AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1192150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1192150 MtrunA17_Chr8g0362351 95.918 392 12 2 1 388 1 392 0.0 766
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1192150 AT5G20220.2 62.606 353 119 5 44 386 37 386 3.54e-156 445
Msa1192150 AT5G20220.1 62.606 353 119 5 44 386 37 386 3.54e-156 445
Msa1192150 AT5G20220.4 62.606 353 119 5 44 386 53 402 6.58e-156 445
Msa1192150 AT5G20220.3 70.485 227 63 2 44 268 37 261 8.09e-115 336

Find 123 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAAAACCCTTGAGTTTC+TGG 0.052618 8_1:-37471238 None:intergenic
GAGTGTACCTGGGATGATTT+TGG 0.211736 8_1:-37466309 None:intergenic
AAAGAAATCTTTCATAGTTT+TGG 0.211900 8_1:-37470558 None:intergenic
TAATGTTGCATAATGAAATT+TGG 0.213394 8_1:+37471387 Msa1192150:three_prime_UTR
AGTACCTTTCCATTACATTT+TGG 0.230276 8_1:-37468019 None:intergenic
ACTAATTAGCATTACTTAAC+AGG 0.255394 8_1:-37471337 None:intergenic
TTTGCTAAATAGACCAGTTT+TGG 0.277779 8_1:-37469508 None:intergenic
ACAGCGAGTGGCTGCTATTA+AGG 0.292540 8_1:+37469569 Msa1192150:CDS
TGTAGGCTATGTGGCGAAAA+AGG 0.312373 8_1:+37470956 Msa1192150:CDS
GCTCTGGAGATTGTGTTATA+TGG 0.322319 8_1:+37468690 Msa1192150:CDS
ATCAAACCATCCTTCAGTTC+TGG 0.336795 8_1:-37470917 None:intergenic
TGTAAAATATGTCGACAATA+TGG 0.344909 8_1:+37471049 Msa1192150:CDS
GAGGGCATGTCCTTCGGTTA+TGG 0.346475 8_1:-37471072 None:intergenic
TGACGATGAAGTTGACAAAT+TGG 0.351646 8_1:+37469176 Msa1192150:CDS
TCGAGGCCAATAATCTGAAT+TGG 0.365874 8_1:+37471271 Msa1192150:three_prime_UTR
AGTCCTCCGGAGGATCTGTT+TGG 0.369092 8_1:+37466426 Msa1192150:CDS
CAGAGTCTCAATGCCAAAAC+TGG 0.372220 8_1:+37469495 Msa1192150:intron
CCCTTGAGTTTCTGGAAAGT+AGG 0.379478 8_1:-37471230 None:intergenic
GTGCCTGAAGCGTGGGATCC+TGG 0.381393 8_1:-37469548 None:intergenic
TTATAACTCTCCCATCACTA+TGG 0.402095 8_1:-37471015 None:intergenic
TCTTGCTGAAACTGTCCTCT+TGG 0.403692 8_1:-37470525 None:intergenic
GAAGAACATGCAGTAAGTTA+AGG 0.416372 8_1:+37470987 Msa1192150:CDS
CCACCAGGATCCCACGCTTC+AGG 0.416740 8_1:+37469545 Msa1192150:CDS
CTAATCTTCAATCCAACTTC+AGG 0.418320 8_1:-37469252 None:intergenic
TCTCTGATATATTGTCCATT+TGG 0.418495 8_1:-37467917 None:intergenic
CTGACATGCCACCAGTGCTC+TGG 0.438969 8_1:+37468674 Msa1192150:CDS
AGGTCTTGGTTTGGTCCAAA+TGG 0.439653 8_1:+37467902 Msa1192150:CDS
TAACTTGAGGGCATGTCCTT+CGG 0.450194 8_1:-37471078 None:intergenic
TACTGCATGTTCTTCTGTTG+TGG 0.452321 8_1:-37470979 None:intergenic
GTCCTCCGGAGGATCTGTTT+GGG 0.460836 8_1:+37466427 Msa1192150:CDS
TGAAATTTGGATGAAACAAA+TGG 0.466818 8_1:+37471400 Msa1192150:three_prime_UTR
