Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067920 | XP_003624128.2 | 97.674 | 258 | 5 | 1 | 1 | 258 | 1 | 257 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067920 | sp|Q84VZ1|FHY1C_ARATH | 67.172 | 198 | 65 | 0 | 57 | 254 | 45 | 242 | 1.17e-100 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067920 | G7KQL8 | 97.674 | 258 | 5 | 1 | 1 | 258 | 1 | 257 | 0.0 | 518 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa1067920 | 0.834516 | 2.865272e-56 | -8.615850e-47 |
| Msa0020630 | Msa1067920 | 0.810073 | 1.381458e-50 | -8.615850e-47 |
| Msa0030000 | Msa1067920 | 0.846214 | 2.499105e-59 | -8.615850e-47 |
| Msa0038310 | Msa1067920 | 0.833388 | 5.487244e-56 | -8.615850e-47 |
| Msa0047470 | Msa1067920 | 0.827716 | 1.341979e-54 | -8.615850e-47 |
| Msa0055280 | Msa1067920 | 0.814140 | 1.792769e-51 | -8.615850e-47 |
| Msa0060600 | Msa1067920 | 0.826263 | 2.986016e-54 | -8.615850e-47 |
| Msa0068410 | Msa1067920 | 0.812333 | 4.469547e-51 | -8.615850e-47 |
| Msa0079250 | Msa1067920 | 0.800444 | 1.437111e-48 | -8.615850e-47 |
| Msa0087110 | Msa1067920 | 0.804951 | 1.688309e-49 | -8.615850e-47 |
| Msa0091480 | Msa1067920 | 0.817466 | 3.250196e-52 | -8.615850e-47 |
| Msa0099120 | Msa1067920 | 0.801595 | 8.360252e-49 | -8.615850e-47 |
| Msa0101060 | Msa1067920 | 0.801202 | 1.006375e-48 | -8.615850e-47 |
| Msa0103060 | Msa1067920 | 0.815498 | 8.966319e-52 | -8.615850e-47 |
| Msa0105340 | Msa1067920 | 0.827537 | 1.481557e-54 | -8.615850e-47 |
| Msa0114250 | Msa1067920 | 0.837178 | 6.057371e-57 | -8.615850e-47 |
| Msa0116260 | Msa1067920 | 0.800006 | 1.764875e-48 | -8.615850e-47 |
| Msa0605230 | Msa1067920 | 0.839640 | 1.403972e-57 | -8.615850e-47 |
| Msa0606060 | Msa1067920 | 0.820490 | 6.672784e-53 | -8.615850e-47 |
| Msa0610770 | Msa1067920 | 0.803505 | 3.376687e-49 | -8.615850e-47 |
| Msa0617830 | Msa1067920 | 0.807081 | 6.015706e-50 | -8.615850e-47 |
| Msa0620640 | Msa1067920 | 0.807783 | 4.270746e-50 | -8.615850e-47 |
| Msa0622390 | Msa1067920 | 0.805615 | 1.225540e-49 | -8.615850e-47 |
| Msa0624730 | Msa1067920 | 0.851910 | 6.523119e-61 | -8.615850e-47 |
| Msa0631840 | Msa1067920 | 0.822122 | 2.804928e-53 | -8.615850e-47 |
| Msa0646390 | Msa1067920 | 0.801203 | 1.005678e-48 | -8.615850e-47 |
| Msa0647000 | Msa1067920 | 0.822111 | 2.821194e-53 | -8.615850e-47 |
| Msa0651400 | Msa1067920 | 0.820440 | 6.850158e-53 | -8.615850e-47 |
| Msa0656270 | Msa1067920 | 0.801426 | 9.053248e-49 | -8.615850e-47 |
| Msa0656680 | Msa1067920 | 0.806049 | 9.931574e-50 | -8.615850e-47 |
| Msa0659040 | Msa1067920 | 0.809703 | 1.659508e-50 | -8.615850e-47 |
| Msa0660880 | Msa1067920 | -0.827597 | 1.432786e-54 | -8.615850e-47 |
| Msa0672120 | Msa1067920 | 0.801983 | 6.959474e-49 | -8.615850e-47 |
| Msa0674220 | Msa1067920 | 0.871861 | 4.949571e-67 | -8.615850e-47 |
| Msa0674300 | Msa1067920 | 0.860461 | 2.032135e-63 | -8.615850e-47 |
| Msa0681890 | Msa1067920 | 0.811778 | 5.905720e-51 | -8.615850e-47 |
| Msa0686610 | Msa1067920 | 0.823532 | 1.316729e-53 | -8.615850e-47 |
| Msa0716740 | Msa1067920 | -0.812295 | 4.554519e-51 | -8.615850e-47 |
| Msa0719340 | Msa1067920 | 0.803141 | 4.016762e-49 | -8.615850e-47 |
| Msa0726610 | Msa1067920 | 0.821437 | 4.038749e-53 | -8.615850e-47 |
| Msa0730180 | Msa1067920 | 0.806032 | 1.001434e-49 | -8.615850e-47 |
| Msa0735700 | Msa1067920 | 0.810861 | 9.340161e-51 | -8.615850e-47 |
| Msa0743640 | Msa1067920 | 0.822472 | 2.326484e-53 | -8.615850e-47 |
| Msa0770430 | Msa1067920 | 0.808844 | 2.536181e-50 | -8.615850e-47 |
| Msa0772150 | Msa1067920 | 0.801433 | 9.025248e-49 | -8.615850e-47 |
| Msa0787720 | Msa1067920 | 0.813283 | 2.768272e-51 | -8.615850e-47 |
| Msa0789270 | Msa1067920 | 0.811931 | 5.470140e-51 | -8.615850e-47 |
| Msa0789280 | Msa1067920 | 0.813884 | 2.041401e-51 | -8.615850e-47 |
| Msa0789290 | Msa1067920 | 0.808217 | 3.451540e-50 | -8.615850e-47 |
| Msa0789300 | Msa1067920 | 0.810274 | 1.250359e-50 | -8.615850e-47 |
| Msa0792510 | Msa1067920 | 0.801239 | 9.891289e-49 | -8.615850e-47 |
| Msa0796450 | Msa1067920 | 0.819611 | 1.060651e-52 | -8.615850e-47 |
| Msa0797220 | Msa1067920 | 0.805861 | 1.087826e-49 | -8.615850e-47 |
| Msa0799200 | Msa1067920 | 0.806759 | 7.038522e-50 | -8.615850e-47 |
| Msa0799290 | Msa1067920 | -0.816710 | 4.805108e-52 | -8.615850e-47 |
| Msa0799710 | Msa1067920 | 0.811506 | 6.767786e-51 | -8.615850e-47 |
| Msa0804060 | Msa1067920 | 0.805579 | 1.247043e-49 | -8.615850e-47 |
| Msa0811510 | Msa1067920 | 0.828169 | 1.043797e-54 | -8.615850e-47 |
| Msa0828570 | Msa1067920 | 0.819043 | 1.428557e-52 | -8.615850e-47 |
| Msa0837510 | Msa1067920 | -0.818970 | 1.484262e-52 | -8.615850e-47 |
| Msa0837990 | Msa1067920 | 0.841969 | 3.440724e-58 | -8.615850e-47 |
| Msa0842050 | Msa1067920 | 0.804950 | 1.689308e-49 | -8.615850e-47 |
| Msa0125230 | Msa1067920 | 0.838695 | 2.467573e-57 | -8.615850e-47 |
| Msa0129790 | Msa1067920 | -0.824015 | 1.014813e-53 | -8.615850e-47 |
| Msa0130390 | Msa1067920 | 0.817999 | 2.464011e-52 | -8.615850e-47 |
| Msa0132620 | Msa1067920 | 0.804215 | 2.404300e-49 | -8.615850e-47 |
| Msa0141550 | Msa1067920 | 0.808215 | 3.455652e-50 | -8.615850e-47 |
| Msa0159750 | Msa1067920 | 0.810339 | 1.210877e-50 | -8.615850e-47 |
| Msa0168100 | Msa1067920 | 0.806707 | 7.219192e-50 | -8.615850e-47 |
| Msa0185390 | Msa1067920 | 0.808732 | 2.680802e-50 | -8.615850e-47 |
| Msa0207000 | Msa1067920 | 0.808532 | 2.957567e-50 | -8.615850e-47 |
