AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1103110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103110 MtrunA17_Chr7g0233051 98.567 349 5 0 1 349 88 436 0.0 709
Msa1103110 MtrunA17_Chr2g0316271 28.387 310 195 5 49 341 62 361 1.01e-32 128
Msa1103110 MtrunA17_Chr8g0342681 28.387 310 195 5 49 341 62 361 1.06e-32 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103110 AT1G80770.1 71.429 343 98 0 1 343 99 441 0.0 520
Msa1103110 AT1G80770.3 71.429 343 98 0 1 343 76 418 0.0 519
Msa1103110 AT1G80770.6 71.429 343 98 0 1 343 130 472 0.0 519
Msa1103110 AT1G80770.2 71.848 341 96 0 1 341 3 343 0.0 518
Msa1103110 AT1G80770.4 71.429 343 98 0 1 343 83 425 0.0 518
Msa1103110 AT1G80770.5 71.429 343 98 0 1 343 114 456 0.0 517
Msa1103110 AT1G50920.1 28.620 297 191 4 49 333 62 349 2.83e-33 130
Msa1103110 AT1G10300.3 28.671 286 183 5 49 322 91 367 4.77e-31 124
Msa1103110 AT1G10300.1 28.671 286 183 5 49 322 91 367 4.77e-31 124
Msa1103110 AT1G10300.2 28.671 286 183 5 49 322 62 338 7.33e-31 123

Find 114 sgRNAs with CRISPR-Local

Find 544 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGATGACAGAAATAATT+TGG 0.178593 7_3:+38193167 Msa1103110:intron
TTGTATGTTCACGACCTTTC+AGG 0.198145 7_3:+38193234 Msa1103110:CDS
GGCAATGCCTGTAATAAATT+TGG 0.207955 7_3:+38191051 Msa1103110:CDS
AAAGGTTTGATGGACATTTA+TGG 0.216829 7_3:+38195602 Msa1103110:CDS
TTTCAAGTCCATCTGGTATT+TGG 0.220766 7_3:+38197045 Msa1103110:three_prime_UTR
AAGAAGATTTGCCTACATTA+GGG 0.265283 7_3:-38191102 None:intergenic
TCATGTCTCTTCAGCAGGCC+TGG 0.268893 7_3:-38192358 None:intergenic
CATGTTAACATTCAAATTGT+AGG 0.271520 7_3:+38189436 Msa1103110:five_prime_UTR
GATGCCATCTATTGACATTC+TGG 0.289556 7_3:+38189514 Msa1103110:exon
CACAACAAGAGGAATTCTTA+TGG 0.298220 7_3:+38192194 Msa1103110:CDS
AAAATAATTGAAGAGAGTTT+TGG 0.305605 7_3:+38190788 Msa1103110:CDS
TAATGTAGGCAAATCTTCTT+TGG 0.307226 7_3:+38191105 Msa1103110:CDS
GGTGTTTCCAAATTTATTAC+AGG 0.308018 7_3:-38191058 None:intergenic
TTCTTAAAGATGGTCCAATA+TGG 0.318804 7_3:-38196995 None:intergenic
GTTGCTTGCATCTTTGATCT+TGG 0.335024 7_3:-38196691 None:intergenic
TCTGGGGTCAGCACTGAAAA+AGG 0.336487 7_3:+38189532 Msa1103110:CDS
CTCCATCGGGACCTGATTTA+CGG 0.346680 7_3:-38195720 None:intergenic
TGTATCTTAAATCCATTGTT+AGG 0.349941 7_3:+38197102 Msa1103110:three_prime_UTR
AAAGAAGATTTGCCTACATT+AGG 0.357301 7_3:-38191103 None:intergenic
TACAATGCCTAATTCCTTGC+TGG 0.364098 7_3:-38196882 None:intergenic
CATGTCTCTTCAGCAGGCCT+GGG 0.368844 7_3:-38192357 None:intergenic
ACTAATGTCATAAGGAGTTA+AGG 0.376412 7_3:-38197200 None:intergenic
ACAGATTCAAATGTTCTAGA+TGG 0.381437 7_3:-38189464 Msa1103100:intron
TTGATGGAGTGGAGGGGTTA+AGG 0.387463 7_3:-38197223 None:intergenic
ACAACAAGAGGAATTCTTAT+GGG 0.393660 7_3:+38192195 Msa1103110:CDS
GAAATCAAAGAAAGGTTTGA+TGG 0.401199 7_3:+38195592 Msa1103110:CDS
CATTTCTTGTTTCTTAAAGA+TGG 0.406490 7_3:-38197005 None:intergenic
AGGTTGATGGTTTGAGGAAG+AGG 0.408783 7_3:+38190174 Msa1103110:CDS
ATTACTGCCAGCAAGGAATT+AGG 0.417903 7_3:+38196875 Msa1103110:three_prime_UTR
TCAATAGATGGCATCACTAT+AGG 0.418432 7_3:-38189506 Msa1103100:intron
TTGGTCCATGTACTCTCTAC+TGG 0.422115 7_3:+38191124 Msa1103110:CDS
ACACCAACTCTCTGCCTTGT+TGG 0.428074 7_3:+38191076 Msa1103110:CDS
CGTCCTCAACAGATCAGCTT+TGG 0.434760 7_3:-38195638 None:intergenic
TGGGACCTCACCTTCTGATC+AGG 0.436948 7_3:+38193263 Msa1103110:CDS
CTGGAGAAGTACCGTAAATC+AGG 0.439528 7_3:+38195709 Msa1103110:CDS
TCTAGAACATTTGAATCTGT+TGG 0.443912 7_3:+38189467 Msa1103110:five_prime_UTR
GACCCCAGAATGTCAATAGA+TGG 0.446247 7_3:-38189518 Msa1103100:intron
ATGCCATCTATTGACATTCT+GGG 0.451951 7_3:+38189515 Msa1103110:CDS
CTAATGTCATAAGGAGTTAA+GGG 0.456431 7_3:-38197199 None:intergenic
AGGAAGAGGGTAGTATCTGT+TGG 0.458638 7_3:+38190188 Msa1103110:CDS
CAGGTGCTAGGGCAGGTTGA+TGG 0.458761 7_3:+38190161 Msa1103110:intron
TCTGTGGTCCGCATCCAAAC+AGG 0.462288 7_3:+38196824 Msa1103110:three_prime_UTR
TGTATGTTCACGACCTTTCA+GGG 0.467049 7_3:+38193235 Msa1103110:CDS
TCTCTTATTGAGCTGACGCT+TGG 0.470519 7_3:+38189927 Msa1103110:CDS
AAAATTGTTCAACAGGTGCT+AGG 0.470751 7_3:+38190149 Msa1103110:intron
GACTGCCTTTCAAGTCCATC+TGG 0.476329 7_3:+38197038 Msa1103110:three_prime_UTR
TAGGGCAGGTTGATGGTTTG+AGG 0.478071 7_3:+38190168 Msa1103110:CDS
TACCGTCATGTCTCTTCAGC+AGG 0.493865 7_3:-38192363 None:intergenic
TCAATAAGAGACCTTTCATA+AGG 0.495639 7_3:-38189915 None:intergenic
TTCTCCACATATGTCCTCAA+TGG 0.504872 7_3:-38189867 Msa1103100:intron
GGTTGATGGTTTGAGGAAGA+GGG 0.506701 7_3:+38190175 Msa1103110:CDS
TGATCTCACACAGCATGAGC+TGG 0.510177 7_3:+38195690 Msa1103110:CDS
TGTTCAACAGGTGCTAGGGC+AGG 0.514072 7_3:+38190154 Msa1103110:intron
ACATGCTTCACTTTGTGCTA+AGG 0.514988 7_3:+38190217 Msa1103110:CDS
ATTCCTTGCTGGCAGTAATG+AGG 0.515158 7_3:-38196871 None:intergenic
TCAATACTTGATGGAGTGGA+GGG 0.515935 7_3:-38197230 None:intergenic
CACGACCTTTCAGGGGAATG+TGG 0.520127 7_3:+38193243 Msa1103110:CDS
AAGAATTCCTCTTGTTGTGA+AGG 0.524407 7_3:-38192190 None:intergenic
AACTATCCCTTCACAACAAG+AGG 0.525070 7_3:+38192183 Msa1103110:CDS
GGTTAAGGACTAATGTCATA+AGG 0.531792 7_3:-38197208 None:intergenic
AGATACATTAATAGCTCCAT+CGG 0.535793 7_3:-38195734 None:intergenic
ATTGAGCTGACGCTTGGAGA+TGG 0.540521 7_3:+38189933 Msa1103110:CDS
TTTGACAAAACGAGAGGCAG+AGG 0.544129 7_3:+38190669 Msa1103110:CDS
AGGAGGATATCTGCAACAAA+AGG 0.546311 7_3:+38189557 Msa1103110:CDS
GCTTGCCAGTAGAGAGTACA+TGG 0.547980 7_3:-38191129 None:intergenic
AGAATTCCTCTTGTTGTGAA+GGG 0.550811 7_3:-38192189 None:intergenic
TGGAGATGGATACTATGAAA+AGG 0.553879 7_3:+38189947 Msa1103110:CDS
TGTTAACCTGAAACTTCTGA+TGG 0.556557 7_3:-38192233 None:intergenic
GAGGGTAGTATCTGTTGGAA+AGG 0.557463 7_3:+38190193 Msa1103110:CDS
CTTGTTGGAGCCCCTAATGT+AGG 0.557585 7_3:+38191091 Msa1103110:CDS
GAATGTTAACATGAGAATGC+TGG 0.557619 7_3:-38189426 Msa1103100:intron
TATACAAAGAAATCAAAGAA+AGG 0.558797 7_3:+38195584 Msa1103110:CDS
ATCAATACTTGATGGAGTGG+AGG 0.565120 7_3:-38197231 None:intergenic
AAATTGTTCAACAGGTGCTA+GGG 0.565816 7_3:+38190150 Msa1103110:intron
TCTCCAAAGCTGATCTGTTG+AGG 0.565988 7_3:+38195635 Msa1103110:CDS
AGGAACTTGCTGTTCCATTG+AGG 0.565996 7_3:+38189853 Msa1103110:intron
GAGACCTTTCATAAGGATGA+AGG 0.566289 7_3:-38189908 None:intergenic
TCTTCTGTTGCATATATCAC+AGG 0.570734 7_3:-38195664 None:intergenic
AAGCCTCATTACTGCCAGCA+AGG 0.574593 7_3:+38196868 Msa1103110:three_prime_UTR
CACACCTTCATCCTTATGAA+AGG 0.582707 7_3:+38189904 Msa1103110:CDS
TGAGCTTCTCAATTTGCAGA+TGG 0.584334 7_3:+38196668 Msa1103110:CDS
AGGTCCCACATTCCCCTGAA+AGG 0.587812 7_3:-38193248 None:intergenic
TACCGTAAATCAGGTCCCGA+TGG 0.588439 7_3:+38195718 Msa1103110:CDS
TAGAAGCACACCTGATCAGA+AGG 0.592069 7_3:-38193273 None:intergenic
CTACATTAGGGGCTCCAACA+AGG 0.592367 7_3:-38191090 None:intergenic
ACGACCTTTCAGGGGAATGT+GGG 0.594559 7_3:+38193244 Msa1103110:CDS
TGAACATACAAAACTGCTGT+TGG 0.598167 7_3:-38193222 None:intergenic
GATAAATGTTTCAGACTCTG+AGG 0.603580 7_3:+38191029 Msa1103110:intron