AGTTATTTCAAATAAAAGAA+TGG 0.467754 8_1:+37471096 Msa1192150:CDS
ATGGGTGCTTTGAGGCTTGA+GGG 0.468115 8_1:-37466037 None:intergenic
CACTCGCTGTGCCTGAAGCG+TGG 0.469842 8_1:-37469556 None:intergenic
CAAGGTAAAGATGATGATGA+TGG 0.470764 8_1:-37466074 None:intergenic
TGAAGGATGGTTTGATTGAT+CGG 0.472656 8_1:+37470924 Msa1192150:CDS
TTGGCAAGAATTCATGAACT+TGG 0.472769 8_1:-37466151 None:intergenic
GTTATGTCATGGGTGCTTTG+AGG 0.475277 8_1:-37466045 None:intergenic
CACAAAACAGACAGGGGAAG+GGG 0.475532 8_1:-37466001 None:intergenic
ATACAAGAGAACCAAGGTCT+TGG 0.482088 8_1:+37467888 Msa1192150:CDS
TCGTCATCCTTCACTTTGAG+TGG 0.487889 8_1:-37469159 None:intergenic
CATGGGTGCTTTGAGGCTTG+AGG 0.492973 8_1:-37466038 None:intergenic
TAACCTCTTCCTCGGCAACT+TGG 0.494338 8_1:-37467950 None:intergenic
AGAGAACCAAGGTCTTGGTT+TGG 0.496454 8_1:+37467893 Msa1192150:CDS
TCAGACTGTCCAAAATGTAA+TGG 0.499235 8_1:+37468010 Msa1192150:CDS
CTCTGGAGATTGTGTTATAT+GGG 0.503966 8_1:+37468691 Msa1192150:CDS
CAGTCACCATCTCCTGAAGT+TGG 0.504263 8_1:+37469240 Msa1192150:CDS
TGTCCAAGTTGCCGAGGAAG+AGG 0.511181 8_1:+37467947 Msa1192150:CDS
ATGTCGATTGTGTCAGAAAG+AGG 0.511471 8_1:+37471144 Msa1192150:CDS
GGAGGATCTGTTTGGGCTAG+AGG 0.512278 8_1:+37466434 Msa1192150:CDS
CAACTTCAGGAGATGGTGAC+TGG 0.515872 8_1:-37469239 None:intergenic
TCCTACTTTCCAGAAACTCA+AGG 0.520528 8_1:+37471229 Msa1192150:three_prime_UTR
GTCACAAAACAGACAGGGGA+AGG 0.527034 8_1:-37466003 None:intergenic
TTGATCGGCGATTCACATGT+AGG 0.527264 8_1:+37470939 Msa1192150:CDS
TCTATTCCACATTCTGTACA+AGG 0.527806 8_1:-37467977 None:intergenic
AGAATTCATGAACTTGGAAG+TGG 0.529393 8_1:-37466145 None:intergenic
ACAGTTTAGGTACAGTCCTC+CGG 0.531585 8_1:+37466413 Msa1192150:intron
AAGATGATGATGATGGGAAA+TGG 0.533701 8_1:-37466067 None:intergenic
TTCAATCCAACTTCAGGAGA+TGG 0.534195 8_1:-37469246 None:intergenic
ACTCGCTGTGCCTGAAGCGT+GGG 0.534215 8_1:-37469555 None:intergenic
ACATGTCCTAGTAGAATAGT+TGG 0.534972 8_1:+37471181 Msa1192150:CDS
TTCCATCCCAAAATCATCCC+AGG 0.537995 8_1:+37466302 Msa1192150:CDS
GGAAATGTGAGAGAACGAAA+TGG 0.539000 8_1:-37466189 None:intergenic
TCTAGCCCAAACAGATCCTC+CGG 0.541042 8_1:-37466432 None:intergenic
GGTAGGAGGAGTCATTCATC+TGG 0.545110 8_1:+37471421 Msa1192150:three_prime_UTR
ATGGAGTGTGAATCACTAGT+TGG 0.547078 8_1:-37466170 None:intergenic
GACAATATGGCCATAACCGA+AGG 0.550578 8_1:+37471062 Msa1192150:CDS
AGAAAGAGGGACACAATAGT+AGG 0.553868 8_1:+37471158 Msa1192150:CDS
ATTGATTGAGCTCTCTCCCA+TGG 0.554307 8_1:-37468734 None:intergenic
CGTGTGGTCACAAAACAGAC+AGG 0.557389 8_1:-37466009 None:intergenic
GAGCAAAGGATGTTTGATGC+AGG 0.558118 8_1:-37466258 None:intergenic
CCTACTTTCCAGAAACTCAA+GGG 0.561754 8_1:+37471230 Msa1192150:three_prime_UTR