| Msa0223100 | Msa1067920 | 0.839628 | 1.414379e-57 | -8.615850e-47 |
| Msa0223290 | Msa1067920 | 0.838333 | 3.061238e-57 | -8.615850e-47 |
| Msa0223380 | Msa1067920 | 0.817818 | 2.707766e-52 | -8.615850e-47 |
| Msa0228180 | Msa1067920 | 0.801957 | 7.045707e-49 | -8.615850e-47 |
| Msa0371610 | Msa1067920 | 0.812101 | 5.022302e-51 | -8.615850e-47 |
| Msa0404690 | Msa1067920 | 0.803191 | 3.921574e-49 | -8.615850e-47 |
| Msa0413740 | Msa1067920 | 0.833241 | 5.971342e-56 | -8.615850e-47 |
| Msa0421800 | Msa1067920 | 0.801697 | 7.966938e-49 | -8.615850e-47 |
| Msa0423110 | Msa1067920 | 0.801067 | 1.072215e-48 | -8.615850e-47 |
| Msa0423360 | Msa1067920 | -0.818504 | 1.893720e-52 | -8.615850e-47 |
| Msa0427050 | Msa1067920 | 0.822074 | 2.877730e-53 | -8.615850e-47 |
| Msa0458790 | Msa1067920 | 0.846890 | 1.634182e-59 | -8.615850e-47 |
| Msa0467800 | Msa1067920 | 0.806430 | 8.256250e-50 | -8.615850e-47 |
| Msa0467880 | Msa1067920 | 0.808814 | 2.574728e-50 | -8.615850e-47 |
| Msa0473240 | Msa1067920 | 0.806354 | 8.569039e-50 | -8.615850e-47 |
| Msa0479230 | Msa1067920 | 0.808412 | 3.136686e-50 | -8.615850e-47 |
| Msa0480320 | Msa1067920 | 0.824814 | 6.584092e-54 | -8.615850e-47 |
| Msa0985430 | Msa1067920 | 0.823946 | 1.053507e-53 | -8.615850e-47 |
| Msa0988500 | Msa1067920 | 0.818622 | 1.780250e-52 | -8.615850e-47 |
| Msa1014350 | Msa1067920 | 0.813990 | 1.934900e-51 | -8.615850e-47 |
| Msa1015060 | Msa1067920 | 0.823418 | 1.400272e-53 | -8.615850e-47 |
| Msa1029320 | Msa1067920 | 0.800059 | 1.721514e-48 | -8.615850e-47 |
| Msa1036350 | Msa1067920 | 0.810661 | 1.031502e-50 | -8.615850e-47 |
| Msa1044040 | Msa1067920 | 0.800469 | 1.420728e-48 | -8.615850e-47 |
| Msa1056640 | Msa1067920 | 0.809184 | 2.144750e-50 | -8.615850e-47 |
| Msa1067910 | Msa1067920 | 0.865711 | 4.842172e-65 | -8.615850e-47 |
| Msa1067920 | Msa1076630 | 0.820387 | 7.046245e-53 | -8.615850e-47 |
| Msa1067920 | Msa1081850 | 0.801788 | 7.634068e-49 | -8.615850e-47 |
| Msa1067920 | Msa1092820 | 0.812857 | 3.432384e-51 | -8.615850e-47 |
| Msa1067920 | Msa1097380 | 0.820150 | 7.985200e-53 | -8.615850e-47 |
| Msa1067920 | Msa1113200 | 0.868056 | 8.666459e-66 | -8.615850e-47 |
| Msa1067920 | Msa1113210 | 0.833464 | 5.252919e-56 | -8.615850e-47 |
| Msa1067920 | Msa1133660 | 0.821108 | 4.810970e-53 | -8.615850e-47 |
| Msa1067920 | Msa1149760 | 0.802298 | 5.996255e-49 | -8.615850e-47 |
| Msa1067920 | Msa1157020 | 0.816699 | 4.834542e-52 | -8.615850e-47 |
| Msa1067920 | Msa1157160 | 0.802156 | 6.412346e-49 | -8.615850e-47 |
| Msa1067920 | Msa1166970 | 0.809238 | 2.088178e-50 | -8.615850e-47 |
| Msa1067920 | Msa1184050 | 0.809766 | 1.608895e-50 | -8.615850e-47 |
| Msa1067920 | Msa1184580 | 0.816521 | 5.298253e-52 | -8.615850e-47 |
| Msa1067920 | Msa1192150 | 0.808802 | 2.589878e-50 | -8.615850e-47 |
| Msa1067920 | Msa1214900 | 0.818707 | 1.702954e-52 | -8.615850e-47 |
| Msa1067920 | Msa1219780 | -0.807372 | 5.220933e-50 | -8.615850e-47 |
| Msa1067920 | Msa1222030 | -0.817142 | 3.843301e-52 | -8.615850e-47 |
| Msa1067920 | Msa1226600 | 0.829786 | 4.236987e-55 | -8.615850e-47 |
| Msa1067920 | Msa1238700 | 0.809801 | 1.580762e-50 | -8.615850e-47 |
| Msa1067920 | Msa1280130 | 0.812994 | 3.203089e-51 | -8.615850e-47 |
| Msa1067920 | Msa1284390 | 0.842827 | 2.037987e-58 | -8.615850e-47 |
| Msa1067920 | Msa1309100 | 0.812377 | 4.371357e-51 | -8.615850e-47 |
| Msa1067920 | Msa1309240 | 0.800177 | 1.628674e-48 | -8.615850e-47 |
| Msa1067920 | Msa1323060 | 0.808870 | 2.503869e-50 | -8.615850e-47 |
| Msa1067920 | Msa1325980 | 0.809620 | 1.729742e-50 | -8.615850e-47 |
| Msa1067920 | Msa1326000 | 0.823116 | 1.647143e-53 | -8.615850e-47 |
| Msa1067920 | Msa1327820 | 0.811443 | 6.985000e-51 | -8.615850e-47 |
| Msa1067920 | Msa1335970 | -0.813462 | 2.528835e-51 | -8.615850e-47 |
| Msa1067920 | Msa1341790 | 0.816254 | 6.078516e-52 | -8.615850e-47 |
| Msa1067920 | Msa1349360 | 0.811122 | 8.198209e-51 | -8.615850e-47 |
| Msa1067920 | Msa1352290 | 0.819910 | 9.059358e-53 | -8.615850e-47 |
| Msa1067920 | Msa1358870 | -0.801066 | 1.072851e-48 | -8.615850e-47 |
| Msa1067920 | Msa1373910 | 0.811598 | 6.462114e-51 | -8.615850e-47 |
| Msa1067920 | Msa1373950 | 0.807816 | 4.201165e-50 | -8.615850e-47 |
| Msa1067920 | Msa1381130 | 0.802473 | 5.517343e-49 | -8.615850e-47 |
| Msa1067920 | Msa1385900 | 0.800226 | 1.591959e-48 | -8.615850e-47 |
| Msa1067920 | Msa1386020 | 0.803357 | 3.623102e-49 | -8.615850e-47 |
| Msa1067920 | Msa1390770 | 0.821985 | 3.017090e-53 | -8.615850e-47 |
| Msa1067920 | Msa1395570 | 0.920673 | 9.492706e-88 | -8.615850e-47 |
| Msa1067920 | Msa1395580 | 0.861678 | 8.665178e-64 | -8.615850e-47 |
| Msa1067920 | Msa1397540 | 0.803997 | 2.668759e-49 | -8.615850e-47 |
| Msa1067920 | Msa1405470 | 0.805233 | 1.473688e-49 | -8.615850e-47 |
| Msa1067920 | Msa1407210 | -0.806855 | 6.715567e-50 | -8.615850e-47 |
| Msa1067920 | Msa1440180 | 0.823889 | 1.086249e-53 | -8.615850e-47 |
| Msa1067920 | Msa1449740 | 0.821727 | 3.461394e-53 | -8.615850e-47 |
| Msa1067920 | Msa1456650 | 0.821351 | 4.229163e-53 | -8.615850e-47 |
| Msa1067920 | Msa1456810 | 0.868765 | 5.120532e-66 | -8.615850e-47 |
| Msa1067920 | Msa1458920 | 0.803657 | 3.139666e-49 | -8.615850e-47 |
| Msa1067920 | Msa1459260 | 0.801884 | 7.294060e-49 | -8.615850e-47 |
| Msa1067920 | Msa1464560 | 0.819034 | 1.435399e-52 | -8.615850e-47 |
| Msa0242290 | Msa1067920 | 0.806035 | 1.000150e-49 | -8.615850e-47 |