ATTAAATGCCAAATACCAGA+TGG 0.604819 7_3:-38197053 None:intergenic
AGAAGATTTGCCTACATTAG+GGG 0.608307 7_3:-38191101 None:intergenic
GATACATTAATAGCTCCATC+GGG 0.610936 7_3:-38195733 None:intergenic
TGTTCCATTGAGGACATATG+TGG 0.615625 7_3:+38189863 Msa1103110:CDS
TGCCATCTATTGACATTCTG+GGG 0.621381 7_3:+38189516 Msa1103110:CDS
GCTCCAACAAGGCAGAGAGT+TGG 0.624970 7_3:-38191079 None:intergenic
CGATTTGTTAAACATAGCGA+AGG 0.625274 7_3:+38190832 Msa1103110:CDS
GTATCTGTGACAACAGAGGA+AGG 0.627008 7_3:+38195751 Msa1103110:CDS
AAATACCAGATGGACTTGAA+AGG 0.630381 7_3:-38197043 None:intergenic
TTAATGATGACACCTAACAA+TGG 0.632755 7_3:-38197114 None:intergenic
ATAAATGTTTCAGACTCTGA+GGG 0.637253 7_3:+38191030 Msa1103110:intron
ATACATCAAGATTACAACCA+AGG 0.640530 7_3:-38197084 None:intergenic
ATGTCTCTTCAGCAGGCCTG+GGG 0.642348 7_3:-38192356 None:intergenic
GGCAGAGGAAAGATTGACCG+AGG 0.642862 7_3:+38190684 Msa1103110:CDS
GTATGTTCACGACCTTTCAG+GGG 0.650446 7_3:+38193236 Msa1103110:CDS
GCACACCTGATCAGAAGGTG+AGG 0.652956 7_3:-38193268 None:intergenic
CAATACTTGATGGAGTGGAG+GGG 0.653044 7_3:-38197229 None:intergenic
TTGTAGGTAACGGATACCCC+AGG 0.653392 7_3:+38192340 Msa1103110:intron
AACAGAGGAAGGAATACATG+AGG 0.672547 7_3:+38195762 Msa1103110:CDS
GGCCTGCTGAAGAGACATGA+CGG 0.673056 7_3:+38192361 Msa1103110:CDS
TAATGTATCTGTGACAACAG+AGG 0.673897 7_3:+38195747 Msa1103110:CDS
ATTGTAAAGTAAGTGAACTG+AGG 0.675508 7_3:+38196899 Msa1103110:three_prime_UTR
ACTCTCTACTGGCAAGCCTG+AGG 0.680092 7_3:+38191135 Msa1103110:CDS
TCAGTTAAACAAGCTCTCTG+TGG 0.681891 7_3:+38196808 Msa1103110:three_prime_UTR
CTGCTGTTGGTAGATGTGAA+AGG 0.682866 7_3:-38193209 None:intergenic
ACAGTCTTTGACAAAACGAG+AGG 0.707207 7_3:+38190663 Msa1103110:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCTAAATTCTTTTTTAA+TGG - chr7_3:38191954-38191973 None:intergenic 10.0%
!! ATTCTTAAACTAATTAATAT+GGG + chr7_3:38193011-38193030 Msa1103110:intron 10.0%
!!! TTTATTTTTATGAACTATTA+TGG + chr7_3:38195379-38195398 Msa1103110:intron 10.0%
!! TAACATAATTTACAAATTAT+CGG - chr7_3:38195416-38195435 None:intergenic 10.0%
!!! ATGTCATTTTTTTTGATAAA+AGG + chr7_3:38190354-38190373 Msa1103110:intron 15.0%
!! AATATATCATCAAAGTAAAA+AGG - chr7_3:38190602-38190621 None:intergenic 15.0%
!!! TTTTCAAATTCAATTTCATT+GGG - chr7_3:38191604-38191623 None:intergenic 15.0%
!!! ATTTTCAAATTCAATTTCAT+TGG - chr7_3:38191605-38191624 None:intergenic 15.0%
!!! TATATGTATAGATTTTGAAT+TGG - chr7_3:38191679-38191698 None:intergenic 15.0%
!! ATTCAAAATCTATACATATA+CGG + chr7_3:38191679-38191698 Msa1103110:intron 15.0%
!! ATATACTACTAAAAAATTGA+AGG - chr7_3:38192413-38192432 None:intergenic 15.0%
!! ATTTATTCATTTCTTGATTA+CGG + chr7_3:38192574-38192593 Msa1103110:intron 15.0%
!! GATTCTTAAACTAATTAATA+TGG + chr7_3:38193010-38193029 Msa1103110:intron 15.0%
!!! GTAAATTATAATTGATTTCT+TGG + chr7_3:38193078-38193097 Msa1103110:intron 15.0%
!! AAAATTATATAAGGATAGAA+TGG - chr7_3:38193127-38193146 None:intergenic 15.0%
!!! TTTTTTCATTCTAATGTATT+TGG + chr7_3:38193647-38193666 Msa1103110:intron 15.0%
!!! TTTTTCATTCTAATGTATTT+GGG + chr7_3:38193648-38193667 Msa1103110:intron 15.0%
!! TTTATATTAGATTGAATCAT+AGG - chr7_3:38194165-38194184 None:intergenic 15.0%
!!! ATAATGTTTTAAGTTATCAT+TGG - chr7_3:38194835-38194854 None:intergenic 15.0%
!! TAACTTAAAACATTATAGAT+AGG + chr7_3:38194839-38194858 Msa1103110:intron 15.0%
!!! GTTTTAAATGATAATGAATT+TGG + chr7_3:38195231-38195250 Msa1103110:intron 15.0%
!!! ATGAAAATTCTTTGTTTTAT+TGG - chr7_3:38195874-38195893 None:intergenic 15.0%
!! TTAAAGAAAAAAATTGAATG+CGG - chr7_3:38196006-38196025 None:intergenic 15.0%
!! TTAATATTATGGCATTTAAT+AGG - chr7_3:38196125-38196144 None:intergenic 15.0%
!! TATTAAATGCCATAATATTA+AGG + chr7_3:38196124-38196143 Msa1103110:intron 15.0%
!! ATTAAATGCCATAATATTAA+GGG + chr7_3:38196125-38196144 Msa1103110:intron 15.0%
!! ACAAATAGAAATGTCTATTT+GGG - chr7_3:38189605-38189624 Msa1103100:intron 20.0%
!! TACAAATAGAAATGTCTATT+TGG - chr7_3:38189606-38189625 Msa1103100:intron 20.0%
!!! TCATTATTCCCATTTTAAAA+AGG + chr7_3:38190066-38190085 Msa1103110:intron 20.0%
!!! TTTTAGTCATTTTCTAATTG+TGG + chr7_3:38190122-38190141 Msa1103110:intron 20.0%
!!! TTCATTTAGAAAGTTTTAGT+AGG + chr7_3:38190301-38190320 Msa1103110:intron 20.0%
!! TATCAAAAAAAATGACATCT+AGG - chr7_3:38190352-38190371 None:intergenic 20.0%
!!! TGTTATTTGTTTTTGTTGAA+TGG + chr7_3:38190390-38190409 Msa1103110:intron 20.0%
!!! ATGATGCTTAAATTTTTCAA+AGG + chr7_3:38190446-38190465 Msa1103110:intron 20.0%
!!! TGATGCTTAAATTTTTCAAA+GGG + chr7_3:38190447-38190466 Msa1103110:intron 20.0%
!! CATTCAAAAGAATTTATTTG+TGG - chr7_3:38190550-38190569 None:intergenic 20.0%
!!! CACAAATAAATTCTTTTGAA+TGG + chr7_3:38190548-38190567 Msa1103110:intron 20.0%
!!! AAAATAATTGAAGAGAGTTT+TGG + chr7_3:38190788-38190807 Msa1103110:CDS 20.0%
!!! ATCTCTGTCATTTTTTTTAT+GGG + chr7_3:38191294-38191313 Msa1103110:intron 20.0%
!!! AAATAAGCTTTTTCAATGAA+AGG - chr7_3:38191396-38191415 None:intergenic 20.0%
!! TTTGAAAATAATGAGTGATT+TGG + chr7_3:38191616-38191635 Msa1103110:intron 20.0%
!! TTCAAAATCTATACATATAC+GGG + chr7_3:38191680-38191699 Msa1103110:intron 20.0%
!! TCAAAAAAAAAAAGATGTCT+GGG - chr7_3:38191781-38191800 None:intergenic 20.0%
!! TTCAAAAAAAAAAAGATGTC+TGG - chr7_3:38191782-38191801 None:intergenic 20.0%
!!! AATTCTTTTTTAATGGCAAT+TGG - chr7_3:38191947-38191966 None:intergenic 20.0%
!!! ATGATAATGATGATGAAATT+TGG - chr7_3:38191987-38192006 None:intergenic 20.0%
!!! TAACATTTCTTTTCCTTTTT+TGG + chr7_3:38192384-38192403 Msa1103110:intron 20.0%
!!! TTAGTTTGTAATCTGTAATT+AGG - chr7_3:38192985-38193004 None:intergenic 20.0%
!! ATTTACTAGAAATGATTATG+AGG - chr7_3:38193064-38193083 None:intergenic 20.0%
!! ATGTGAATTTGATCTTTAAA+TGG + chr7_3:38193363-38193382 Msa1103110:intron 20.0%
!! TTAAGTAAGACATTAATCAA+AGG + chr7_3:38193599-38193618 Msa1103110:intron 20.0%
!!! TTTTCATTCTAATGTATTTG+GGG + chr7_3:38193649-38193668 Msa1103110:intron 20.0%
!! TCAGATTATTGTGTATTTAT+AGG - chr7_3:38193715-38193734 None:intergenic 20.0%
!! CATTATATAATCCAGTATTT+GGG + chr7_3:38193773-38193792 Msa1103110:intron 20.0%
!! AAAAACACATGTTTATTTAG+TGG - chr7_3:38194188-38194207 None:intergenic 20.0%
!!! TTAATGTTCAGTTGATTTAA+TGG + chr7_3:38194225-38194244 Msa1103110:intron 20.0%
!! AAATAGTATACCCAAATATA+TGG - chr7_3:38194555-38194574 None:intergenic 20.0%
!! ATATATTTGGGTATACTATT+TGG + chr7_3:38194554-38194573 Msa1103110:intron 20.0%
!! ATCAAATACCTTAAAGAAAT+GGG + chr7_3:38194879-38194898 Msa1103110:intron 20.0%
!!! TAAATGATAATGAATTTGGA+TGG + chr7_3:38195235-38195254 Msa1103110:intron 20.0%
!!! AAATGATAATGAATTTGGAT+GGG + chr7_3:38195236-38195255 Msa1103110:intron 20.0%
!! TATACAAAGAAATCAAAGAA+AGG + chr7_3:38195584-38195603 Msa1103110:CDS 20.0%
!!! TGTATACTAAATTTTCATAG+AGG + chr7_3:38195794-38195813 Msa1103110:intron 20.0%
!!! GTATACTAAATTTTCATAGA+GGG + chr7_3:38195795-38195814 Msa1103110:intron 20.0%