TTTGGACCAAACCAAGACCT+TGG 0.562522 8_1:-37467899 None:intergenic
TCAGTGCCAACTATTCTACT+AGG 0.563675 8_1:-37471187 None:intergenic
CACAATCTCCAGAGCACTGG+TGG 0.564699 8_1:-37468682 None:intergenic
TGGTGACTGGTAAACACGCT+TGG 0.567083 8_1:-37469226 None:intergenic
AGGATGAAAATGACCTTGCA+TGG 0.569093 8_1:-37470615 None:intergenic
TGTTTGATGCAGGAAGGGAA+AGG 0.573155 8_1:-37466248 None:intergenic
AGGCTTGAGGGTTAAACGTG+TGG 0.573543 8_1:-37466025 None:intergenic
TATACTCCTTGTACAGAATG+TGG 0.578563 8_1:+37467971 Msa1192150:CDS
TAAGGATAAGCCATAGTGAT+GGG 0.578892 8_1:+37471005 Msa1192150:CDS
AAAGGATGTTTGATGCAGGA+AGG 0.579761 8_1:-37466254 None:intergenic
ACTGTGGACGTGAAGGACAT+AGG 0.580715 8_1:+37470882 Msa1192150:CDS
AGTCGATTGATGAACGACCA+TGG 0.584974 8_1:+37468717 Msa1192150:CDS
GTCGATTGATGAACGACCAT+GGG 0.585311 8_1:+37468718 Msa1192150:CDS
AAGGTAAAGATGATGATGAT+GGG 0.587252 8_1:-37466073 None:intergenic
ACACTACTGTCCAGAACTGA+AGG 0.588135 8_1:+37470907 Msa1192150:CDS
TTATGCAACATTAAACCTAG+TGG 0.588685 8_1:-37471377 None:intergenic
TCACAAAACAGACAGGGGAA+GGG 0.591214 8_1:-37466002 None:intergenic
AAAAGGAGCATGGCCATGCA+AGG 0.593193 8_1:+37470602 Msa1192150:CDS
TTAAGGATAAGCCATAGTGA+TGG 0.593339 8_1:+37471004 Msa1192150:CDS
ATGGGAAATGGTTATGTCAT+GGG 0.594070 8_1:-37466055 None:intergenic
AAGGAGTATAACCTCTTCCT+CGG 0.598005 8_1:-37467958 None:intergenic
TAACACAATCTCCAGAGCAC+TGG 0.599406 8_1:-37468685 None:intergenic
ACGAATGAAGATCATCCACC+AGG 0.599645 8_1:+37469530 Msa1192150:CDS
TAGATCTCCACTCAAAGTGA+AGG 0.599759 8_1:+37469152 Msa1192150:intron
AAGGATGTTTGATGCAGGAA+GGG 0.600279 8_1:-37466253 None:intergenic
TGTCGATTGTGTCAGAAAGA+GGG 0.600299 8_1:+37471145 Msa1192150:CDS
GGATCTGTTTGGGCTAGAGG+TGG 0.600674 8_1:+37466437 Msa1192150:CDS
AAAGGAAGAGATGAATGTTG+AGG 0.601741 8_1:-37466230 None:intergenic
CATCATTGAGTGAAGAGCAA+AGG 0.602020 8_1:-37466272 None:intergenic
CTTCCTCGGCAACTTGGACA+AGG 0.602368 8_1:-37467944 None:intergenic
AATGTGGAATAGAACGATCT+AGG 0.605176 8_1:+37467987 Msa1192150:CDS
TGTCAAAACTGTGGACGTGA+AGG 0.607699 8_1:+37470875 Msa1192150:CDS
ATTTGGATGAAACAAATGGT+AGG 0.608675 8_1:+37471404 Msa1192150:three_prime_UTR
TGGATGAAACAAATGGTAGG+AGG 0.611399 8_1:+37471407 Msa1192150:three_prime_UTR
CTGTCCAAAATGTAATGGAA+AGG 0.611504 8_1:+37468015 Msa1192150:CDS
CGATTCACATGTAGGCTATG+TGG 0.611826 8_1:+37470947 Msa1192150:CDS
TAGAGGTGGAATTCAAGCCA+AGG 0.619292 8_1:+37466451 Msa1192150:CDS
GATGGGAAATGGTTATGTCA+TGG 0.624295 8_1:-37466056 None:intergenic
TACTGTCCAGAACTGAAGGA+TGG 0.635638 8_1:+37470911 Msa1192150:CDS
CTACCTTGTCCAAGTTGCCG+AGG 0.637462 8_1:+37467941 Msa1192150:CDS