| Msa0252180 | Msa1067920 | 0.820928 | 5.293721e-53 | -8.615850e-47 |
| Msa0265820 | Msa1067920 | 0.804193 | 2.429438e-49 | -8.615850e-47 |
| Msa0269360 | Msa1067920 | 0.805538 | 1.271971e-49 | -8.615850e-47 |
| Msa0272420 | Msa1067920 | 0.804009 | 2.653140e-49 | -8.615850e-47 |
| Msa0286790 | Msa1067920 | 0.806401 | 8.375641e-50 | -8.615850e-47 |
| Msa0288240 | Msa1067920 | 0.838823 | 2.287606e-57 | -8.615850e-47 |
| Msa0288330 | Msa1067920 | 0.811395 | 7.153568e-51 | -8.615850e-47 |
| Msa0296760 | Msa1067920 | 0.837684 | 4.495512e-57 | -8.615850e-47 |
| Msa0302650 | Msa1067920 | 0.845631 | 3.601152e-59 | -8.615850e-47 |
| Msa0311330 | Msa1067920 | 0.807665 | 4.524544e-50 | -8.615850e-47 |
| Msa0312570 | Msa1067920 | 0.801503 | 8.731362e-49 | -8.615850e-47 |
| Msa0326670 | Msa1067920 | 0.818881 | 1.555383e-52 | -8.615850e-47 |
| Msa0336270 | Msa1067920 | 0.827140 | 1.844114e-54 | -8.615850e-47 |
| Msa0357380 | Msa1067920 | 0.816924 | 4.301998e-52 | -8.615850e-47 |
| Msa0357390 | Msa1067920 | 0.815503 | 8.943615e-52 | -8.615850e-47 |
| Msa0505390 | Msa1067920 | 0.832120 | 1.133073e-55 | -8.615850e-47 |
| Msa0505660 | Msa1067920 | 0.823657 | 1.231037e-53 | -8.615850e-47 |
| Msa0508200 | Msa1067920 | 0.811095 | 8.308886e-51 | -8.615850e-47 |
| Msa0516310 | Msa1067920 | 0.826486 | 2.642038e-54 | -8.615850e-47 |
| Msa0540320 | Msa1067920 | 0.863090 | 3.189735e-64 | -8.615850e-47 |
| Msa0546380 | Msa1067920 | 0.805701 | 1.175508e-49 | -8.615850e-47 |
| Msa0549740 | Msa1067920 | 0.827829 | 1.260376e-54 | -8.615850e-47 |
| Msa0576420 | Msa1067920 | 0.805364 | 1.383467e-49 | -8.615850e-47 |
| Msa0581920 | Msa1067920 | 0.825311 | 5.023542e-54 | -8.615850e-47 |
| Msa0582110 | Msa1067920 | 0.867401 | 1.406855e-65 | -8.615850e-47 |
| Msa0596100 | Msa1067920 | 0.862566 | 4.627889e-64 | -8.615850e-47 |
| Msa0847200 | Msa1067920 | 0.822066 | 2.889706e-53 | -8.615850e-47 |
| Msa0851740 | Msa1067920 | 0.843217 | 1.604778e-58 | -8.615850e-47 |
| Msa0863760 | Msa1067920 | 0.816295 | 5.953008e-52 | -8.615850e-47 |
| Msa0872660 | Msa1067920 | 0.825023 | 5.874893e-54 | -8.615850e-47 |
| Msa0887000 | Msa1067920 | 0.802975 | 4.346281e-49 | -8.615850e-47 |
| Msa0934830 | Msa1067920 | 0.822864 | 1.885985e-53 | -8.615850e-47 |
| Msa0936430 | Msa1067920 | 0.814976 | 1.170637e-51 | -8.615850e-47 |
| Msa0951720 | Msa1067920 | 0.801837 | 7.457629e-49 | -8.615850e-47 |
| Msa0964680 | Msa1067920 | 0.810181 | 1.309618e-50 | -8.615850e-47 |
| Msa0971860 | Msa1067920 | 0.841463 | 4.680803e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067920 | MtrunA17_Chr7g0249081 | 97.674 | 258 | 5 | 1 | 1 | 258 | 1 | 257 | 0.0 | 518 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067920 | AT1G79790.1 | 67.172 | 198 | 65 | 0 | 57 | 254 | 45 | 242 | 1.19e-101 | 296 |
| Msa1067920 | AT1G79790.2 | 59.641 | 223 | 65 | 1 | 57 | 254 | 45 | 267 | 4.94e-96 | 283 |
| Msa1067920 | AT1G79790.4 | 51.351 | 148 | 47 | 1 | 132 | 254 | 1 | 148 | 1.18e-48 | 158 |
Find 46 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCGTTTACACGGTGAAAA+AGG | 0.177329 | 7_2:-62857191 | Msa1067920:three_prime_UTR |
| TCAGGTATGTCTTTGTAAAA+AGG | 0.200988 | 7_2:+62860895 | None:intergenic |
| GATGGTTTAAGTCTATATTT+TGG | 0.243049 | 7_2:-62857105 | Msa1067920:three_prime_UTR |
| CATATCCATATTCATATTAA+AGG | 0.249629 | 7_2:-62861160 | Msa1067920:five_prime_UTR |
| AAAGACATACCTGAATTCTT+TGG | 0.252605 | 7_2:-62860886 | Msa1067920:CDS |
| ATCTATCAAAATATTTATCT+TGG | 0.276589 | 7_2:-62857925 | Msa1067920:CDS |
| TTTCACCGTGTAAACGAAAT+TGG | 0.283521 | 7_2:+62857195 | None:intergenic |
| AAAGACATTCCAAAGAATTC+AGG | 0.304380 | 7_2:+62860877 | None:intergenic |
| AGCTCCCTTTAATATGAATA+TGG | 0.312650 | 7_2:+62861155 | None:intergenic |
| CTTTAATATGAATATGGATA+TGG | 0.326346 | 7_2:+62861161 | None:intergenic |
| TAATTGAGATTTAAAAGAAT+TGG | 0.334473 | 7_2:-62857080 | Msa1067920:three_prime_UTR |
| CTTAAAACTTGTATGAGAAA+TGG | 0.339472 | 7_2:-62858138 | Msa1067920:CDS |
| TCTATGAAAATACAATATTC+TGG | 0.343770 | 7_2:+62857644 | None:intergenic |
| ATGATGTCAAATAACAGAAT+TGG | 0.364071 | 7_2:+62860937 | None:intergenic |
| AATGGGTATTCATACATAGA+AGG | 0.378988 | 7_2:-62858120 | Msa1067920:CDS |
| ACCGGATACTGAATTCTATA+AGG | 0.381928 | 7_2:-62857693 | Msa1067920:CDS |
| TTTAAGTAATTTGTTGTTGT+TGG | 0.388656 | 7_2:+62861024 | None:intergenic |
| ACAATATACAATTAAGAATC+TGG | 0.398877 | 7_2:+62857162 | None:intergenic |
| TTAAAACTTGTATGAGAAAT+GGG | 0.400962 | 7_2:-62858137 | Msa1067920:CDS |
| ATCATGGATTGAATTTGAAA+AGG | 0.404815 | 7_2:-62860824 | Msa1067920:CDS |
| AATTCTGTTATTTGACATCA+TGG | 0.408113 | 7_2:-62860935 | Msa1067920:CDS |
| TTTATTGTGTTTCAGGAAAG+AGG | 0.415252 | 7_2:-62857718 | Msa1067920:intron |
| GAGAATGGTGTTGTAACATT+TGG | 0.430636 | 7_2:+62861087 | None:intergenic |
| TCATGGATTGAATTTGAAAA+GGG | 0.431737 | 7_2:-62860823 | Msa1067920:CDS |
| AAGTAATTTGTTGTTGTTGG+TGG | 0.431845 | 7_2:+62861027 | None:intergenic |
| TCCTTATAGAATTCAGTATC+CGG | 0.443431 | 7_2:+62857692 | None:intergenic |
| GCGCGAAGAACTGTCATTGA+TGG | 0.454275 | 7_2:-62857277 | Msa1067920:CDS |
| TGCAGGCAGCAGCTGAAGTT+GGG | 0.455154 | 7_2:-62857335 | Msa1067920:CDS |
| GTGCAGGCAGCAGCTGAAGT+TGG | 0.459723 | 7_2:-62857336 | Msa1067920:CDS |
| AGCAGCTGAAGTTGGGATCA+AGG | 0.467596 | 7_2:-62857328 | Msa1067920:CDS |
| CGCGAAGAACTGTCATTGAT+GGG | 0.472416 | 7_2:-62857276 | Msa1067920:CDS |