!! CATTTAATAGGAATAAAAAG+TGG - chr7_3:38196113-38196132 None:intergenic 20.0%
!! AAGAATGTTAGTTAATATAG+CGG - chr7_3:38196172-38196191 None:intergenic 20.0%
!! ATATTAACTAACATTCTTCA+AGG + chr7_3:38196174-38196193 Msa1103110:intron 20.0%
!! TAAAAAAATAAGCTTCTACA+TGG - chr7_3:38196492-38196511 None:intergenic 20.0%
!!! CTAAAGTTGATTAACTATTT+CGG + chr7_3:38196608-38196627 Msa1103110:intron 20.0%
!!! AAGAAATTTTCATGTCAAAT+TGG + chr7_3:38196760-38196779 Msa1103110:three_prime_UTR 20.0%
!!! AGAAATTTTCATGTCAAATT+GGG + chr7_3:38196761-38196780 Msa1103110:three_prime_UTR 20.0%
!!! GCATTTAATAATATTTTCCT+TGG + chr7_3:38197067-38197086 Msa1103110:three_prime_UTR 20.0%
! CATGTTAACATTCAAATTGT+AGG + chr7_3:38189436-38189455 Msa1103110:five_prime_UTR 25.0%
!!! TGAACTTCTGTTTTTAACTT+TGG + chr7_3:38189997-38190016 Msa1103110:intron 25.0%
! TATGTATTCAACTATTCACA+TGG - chr7_3:38190092-38190111 None:intergenic 25.0%
!! TGGATTTAAAATTGTTCAAC+AGG + chr7_3:38190142-38190161 Msa1103110:intron 25.0%
!!! AGCAATTTCCATTTTGATTT+TGG + chr7_3:38190248-38190267 Msa1103110:intron 25.0%
! ACAAATAACAAATGACATCT+AGG - chr7_3:38190380-38190399 None:intergenic 25.0%
! AAGTTATAAGTTAGAGCAAA+GGG - chr7_3:38190634-38190653 None:intergenic 25.0%
! TAAGTTATAAGTTAGAGCAA+AGG - chr7_3:38190635-38190654 None:intergenic 25.0%
! AATATATGTTGATGTTATGC+AGG + chr7_3:38190760-38190779 Msa1103110:intron 25.0%
! ATATATGTTGATGTTATGCA+GGG + chr7_3:38190761-38190780 Msa1103110:intron 25.0%
! ACATATCACTGTGTTTAATT+AGG + chr7_3:38190932-38190951 Msa1103110:intron 25.0%
!!! TTTGTTTTACACTTCTTAGA+TGG + chr7_3:38191212-38191231 Msa1103110:intron 25.0%
! CTTGAATTGAAATATTGATC+TGG + chr7_3:38191235-38191254 Msa1103110:intron 25.0%
! TGCATAAAACACAATTTCTA+AGG - chr7_3:38191275-38191294 None:intergenic 25.0%
!!! CATCTCTGTCATTTTTTTTA+TGG + chr7_3:38191293-38191312 Msa1103110:intron 25.0%
! TCCAATAAGTTCTTTCTAAT+AGG + chr7_3:38191364-38191383 Msa1103110:intron 25.0%
! TCCTATTAGAAAGAACTTAT+TGG - chr7_3:38191368-38191387 None:intergenic 25.0%
! TTTCACTCAAACTTATCTTA+TGG + chr7_3:38191413-38191432 Msa1103110:intron 25.0%
! TTTCAAATGTTAAGCTTTAC+AGG + chr7_3:38191743-38191762 Msa1103110:intron 25.0%
! ATAAAGACAACAATCAACAA+AGG - chr7_3:38192010-38192029 None:intergenic 25.0%
!! TGTTGAATTTAATCTAGCTT+AGG - chr7_3:38192043-38192062 None:intergenic 25.0%
!! ATTCAACAAATGTTTTGCTT+TGG + chr7_3:38192055-38192074 Msa1103110:intron 25.0%
!! TTCAACAAATGTTTTGCTTT+GGG + chr7_3:38192056-38192075 Msa1103110:intron 25.0%
! AAGCATGAGAAAAGATTATA+TGG - chr7_3:38192128-38192147 None:intergenic 25.0%
!! CAAATCTGAAATGTTAAGTA+GGG - chr7_3:38192162-38192181 None:intergenic 25.0%
!! ACAAATCTGAAATGTTAAGT+AGG - chr7_3:38192163-38192182 None:intergenic 25.0%
! AAATTGAAGGAAACCAAAAA+AGG - chr7_3:38192400-38192419 None:intergenic 25.0%
!!! TTGGTTTTAGGATTAGTTTT+AGG + chr7_3:38192500-38192519 Msa1103110:intron 25.0%
!!! TTAGTTTTAGGATTGATTCT+AGG + chr7_3:38192512-38192531 Msa1103110:intron 25.0%
! CAAAAATTATCCATCAGTTA+CGG - chr7_3:38192615-38192634 None:intergenic 25.0%
!! TGTTTTCCTATACTAGTAAT+AGG - chr7_3:38192903-38192922 None:intergenic 25.0%
! TACTAATAATCCCTTGATTT+AGG + chr7_3:38192941-38192960 Msa1103110:intron 25.0%
! GTGAAAATATCCTAAATCAA+GGG - chr7_3:38192954-38192973 None:intergenic 25.0%
!!! TTGATTTAGGATATTTTCAC+CGG + chr7_3:38192954-38192973 Msa1103110:intron 25.0%
!! AACTAATTAATATGGGTTGT+TGG + chr7_3:38193018-38193037 Msa1103110:intron 25.0%
! TGTAGATGACAGAAATAATT+TGG + chr7_3:38193167-38193186 Msa1103110:intron 25.0%
! GATTATTGTGTATTTATAGG+TGG - chr7_3:38193712-38193731 None:intergenic 25.0%
! AAATACACAATAATCTGAAG+TGG + chr7_3:38193717-38193736 Msa1103110:intron 25.0%
! TGGATTATATAATGCAGATT+AGG - chr7_3:38193767-38193786 None:intergenic 25.0%
! GCATTATATAATCCAGTATT+TGG + chr7_3:38193772-38193791 Msa1103110:intron 25.0%
!!! GGAGATTTTTTATAGTCTTA+TGG - chr7_3:38193995-38194014 None:intergenic 25.0%
! AAGAAACAAGAATGCTAAAT+TGG - chr7_3:38194016-38194035 None:intergenic 25.0%
!! TTAGCATTCTTGTTTCTTTA+AGG + chr7_3:38194018-38194037 Msa1103110:intron 25.0%
!! TTCAACCAGAAATTTTTGTA+TGG + chr7_3:38194133-38194152 Msa1103110:intron 25.0%
! AATGACCATACAAAAATTTC+TGG - chr7_3:38194141-38194160 None:intergenic 25.0%
! TCCAGTAGTAAAAATTACTT+CGG - chr7_3:38194289-38194308 None:intergenic 25.0%
!! AGCAATAGTTTTCTACATTT+TGG + chr7_3:38194528-38194547 Msa1103110:intron 25.0%
!! TACATTTTGGACCATATATT+TGG + chr7_3:38194541-38194560 Msa1103110:intron 25.0%
!! ACATTTTGGACCATATATTT+GGG + chr7_3:38194542-38194561 Msa1103110:intron 25.0%
! ATCTTGAACATAGTTGTAAA+CGG - chr7_3:38194692-38194711 None:intergenic 25.0%
! GAAGACACAAATGAAAAATA+AGG + chr7_3:38194803-38194822 Msa1103110:intron 25.0%
! AAAACATTATAGATAGGATG+AGG + chr7_3:38194845-38194864 Msa1103110:intron 25.0%
! GATCAAATACCTTAAAGAAA+TGG + chr7_3:38194878-38194897 Msa1103110:intron 25.0%
!! TTGATTTTCCCATTTCTTTA+AGG - chr7_3:38194890-38194909 None:intergenic 25.0%
! GAAAATCAAAATTTGTGTCA+GGG + chr7_3:38194901-38194920 Msa1103110:intron 25.0%
! AAAATCAAAATTTGTGTCAG+GGG + chr7_3:38194902-38194921 Msa1103110:intron 25.0%
! AACTATATAAATACAAGCAC+TGG - chr7_3:38195028-38195047 None:intergenic 25.0%
! TATGAAGAGCAATAATCATT+TGG + chr7_3:38195048-38195067 Msa1103110:intron 25.0%
! ATGAAGAGCAATAATCATTT+GGG + chr7_3:38195049-38195068 Msa1103110:intron 25.0%
! AAAAACTTGCAAACATAACA+AGG - chr7_3:38195162-38195181 None:intergenic 25.0%
!! AATGATAATGAATTTGGATG+GGG + chr7_3:38195237-38195256 Msa1103110:intron 25.0%
!! TATCATTTAATTTATCGGTG+TGG - chr7_3:38195266-38195285 None:intergenic 25.0%
! TTAAAACGTTTGTTTCATGA+TGG + chr7_3:38195542-38195561 Msa1103110:intron 25.0%
!! TAAATTTTCATAGAGGGTAA+TGG + chr7_3:38195801-38195820 Msa1103110:intron 25.0%
!!! TGTTTTATTGGACATTTCTT+AGG - chr7_3:38195862-38195881 None:intergenic 25.0%
! AGTATCAGAAGAAAATATAG+AGG - chr7_3:38196036-38196055 None:intergenic 25.0%
!! ACCTAAAATAGTGTGATTTT+GGG + chr7_3:38196309-38196328 Msa1103110:intron 25.0%
!! TTTCTTCATAAATTTTGCAG+TGG - chr7_3:38196746-38196765 None:intergenic 25.0%
!!! TGTTACAGAAAAGTTTTTTG+AGG + chr7_3:38196953-38196972 Msa1103110:three_prime_UTR 25.0%
!!! GTTACAGAAAAGTTTTTTGA+GGG + chr7_3:38196954-38196973 Msa1103110:three_prime_UTR 25.0%
!!! TTACAGAAAAGTTTTTTGAG+GGG + chr7_3:38196955-38196974 Msa1103110:three_prime_UTR 25.0%
!!! TTTTGTTGTTTCAACCATAT+TGG + chr7_3:38196981-38197000 Msa1103110:three_prime_UTR 25.0%
!! CATTTCTTGTTTCTTAAAGA+TGG - chr7_3:38197008-38197027 None:intergenic 25.0%
! TGTATCTTAAATCCATTGTT+AGG + chr7_3:38197102-38197121 Msa1103110:three_prime_UTR 25.0%
!!! GTTAGTATTTTGAGCTTTTT+TGG + chr7_3:38197164-38197183 Msa1103110:three_prime_UTR 25.0%
! ACAGATTCAAATGTTCTAGA+TGG - chr7_3:38189467-38189486 Msa1103100:intron 30.0%
! TCTAGAACATTTGAATCTGT+TGG + chr7_3:38189467-38189486 Msa1103110:five_prime_UTR 30.0%
!!! TTTTAGTTCGCACAAATTGT+AGG + chr7_3:38189653-38189672 Msa1103110:intron 30.0%
