0%
GGTAAAATTACTACTCCCTC+CGG - tig0022785:82010-82029 Msa1401910:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + tig0022785:82145-82164 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + tig0022785:82144-82163 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - tig0022785:82144-82163 Msa1401910:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - tig0022785:82145-82164 Msa1401910:intron 40.0%
AATACCTGAAGAGGTGGTTT+GGG - tig0022785:82363-82382 Msa1401910:intron 40.0%
CTTTAACTGAACAAAACCGG+AGG - tig0022785:82387-82406 Msa1401910:intron 40.0%
AAAGAGAAGTTGAGGAGCTT+AGG - tig0022785:82414-82433 Msa1401910:intron 40.0%
AAGAGAAGTTGAGGAGCTTA+GGG - tig0022785:82415-82434 Msa1401910:intron 40.0%
CACATTGATAAGGTTGAAGC+TGG + tig0022785:82494-82513 None:intergenic 40.0%
TATGGTCAATTCCAAGCTGG+AGG + tig0022785:77671-77690 None:intergenic 45.0%
AGCAAAGCCTGGGATAGATA+TGG + tig0022785:77689-77708 None:intergenic 45.0%
TTGGTGAAGAAGCAAAGCCT+GGG + tig0022785:77699-77718 None:intergenic 45.0%
ATTGGTGAAGAAGCAAAGCC+TGG + tig0022785:77700-77719 None:intergenic 45.0%
! TCTTTTCTCCCCTCATCATC+TGG - tig0022785:77721-77740 Msa1401910:CDS 45.0%
GCTACTTACCAGATGATGAG+GGG + tig0022785:77732-77751 None:intergenic 45.0%
!! GTGCTACTTACCAGATGATG+AGG + tig0022785:77734-77753 None:intergenic 45.0%
AGAATGGATGGCACTAGAAG+AGG - tig0022785:78683-78702 Msa1401910:intron 45.0%
AGGTGTGGTTTCAAAACCGT+AGG - tig0022785:79036-79055 Msa1401910:intron 45.0%
GGTGTGGTTTCAAAACCGTA+GGG - tig0022785:79037-79056 Msa1401910:intron 45.0%
TTTGGGTCGTCGTGTTCAAT+TGG - tig0022785:79769-79788 Msa1401910:intron 45.0%
TTGGGTCGTCGTGTTCAATT+GGG - tig0022785:79770-79789 Msa1401910:intron 45.0%
AAGACACACGCTACTCACAA+GGG + tig0022785:79805-79824 None:intergenic 45.0%
! CTTGCATGGCTATGTTTTCC+TGG - tig0022785:79822-79841 Msa1401910:intron 45.0%
CGTATGCATCAGCCTACATA+TGG - tig0022785:79850-79869 Msa1401910:intron 45.0%
!! GTGGTGCTTTGGGAATGATT+CGG + tig0022785:79953-79972 None:intergenic 45.0%
TTTGCAAAGCGTGGTGCTTT+GGG + tig0022785:79963-79982 None:intergenic 45.0%
TCAGAAAGCTTTGCAAAGCG+TGG + tig0022785:79972-79991 None:intergenic 45.0%
AGGTTTGACCATTGATGAGG+AGG - tig0022785:80045-80064 Msa1401910:intron 45.0%
TGGTCAAACCTCCTCATCAA+TGG + tig0022785:80056-80075 None:intergenic 45.0%
AGGCAAGGGTTTGACATTCA+TGG - tig0022785:80200-80219 Msa1401910:intron 45.0%
GGCAAGGGTTTGACATTCAT+GGG - tig0022785:80201-80220 Msa1401910:intron 45.0%
TCTTCTCCCTAGTGTCACAT+GGG + tig0022785:80732-80751 None:intergenic 45.0%
GAGAGAGTCAGAGACAAAGT+TGG - tig0022785:80887-80906 Msa1401910:intron 45.0%
!! AGACAAAGTTGGTGAGTGTG+TGG - tig0022785:80898-80917 Msa1401910:intron 45.0%
!! GACAAAGTTGGTGAGTGTGT+GGG - tig0022785:80899-80918 Msa1401910:intron 45.0%