| TCAAATTCAATCCATGATGT+TGG | 0.476853 | 7_2:+62860829 | None:intergenic |
| ATTGAGCTTTGTTAAAATGA+TGG | 0.477570 | 7_2:-62857123 | Msa1067920:three_prime_UTR |
| ATATCCATATTCATATTAAA+GGG | 0.481669 | 7_2:-62861159 | Msa1067920:five_prime_UTR |
| AATTCTATAAGGAAGTTGTC+AGG | 0.516039 | 7_2:-62857682 | Msa1067920:CDS |
| ATGGGTATTCATACATAGAA+GGG | 0.518947 | 7_2:-62858119 | Msa1067920:CDS |
| TGTTTCAGGAAAGAGGAAAC+CGG | 0.520264 | 7_2:-62857711 | Msa1067920:intron |
| TGAAAAGGGTCTTATTGATG+AGG | 0.538520 | 7_2:-62860809 | Msa1067920:intron |
| GTGATTGAATTTGAAAGTGA+AGG | 0.549852 | 7_2:+62861000 | None:intergenic |
| ATTGCAAACATCCAACATCA+TGG | 0.556457 | 7_2:-62860840 | Msa1067920:CDS |
| ATACACCAATTTCGTTTACA+CGG | 0.566029 | 7_2:-62857200 | Msa1067920:three_prime_UTR |
| GCAGCTGAAGTTGGGATCAA+GGG | 0.568479 | 7_2:-62857327 | Msa1067920:CDS |
| TGGATTGAGAATGAAGAGAA+TGG | 0.573226 | 7_2:+62861072 | None:intergenic |
| GCGAAGAACTGTCATTGATG+GGG | 0.637374 | 7_2:-62857275 | Msa1067920:CDS |
| TGGGTATTCATACATAGAAG+GGG | 0.656968 | 7_2:-62858118 | Msa1067920:CDS |
| CGAAGAACTGTCATTGATGG+GGG | 0.683926 | 7_2:-62857274 | Msa1067920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATAAACAATTTTTGT+GGG | + | chr7_2:62859404-62859423 | None:intergenic | 10.0% |
| !! | ATATCCATATTCATATTAAA+GGG | - | chr7_2:62857068-62857087 | Msa1067920:three_prime_UTR | 15.0% |
| !!! | TTGTTTTCATTTAAATTCAT+AGG | + | chr7_2:62857103-62857122 | None:intergenic | 15.0% |
| !! | TTTATACATAACATGAAAAA+GGG | + | chr7_2:62857494-62857513 | None:intergenic | 15.0% |
| !! | TTATGAATTTAAATTGCAAT+TGG | - | chr7_2:62857532-62857551 | Msa1067920:intron | 15.0% |
| !! | TATGAATTTAAATTGCAATT+GGG | - | chr7_2:62857533-62857552 | Msa1067920:intron | 15.0% |
| !!! | ATTTATAAACAATTTTTGTG+GGG | + | chr7_2:62859403-62859422 | None:intergenic | 15.0% |
| !!! | CTATTTATAAACAATTTTTG+TGG | + | chr7_2:62859405-62859424 | None:intergenic | 15.0% |
| !! | ATTGTTTATAAATAGATTCA+AGG | - | chr7_2:62859410-62859429 | Msa1067920:intron | 15.0% |
| !! | TTGTTTATAAATAGATTCAA+GGG | - | chr7_2:62859411-62859430 | Msa1067920:intron | 15.0% |
| !! | CAAAAAATCAATCATTTAAA+AGG | + | chr7_2:62859697-62859716 | None:intergenic | 15.0% |
| !! | ATCTATCAAAATATTTATCT+TGG | - | chr7_2:62860302-62860321 | Msa1067920:intron | 15.0% |
| !! | TTATGATATTATATCCTAAT+TGG | - | chr7_2:62860398-62860417 | Msa1067920:intron | 15.0% |
| !! | TAATTGAGATTTAAAAGAAT+TGG | - | chr7_2:62861147-62861166 | Msa1067920:five_prime_UTR | 15.0% |
| !! | CTTTAATATGAATATGGATA+TGG | + | chr7_2:62857069-62857088 | None:intergenic | 20.0% |
| !! | CATATCCATATTCATATTAA+AGG | - | chr7_2:62857067-62857086 | Msa1067920:three_prime_UTR | 20.0% |
| !! | AATGAAAACAATTGCAAAAA+TGG | - | chr7_2:62857112-62857131 | Msa1067920:three_prime_UTR | 20.0% |
| !!! | TTTAAGTAATTTGTTGTTGT+TGG | + | chr7_2:62857206-62857225 | None:intergenic | 20.0% |
| !! | CTTTATACATAACATGAAAA+AGG | + | chr7_2:62857495-62857514 | None:intergenic | 20.0% |
| !! | ATGAATTTAAATTGCAATTG+GGG | - | chr7_2:62857534-62857553 | Msa1067920:intron | 20.0% |
| !!! | AAAAGTTCTAAGAAATTTGA+AGG | + | chr7_2:62857603-62857622 | None:intergenic | 20.0% |
| !!! | AATCTGTTTTATTTTCTTTC+AGG | - | chr7_2:62857679-62857698 | Msa1067920:CDS | 20.0% |
| !! | GTTAAAAAATGAAGATGATT+TGG | - | chr7_2:62857898-62857917 | Msa1067920:intron | 20.0% |
| !!! | TTCATTTCTACAACTATTTT+GGG | + | chr7_2:62858114-62858133 | None:intergenic | 20.0% |
| !!! | TTTCATTTCTACAACTATTT+TGG | + | chr7_2:62858115-62858134 | None:intergenic | 20.0% |
| !! | AATAAGTTCATTAAAGTTTG+TGG | + | chr7_2:62858278-62858297 | None:intergenic | 20.0% |
| !! | CAATTCTTAGATTTATTTCA+AGG | + | chr7_2:62858441-62858460 | None:intergenic | 20.0% |
| !! | TTCCAAACTTCTTAATATAA+TGG | - | chr7_2:62858708-62858727 | Msa1067920:intron | 20.0% |
| !! | TACCATTATATTAAGAAGTT+TGG | + | chr7_2:62858713-62858732 | None:intergenic | 20.0% |
| !! | ATAAATGAGAAATTTGTACT+CGG | + | chr7_2:62858915-62858934 | None:intergenic | 20.0% |
| !!! | TGTAAATGGTAATTATGTTT+TGG | - | chr7_2:62859802-62859821 | Msa1067920:intron | 20.0% |
| !!! | GTAAATGGTAATTATGTTTT+GGG | - | chr7_2:62859803-62859822 | Msa1067920:intron | 20.0% |
| !! | ATAAAGACAACAGTATATAT+TGG | + | chr7_2:62859887-62859906 | None:intergenic | 20.0% |
| !!! | TTTTATGTGCTAATTGAAAT+AGG | - | chr7_2:62859932-62859951 | Msa1067920:intron | 20.0% |
| !! | TTAAAACTTGTATGAGAAAT+GGG | - | chr7_2:62860090-62860109 | Msa1067920:intron | 20.0% |
| !!! | CTCAAAGTTATTTTTCTTTA+AGG | + | chr7_2:62860153-62860172 | None:intergenic | 20.0% |
| !!! | CTTTTACTAATTATCCTATA+TGG | - | chr7_2:62860180-62860199 | Msa1067920:intron | 20.0% |
| !!! | AATTCATTTTCTTACCATAT+AGG | + | chr7_2:62860197-62860216 | None:intergenic | 20.0% |
| !!! | ATGATGAGTTCTTTTTTTTT+CGG | + | chr7_2:62860425-62860444 | None:intergenic | 20.0% |
| !! | AAAAAGAACTCATCATTTAA+AGG | - | chr7_2:62860429-62860448 | Msa1067920:intron | 20.0% |
| !! | TCTATGAAAATACAATATTC+TGG | + | chr7_2:62860586-62860605 | None:intergenic | 20.0% |
| !! | ATAAATTGTAAGTGATATCA+TGG | + | chr7_2:62860658-62860677 | None:intergenic | 20.0% |
| !!! | ATTTCATTTGAATTTGCTAA+TGG | - | chr7_2:62860797-62860816 | Msa1067920:intron | 20.0% |
| !! | TTATGATAAACTACTTTGAT+AGG | + | chr7_2:62860827-62860846 | None:intergenic | 20.0% |
| !! | TATCAAAGTAGTTTATCATA+AGG | - | chr7_2:62860826-62860845 | Msa1067920:CDS | 20.0% |