GCAAAAAGAGAGAAAAACAA+AGG + chr7_3:38189689-38189708 Msa1103110:CDS 30.0%
TTAATGTTAAAGCTCATCGT+AGG + chr7_3:38189833-38189852 Msa1103110:intron 30.0%
TCAATAAGAGACCTTTCATA+AGG - chr7_3:38189918-38189937 None:intergenic 30.0%
! ATACTATGAAAAGGTATGTC+AGG + chr7_3:38189956-38189975 Msa1103110:intron 30.0%
! GCACATTCCTTAATTTTTGA+AGG + chr7_3:38190023-38190042 Msa1103110:intron 30.0%
CATACGTCCTTCAAAAATTA+AGG - chr7_3:38190033-38190052 None:intergenic 30.0%
!!! TCACATGGCCTTTTTAAAAT+GGG - chr7_3:38190077-38190096 None:intergenic 30.0%
!! TTCACATGGCCTTTTTAAAA+TGG - chr7_3:38190078-38190097 None:intergenic 30.0%
AAAAAAATGACATCTAGGCT+TGG - chr7_3:38190347-38190366 None:intergenic 30.0%
TCTCGTTTATTTCATCCTAA+TGG + chr7_3:38190491-38190510 Msa1103110:intron 30.0%
GTTTATTTCATCCTAATGGT+AGG + chr7_3:38190495-38190514 Msa1103110:intron 30.0%
TGGAAACAATAAAACTGACT+AGG - chr7_3:38190530-38190549 None:intergenic 30.0%
CTAACTTATAACTTACCATG+TGG + chr7_3:38190640-38190659 Msa1103110:intron 30.0%
ATATCTTGTGAAGGAATATC+TGG + chr7_3:38190715-38190734 Msa1103110:intron 30.0%
! GTATATATCAGAAAGTGCAT+GGG - chr7_3:38190914-38190933 None:intergenic 30.0%
! TGTATATATCAGAAAGTGCA+TGG - chr7_3:38190915-38190934 None:intergenic 30.0%
TATCACTGTGTTTAATTAGG+TGG + chr7_3:38190935-38190954 Msa1103110:intron 30.0%
! AGATGATATGGATTAAGCTT+GGG - chr7_3:38190998-38191017 None:intergenic 30.0%
TGAAACATTTATCAGCAATC+AGG - chr7_3:38191022-38191041 None:intergenic 30.0%
ATAAATGTTTCAGACTCTGA+GGG + chr7_3:38191030-38191049 Msa1103110:intron 30.0%
GGTGTTTCCAAATTTATTAC+AGG - chr7_3:38191061-38191080 None:intergenic 30.0%
AAGAAGATTTGCCTACATTA+GGG - chr7_3:38191105-38191124 None:intergenic 30.0%
AAAGAAGATTTGCCTACATT+AGG - chr7_3:38191106-38191125 None:intergenic 30.0%
TAATGTAGGCAAATCTTCTT+TGG + chr7_3:38191105-38191124 Msa1103110:CDS 30.0%
! AGAAGTGTAAAACAAAAGCA+GGG - chr7_3:38191208-38191227 None:intergenic 30.0%
! AAGAAGTGTAAAACAAAAGC+AGG - chr7_3:38191209-38191228 None:intergenic 30.0%
! AAAACACAATTTCTAAGGAC+CGG - chr7_3:38191270-38191289 None:intergenic 30.0%
ATTCTGATAACCTTTATGAG+TGG - chr7_3:38191332-38191351 None:intergenic 30.0%
GAAAGAACTTATTGGATAGA+GGG - chr7_3:38191360-38191379 None:intergenic 30.0%
AGAAAGAACTTATTGGATAG+AGG - chr7_3:38191361-38191380 None:intergenic 30.0%
TATCTTATGGAGAAGAATCT+TGG + chr7_3:38191426-38191445 Msa1103110:intron 30.0%
GAAGAATCTTGGAAAGATAA+TGG + chr7_3:38191437-38191456 Msa1103110:intron 30.0%
!! AGATAATGGAAACACATCTT+AGG + chr7_3:38191451-38191470 Msa1103110:intron 30.0%
CAAATTCAATTTCATTGGGA+AGG - chr7_3:38191600-38191619 None:intergenic 30.0%
! TGAGTGATTTGGAAAAAATC+TGG + chr7_3:38191627-38191646 Msa1103110:intron 30.0%
!!! TCTTTTTTAATGGCAATTGG+AGG - chr7_3:38191944-38191963 None:intergenic 30.0%
! TGATGATGAAATTTGGAACT+TGG - chr7_3:38191980-38191999 None:intergenic 30.0%
TCAAATCTTCAGCAAATAAG+TGG - chr7_3:38192093-38192112 None:intergenic 30.0%
ACAACAAGAGGAATTCTTAT+GGG + chr7_3:38192195-38192214 Msa1103110:CDS 30.0%
! TTTTAACCATCAGAAGTTTC+AGG + chr7_3:38192227-38192246 Msa1103110:CDS 30.0%
TACATATCAGATAGCTGTAA+TGG + chr7_3:38192303-38192322 Msa1103110:intron 30.0%
AGAAAACCTTGGATATGTAA+AGG - chr7_3:38192455-38192474 None:intergenic 30.0%
ACTAATCCTAAAACCAAGAA+TGG - chr7_3:38192497-38192516 None:intergenic 30.0%
!! CGTAACTGATGGATAATTTT+TGG + chr7_3:38192613-38192632 Msa1103110:intron 30.0%
! ATGTTTTGTCCATTTTCCTT+TGG + chr7_3:38192662-38192681 Msa1103110:intron 30.0%
! TGTTTTGTCCATTTTCCTTT+GGG + chr7_3:38192663-38192682 Msa1103110:intron 30.0%
AATAGAACAATATAGCCCAA+AGG - chr7_3:38192681-38192700 None:intergenic 30.0%
! ATTGTTCTATTGTGGTGTTT+TGG + chr7_3:38192690-38192709 Msa1103110:intron 30.0%
AGAAGTCCTATTACTAGTAT+AGG + chr7_3:38192894-38192913 Msa1103110:intron 30.0%
GGTGAAAATATCCTAAATCA+AGG - chr7_3:38192955-38192974 None:intergenic 30.0%
AATCTGTAATTAGGTTCAAC+CGG - chr7_3:38192976-38192995 None:intergenic 30.0%
TAGAAATGATTATGAGGAAC+AGG - chr7_3:38193058-38193077 None:intergenic 30.0%
GATAGCTATTTAACGAAGAT+AGG - chr7_3:38193429-38193448 None:intergenic 30.0%
TTATATAATGCAGATTAGGC+AGG - chr7_3:38193763-38193782 None:intergenic 30.0%
ATCGCCTTATATTGATCATT+GGG - chr7_3:38193827-38193846 None:intergenic 30.0%
AATCGCCTTATATTGATCAT+TGG - chr7_3:38193828-38193847 None:intergenic 30.0%
ATAAGTTGCTTCCTTATCAA+GGG - chr7_3:38193963-38193982 None:intergenic 30.0%
TAAGGAAGCAACTTATGATT+TGG + chr7_3:38193967-38193986 Msa1103110:intron 30.0%
! CATTCTTGTTTCTTTAAGGA+TGG + chr7_3:38194022-38194041 Msa1103110:intron 30.0%
! GTTGATTTAATGGCTAGTTA+AGG + chr7_3:38194235-38194254 Msa1103110:intron 30.0%
! ACCGAAGTAATTTTTACTAC+TGG + chr7_3:38194285-38194304 Msa1103110:intron 30.0%
AAAGTCAAGACCATAGATTT+GGG + chr7_3:38194323-38194342 Msa1103110:intron 30.0%
! AACCATCAATTTTCCACATT+TGG + chr7_3:38194427-38194446 Msa1103110:intron 30.0%
TGATCATCTTAAAGCTAGAT+TGG - chr7_3:38194583-38194602 None:intergenic 30.0%
AGATGATCAAATTCTCCATT+TGG + chr7_3:38194594-38194613 Msa1103110:intron 30.0%
AACATAGTTGCTATCAAAGT+TGG - chr7_3:38194621-38194640 None:intergenic 30.0%
TCTTGAACATAGTTGTAAAC+GGG - chr7_3:38194691-38194710 None:intergenic 30.0%
AGTTTCTCACAAACATCTTT+AGG + chr7_3:38194761-38194780 Msa1103110:intron 30.0%
! TATAGATAGGATGAGGTTTT+CGG + chr7_3:38194852-38194871 Msa1103110:intron 30.0%
GGAAAATCAAAATTTGTGTC+AGG + chr7_3:38194900-38194919 Msa1103110:intron 30.0%
AAATCAAAATTTGTGTCAGG+GGG + chr7_3:38194903-38194922 Msa1103110:intron 30.0%
TCAATCATTCACTCATATTG+TGG - chr7_3:38194931-38194950 None:intergenic 30.0%
TTTGGGTGTCCATTTATTAT+TGG + chr7_3:38195066-38195085 Msa1103110:intron 30.0%
GGAATGCAACCAATAATAAA+TGG - chr7_3:38195078-38195097 None:intergenic 30.0%
TTGGACATTTCAGAGAAATT+TGG + chr7_3:38195131-38195150 Msa1103110:intron 30.0%
TAAAAGACATAAACACGATG+TGG - chr7_3:38195460-38195479 None:intergenic 30.0%
! ACATCGTGTTTATGTCTTTT+AGG + chr7_3:38195459-38195478 Msa1103110:intron 30.0%
!! GAAACAAACGTTTTAACGAA+AGG - chr7_3:38195538-38195557 None:intergenic 30.0%
GAAATCAAAGAAAGGTTTGA+TGG + chr7_3:38195592-38195611 Msa1103110:CDS 30.0%
! AAAGGTTTGATGGACATTTA+TGG + chr7_3:38195602-38195621 Msa1103110:CDS 30.0%
AGATACATTAATAGCTCCAT+CGG - chr7_3:38195737-38195756 None:intergenic 30.0%
TATGAACTTATCACATCTAC+AGG - chr7_3:38195905-38195924 None:intergenic 30.0%
AAATTGAATGCGGAACTTAA+AGG - chr7_3:38195996-38196015 None:intergenic 30.0%
TCTGAAAGTTTGTAGTATGA+TGG + chr7_3:38196073-38196092 Msa1103110:intron 30.0%
AAATGCCATAATATTAAGGG+CGG + chr7_3:38196128-38196147 Msa1103110:intron 30.0%
! ATTTTCCGCCCTTAATATTA+TGG - chr7_3:38196136-38196155 None:intergenic 30.0%
! CACCTAAAATAGTGTGATTT+TGG + chr7_3:38196308-38196327 Msa1103110:intron 30.0%
! ACCCAAAATCACACTATTTT+AGG - chr7_3:38196313-38196332 None:intergenic 30.0%
GGCAAGTTCAATATAGAATT+GGG - chr7_3:38196538-38196557 None:intergenic 30.0%
AGGCAAGTTCAATATAGAAT+TGG - chr7_3:38196539-38196558 None:intergenic 30.0%