AAACTTGTTAGATATCCACT+AGG 0.650927 8_1:+37471362 Msa1192150:three_prime_UTR
GTGTGGTCACAAAACAGACA+GGG 0.664403 8_1:-37466008 None:intergenic
CCTGAAGCGTGGGATCCTGG+TGG 0.677351 8_1:-37469545 None:intergenic
AAGAGATGAATGTTGAGGTG+AGG 0.680395 8_1:-37466225 None:intergenic
GATGAATGCAGAAAGCCAAG+AGG 0.685841 8_1:+37470510 Msa1192150:intron
AGCCCAAACAGATCCTCCGG+AGG 0.688257 8_1:-37466429 None:intergenic
AAATTCTATTGTCAAAACTG+TGG 0.691239 8_1:+37470866 Msa1192150:CDS
ACAGGGGAAGGGGATAACGA+TGG 0.695490 8_1:-37465991 None:intergenic
TGTGGTCACAAAACAGACAG+GGG 0.716112 8_1:-37466007 None:intergenic
TTTGAACATATATCTCATCG+AGG 0.722344 8_1:+37471254 Msa1192150:three_prime_UTR
ACTCTCATACAAGAGAACCA+AGG 0.725787 8_1:+37467882 Msa1192150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAATTTCTAAATGT+TGG + chr8_1:37467730-37467749 Msa1192150:intron 10.0%
!! TATATCAACATATTTATAAA+TGG - chr8_1:37469906-37469925 None:intergenic 10.0%
!! AAAAAGAAGAACAAATATTT+CGG - chr8_1:37465965-37465984 None:intergenic 15.0%
!! AAAAAAAAAAAAAAGAATCC+TGG - chr8_1:37466652-37466671 None:intergenic 15.0%
!!! GATTCTTTTTTTTTTTTTTG+AGG + chr8_1:37466653-37466672 Msa1192150:intron 15.0%
!!! ATAAGAAATTGCAAAAATTT+TGG + chr8_1:37467044-37467063 Msa1192150:intron 15.0%
!!! TAAGAAATTGCAAAAATTTT+GGG + chr8_1:37467045-37467064 Msa1192150:intron 15.0%
!! TTTCTCATTATAAATTATAG+TGG + chr8_1:37467196-37467215 Msa1192150:intron 15.0%
!! TGGCATTATTAATATTAAAA+TGG + chr8_1:37467216-37467235 Msa1192150:intron 15.0%
!! GGCATTATTAATATTAAAAT+GGG + chr8_1:37467217-37467236 Msa1192150:intron 15.0%
!! GCATTATTAATATTAAAATG+GGG + chr8_1:37467218-37467237 Msa1192150:intron 15.0%
!! TCTCAATTAAATTAAGTTTA+TGG - chr8_1:37468405-37468424 None:intergenic 15.0%
!!! CTATGATTTTAGTTTTAATT+AGG + chr8_1:37470172-37470191 Msa1192150:intron 15.0%
!!! TTTTATTTGAAATAACTTGA+GGG - chr8_1:37471093-37471112 None:intergenic 15.0%
!!! AGTTATTTCAAATAAAAGAA+TGG + chr8_1:37471096-37471115 Msa1192150:CDS 15.0%
!! GTTAGAAGTTTAAACAATAT+GGG - chr8_1:37466364-37466383 None:intergenic 20.0%
!! TGTTAGAAGTTTAAACAATA+TGG - chr8_1:37466365-37466384 None:intergenic 20.0%
!! TTGTTTAAACTTCTAACATT+TGG + chr8_1:37466367-37466386 Msa1192150:intron 20.0%
!! TATATATAAAATTGAGACCT+TGG - chr8_1:37466471-37466490 None:intergenic 20.0%
!! ATCACAAATAATGAGTTTAA+TGG + chr8_1:37466528-37466547 Msa1192150:intron 20.0%
!!! TGACATTGAAAAACTATTTT+AGG - chr8_1:37466568-37466587 None:intergenic 20.0%
!!! TTTTTTTTTTTGAGGAAAAG+TGG + chr8_1:37466661-37466680 Msa1192150:intron 20.0%
!! TATATAAACCCCTATAAATT+GGG - chr8_1:37467006-37467025 None:intergenic 20.0%