| !! | ACAATATACAATTAAGAATC+TGG | + | chr7_2:62861068-62861087 | None:intergenic | 20.0% |
| !! | AGTTTTCTGTTTGTGTTTTT+GGG | + | chr7_2:62857269-62857288 | None:intergenic | 25.0% |
| !! | AAGTTTTCTGTTTGTGTTTT+TGG | + | chr7_2:62857270-62857289 | None:intergenic | 25.0% |
| ! | ATGATGTCAAATAACAGAAT+TGG | + | chr7_2:62857293-62857312 | None:intergenic | 25.0% |
| !! | AATTCTGTTATTTGACATCA+TGG | - | chr7_2:62857292-62857311 | Msa1067920:CDS | 25.0% |
| !! | ATCATGGATTGAATTTGAAA+AGG | - | chr7_2:62857403-62857422 | Msa1067920:intron | 25.0% |
| !! | TCATGGATTGAATTTGAAAA+GGG | - | chr7_2:62857404-62857423 | Msa1067920:intron | 25.0% |
| !!! | GCTAGAAAGAAAGTTTTTTA+AGG | - | chr7_2:62857706-62857725 | Msa1067920:CDS | 25.0% |
| !!! | GAAAGAAAGTTTTTTAAGGA+TGG | - | chr7_2:62857710-62857729 | Msa1067920:intron | 25.0% |
| !!! | AAAGTTTTTTAAGGATGGAA+GGG | - | chr7_2:62857715-62857734 | Msa1067920:intron | 25.0% |
| ! | TTAGTATTTGATCTTATGTG+TGG | - | chr7_2:62857791-62857810 | Msa1067920:intron | 25.0% |
| !! | AAAAAATGAAGATGATTTGG+AGG | - | chr7_2:62857901-62857920 | Msa1067920:intron | 25.0% |
| ! | TACTGTTTCAATTAATCAAG+TGG | + | chr7_2:62858240-62858259 | None:intergenic | 25.0% |
| ! | TTCTTAGATTTATTTCAAGG+TGG | + | chr7_2:62858438-62858457 | None:intergenic | 25.0% |
| ! | TAAAGAATATAATGGCACAA+GGG | + | chr7_2:62858743-62858762 | None:intergenic | 25.0% |
| ! | TAAATGAGAAATTTGTACTC+GGG | + | chr7_2:62858914-62858933 | None:intergenic | 25.0% |
| ! | AGATTATACAAAATCAGCAA+GGG | + | chr7_2:62859028-62859047 | None:intergenic | 25.0% |
| ! | TAGATTATACAAAATCAGCA+AGG | + | chr7_2:62859029-62859048 | None:intergenic | 25.0% |
| ! | GATAGTTAGATCTCAAATAT+GGG | + | chr7_2:62859266-62859285 | None:intergenic | 25.0% |
| ! | AGATAGTTAGATCTCAAATA+TGG | + | chr7_2:62859267-62859286 | None:intergenic | 25.0% |
| ! | AGGGTTATAAAAAAGAATGA+AGG | + | chr7_2:62859313-62859332 | None:intergenic | 25.0% |
| ! | AAGTAAATTGGGTCAAAATT+TGG | + | chr7_2:62859360-62859379 | None:intergenic | 25.0% |
| ! | GAATAATAGGAATTTACCAT+AGG | + | chr7_2:62859525-62859544 | None:intergenic | 25.0% |
| !! | TTCGCTTAAAGATTTTCATA+AGG | + | chr7_2:62859633-62859652 | None:intergenic | 25.0% |
| !! | TGTTAATCCAATACAGATTT+TGG | - | chr7_2:62859657-62859676 | Msa1067920:intron | 25.0% |
| !! | GTTAATCCAATACAGATTTT+GGG | - | chr7_2:62859658-62859677 | Msa1067920:intron | 25.0% |
| !! | TTGGGTTGTTATTAACATTA+AGG | - | chr7_2:62859821-62859840 | Msa1067920:intron | 25.0% |
| ! | ACAGTATATATTGGAAAATG+AGG | + | chr7_2:62859878-62859897 | None:intergenic | 25.0% |
| !! | CATTTCTCATACAAGTTTTA+AGG | + | chr7_2:62860091-62860110 | None:intergenic | 25.0% |
| ! | CTTAAAACTTGTATGAGAAA+TGG | - | chr7_2:62860089-62860108 | Msa1067920:intron | 25.0% |
| !! | GAATTTTCTATTGCAATATC+TGG | - | chr7_2:62860212-62860231 | Msa1067920:intron | 25.0% |
| !! | TACGTAATATTTTGTACTGT+AGG | - | chr7_2:62860254-62860273 | Msa1067920:intron | 25.0% |
| !! | AAATGGCTCTATAATATTCA+AGG | + | chr7_2:62860490-62860509 | None:intergenic | 25.0% |
| ! | TTCCTGAAACACAATAAAAA+TGG | + | chr7_2:62860507-62860526 | None:intergenic | 25.0% |
| !! | ATTGTATTTTCATAGATGAC+AGG | - | chr7_2:62860590-62860609 | Msa1067920:intron | 25.0% |
| ! | TATATAGTTATTGTCTTCTC+AGG | - | chr7_2:62860859-62860878 | Msa1067920:CDS | 25.0% |
| !!! | ATTGAGCTTTGTTAAAATGA+TGG | - | chr7_2:62861104-62861123 | Msa1067920:CDS | 25.0% |
| !! | GATGGTTTAAGTCTATATTT+TGG | - | chr7_2:62861122-62861141 | Msa1067920:exon | 25.0% |
| AGCTCCCTTTAATATGAATA+TGG | + | chr7_2:62857075-62857094 | None:intergenic | 30.0% | |
| !! | TTTGTGTTCTAAGTGTTTTG+TGG | + | chr7_2:62857178-62857197 | None:intergenic | 30.0% |
| !! | AAGTAATTTGTTGTTGTTGG+TGG | + | chr7_2:62857203-62857222 | None:intergenic | 30.0% |
| GTGATTGAATTTGAAAGTGA+AGG | + | chr7_2:62857230-62857249 | None:intergenic | 30.0% | |
| !! | GTTTTCTGTTTGTGTTTTTG+GGG | + | chr7_2:62857268-62857287 | None:intergenic | 30.0% |
| CAGGTATGTCTTTGTAAAAA+GGG | + | chr7_2:62857334-62857353 | None:intergenic | 30.0% | |
| TCAGGTATGTCTTTGTAAAA+AGG | + | chr7_2:62857335-62857354 | None:intergenic | 30.0% | |
| AAAGACATACCTGAATTCTT+TGG | - | chr7_2:62857341-62857360 | Msa1067920:CDS | 30.0% | |
| AAAGACATTCCAAAGAATTC+AGG | + | chr7_2:62857353-62857372 | None:intergenic | 30.0% | |
| TCAAATTCAATCCATGATGT+TGG | + | chr7_2:62857401-62857420 | None:intergenic | 30.0% | |
| ! | CTTAGAACTTTTGCATTGAA+TGG | - | chr7_2:62857611-62857630 | Msa1067920:intron | 30.0% |
| !! | CATTGAATGGATTGATAGTT+TGG | - | chr7_2:62857624-62857643 | Msa1067920:intron | 30.0% |
| !!! | GAAAGTTTTTTAAGGATGGA+AGG | - | chr7_2:62857714-62857733 | Msa1067920:intron | 30.0% |
| CTTTGTCATATGTAGATTAC+TGG | - | chr7_2:62857838-62857857 | Msa1067920:intron | 30.0% | |
| TTAGATGTGGTTTACTCATA+TGG | - | chr7_2:62857930-62857949 | Msa1067920:CDS | 30.0% | |
| GAAATGAAACCAAATAGTTG+TGG | - | chr7_2:62858126-62858145 | Msa1067920:CDS | 30.0% | |
| AATATCTCTGTCTATGTGAA+TGG | + | chr7_2:62858187-62858206 | None:intergenic | 30.0% | |
| TGTTTCAATTAATCAAGTGG+TGG | + | chr7_2:62858237-62858256 | None:intergenic | 30.0% | |
| !!! | AAATTCTGCAGGTTTTAGTT+TGG | + | chr7_2:62858314-62858333 | None:intergenic | 30.0% |
| ! | TTACCAAGAGTGTATATCTT+TGG | - | chr7_2:62858633-62858652 | Msa1067920:intron | 30.0% |
| AGTGATTTCCAAACTTTCAA+AGG | - | chr7_2:62858673-62858692 | Msa1067920:intron | 30.0% | |
| ! | TTTCACTACCTTTGAAAGTT+TGG | + | chr7_2:62858684-62858703 | None:intergenic | 30.0% |