AATGTCACCAGAAAAAAGTA+AGG - chr7_3:38196559-38196578 None:intergenic 30.0%
!!! GACATTTTGCTTTTTGAATG+AGG + chr7_3:38196573-38196592 Msa1103110:intron 30.0%
! TTTTGAATGAGGTGAAGTAT+AGG + chr7_3:38196584-38196603 Msa1103110:intron 30.0%
TTTGAATGAGGTGAAGTATA+GGG + chr7_3:38196585-38196604 Msa1103110:intron 30.0%
ATTGTAAAGTAAGTGAACTG+AGG + chr7_3:38196899-38196918 Msa1103110:three_prime_UTR 30.0%
TTCTTAAAGATGGTCCAATA+TGG - chr7_3:38196998-38197017 None:intergenic 30.0%
ATTAAATGCCAAATACCAGA+TGG - chr7_3:38197056-38197075 None:intergenic 30.0%
ATACATCAAGATTACAACCA+AGG - chr7_3:38197087-38197106 None:intergenic 30.0%
TTAATGATGACACCTAACAA+TGG - chr7_3:38197117-38197136 None:intergenic 30.0%
!!! ATTTTGAGCTTTTTTGGTTG+AGG + chr7_3:38197170-38197189 Msa1103110:three_prime_UTR 30.0%
!!! TTTTGAGCTTTTTTGGTTGA+GGG + chr7_3:38197171-38197190 Msa1103110:three_prime_UTR 30.0%
CTAATGTCATAAGGAGTTAA+GGG - chr7_3:38197202-38197221 None:intergenic 30.0%
ACTAATGTCATAAGGAGTTA+AGG - chr7_3:38197203-38197222 None:intergenic 30.0%
GAATGTTAACATGAGAATGC+TGG - chr7_3:38189429-38189448 Msa1103100:intron 35.0%
TCAATAGATGGCATCACTAT+AGG - chr7_3:38189509-38189528 Msa1103100:intron 35.0%
ATGCCATCTATTGACATTCT+GGG + chr7_3:38189515-38189534 Msa1103110:CDS 35.0%
TATCTGCAACAAAAGGTTCT+TGG + chr7_3:38189564-38189583 Msa1103110:intron 35.0%
TATTTGTATCCTAAACCCTG+TGG + chr7_3:38189618-38189637 Msa1103110:intron 35.0%
AAAAATTAGCGTCAACCACA+GGG - chr7_3:38189636-38189655 Msa1103100:intron 35.0%
AAAAAATTAGCGTCAACCAC+AGG - chr7_3:38189637-38189656 Msa1103100:intron 35.0%
!! GATGAAGGTGTGTTTTGTTA+GGG - chr7_3:38189896-38189915 None:intergenic 35.0%
TGGAGATGGATACTATGAAA+AGG + chr7_3:38189947-38189966 Msa1103110:CDS 35.0%
AAAATTGTTCAACAGGTGCT+AGG + chr7_3:38190149-38190168 Msa1103110:intron 35.0%
AAATTGTTCAACAGGTGCTA+GGG + chr7_3:38190150-38190169 Msa1103110:intron 35.0%
AAAATCACCCAGCAAAGAAA+CGG - chr7_3:38190275-38190294 None:intergenic 35.0%
!! AAGAGAGTTTTGGTCAAGAA+CGG + chr7_3:38190798-38190817 Msa1103110:CDS 35.0%
!! CGATTTGTTAAACATAGCGA+AGG + chr7_3:38190832-38190851 Msa1103110:CDS 35.0%
! CAGATGATATGGATTAAGCT+TGG - chr7_3:38190999-38191018 None:intergenic 35.0%
GATAAATGTTTCAGACTCTG+AGG + chr7_3:38191029-38191048 Msa1103110:intron 35.0%
GGCAATGCCTGTAATAAATT+TGG + chr7_3:38191051-38191070 Msa1103110:CDS 35.0%
AGAAGATTTGCCTACATTAG+GGG - chr7_3:38191104-38191123 None:intergenic 35.0%
TTGAAATATTGATCTGGCCA+AGG + chr7_3:38191241-38191260 Msa1103110:intron 35.0%
TTCCACATTTCCACTCATAA+AGG + chr7_3:38191319-38191338 Msa1103110:intron 35.0%
AACCTTTATGAGTGGAAATG+TGG - chr7_3:38191324-38191343 None:intergenic 35.0%
GCTTCAAAAGAAGATAGAGA+TGG - chr7_3:38191553-38191572 None:intergenic 35.0%
! AGCTGACTCAAAGTTAATTG+AGG + chr7_3:38191570-38191589 Msa1103110:intron 35.0%
AAAATCTGGTGAACACAAAC+AGG + chr7_3:38191641-38191660 Msa1103110:intron 35.0%
! CTTATTTGAATGAGTTGAGC+TGG - chr7_3:38191715-38191734 None:intergenic 35.0%
CAGCTCAACTCATTCAAATA+AGG + chr7_3:38191713-38191732 Msa1103110:intron 35.0%
TATCCAACCTAAATTGACAC+CGG + chr7_3:38191812-38191831 Msa1103110:intron 35.0%
CAAGTCATCTTAAGATGTCT+GGG - chr7_3:38191919-38191938 None:intergenic 35.0%
AAATGTTAAGTAGGGAGGAA+AGG - chr7_3:38192154-38192173 None:intergenic 35.0%
! ATCTGAAATGTTAAGTAGGG+AGG - chr7_3:38192159-38192178 None:intergenic 35.0%
! AGAATTCCTCTTGTTGTGAA+GGG - chr7_3:38192192-38192211 None:intergenic 35.0%
! AAGAATTCCTCTTGTTGTGA+AGG - chr7_3:38192193-38192212 None:intergenic 35.0%
CACAACAAGAGGAATTCTTA+TGG + chr7_3:38192194-38192213 Msa1103110:CDS 35.0%
TGTTAACCTGAAACTTCTGA+TGG - chr7_3:38192236-38192255 None:intergenic 35.0%
CCTGATATGATTGTAGGTAA+CGG + chr7_3:38192330-38192349 Msa1103110:intron 35.0%
GTCAAACCTTTACATATCCA+AGG + chr7_3:38192446-38192465 Msa1103110:intron 35.0%
ATCTTCTACTGAGAAAACCT+TGG - chr7_3:38192466-38192485 None:intergenic 35.0%
AAGATTTCTTCCTCCATTCT+TGG + chr7_3:38192481-38192500 Msa1103110:intron 35.0%
AATCCTAAAACCAAGAATGG+AGG - chr7_3:38192494-38192513 None:intergenic 35.0%
CAATATAGCCCAAAGGAAAA+TGG - chr7_3:38192674-38192693 None:intergenic 35.0%
TGGGCTATATTGTTCTATTG+TGG + chr7_3:38192682-38192701 Msa1103110:intron 35.0%
! ACTGTTTGAGCAAGCTTTTA+GGG - chr7_3:38192747-38192766 None:intergenic 35.0%
! AAAGACCAACTGATTTCGAT+AGG + chr7_3:38192788-38192807 Msa1103110:intron 35.0%
! AAGACCAACTGATTTCGATA+GGG + chr7_3:38192789-38192808 Msa1103110:intron 35.0%
!! ATTTCGATAGGGGTTGTTTT+AGG + chr7_3:38192800-38192819 Msa1103110:intron 35.0%
!! TTTCGATAGGGGTTGTTTTA+GGG + chr7_3:38192801-38192820 Msa1103110:intron 35.0%
!!! GGTTGTTTTAGGGTAGTTTT+CGG + chr7_3:38192811-38192830 Msa1103110:intron 35.0%
AGGGATTATTAGTAAGAGCA+GGG - chr7_3:38192935-38192954 None:intergenic 35.0%
AAGGGATTATTAGTAAGAGC+AGG - chr7_3:38192936-38192955 None:intergenic 35.0%
TGAACATACAAAACTGCTGT+TGG - chr7_3:38193225-38193244 None:intergenic 35.0%
TCAACTTTGTAGCAGTTAGA+AGG - chr7_3:38193530-38193549 None:intergenic 35.0%
! TAGGTGGAAATCTTGTTTCA+TGG - chr7_3:38193696-38193715 None:intergenic 35.0%
TACAGGCAGATATCAAAGAT+TGG - chr7_3:38193926-38193945 None:intergenic 35.0%
TAAGTTGCTTCCTTATCAAG+GGG - chr7_3:38193962-38193981 None:intergenic 35.0%
CATAAGTTGCTTCCTTATCA+AGG - chr7_3:38193964-38193983 None:intergenic 35.0%
! ATGGAATTGTCTTTTCACGT+AGG - chr7_3:38194063-38194082 None:intergenic 35.0%
CTAGTTAAGGATAGTAACCA+TGG + chr7_3:38194248-38194267 Msa1103110:intron 35.0%
CAAAGTCAAGACCATAGATT+TGG + chr7_3:38194322-38194341 Msa1103110:intron 35.0%
AAAGCATATGCCCAAATCTA+TGG - chr7_3:38194336-38194355 None:intergenic 35.0%
ATAGATTTGGGCATATGCTT+TGG + chr7_3:38194335-38194354 Msa1103110:intron 35.0%
TGGATGTATGCTATCAAAGT+TGG - chr7_3:38194402-38194421 None:intergenic 35.0%
! GGAAAATTGATGGTTGCAAA+TGG - chr7_3:38194422-38194441 None:intergenic 35.0%
GTCCAAATGTGGAAAATTGA+TGG - chr7_3:38194432-38194451 None:intergenic 35.0%
CACATTTGGACAGTAGATTT+GGG + chr7_3:38194441-38194460 Msa1103110:intron 35.0%
ACATTTGGACAGTAGATTTG+GGG + chr7_3:38194442-38194461 Msa1103110:intron 35.0%
! GCTATCAAAGTTGGTCTAAA+TGG - chr7_3:38194493-38194512 None:intergenic 35.0%
AGAAAACTATTGCTTGCAGA+TGG - chr7_3:38194522-38194541 None:intergenic 35.0%
TCATCTTAAAGCTAGATTGG+TGG - chr7_3:38194580-38194599 None:intergenic 35.0%
ATGTTCAAGATCCAACTAAC+AGG + chr7_3:38194636-38194655 Msa1103110:intron 35.0%
! GATCCTGTACTTTTCAATCA+TGG + chr7_3:38194709-38194728 Msa1103110:intron 35.0%
! AAGCCATGATTGAAAAGTAC+AGG - chr7_3:38194715-38194734 None:intergenic 35.0%
! ATAGATAGGATGAGGTTTTC+GGG + chr7_3:38194853-38194872 Msa1103110:intron 35.0%
GACATGATTCTTGTGATTGT+TGG + chr7_3:38194955-38194974 Msa1103110:intron 35.0%
ATGTGGTACATGGATAAGAT+GGG - chr7_3:38195443-38195462 None:intergenic 35.0%
TCTTCTGTTGCATATATCAC+AGG - chr7_3:38195667-38195686 None:intergenic 35.0%
GATACATTAATAGCTCCATC+GGG - chr7_3:38195736-38195755 None:intergenic 35.0%
TAATGTATCTGTGACAACAG+AGG + chr7_3:38195747-38195766 Msa1103110:CDS 35.0%