!! ACAAAGTTGGTGAGTGTGTG+GGG - tig0022785:80763-80782 Msa1401910:intron 45.0%
AAAAATGACACGTGACGACG+TGG + tig0022785:80927-80946 None:intergenic 45.0%
CAAGGAATGTATGCCACATG+GGG - tig0022785:80960-80979 Msa1401910:intron 45.0%
GACCCCAATGGCAATGATTA+AGG - tig0022785:81047-81066 Msa1401910:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - tig0022785:81331-81350 Msa1401910:intron 45.0%
AACATACCGTAGGATTGCTG+TGG - tig0022785:81539-81558 Msa1401910:CDS 45.0%
ACATACCGTAGGATTGCTGT+GGG - tig0022785:81540-81559 Msa1401910:CDS 45.0%
GCATGAAATCGAGTGGTCAA+AGG + tig0022785:81702-81721 None:intergenic 45.0%
GTCAAATGTCATACTCCCTC+CGG + tig0022785:82163-82182 None:intergenic 45.0%
! CAAGTTGAAGCAGACAGAGA+TGG - tig0022785:82334-82353 Msa1401910:intron 45.0%
GAATACCTGAAGAGGTGGTT+TGG - tig0022785:82362-82381 Msa1401910:intron 45.0%
CAACTTCTCTTTGTAGCCTC+CGG + tig0022785:82406-82425 None:intergenic 45.0%
GAGGCTACAAAGAGAAGTTG+AGG - tig0022785:82406-82425 Msa1401910:intron 45.0%
TGAGGAGATAACACAGTAGG+TGG + tig0022785:82455-82474 None:intergenic 45.0%
CTGTGAGGAGATAACACAGT+AGG + tig0022785:82458-82477 None:intergenic 45.0%
GATAAGGTTGAAGCTGGAAG+AGG + tig0022785:82488-82507 None:intergenic 45.0%
ACATCGGGGACACATTGATA+AGG + tig0022785:82504-82523 None:intergenic 45.0%
!! TAATTTTTCGGCAGCGACTG+TGG + tig0022785:82552-82571 None:intergenic 45.0%
! CACTCTAGGGGACAAAATGA+CGG + tig0022785:82585-82604 None:intergenic 45.0%
TCATGCTTGTCACACTCTAG+GGG + tig0022785:82597-82616 None:intergenic 45.0%
GTCATGCTTGTCACACTCTA+GGG + tig0022785:82598-82617 None:intergenic 45.0%
TGTCATGCTTGTCACACTCT+AGG + tig0022785:82599-82618 None:intergenic 45.0%
!!! AAAAAAAAAATCAAAATTTT+GGG + tig0022785:79535-79554 None:intergenic 5.0%
!!! TAAAAAAAAAATCAAAATTT+TGG + tig0022785:79536-79555 None:intergenic 5.0%
ACCTACAAGTTCCTCCAGCT+TGG - tig0022785:77657-77676 Msa1401910:CDS 50.0%
TCCAAGCTGGAGGAACTTGT+AGG + tig0022785:77661-77680 None:intergenic 50.0%
GTTAGACGCAGTTTCTTGCG+AGG + tig0022785:78738-78757 None:intergenic 50.0%
AAAACCGTAGGGCCAGGTAA+AGG - tig0022785:79048-79067 Msa1401910:intron 50.0%
! TTAGCCTTTACCTGGCCCTA+CGG + tig0022785:79055-79074 None:intergenic 50.0%
GATAACACTCCGCAAACCCT+AGG + tig0022785:79746-79765 None:intergenic 50.0%
CAAGACACACGCTACTCACA+AGG + tig0022785:79806-79825 None:intergenic 50.0%
TGAGTAGCGTGTGTCTTGCA+TGG - tig0022785:79808-79827 Msa1401910:intron 50.0%
GCATCAGCCTACATATGGCA+AGG - tig0022785:79855-79874 Msa1401910:intron 50.0%
CGGAATGCGCATCCAGATTA+GGG + tig0022785:79933-79952 None:intergenic 50.0%
TCGGAATGCGCATCCAGATT+AGG + tig0022785:79934-79953 None:intergenic 50.0%
CTTTGCAAAGCGTGGTGCTT+TGG + tig0022785:79964-79983 None:intergenic 50.0%