| CTAAAGAATATAATGGCACA+AGG | + | chr7_2:62858744-62858763 | None:intergenic | 30.0% | |
| TGCAGTGCTAAAGAATATAA+TGG | + | chr7_2:62858751-62858770 | None:intergenic | 30.0% | |
| TGAAAGGGATACTTTATCTT+TGG | - | chr7_2:62858844-62858863 | Msa1067920:intron | 30.0% | |
| AGTAATCTGAGAAGAAAAGT+AGG | + | chr7_2:62859135-62859154 | None:intergenic | 30.0% | |
| !! | GATTTGTTATTGATCGATCA+AGG | + | chr7_2:62859189-62859208 | None:intergenic | 30.0% |
| GGTAGACAAAAACTGATTAT+GGG | + | chr7_2:62859292-62859311 | None:intergenic | 30.0% | |
| AGGTAGACAAAAACTGATTA+TGG | + | chr7_2:62859293-62859312 | None:intergenic | 30.0% | |
| CTGTACAAGACAAATACTTA+AGG | - | chr7_2:62859593-62859612 | Msa1067920:intron | 30.0% | |
| ! | GCTTAAAGATTTTCATAAGG+AGG | + | chr7_2:62859630-62859649 | None:intergenic | 30.0% |
| AGTAGCTATATCAAAAGAGA+GGG | + | chr7_2:62860035-62860054 | None:intergenic | 30.0% | |
| AATGGGTATTCATACATAGA+AGG | - | chr7_2:62860107-62860126 | Msa1067920:intron | 30.0% | |
| ATGGGTATTCATACATAGAA+GGG | - | chr7_2:62860108-62860127 | Msa1067920:intron | 30.0% | |
| AAAAAGCTGATGAACACAAA+AGG | + | chr7_2:62860372-62860391 | None:intergenic | 30.0% | |
| !!! | CTTTTTTTTTCGGTCCAATT+AGG | + | chr7_2:62860415-62860434 | None:intergenic | 30.0% |
| ATATTCAAGGTTTCCATGAA+AGG | + | chr7_2:62860477-62860496 | None:intergenic | 30.0% | |
| !!! | AGCCATTTTTATTGTGTTTC+AGG | - | chr7_2:62860502-62860521 | Msa1067920:CDS | 30.0% |
| TTTATTGTGTTTCAGGAAAG+AGG | - | chr7_2:62860509-62860528 | Msa1067920:CDS | 30.0% | |
| TCCTTATAGAATTCAGTATC+CGG | + | chr7_2:62860538-62860557 | None:intergenic | 30.0% | |
| AATTCTATAAGGAAGTTGTC+AGG | - | chr7_2:62860545-62860564 | Msa1067920:intron | 30.0% | |
| GATAAACTACTTTGATAGGT+TGG | + | chr7_2:62860823-62860842 | None:intergenic | 30.0% | |
| ATACACCAATTTCGTTTACA+CGG | - | chr7_2:62861027-62861046 | Msa1067920:CDS | 30.0% | |
| !! | GAGAATGGTGTTGTAACATT+TGG | + | chr7_2:62857143-62857162 | None:intergenic | 35.0% |
| TGGATTGAGAATGAAGAGAA+TGG | + | chr7_2:62857158-62857177 | None:intergenic | 35.0% | |
| ATTGCAAACATCCAACATCA+TGG | - | chr7_2:62857387-62857406 | Msa1067920:intron | 35.0% | |
| !! | TGAAAAGGGTCTTATTGATG+AGG | - | chr7_2:62857418-62857437 | Msa1067920:intron | 35.0% |
| !!! | TTTGAGTGTGCTTGTTTTGA+TGG | - | chr7_2:62857559-62857578 | Msa1067920:intron | 35.0% |
| !!! | GGAAGGGATTTTGATTTACA+AGG | - | chr7_2:62857731-62857750 | Msa1067920:intron | 35.0% |
| ! | TTGGAGGTACAAATTAGATG+TGG | - | chr7_2:62857917-62857936 | Msa1067920:CDS | 35.0% |
| !! | AATCAAGTGGTGGAGAATTT+TGG | + | chr7_2:62858227-62858246 | None:intergenic | 35.0% |
| !! | CAATTTGGTTTGCAGCTATA+TGG | + | chr7_2:62858389-62858408 | None:intergenic | 35.0% |
| TATAGCTGCAAACCAAATTG+TGG | - | chr7_2:62858389-62858408 | Msa1067920:intron | 35.0% | |
| ACGAAAGGATATCCACAATT+TGG | + | chr7_2:62858404-62858423 | None:intergenic | 35.0% | |
| CAACCAAAGATATACACTCT+TGG | + | chr7_2:62858639-62858658 | None:intergenic | 35.0% | |
| ! | CAAGAGTGTATATCTTTGGT+TGG | - | chr7_2:62858637-62858656 | Msa1067920:intron | 35.0% |
| ACGCATTTATTCTATTGCTG+AGG | + | chr7_2:62858778-62858797 | None:intergenic | 35.0% | |
| AAACAGATGATGAGGGAAAT+GGG | + | chr7_2:62858814-62858833 | None:intergenic | 35.0% | |
| TTATCTTTGGCCATTGATGA+TGG | - | chr7_2:62858857-62858876 | Msa1067920:intron | 35.0% | |
| ! | TTGAACAAGAATTGGTTCAG+CGG | + | chr7_2:62858975-62858994 | None:intergenic | 35.0% |
| ATACAAAATCAGCAAGGGTA+AGG | + | chr7_2:62859023-62859042 | None:intergenic | 35.0% | |
| GAGAGATTTAGTCATCGTTA+TGG | + | chr7_2:62859054-62859073 | None:intergenic | 35.0% | |
| TGACTAAATCTCTCCTTAAG+AGG | - | chr7_2:62859060-62859079 | Msa1067920:intron | 35.0% | |
| ! | ACTTCTTTAGGAGGATAAGT+GGG | + | chr7_2:62859097-62859116 | None:intergenic | 35.0% |
| CAATGAATCACTTCTTTAGG+AGG | + | chr7_2:62859106-62859125 | None:intergenic | 35.0% | |
| TGGCAATGAATCACTTCTTT+AGG | + | chr7_2:62859109-62859128 | None:intergenic | 35.0% | |
| CTGAGAAGAAAAGTAGGAAA+TGG | + | chr7_2:62859129-62859148 | None:intergenic | 35.0% | |
| TTATTGATCGATCAAGGAAG+TGG | + | chr7_2:62859183-62859202 | None:intergenic | 35.0% | |
| GGATTTAGTGTGTAGTGAAA+AGG | + | chr7_2:62859339-62859358 | None:intergenic | 35.0% | |
| GTTAGCGAGGAAAGTAAATT+GGG | + | chr7_2:62859371-62859390 | None:intergenic | 35.0% | |
| AGTTAGCGAGGAAAGTAAAT+TGG | + | chr7_2:62859372-62859391 | None:intergenic | 35.0% | |
| AAAGACTAGGGTGGAATAAT+AGG | + | chr7_2:62859538-62859557 | None:intergenic | 35.0% | |
| AGACGGTAAAGAAAAGACTA+GGG | + | chr7_2:62859550-62859569 | None:intergenic | 35.0% | |
| TGGTGATTGAGAATTTGAGA+CGG | + | chr7_2:62859567-62859586 | None:intergenic | 35.0% | |
| TTTGTCTTGTACAGCTTAAC+TGG | + | chr7_2:62859587-62859606 | None:intergenic | 35.0% | |
| ! | AGCAAAGTTATTGAGAGTAC+TGG | + | chr7_2:62859732-62859751 | None:intergenic | 35.0% |
| AAGTAACATATAGCCAGTCA+AGG | + | chr7_2:62859914-62859933 | None:intergenic | 35.0% | |
| GTACATTATGAATGCTCTCA+TGG | + | chr7_2:62859984-62860003 | None:intergenic | 35.0% | |
| TAGCTATATCAAAAGAGAGG+GGG | + | chr7_2:62860033-62860052 | None:intergenic | 35.0% | |
| GTAGCTATATCAAAAGAGAG+GGG | + | chr7_2:62860034-62860053 | None:intergenic | 35.0% | |
| CAGTAGCTATATCAAAAGAG+AGG | + | chr7_2:62860036-62860055 | None:intergenic | 35.0% | |
| !!! | TGTTCTTCTTTTTCGATGAC+AGG | - | chr7_2:62860065-62860084 | Msa1067920:intron | 35.0% |