!! TTTTCATAGAGGGTAATGGT+TGG + chr7_3:38195805-38195824 Msa1103110:intron 35.0%
! TCAGATATGGCTATGCTTTT+AGG - chr7_3:38195945-38195964 None:intergenic 35.0%
! AACTGTTTTCCTGTCAGATA+TGG - chr7_3:38195958-38195977 None:intergenic 35.0%
TTAATATAGCGGCGTATTAC+AGG - chr7_3:38196161-38196180 None:intergenic 35.0%
! AGAGTTGGTTAAGAATACAC+TGG - chr7_3:38196277-38196296 None:intergenic 35.0%
TTGGGTTTCACTTTCGATTT+AGG + chr7_3:38196327-38196346 Msa1103110:intron 35.0%
!! AACTTTGAGATGTGCGATAA+TGG + chr7_3:38196456-38196475 Msa1103110:intron 35.0%
!!! GAACTTGCCTTACTTTTTTC+TGG + chr7_3:38196549-38196568 Msa1103110:intron 35.0%
!!! CTTTTGCTAGTTTTCCTGTT+TGG - chr7_3:38196841-38196860 None:intergenic 35.0%
! AAATACCAGATGGACTTGAA+AGG - chr7_3:38197046-38197065 None:intergenic 35.0%
! TTTCAAGTCCATCTGGTATT+TGG + chr7_3:38197045-38197064 Msa1103110:three_prime_UTR 35.0%
GGTTAAGGACTAATGTCATA+AGG - chr7_3:38197211-38197230 None:intergenic 35.0%
GATGCCATCTATTGACATTC+TGG + chr7_3:38189514-38189533 Msa1103110:exon 40.0%
TGCCATCTATTGACATTCTG+GGG + chr7_3:38189516-38189535 Msa1103110:CDS 40.0%
AGGAGGATATCTGCAACAAA+AGG + chr7_3:38189557-38189576 Msa1103110:CDS 40.0%
TGTTCCATTGAGGACATATG+TGG + chr7_3:38189863-38189882 Msa1103110:CDS 40.0%
TTCTCCACATATGTCCTCAA+TGG - chr7_3:38189870-38189889 Msa1103100:intron 40.0%
!! GGATGAAGGTGTGTTTTGTT+AGG - chr7_3:38189897-38189916 None:intergenic 40.0%
CACACCTTCATCCTTATGAA+AGG + chr7_3:38189904-38189923 Msa1103110:CDS 40.0%
GAGACCTTTCATAAGGATGA+AGG - chr7_3:38189911-38189930 None:intergenic 40.0%
ACATGCTTCACTTTGTGCTA+AGG + chr7_3:38190217-38190236 Msa1103110:CDS 40.0%
GAAACGGGCCAAAATCAAAA+TGG - chr7_3:38190259-38190278 None:intergenic 40.0%
AAATCACCCAGCAAAGAAAC+GGG - chr7_3:38190274-38190293 None:intergenic 40.0%
! GTTTCTTTGCTGGGTGATTT+TGG + chr7_3:38190274-38190293 Msa1103110:intron 40.0%
TTTGTCAAAGACTGTCCACA+TGG - chr7_3:38190658-38190677 None:intergenic 40.0%
ACAGTCTTTGACAAAACGAG+AGG + chr7_3:38190663-38190682 Msa1103110:intron 40.0%
ACAAGATATACACCTCACCT+CGG - chr7_3:38190704-38190723 None:intergenic 40.0%
GTGAGGTGTATATCTTGTGA+AGG + chr7_3:38190706-38190725 Msa1103110:intron 40.0%
ATATGAAATCCTCGTCTGTC+TGG + chr7_3:38190871-38190890 Msa1103110:intron 40.0%
AAAAAAATGCCAGACAGACG+AGG - chr7_3:38190883-38190902 None:intergenic 40.0%
! TGATATGGATTAAGCTTGGG+TGG - chr7_3:38190995-38191014 None:intergenic 40.0%
CAAAAGCAGGGTATGTAAGA+AGG - chr7_3:38191196-38191215 None:intergenic 40.0%
!!! GGTTCAATTTTAGGTTGGTC+TGG - chr7_3:38191504-38191523 None:intergenic 40.0%
! TTCACACGGGGTTCAATTTT+AGG - chr7_3:38191513-38191532 None:intergenic 40.0%
! ATTCTCTCCGGTGTCAATTT+AGG - chr7_3:38191822-38191841 None:intergenic 40.0%
CCAAGTCATCTTAAGATGTC+TGG - chr7_3:38191920-38191939 None:intergenic 40.0%
CCAGACATCTTAAGATGACT+TGG + chr7_3:38191917-38191936 Msa1103110:intron 40.0%
AACTATCCCTTCACAACAAG+AGG + chr7_3:38192183-38192202 Msa1103110:CDS 40.0%
CCGTTACCTACAATCATATC+AGG - chr7_3:38192333-38192352 None:intergenic 40.0%
!! CTTCCTCCATTCTTGGTTTT+AGG + chr7_3:38192488-38192507 Msa1103110:intron 40.0%
ATTATCCATCAGTTACGGCA+AGG - chr7_3:38192610-38192629 None:intergenic 40.0%
! CACTGTTTGAGCAAGCTTTT+AGG - chr7_3:38192748-38192767 None:intergenic 40.0%
! AGACCAACTGATTTCGATAG+GGG + chr7_3:38192790-38192809 Msa1103110:intron 40.0%
! TTAGGGTAGTTTTCGGTTGA+TGG + chr7_3:38192818-38192837 Msa1103110:intron 40.0%
GATTATTAGTAAGAGCAGGG+GGG - chr7_3:38192932-38192951 None:intergenic 40.0%
GGATTATTAGTAAGAGCAGG+GGG - chr7_3:38192933-38192952 None:intergenic 40.0%
GGGATTATTAGTAAGAGCAG+GGG - chr7_3:38192934-38192953 None:intergenic 40.0%
TTGTATGTTCACGACCTTTC+AGG + chr7_3:38193234-38193253 Msa1103110:CDS 40.0%
TGTATGTTCACGACCTTTCA+GGG + chr7_3:38193235-38193254 Msa1103110:CDS 40.0%
TACAACCACAAGTTTGAGCA+AGG - chr7_3:38193578-38193597 None:intergenic 40.0%
!! TATTTGGGGCAGTCATCTTT+TGG + chr7_3:38193663-38193682 Msa1103110:intron 40.0%
GAAGTGGAACGTCTGTTAAT+TGG + chr7_3:38193733-38193752 Msa1103110:intron 40.0%
ACGCAGCAATACATATTGCA+AGG - chr7_3:38193804-38193823 None:intergenic 40.0%
GCGTCCCAATGATCAATATA+AGG + chr7_3:38193820-38193839 Msa1103110:intron 40.0%
CGATATTTCTTTGGCAGTTG+GGG - chr7_3:38193869-38193888 None:intergenic 40.0%
CCGATATTTCTTTGGCAGTT+GGG - chr7_3:38193870-38193889 None:intergenic 40.0%
CCCAACTGCCAAAGAAATAT+CGG + chr7_3:38193867-38193886 Msa1103110:intron 40.0%
CCAACTGCCAAAGAAATATC+GGG + chr7_3:38193868-38193887 Msa1103110:intron 40.0%
TACCACACCCGATATTTCTT+TGG - chr7_3:38193878-38193897 None:intergenic 40.0%
GGCAGATATCAAAGATTGGT+TGG - chr7_3:38193922-38193941 None:intergenic 40.0%
GAAATGGCTCAATCGAAGAA+TGG - chr7_3:38194082-38194101 None:intergenic 40.0%
ATTGAGCCATTTCTATGCCT+AGG + chr7_3:38194089-38194108 Msa1103110:intron 40.0%
TCACTTCCTAGGCATAGAAA+TGG - chr7_3:38194098-38194117 None:intergenic 40.0%
CACTTCTTCAATCACTTCCT+AGG - chr7_3:38194109-38194128 None:intergenic 40.0%
! GGTAAGTCTTTTTCTTGCCA+TGG - chr7_3:38194268-38194287 None:intergenic 40.0%
CGATCGTCTCAAATCTAGAT+TGG - chr7_3:38194364-38194383 None:intergenic 40.0%
! GCTATCAAAGTTGGTCGAAA+TGG - chr7_3:38194393-38194412 None:intergenic 40.0%
CCAAATCTACTGTCCAAATG+TGG - chr7_3:38194443-38194462 None:intergenic 40.0%
CCACATTTGGACAGTAGATT+TGG + chr7_3:38194440-38194459 Msa1103110:intron 40.0%
TGGCTGTATGCTATCAAAGT+TGG - chr7_3:38194502-38194521 None:intergenic 40.0%
! GCTATCAAAGTTGGTCCAAA+TGG - chr7_3:38194612-38194631 None:intergenic 40.0%
TTGGTTGCATTCCTTGCTTA+TGG + chr7_3:38195085-38195104 Msa1103110:intron 40.0%
ATTAGCACGAGACATTTGCA+TGG - chr7_3:38195207-38195226 None:intergenic 40.0%
ACAAATTATCGGACACGACA+TGG - chr7_3:38195405-38195424 None:intergenic 40.0%
GATGTGGTACATGGATAAGA+TGG - chr7_3:38195444-38195463 None:intergenic 40.0%
CATAAACACGATGTGGTACA+TGG - chr7_3:38195453-38195472 None:intergenic 40.0%
AACAGAGGAAGGAATACATG+AGG + chr7_3:38195762-38195781 Msa1103110:CDS 40.0%
AAAGCATAGCCATATCTGAC+AGG + chr7_3:38195946-38195965 Msa1103110:intron 40.0%
! TGTACACTGCATCCTTTTGA+GGG + chr7_3:38196212-38196231 Msa1103110:intron 40.0%
GATTGTCTATTGCCCTCAAA+AGG - chr7_3:38196227-38196246 None:intergenic 40.0%
GGTGCTAAATCTTAGAGAGT+TGG - chr7_3:38196292-38196311 None:intergenic 40.0%
TCCTACAAGTGTGTCTTTCT+TGG - chr7_3:38196368-38196387 None:intergenic 40.0%
GAGACTGTAACTACATGACT+TGG + chr7_3:38196412-38196431 Msa1103110:intron 40.0%
TGAGCTTCTCAATTTGCAGA+TGG + chr7_3:38196668-38196687 Msa1103110:CDS 40.0%
GTTGCTTGCATCTTTGATCT+TGG - chr7_3:38196694-38196713 None:intergenic 40.0%
TCAGTTAAACAAGCTCTCTG+TGG + chr7_3:38196808-38196827 Msa1103110:three_prime_UTR 40.0%
!! CTAGTTTTCCTGTTTGGATG+CGG - chr7_3:38196835-38196854 None:intergenic 40.0%
ATTACTGCCAGCAAGGAATT+AGG + chr7_3:38196875-38196894 Msa1103110:three_prime_UTR 40.0%
TACAATGCCTAATTCCTTGC+TGG - chr7_3:38196885-38196904 None:intergenic 40.0%
GACCCCAGAATGTCAATAGA+TGG - chr7_3:38189521-38189540 Msa1103100:intron 45.0%