!! TTATATAAACCCCTATAAAT+TGG - chr8_1:37467007-37467026 None:intergenic 20.0%
!! GGTTTATATAAGAAATTCAA+GGG + chr8_1:37467016-37467035 Msa1192150:intron 20.0%
!! CAAGCATAATAATAAAAATG+TGG - chr8_1:37467339-37467358 None:intergenic 20.0%
!! CAAGCATAATAATAAAAAAG+TGG - chr8_1:37467383-37467402 None:intergenic 20.0%
!!! GTATCAATTTTTTTTATGCT+AGG + chr8_1:37467405-37467424 Msa1192150:intron 20.0%
!! CAAGCATAATAATAAAAATG+TGG - chr8_1:37467339-37467358 None:intergenic 20.0%
!!! GTATCAATTTTTTTTATGCT+AGG + chr8_1:37467405-37467424 Msa1192150:intron 20.0%
!!! AATGTTGGTAAGAATAAAAT+TGG + chr8_1:37467745-37467764 Msa1192150:intron 20.0%
!!! TCTAAGATATCTTGAAATTA+AGG + chr8_1:37468221-37468240 Msa1192150:intron 20.0%
!! AGGAAAAAAAAAAGGAAAAA+GGG - chr8_1:37468636-37468655 None:intergenic 20.0%
!! AAGGAAAAAAAAAAGGAAAA+AGG - chr8_1:37468637-37468656 None:intergenic 20.0%
!! TCAAATGAAGGAAAAAAAAA+AGG - chr8_1:37468644-37468663 None:intergenic 20.0%
!!! AAATCCTGTTTTTAATCAAA+AGG - chr8_1:37469422-37469441 None:intergenic 20.0%
!!! TTTTTTTATACATGCAGTTT+AGG + chr8_1:37469827-37469846 Msa1192150:intron 20.0%
!! GATAAACAGAATATCTTTAA+AGG + chr8_1:37470053-37470072 Msa1192150:intron 20.0%
!!! ATTTTAGTTTTAATTAGGCA+AGG + chr8_1:37470177-37470196 Msa1192150:intron 20.0%
!!! TTTTAGTTTTAATTAGGCAA+GGG + chr8_1:37470178-37470197 Msa1192150:intron 20.0%
!!! AAAGAAATCTTTCATAGTTT+TGG - chr8_1:37470561-37470580 None:intergenic 20.0%
!! TCTCAAAAGTTAAAATAAAC+AGG - chr8_1:37470650-37470669 None:intergenic 20.0%
!!! CTTTTATTTGAAATAACTTG+AGG - chr8_1:37471094-37471113 None:intergenic 20.0%
!! TAATGTTGCATAATGAAATT+TGG + chr8_1:37471387-37471406 Msa1192150:three_prime_UTR 20.0%
!!! TGATGTTTTTGTAACAGTTT+AGG + chr8_1:37466400-37466419 Msa1192150:intron 25.0%
! ACAAATAATGAGTTTAATGG+AGG + chr8_1:37466531-37466550 Msa1192150:intron 25.0%
! TATATGCTTATATAGCAACA+TGG - chr8_1:37466606-37466625 None:intergenic 25.0%
! AAAAGTTGTGACACATTTAT+AGG + chr8_1:37466717-37466736 Msa1192150:intron 25.0%
! AAAGTTGTGACACATTTATA+GGG + chr8_1:37466718-37466737 Msa1192150:intron 25.0%
! AATTTCTTATGTAAACCAAG+GGG - chr8_1:37466951-37466970 None:intergenic 25.0%
! CAATTTCTTATGTAAACCAA+GGG - chr8_1:37466952-37466971 None:intergenic 25.0%
! AAAGAAATTGCCCAATTTAT+AGG + chr8_1:37466993-37467012 Msa1192150:intron 25.0%
! AAGAAATTGCCCAATTTATA+GGG + chr8_1:37466994-37467013 Msa1192150:intron 25.0%
! GGGTTTATATAAGAAATTCA+AGG + chr8_1:37467015-37467034 Msa1192150:intron 25.0%
! TTAATATTAAAATGGGGATG+TGG + chr8_1:37467224-37467243 Msa1192150:intron 25.0%
!! ATTATGATTTGAAGTTGACA+AGG + chr8_1:37467833-37467852 Msa1192150:intron 25.0%