| TGGGTATTCATACATAGAAG+GGG | - | chr7_2:62860109-62860128 | Msa1067920:intron | 35.0% | |
| !!! | AATATCTGGTTTGCTTTTCG+TGG | - | chr7_2:62860226-62860245 | Msa1067920:intron | 35.0% |
| ACCGGATACTGAATTCTATA+AGG | - | chr7_2:62860534-62860553 | Msa1067920:intron | 35.0% | |
| ATGCTTATGTACTAGCATCT+TGG | - | chr7_2:62860709-62860728 | Msa1067920:intron | 35.0% | |
| ATGAGGGAGAGATTTACATT+GGG | + | chr7_2:62860737-62860756 | None:intergenic | 35.0% | |
| TTTCACCGTGTAAACGAAAT+TGG | + | chr7_2:62861035-62861054 | None:intergenic | 35.0% | |
| TTTCGTTTACACGGTGAAAA+AGG | - | chr7_2:62861036-62861055 | Msa1067920:CDS | 35.0% | |
| TTCGTTTACACGGTGAAAAA+GGG | - | chr7_2:62861037-62861056 | Msa1067920:CDS | 35.0% | |
| TGTGGTTTACTCATATGGTC+TGG | - | chr7_2:62857935-62857954 | Msa1067920:CDS | 40.0% | |
| CCACAACTTCCACAACTATT+TGG | + | chr7_2:62858138-62858157 | None:intergenic | 40.0% | |
| CCAAATAGTTGTGGAAGTTG+TGG | - | chr7_2:62858135-62858154 | Msa1067920:CDS | 40.0% | |
| ATCTCTGTCTATGTGAATGG+TGG | + | chr7_2:62858184-62858203 | None:intergenic | 40.0% | |
| ! | GTTTGTGGAAATTTTGCAGC+TGG | + | chr7_2:62858263-62858282 | None:intergenic | 40.0% |
| AAGCTGTACTGTTACTGAAG+CGG | + | chr7_2:62858337-62858356 | None:intergenic | 40.0% | |
| ! | GTGGCAGAATTTTACACGAA+AGG | + | chr7_2:62858419-62858438 | None:intergenic | 40.0% |
| CAAATGATCCCCTTTCTCAT+CGG | - | chr7_2:62858464-62858483 | Msa1067920:intron | 40.0% | |
| TTGTGGGGTGAATTATTCAG+TGG | + | chr7_2:62858512-62858531 | None:intergenic | 40.0% | |
| ! | CAATCTTCTCAAGTGTTGTG+GGG | + | chr7_2:62858527-62858546 | None:intergenic | 40.0% |
| ! | CCAATCTTCTCAAGTGTTGT+GGG | + | chr7_2:62858528-62858547 | None:intergenic | 40.0% |
| ! | TCCAATCTTCTCAAGTGTTG+TGG | + | chr7_2:62858529-62858548 | None:intergenic | 40.0% |
| TCCCACACATTATGTTAGAG+TGG | - | chr7_2:62858593-62858612 | Msa1067920:intron | 40.0% | |
| CCCACTCTAACATAATGTGT+GGG | + | chr7_2:62858597-62858616 | None:intergenic | 40.0% | |
| CCCACACATTATGTTAGAGT+GGG | - | chr7_2:62858594-62858613 | Msa1067920:intron | 40.0% | |
| TCCCACTCTAACATAATGTG+TGG | + | chr7_2:62858598-62858617 | None:intergenic | 40.0% | |
| GGGAAATGGGAAGAAGTAAA+GGG | + | chr7_2:62858801-62858820 | None:intergenic | 40.0% | |
| AGGGAAATGGGAAGAAGTAA+AGG | + | chr7_2:62858802-62858821 | None:intergenic | 40.0% | |
| GAAACAGATGATGAGGGAAA+TGG | + | chr7_2:62858815-62858834 | None:intergenic | 40.0% | |
| GAGTAGGAAACAGATGATGA+GGG | + | chr7_2:62858821-62858840 | None:intergenic | 40.0% | |
| TGAGTAGGAAACAGATGATG+AGG | + | chr7_2:62858822-62858841 | None:intergenic | 40.0% | |
| TGTTTCCTACTCACGTGAAA+GGG | - | chr7_2:62858829-62858848 | Msa1067920:intron | 40.0% | |
| AGAAATTTGTACTCGGGTGA+TGG | + | chr7_2:62858908-62858927 | None:intergenic | 40.0% | |
| CTCATTTATTGCTCGCTTGT+TGG | - | chr7_2:62858926-62858945 | Msa1067920:intron | 40.0% | |
| GGTAGGAGTTGAACAAGAAT+TGG | + | chr7_2:62858983-62859002 | None:intergenic | 40.0% | |
| ! | CACTTCTTTAGGAGGATAAG+TGG | + | chr7_2:62859098-62859117 | None:intergenic | 40.0% |
| !! | GTGGTTGACAGTTTTAGTCT+TGG | + | chr7_2:62859164-62859183 | None:intergenic | 40.0% |
| TTGGGAAATGTTCAGTATGG+TGG | + | chr7_2:62859215-62859234 | None:intergenic | 40.0% | |
| AGCTTGGGAAATGTTCAGTA+TGG | + | chr7_2:62859218-62859237 | None:intergenic | 40.0% | |
| AAATTGCTAGAGGGAAGCTT+GGG | + | chr7_2:62859233-62859252 | None:intergenic | 40.0% | |
| ATCTCAAATATGGGTCGTGT+GGG | + | chr7_2:62859257-62859276 | None:intergenic | 40.0% | |
| ACAGGATCTTGAAGAAAGAG+AGG | - | chr7_2:62859449-62859468 | Msa1067920:intron | 40.0% | |
| AAGAAAGAGAGGAAGTAGAC+TGG | - | chr7_2:62859460-62859479 | Msa1067920:intron | 40.0% | |
| CAGATAAGTCAGAGTTGAGA+AGG | - | chr7_2:62859488-62859507 | Msa1067920:intron | 40.0% | |
| GAGACGGTAAAGAAAAGACT+AGG | + | chr7_2:62859551-62859570 | None:intergenic | 40.0% | |
| TGCAAGCCCAAAATCTGTAT+TGG | + | chr7_2:62859667-62859686 | None:intergenic | 40.0% | |
| CTGATGCACGACATTGTAAA+TGG | - | chr7_2:62859788-62859807 | Msa1067920:intron | 40.0% | |
| TGTCTTTATCCTACCTTGAC+TGG | - | chr7_2:62859898-62859917 | Msa1067920:intron | 40.0% | |
| AACATATAGCCAGTCAAGGT+AGG | + | chr7_2:62859910-62859929 | None:intergenic | 40.0% | |
| !! | ACGTTTTGTTCGTGTACACT+TGG | - | chr7_2:62860325-62860344 | Msa1067920:intron | 40.0% |
| TTTGTTCGTGTACACTTGGT+AGG | - | chr7_2:62860329-62860348 | Msa1067920:intron | 40.0% | |
| ACACTCAGACTATCCTTTCA+TGG | - | chr7_2:62860461-62860480 | Msa1067920:intron | 40.0% | |
| TGTTTCAGGAAAGAGGAAAC+CGG | - | chr7_2:62860516-62860535 | Msa1067920:CDS | 40.0% | |
| GATGAGGGAGAGATTTACAT+TGG | + | chr7_2:62860738-62860757 | None:intergenic | 40.0% | |
| ! | TATGTCTGCTGCTTGATTAG+AGG | + | chr7_2:62860769-62860788 | None:intergenic | 40.0% |
| TACTGAAGCGGAAATTCTGC+AGG | + | chr7_2:62858325-62858344 | None:intergenic | 45.0% | |
| CGATGAGAAAGGGGATCATT+TGG | + | chr7_2:62858466-62858485 | None:intergenic | 45.0% | |
| AGTTACGTCCGATGAGAAAG+GGG | + | chr7_2:62858475-62858494 | None:intergenic | 45.0% | |
| CAGTTACGTCCGATGAGAAA+GGG | + | chr7_2:62858476-62858495 | None:intergenic | 45.0% | |
| TCAGTTACGTCCGATGAGAA+AGG | + | chr7_2:62858477-62858496 | None:intergenic | 45.0% | |
| GGGTGAATTATTCAGTGGCT+AGG | + | chr7_2:62858507-62858526 | None:intergenic | 45.0% | |
| CCCACAACACTTGAGAAGAT+TGG | - | chr7_2:62858525-62858544 | Msa1067920:intron | 45.0% | |
| CTGTTTCCTACTCACGTGAA+AGG | - | chr7_2:62858828-62858847 | Msa1067920:intron | 45.0% | |