!! AGGAACTTGCTGTTCCATTG+AGG + chr7_3:38189853-38189872 Msa1103110:intron 45.0%
TCTCTTATTGAGCTGACGCT+TGG + chr7_3:38189927-38189946 Msa1103110:CDS 45.0%
!! AGGTTGATGGTTTGAGGAAG+AGG + chr7_3:38190174-38190193 Msa1103110:CDS 45.0%
!! GGTTGATGGTTTGAGGAAGA+GGG + chr7_3:38190175-38190194 Msa1103110:CDS 45.0%
AGGAAGAGGGTAGTATCTGT+TGG + chr7_3:38190188-38190207 Msa1103110:CDS 45.0%
GAGGGTAGTATCTGTTGGAA+AGG + chr7_3:38190193-38190212 Msa1103110:CDS 45.0%
!! ATTTTGGCCCGTTTCTTTGC+TGG + chr7_3:38190264-38190283 Msa1103110:intron 45.0%
! TTTTGGCCCGTTTCTTTGCT+GGG + chr7_3:38190265-38190284 Msa1103110:intron 45.0%
GACATCTAGGCTTGGCAAAA+GGG - chr7_3:38190339-38190358 None:intergenic 45.0%
TGACATCTAGGCTTGGCAAA+AGG - chr7_3:38190340-38190359 None:intergenic 45.0%
GGACAATGCTACCTACCATT+AGG - chr7_3:38190509-38190528 None:intergenic 45.0%
TTTGACAAAACGAGAGGCAG+AGG + chr7_3:38190669-38190688 Msa1103110:CDS 45.0%
CAGCAATCAGGCAGATGATA+TGG - chr7_3:38191010-38191029 None:intergenic 45.0%
TTGGTCCATGTACTCTCTAC+TGG + chr7_3:38191124-38191143 Msa1103110:CDS 45.0%
CAAATTCAGCTGCATACCTC+AGG - chr7_3:38191154-38191173 None:intergenic 45.0%
ATTGATCTGGCCAAGGTAAC+CGG + chr7_3:38191248-38191267 Msa1103110:intron 45.0%
! TTTCTAAGGACCGGTTACCT+TGG - chr7_3:38191261-38191280 None:intergenic 45.0%
!! CACGGGGTTCAATTTTAGGT+TGG - chr7_3:38191509-38191528 None:intergenic 45.0%
AGACACCAACGTGATTCACA+CGG - chr7_3:38191527-38191546 None:intergenic 45.0%
! AATGAGTTGAGCTGGACTCT+TGG - chr7_3:38191707-38191726 None:intergenic 45.0%
! TCTCCGGTGTCAATTTAGGT+TGG - chr7_3:38191818-38191837 None:intergenic 45.0%
GTCTCAGGTTCAATTCTCTC+CGG - chr7_3:38191834-38191853 None:intergenic 45.0%
GAATTGAACCTGAGACCTTG+AGG + chr7_3:38191838-38191857 Msa1103110:intron 45.0%
GGCATGCCTGATATGATTGT+AGG + chr7_3:38192324-38192343 Msa1103110:intron 45.0%
CAACCCCTATCGAAATCAGT+TGG - chr7_3:38192796-38192815 None:intergenic 45.0%
!!! GGTAGTTTTCGGTTGATGGT+AGG + chr7_3:38192822-38192841 Msa1103110:intron 45.0%
! CTGCTGTTGGTAGATGTGAA+AGG - chr7_3:38193212-38193231 None:intergenic 45.0%
GTATGTTCACGACCTTTCAG+GGG + chr7_3:38193236-38193255 Msa1103110:CDS 45.0%
! TAGAAGCACACCTGATCAGA+AGG - chr7_3:38193276-38193295 None:intergenic 45.0%
!! TCTAGCCTTGCTCAAACTTG+TGG + chr7_3:38193570-38193589 Msa1103110:intron 45.0%
CCCGATATTTCTTTGGCAGT+TGG - chr7_3:38193871-38193890 None:intergenic 45.0%
TGCCAAAGAAATATCGGGTG+TGG + chr7_3:38193873-38193892 Msa1103110:intron 45.0%
CAACTAACAGGTTTCTTCCC+CGG + chr7_3:38194648-38194667 Msa1103110:intron 45.0%
CTCCTCTTGTCACATATGAG+CGG - chr7_3:38194999-38195018 None:intergenic 45.0%
CATATGTGACAAGAGGAGGT+TGG + chr7_3:38195001-38195020 Msa1103110:intron 45.0%
!! CTGCTGGCTCGTATTTATGT+TGG + chr7_3:38195112-38195131 Msa1103110:intron 45.0%
TCTCCAAAGCTGATCTGTTG+AGG + chr7_3:38195635-38195654 Msa1103110:CDS 45.0%
!! CTGGAGAAGTACCGTAAATC+AGG + chr7_3:38195709-38195728 Msa1103110:CDS 45.0%
GTATCTGTGACAACAGAGGA+AGG + chr7_3:38195751-38195770 Msa1103110:CDS 45.0%
CAGTGTACACAACATTCGTG+AGG - chr7_3:38196201-38196220 None:intergenic 45.0%
! GTGTACACTGCATCCTTTTG+AGG + chr7_3:38196211-38196230 Msa1103110:intron 45.0%
GCCAAGAAAGACACACTTGT+AGG + chr7_3:38196364-38196383 Msa1103110:intron 45.0%
ATTCCTTGCTGGCAGTAATG+AGG - chr7_3:38196874-38196893 None:intergenic 45.0%
!! CAAATAAAAAAAATTATATA+AGG - chr7_3:38193136-38193155 None:intergenic 5.0%
!!! TTTATTATCATTTAATTTAT+CGG - chr7_3:38195271-38195290 None:intergenic 5.0%
! TCTGGGGTCAGCACTGAAAA+AGG + chr7_3:38189532-38189551 Msa1103110:CDS 50.0%
TAGCGTCAACCACAGGGTTT+AGG - chr7_3:38189630-38189649 Msa1103100:intron 50.0%
ATTGAGCTGACGCTTGGAGA+TGG + chr7_3:38189933-38189952 Msa1103110:CDS 50.0%
!! TAGGGCAGGTTGATGGTTTG+AGG + chr7_3:38190168-38190187 Msa1103110:CDS 50.0%
AGGAAAGATTGACCGAGGTG+AGG + chr7_3:38190689-38190708 Msa1103110:intron 50.0%
ACACCAACTCTCTGCCTTGT+TGG + chr7_3:38191076-38191095 Msa1103110:CDS 50.0%
CTACATTAGGGGCTCCAACA+AGG - chr7_3:38191093-38191112 None:intergenic 50.0%
CTTGTTGGAGCCCCTAATGT+AGG + chr7_3:38191091-38191110 Msa1103110:CDS 50.0%
! GCTTGCCAGTAGAGAGTACA+TGG - chr7_3:38191132-38191151 None:intergenic 50.0%
! TGGTCTGGTTCAGACTGATG+TGG - chr7_3:38191489-38191508 None:intergenic 50.0%
ACACCAACGTGATTCACACG+GGG - chr7_3:38191525-38191544 None:intergenic 50.0%
GACACCAACGTGATTCACAC+GGG - chr7_3:38191526-38191545 None:intergenic 50.0%
TTGAACCTGAGACCTTGAGG+AGG + chr7_3:38191841-38191860 Msa1103110:intron 50.0%
TTGGAGTATGCTCCTCCTCA+AGG - chr7_3:38191856-38191875 None:intergenic 50.0%
! TTGAGGAGGAGCATACTCCA+AGG + chr7_3:38191855-38191874 Msa1103110:intron 50.0%
GATGTCTGGGTAACCCACTT+GGG - chr7_3:38191906-38191925 None:intergenic 50.0%
AGATGTCTGGGTAACCCACT+TGG - chr7_3:38191907-38191926 None:intergenic 50.0%
!! TTGTAGGTAACGGATACCCC+AGG + chr7_3:38192340-38192359 Msa1103110:intron 50.0%
TACCGTCATGTCTCTTCAGC+AGG - chr7_3:38192366-38192385 None:intergenic 50.0%
AGTTGCCTTGCCGTAACTGA+TGG + chr7_3:38192602-38192621 Msa1103110:intron 50.0%
!! TTTCGGTTGATGGTAGGAGC+AGG + chr7_3:38192828-38192847 Msa1103110:intron 50.0%
!! TTCGGTTGATGGTAGGAGCA+GGG + chr7_3:38192829-38192848 Msa1103110:intron 50.0%
ACGACCTTTCAGGGGAATGT+GGG + chr7_3:38193244-38193263 Msa1103110:CDS 50.0%
!! GCAAGGAAGCACCCAAATAC+TGG - chr7_3:38193787-38193806 None:intergenic 50.0%
TGATCTGCCTCCCCTTGATA+AGG + chr7_3:38193949-38193968 Msa1103110:intron 50.0%
GTTGCTTCCTTATCAAGGGG+AGG - chr7_3:38193959-38193978 None:intergenic 50.0%
CGGGGAAGAAACCTGTTAGT+TGG - chr7_3:38194650-38194669 None:intergenic 50.0%
AGAAACTTGCCCATCCAGGA+CGG - chr7_3:38194748-38194767 None:intergenic 50.0%
TGTGAGAAACTTGCCCATCC+AGG - chr7_3:38194752-38194771 None:intergenic 50.0%
CGCTCATATGTGACAAGAGG+AGG + chr7_3:38194997-38195016 Msa1103110:intron 50.0%
CCAGCAGACAACCATAAGCA+AGG - chr7_3:38195099-38195118 None:intergenic 50.0%
CCTTGCTTATGGTTGTCTGC+TGG + chr7_3:38195096-38195115 Msa1103110:intron 50.0%
CGTCCTCAACAGATCAGCTT+TGG - chr7_3:38195641-38195660 None:intergenic 50.0%
TGATCTCACACAGCATGAGC+TGG + chr7_3:38195690-38195709 Msa1103110:CDS 50.0%
TACCGTAAATCAGGTCCCGA+TGG + chr7_3:38195718-38195737 Msa1103110:CDS 50.0%
CTCCATCGGGACCTGATTTA+CGG - chr7_3:38195723-38195742 None:intergenic 50.0%
AAGCCTCATTACTGCCAGCA+AGG + chr7_3:38196868-38196887 Msa1103110:three_prime_UTR 50.0%
! GACTGCCTTTCAAGTCCATC+TGG + chr7_3:38197038-38197057 Msa1103110:three_prime_UTR 50.0%
! GGTCAGCACTGAAAAAGGCG+AGG + chr7_3:38189537-38189556 Msa1103110:CDS 55.0%
! CAGCACTGAAAAAGGCGAGG+AGG + chr7_3:38189540-38189559 Msa1103110:CDS 55.0%
TGTTCAACAGGTGCTAGGGC+AGG + chr7_3:38190154-38190173 Msa1103110:intron 55.0%
GGCAGAGGAAAGATTGACCG+AGG + chr7_3:38190684-38190703 Msa1103110:CDS 55.0%
GCTCCAACAAGGCAGAGAGT+TGG - chr7_3:38191082-38191101 None:intergenic 55.0%
ACTCTCTACTGGCAAGCCTG+AGG + chr7_3:38191135-38191154 Msa1103110:CDS 55.0%
GAACCCCGTGTGAATCACGT+TGG + chr7_3:38191519-38191538 Msa1103110:intron 55.0%