! AGGAGGTTTGACCATCGACT+TGG - tig0022785:80062-80081 Msa1401910:intron 50.0%
TACACCCCCATGTGACACTA+GGG - tig0022785:80723-80742 Msa1401910:intron 50.0%
TTCTCCCTAGTGTCACATGG+GGG + tig0022785:80730-80749 None:intergenic 50.0%
CTTCTCCCTAGTGTCACATG+GGG + tig0022785:80731-80750 None:intergenic 50.0%
CTCTTCTCCCTAGTGTCACA+TGG + tig0022785:80733-80752 None:intergenic 50.0%
TCTTCTCCCTAGTGCCACAT+GGG + tig0022785:80869-80888 None:intergenic 50.0%
AATGGTAACCAGGACCCCAA+TGG - tig0022785:81035-81054 Msa1401910:intron 50.0%
AATCATTGCCATTGGGGTCC+TGG + tig0022785:81046-81065 None:intergenic 50.0%
TCAGTGTAGTGTAGCACACG+AGG + tig0022785:81652-81671 None:intergenic 50.0%
TGGAGTGCGAATACCTGAAG+AGG - tig0022785:82354-82373 Msa1401910:intron 50.0%
AGTGCGAATACCTGAAGAGG+TGG - tig0022785:82357-82376 Msa1401910:intron 50.0%
AAGACCCAAACCACCTCTTC+AGG + tig0022785:82370-82389 None:intergenic 50.0%
GGAGCTTAGGGCTATGAAGA+TGG - tig0022785:82427-82446 Msa1401910:intron 50.0%
TGCAGCTTAAGCTCCGACCA+AGG - tig0022785:79006-79025 Msa1401910:intron 55.0%
TAAGCTCCGACCAAGGCAAG+TGG - tig0022785:79013-79032 Msa1401910:intron 55.0%
ACACCTCCACTTGCCTTGGT+CGG + tig0022785:79022-79041 None:intergenic 55.0%
AACCACACCTCCACTTGCCT+TGG + tig0022785:79026-79045 None:intergenic 55.0%
GGTTTCAAAACCGTAGGGCC+AGG - tig0022785:79042-79061 Msa1401910:intron 55.0%
GCTGATGCATACGCCAAACC+AGG + tig0022785:79843-79862 None:intergenic 55.0%
! CACATGGGGGTGTACAAGGA+TGG + tig0022785:80717-80736 None:intergenic 55.0%
! GTGTCACATGGGGGTGTACA+AGG + tig0022785:80721-80740 None:intergenic 55.0%
GTACACCCCCATGTGACACT+AGG - tig0022785:80722-80741 Msa1401910:intron 55.0%
TTCTCCCTAGTGCCACATGG+GGG + tig0022785:80867-80886 None:intergenic 55.0%
CTTCTCCCTAGTGCCACATG+GGG + tig0022785:80868-80887 None:intergenic 55.0%
CTCTTCTCCCTAGTGCCACA+TGG + tig0022785:80870-80889 None:intergenic 55.0%
GGAATGTATGCCACATGGGG+TGG - tig0022785:80963-80982 Msa1401910:intron 55.0%
! GATAGGTTGACCACCCCATG+TGG + tig0022785:80976-80995 None:intergenic 55.0%
! TAAACACGGACACGGTGCTG+TGG + tig0022785:81614-81633 None:intergenic 55.0%
CAGCACCGTGTCCGTGTTTA+TGG - tig0022785:81614-81633 Msa1401910:intron 55.0%
GGAAGAGGCTCAGAACTGTG+AGG + tig0022785:82473-82492 None:intergenic 55.0%
! TGGTGGTGACACGCTCACAT+CGG + tig0022785:82520-82539 None:intergenic 55.0%
!! TTTTTCGGCAGCGACTGTGG+CGG + tig0022785:82549-82568 None:intergenic 55.0%
GACCAAGGCAAGTGGAGGTG+TGG - tig0022785:79021-79040 Msa1401910:intron 60.0%
! CACATGGGGGTGTGCAAGGA+TGG + tig0022785:80854-80873 None:intergenic 60.0%
CATCCTTGCACACCCCCATG+TGG - tig0022785:80852-80871 Msa1401910:intron 60.0%
CACACCCCCATGTGGCACTA+GGG - tig0022785:80860-80879 Msa1401910:intron 60.0%