| AGTATCCCTTTCACGTGAGT+AGG | + | chr7_2:62858837-62858856 | None:intergenic | 45.0% | |
| !! | TTGGCCATTGATGATGGAAC+AGG | - | chr7_2:62858863-62858882 | Msa1067920:intron | 45.0% |
| AGCTCCTGTTCCATCATCAA+TGG | + | chr7_2:62858870-62858889 | None:intergenic | 45.0% | |
| GATGGAACAGGAGCTGTATT+AGG | - | chr7_2:62858875-62858894 | Msa1067920:intron | 45.0% | |
| GCTGAAACAAACTGGTAGAC+AGG | + | chr7_2:62858953-62858972 | None:intergenic | 45.0% | |
| GGCAAGAGAGATACCTCTTA+AGG | + | chr7_2:62859076-62859095 | None:intergenic | 45.0% | |
| GAAATTGCTAGAGGGAAGCT+TGG | + | chr7_2:62859234-62859253 | None:intergenic | 45.0% | |
| TCTCAAATATGGGTCGTGTG+GGG | + | chr7_2:62859256-62859275 | None:intergenic | 45.0% | |
| GATCTCAAATATGGGTCGTG+TGG | + | chr7_2:62859258-62859277 | None:intergenic | 45.0% | |
| GTGTGTAGTGAAAAGGCTGA+GGG | + | chr7_2:62859332-62859351 | None:intergenic | 45.0% | |
| AGTGTGTAGTGAAAAGGCTG+AGG | + | chr7_2:62859333-62859352 | None:intergenic | 45.0% | |
| GGGAAGAGCAAATACTTGAC+AGG | - | chr7_2:62859431-62859450 | Msa1067920:intron | 45.0% | |
| AGAGAGGAAGTAGACTGGAA+AGG | - | chr7_2:62859465-62859484 | Msa1067920:intron | 45.0% | |
| GAAGGACATTTGACTGCCTA+TGG | - | chr7_2:62859506-62859525 | Msa1067920:intron | 45.0% | |
| CGGTAAAGAAAAGACTAGGG+TGG | + | chr7_2:62859547-62859566 | None:intergenic | 45.0% | |
| ATATCAAAAGAGAGGGGGCT+TGG | + | chr7_2:62860028-62860047 | None:intergenic | 45.0% | |
| TCTCAGGCCAAAAAATGTGC+AGG | - | chr7_2:62860875-62860894 | Msa1067920:CDS | 45.0% | |
| CGCGAAGAACTGTCATTGAT+GGG | - | chr7_2:62860951-62860970 | Msa1067920:CDS | 45.0% | |
| GCGAAGAACTGTCATTGATG+GGG | - | chr7_2:62860952-62860971 | Msa1067920:CDS | 45.0% | |
| CGAAGAACTGTCATTGATGG+GGG | - | chr7_2:62860953-62860972 | Msa1067920:CDS | 45.0% | |
| AACAGGAGCTGTATTAGGCG+TGG | - | chr7_2:62858880-62858899 | Msa1067920:intron | 50.0% | |
| GTTCAGCGGCTGAAACAAAC+TGG | + | chr7_2:62858961-62858980 | None:intergenic | 50.0% | |
| CAACTCCTACCTTCCACAAC+CGG | - | chr7_2:62858992-62859011 | Msa1067920:intron | 50.0% | |
| TATGTCCGGTTGTGGAAGGT+AGG | + | chr7_2:62859000-62859019 | None:intergenic | 50.0% | |
| AAGGTATGTCCGGTTGTGGA+AGG | + | chr7_2:62859004-62859023 | None:intergenic | 50.0% | |
| CAGCAAGGGTAAGGTATGTC+CGG | + | chr7_2:62859014-62859033 | None:intergenic | 50.0% | |
| CGTGTGGGGAAATTGCTAGA+GGG | + | chr7_2:62859242-62859261 | None:intergenic | 50.0% | |
| TCGTGTGGGGAAATTGCTAG+AGG | + | chr7_2:62859243-62859262 | None:intergenic | 50.0% | |
| TGCTTGATTAGAGGTGACGC+GGG | + | chr7_2:62860760-62860779 | None:intergenic | 50.0% | |
| CTGCTTGATTAGAGGTGACG+CGG | + | chr7_2:62860761-62860780 | None:intergenic | 50.0% | |
| !!! | GCTGCTGCCTGCACATTTTT+TGG | + | chr7_2:62860885-62860904 | None:intergenic | 50.0% |
| AGCAGCTGAAGTTGGGATCA+AGG | - | chr7_2:62860899-62860918 | Msa1067920:CDS | 50.0% | |
| GCAGCTGAAGTTGGGATCAA+GGG | - | chr7_2:62860900-62860919 | Msa1067920:CDS | 50.0% | |
| GCGCGAAGAACTGTCATTGA+TGG | - | chr7_2:62860950-62860969 | Msa1067920:CDS | 50.0% | |
| GGGTAAGGTATGTCCGGTTG+TGG | + | chr7_2:62859008-62859027 | None:intergenic | 55.0% | |
| GGGGTAAGAGTGAGTTAGCG+AGG | + | chr7_2:62859384-62859403 | None:intergenic | 55.0% | |
| TTAGAGGTGACGCGGGATGA+GGG | + | chr7_2:62860753-62860772 | None:intergenic | 55.0% | |
| ATTAGAGGTGACGCGGGATG+AGG | + | chr7_2:62860754-62860773 | None:intergenic | 55.0% | |
| TGCAGGCAGCAGCTGAAGTT+GGG | - | chr7_2:62860892-62860911 | Msa1067920:CDS | 55.0% | |
| GTGCAGGCAGCAGCTGAAGT+TGG | - | chr7_2:62860891-62860910 | Msa1067920:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 62857057 | 62861192 | 62857057 | ID=Msa1067920;Name=Msa1067920 |
| chr7_2 | mRNA | 62857057 | 62861192 | 62857057 | ID=Msa1067920-mRNA-1;Parent=Msa1067920;Name=Msa1067920-mRNA-1;_AED=0.13;_eAED=0.13;_QI=56|1|1|1|1|1|6|188|258 |
| chr7_2 | exon | 62857057 | 62857368 | 62857057 | ID=Msa1067920-mRNA-1:exon:12829;Parent=Msa1067920-mRNA-1 |
| chr7_2 | exon | 62857638 | 62857725 | 62857638 | ID=Msa1067920-mRNA-1:exon:12828;Parent=Msa1067920-mRNA-1 |
| chr7_2 | exon | 62857903 | 62857973 | 62857903 | ID=Msa1067920-mRNA-1:exon:12827;Parent=Msa1067920-mRNA-1 |
| chr7_2 | exon | 62858048 | 62858162 | 62858048 | ID=Msa1067920-mRNA-1:exon:12826;Parent=Msa1067920-mRNA-1 |
| chr7_2 | exon | 62860497 | 62860548 | 62860497 | ID=Msa1067920-mRNA-1:exon:12825;Parent=Msa1067920-mRNA-1 |
| chr7_2 | exon | 62860810 | 62861192 | 62860810 | ID=Msa1067920-mRNA-1:exon:12824;Parent=Msa1067920-mRNA-1 |
| chr7_2 | five_prime_UTR | 62861137 | 62861192 | 62861137 | ID=Msa1067920-mRNA-1:five_prime_utr;Parent=Msa1067920-mRNA-1 |
| chr7_2 | CDS | 62860810 | 62861136 | 62860810 | ID=Msa1067920-mRNA-1:cds;Parent=Msa1067920-mRNA-1 |
| chr7_2 | CDS | 62860497 | 62860548 | 62860497 | ID=Msa1067920-mRNA-1:cds;Parent=Msa1067920-mRNA-1 |
| chr7_2 | CDS | 62858048 | 62858162 | 62858048 | ID=Msa1067920-mRNA-1:cds;Parent=Msa1067920-mRNA-1 |
| chr7_2 | CDS | 62857903 | 62857973 | 62857903 | ID=Msa1067920-mRNA-1:cds;Parent=Msa1067920-mRNA-1 |
| chr7_2 | CDS | 62857638 | 62857725 | 62857638 | ID=Msa1067920-mRNA-1:cds;Parent=Msa1067920-mRNA-1 |
| chr7_2 | CDS | 62857245 | 62857368 | 62857245 | ID=Msa1067920-mRNA-1:cds;Parent=Msa1067920-mRNA-1 |
| chr7_2 | three_prime_UTR | 62857057 | 62857244 | 62857057 | ID=Msa1067920-mRNA-1:three_prime_utr;Parent=Msa1067920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