ATGCTCCTCCTCAAGGTCTC+AGG - chr7_3:38191849-38191868 None:intergenic 55.0%
TCTGGGTAACCCACTTGGGT+TGG - chr7_3:38191902-38191921 None:intergenic 55.0%
ATGTCTCTTCAGCAGGCCTG+GGG - chr7_3:38192359-38192378 None:intergenic 55.0%
CATGTCTCTTCAGCAGGCCT+GGG - chr7_3:38192360-38192379 None:intergenic 55.0%
TCATGTCTCTTCAGCAGGCC+TGG - chr7_3:38192361-38192380 None:intergenic 55.0%
GGCCTGCTGAAGAGACATGA+CGG + chr7_3:38192361-38192380 Msa1103110:CDS 55.0%
CACGACCTTTCAGGGGAATG+TGG + chr7_3:38193243-38193262 Msa1103110:CDS 55.0%
AGGTCCCACATTCCCCTGAA+AGG - chr7_3:38193251-38193270 None:intergenic 55.0%
TGGGACCTCACCTTCTGATC+AGG + chr7_3:38193263-38193282 Msa1103110:CDS 55.0%
GCACACCTGATCAGAAGGTG+AGG - chr7_3:38193271-38193290 None:intergenic 55.0%
GGGGAGGCAGATCAAGATAC+AGG - chr7_3:38193943-38193962 None:intergenic 55.0%
CTAACAGGTTTCTTCCCCGG+AGG + chr7_3:38194651-38194670 Msa1103110:intron 55.0%
AGGTTTCTTCCCCGGAGGAA+GGG + chr7_3:38194656-38194675 Msa1103110:intron 55.0%
! AGTTGATTCCCCTTCCTCCG+GGG - chr7_3:38194668-38194687 None:intergenic 55.0%
! GAGTTGATTCCCCTTCCTCC+GGG - chr7_3:38194669-38194688 None:intergenic 55.0%
! GGAGTTGATTCCCCTTCCTC+CGG - chr7_3:38194670-38194689 None:intergenic 55.0%
TTGTTGTCGCCGTCCTGGAT+GGG + chr7_3:38194736-38194755 Msa1103110:intron 55.0%
GAGCGGCGAGTAAATGATGC+TGG - chr7_3:38194982-38195001 None:intergenic 55.0%
CGCCGCTCATATGTGACAAG+AGG + chr7_3:38194994-38195013 Msa1103110:intron 55.0%
TCTGTGGTCCGCATCCAAAC+AGG + chr7_3:38196824-38196843 Msa1103110:three_prime_UTR 55.0%
! CAGGTGCTAGGGCAGGTTGA+TGG + chr7_3:38190161-38190180 Msa1103110:intron 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG - chr7_3:38191875-38191894 None:intergenic 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG - chr7_3:38191882-38191901 None:intergenic 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG - chr7_3:38191883-38191902 None:intergenic 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG - chr7_3:38191888-38191907 None:intergenic 60.0%
ACCACCAGGCCAACCCAAGT+GGG + chr7_3:38191890-38191909 Msa1103110:intron 60.0%
!! GTAACCCACTTGGGTTGGCC+TGG - chr7_3:38191897-38191916 None:intergenic 60.0%
CAGGTTTCTTCCCCGGAGGA+AGG + chr7_3:38194655-38194674 Msa1103110:intron 60.0%
GGTTTCTTCCCCGGAGGAAG+GGG + chr7_3:38194657-38194676 Msa1103110:intron 60.0%
!! GCTTGTTGTTGTCGCCGTCC+TGG + chr7_3:38194731-38194750 Msa1103110:intron 60.0%
GTTGTTGTCGCCGTCCTGGA+TGG + chr7_3:38194735-38194754 Msa1103110:intron 60.0%
GGTCCCAAGCCAACACCACC+AGG + chr7_3:38191876-38191895 Msa1103110:intron 65.0%
CACCACCAGGCCAACCCAAG+TGG + chr7_3:38191889-38191908 Msa1103110:intron 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG - chr7_3:38191894-38191913 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 38189387 38197240 38189387 ID=Msa1103110;Name=Msa1103110
chr7_3 mRNA 38189387 38197240 38189387 ID=Msa1103110-mRNA-1;Parent=Msa1103110;Name=Msa1103110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=128|1|1|1|1|1|12|512|349
chr7_3 exon 38189387 38189578 38189387 ID=Msa1103110-mRNA-1:exon:7791;Parent=Msa1103110-mRNA-1
chr7_3 exon 38189675 38189739 38189675 ID=Msa1103110-mRNA-1:exon:7792;Parent=Msa1103110-mRNA-1
chr7_3 exon 38189855 38189968 38189855 ID=Msa1103110-mRNA-1:exon:7793;Parent=Msa1103110-mRNA-1
chr7_3 exon 38190164 38190238 38190164 ID=Msa1103110-mRNA-1:exon:7794;Parent=Msa1103110-mRNA-1
chr7_3 exon 38190667 38190705 38190667 ID=Msa1103110-mRNA-1:exon:7795;Parent=Msa1103110-mRNA-1
chr7_3 exon 38190782 38190853 38190782 ID=Msa1103110-mRNA-1:exon:7796;Parent=Msa1103110-mRNA-1
chr7_3 exon 38191043 38191156 38191043 ID=Msa1103110-mRNA-1:exon:7797;Parent=Msa1103110-mRNA-1
chr7_3 exon 38192177 38192248 38192177 ID=Msa1103110-mRNA-1:exon:7798;Parent=Msa1103110-mRNA-1
chr7_3 exon 38192346 38192382 38192346 ID=Msa1103110-mRNA-1:exon:7799;Parent=Msa1103110-mRNA-1
chr7_3 exon 38193172 38193284 38193172 ID=Msa1103110-mRNA-1:exon:7800;Parent=Msa1103110-mRNA-1
chr7_3 exon 38195577 38195783 38195577 ID=Msa1103110-mRNA-1:exon:7801;Parent=Msa1103110-mRNA-1
chr7_3 exon 38196651 38197240 38196651 ID=Msa1103110-mRNA-1:exon:7802;Parent=Msa1103110-mRNA-1
chr7_3 five_prime_UTR 38189387 38189514 38189387 ID=Msa1103110-mRNA-1:five_prime_utr;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38189515 38189578 38189515 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38189675 38189739 38189675 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38189855 38189968 38189855 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38190164 38190238 38190164 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38190667 38190705 38190667 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38190782 38190853 38190782 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38191043 38191156 38191043 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38192177 38192248 38192177 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38192346 38192382 38192346 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38193172 38193284 38193172 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38195577 38195783 38195577 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 CDS 38196651 38196728 38196651 ID=Msa1103110-mRNA-1:cds;Parent=Msa1103110-mRNA-1
chr7_3 three_prime_UTR 38196729 38197240 38196729 ID=Msa1103110-mRNA-1:three_prime_utr;Parent=Msa1103110-mRNA-1
Gene Sequence

>Msa1103110

ATGCCATCTATTGACATTCTGGGGTCAGCACTGAAAAAGGCGAGGAGGATATCTGCAACAAAAGGAATTGTCAATATTGCAAAAAGAGAGAAAAACAAAGGTGCAAAACAACTTGACGCGTTGATGAAAGAACTTGCTGTTCCATTGAGGACATATGTGGAGAACTTCCCTAACAAAACACACCTTCATCCTTATGAAAGGTCTCTTATTGAGCTGACGCTTGGAGATGGATACTATGAAAAGGTGCTAGGGCAGGTTGATGGTTTGAGGAAGAGGGTAGTATCTGTTGGAAAGGAACATGCTTCACTTTGTGCTAAGTCTTTGACAAAACGAGAGGCAGAGGAAAGATTGACCGAGGGTCTTAAAATAATTGAAGAGAGTTTTGGTCAAGAACGGAAAGTTGTTGACGATTTGTTAAACATAGCGAAGACTCTGAGGGCAATGCCTGTAATAAATTTGGAAACACCAACTCTCTGCCTTGTTGGAGCCCCTAATGTAGGCAAATCTTCTTTGGTCCATGTACTCTCTACTGGCAAGCCTGAGATTTGTAACTATCCCTTCACAACAAGAGGAATTCTTATGGGTCATATTGTTTTTAACCATCAGAAGTTTCAGGTAACGGATACCCCAGGCCTGCTGAAGAGACATGACGATGACAGAAATAATTTGGAAAAGTTGACACTTGCTGTCCTTTCACATCTACCAACAGCAGTTTTGTATGTTCACGACCTTTCAGGGGAATGTGGGACCTCACCTTCTGATCAGTATTCAATATACAAAGAAATCAAAGAAAGGTTTGATGGACATTTATGGCTTGATGTTGTCTCCAAAGCTGATCTGTTGAGGACGTCTCCTGTGATATATGCAACAGAAGATCGTGATCTCACACAGCATGAGCTGGAGAAGTACCGTAAATCAGGTCCCGATGGAGCTATTAATGTATCTGTGACAACAGAGGAAGGAATACATGAGCTGAAGCACAGAGTGAATGAGCTTCTCAATTTGCAGATGGCCAAGATCAAAGATGCAAGCAACGACAAAGAGAACTAG

Protein sequence

>Msa1103110

MPSIDILGSALKKARRISATKGIVNIAKREKNKGAKQLDALMKELAVPLRTYVENFPNKTHLHPYERSLIELTLGDGYYEKVLGQVDGLRKRVVSVGKEHASLCAKSLTKREAEERLTEGLKIIEESFGQERKVVDDLLNIAKTLRAMPVINLETPTLCLVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVFNHQKFQVTDTPGLLKRHDDDRNNLEKLTLAVLSHLPTAVLYVHDLSGECGTSPSDQYSIYKEIKERFDGHLWLDVVSKADLLRTSPVIYATEDRDLTQHELEKYRKSGPDGAINVSVTTEEGIHELKHRVNELLNLQMAKIKDASNDKEN*