GTGGTGACACGCTCACATCG+GGG + tig0022785:82518-82537 None:intergenic 60.0%
GGTGGTGACACGCTCACATC+GGG + tig0022785:82519-82538 None:intergenic 60.0%
! GACTGTGGCGGTGGTATTGG+TGG + tig0022785:82537-82556 None:intergenic 60.0%
AGCGACTGTGGCGGTGGTAT+TGG + tig0022785:82540-82559 None:intergenic 60.0%
GCTCCGACCAAGGCAAGTGG+AGG - tig0022785:79016-79035 Msa1401910:intron 65.0%
! GTGCCACATGGGGGTGTGCA+AGG + tig0022785:80858-80877 None:intergenic 65.0%
GCACACCCCCATGTGGCACT+AGG - tig0022785:80859-80878 Msa1401910:intron 65.0%
CACTCGTGCACGATCGAGCG+TGG + tig0022785:82645-82664 None:intergenic 65.0%
TTCGGCAGCGACTGTGGCGG+TGG + tig0022785:82546-82565 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0022785 gene 77538 82723 77538 ID=Msa1401910;Name=Msa1401910
tig0022785 mRNA 77538 82723 77538 ID=Msa1401910-mRNA-1;Parent=Msa1401910;Name=Msa1401910-mRNA-1;_AED=0.16;_eAED=0.16;_QI=108|1|1|1|1|1|4|116|207
tig0022785 exon 77538 77930 77538 ID=Msa1401910-mRNA-1:exon:18649;Parent=Msa1401910-mRNA-1
tig0022785 exon 81198 81277 81198 ID=Msa1401910-mRNA-1:exon:18648;Parent=Msa1401910-mRNA-1
tig0022785 exon 81446 81615 81446 ID=Msa1401910-mRNA-1:exon:18647;Parent=Msa1401910-mRNA-1
tig0022785 exon 82519 82723 82519 ID=Msa1401910-mRNA-1:exon:18646;Parent=Msa1401910-mRNA-1
tig0022785 five_prime_UTR 82616 82723 82616 ID=Msa1401910-mRNA-1:five_prime_utr;Parent=Msa1401910-mRNA-1
tig0022785 CDS 82519 82615 82519 ID=Msa1401910-mRNA-1:cds;Parent=Msa1401910-mRNA-1
tig0022785 CDS 81446 81615 81446 ID=Msa1401910-mRNA-1:cds;Parent=Msa1401910-mRNA-1
tig0022785 CDS 81198 81277 81198 ID=Msa1401910-mRNA-1:cds;Parent=Msa1401910-mRNA-1
tig0022785 CDS 77654 77930 77654 ID=Msa1401910-mRNA-1:cds;Parent=Msa1401910-mRNA-1
tig0022785 three_prime_UTR 77538 77653 77538 ID=Msa1401910-mRNA-1:three_prime_utr;Parent=Msa1401910-mRNA-1
Gene Sequence

>Msa1401910

ATGGCAGTTTTACCTACAAGTTCCTCCAGCTTGGAATTGACCATATCTATCCCAGGCTTTGCTTCTTCACCAATTTCTTTTCTCCCCTCATCATCTGTGAAAAAGTTGGATGTGAACCGAGTAACCGTAGAAGAAGAATGGATGGCACTAGAAGAGGAAGAAGAAAGCAGCGTTAATGGAGACACTCCTCGCAAGAAACTGCGTCTAACAAAGGAACAGTCCCATCTCCTTGAAGAAAGCTTCAGAAAAAACCACACTTTAAACCCAAAGCAGAAAGAGTGTTTGGCAATGCAGCTTAAGCTCCGACCAAGGCAAGTGGAGGTGTGGTTTCAAAACCGTAGGGCCAGGAGCAAGTTGAAGCAGACAGAGATGGAGTGCGAATACCTGAAGAGGTGGTTTGGGTCTTTAACTGAACAAAACCGGAGGCTACAAAGAGAAGTTGAGGAGCTTAGGGCTATGAAGATGGATCCACCTACTGTGTTATCTCCTCACAGTTCTGAGCCTCTTCCAGCTTCAACCTTATCAATGTGTCCCCGATGTGAGCGTGTCACCACCAATACCACCGCCACAGTCGCTGCCGAAAAATTAGTCATTGATGCCGTCATTTTGTCCCCTAGAGTGTGA

Protein sequence

>Msa1401910

MAVLPTSSSSLELTISIPGFASSPISFLPSSSVKKLDVNRVTVEEEWMALEEEEESSVNGDTPRKKLRLTKEQSHLLEESFRKNHTLNPKQKECLAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKMDPPTVLSPHSSEPLPASTLSMCPRCERVTTNTTATVAAEKLVIDAVILSPRV*