! AACAAAACACAATTTCAACT+TGG + chr8_1:37468070-37468089 Msa1192150:intron 25.0%
! ATCTTAGACAGAAATACTAT+AGG - chr8_1:37468209-37468228 None:intergenic 25.0%
!! TGCTTAGTATTTTCCAATAT+TGG + chr8_1:37468563-37468582 Msa1192150:intron 25.0%
! TTATCAACTACTACCAATAT+TGG - chr8_1:37468579-37468598 None:intergenic 25.0%
!!! GTAGTAGTTGATAAACATTA+TGG + chr8_1:37468585-37468604 Msa1192150:intron 25.0%
!!! TTTTTTTCCTTCATTTGAAC+AGG + chr8_1:37468646-37468665 Msa1192150:intron 25.0%
!!! TTTTTTCCTTCATTTGAACA+GGG + chr8_1:37468647-37468666 Msa1192150:intron 25.0%
!! TAAAATAAAAACAAAAGCGC+TGG - chr8_1:37468908-37468927 None:intergenic 25.0%
! TAGAAATTTATGACATCACA+AGG - chr8_1:37468981-37469000 None:intergenic 25.0%
! AATACAGAATATTTCGTCAT+TGG + chr8_1:37469106-37469125 Msa1192150:intron 25.0%
!!! TCATTGGTTTTTTACCATTT+TGG + chr8_1:37469122-37469141 Msa1192150:intron 25.0%
! AGATCTAAGAATAACCAAAA+TGG - chr8_1:37469139-37469158 None:intergenic 25.0%
! AATCAAAAGGAAAGAGAAAA+AGG - chr8_1:37469409-37469428 None:intergenic 25.0%
!!! CTTTCCTTTTGATTAAAAAC+AGG + chr8_1:37469415-37469434 Msa1192150:intron 25.0%
! TAAATTTGCATTCTTAGCAA+CGG - chr8_1:37469449-37469468 None:intergenic 25.0%
! TTAGGACTATACATTCAATT+TGG + chr8_1:37469845-37469864 Msa1192150:intron 25.0%
! TATAATGTCATGTCTATCTT+AGG - chr8_1:37469875-37469894 None:intergenic 25.0%
! AACACATGTAGAACAAAAAA+AGG - chr8_1:37470235-37470254 None:intergenic 25.0%
! AAAAGAAAATTATTCAGGCA+TGG - chr8_1:37470315-37470334 None:intergenic 25.0%
! CACAGAAAAGAAAATTATTC+AGG - chr8_1:37470320-37470339 None:intergenic 25.0%
! TTCTGTGAGCATAAATTATT+TGG + chr8_1:37470333-37470352 Msa1192150:intron 25.0%
! ATACTTGCATAATTTATCAC+AGG - chr8_1:37470436-37470455 None:intergenic 25.0%
!! AAATAAACAGGCTATTTCAA+AGG - chr8_1:37470638-37470657 None:intergenic 25.0%
! AAATTCTATTGTCAAAACTG+TGG + chr8_1:37470866-37470885 Msa1192150:CDS 25.0%
! TGTAAAATATGTCGACAATA+TGG + chr8_1:37471049-37471068 Msa1192150:CDS 25.0%
!! GATTTTCCAATTCAGATTAT+TGG - chr8_1:37471280-37471299 None:intergenic 25.0%
! ACTAATTAGCATTACTTAAC+AGG - chr8_1:37471340-37471359 None:intergenic 25.0%
! TGAAATTTGGATGAAACAAA+TGG + chr8_1:37471400-37471419 Msa1192150:three_prime_UTR 25.0%
! AAGGTAAAGATGATGATGAT+GGG - chr8_1:37466076-37466095 None:intergenic 30.0%
CAGTAAAAAAGAGTAGATAG+TGG - chr8_1:37466341-37466360 None:intergenic 30.0%
!!! TTTTTTTTGAGGAAAAGTGG+CGG + chr8_1:37466664-37466683 Msa1192150:intron 30.0%
TCCAAACTTTATAAGAATCC+TGG - chr8_1:37466692-37466711 None:intergenic 30.0%
AAGTTGTGACACATTTATAG+GGG + chr8_1:37466719-37466738 Msa1192150:intron 30.0%
ACATTTATAGGGGTTTACTA+GGG + chr8_1:37466729-37466748 Msa1192150:intron 30.0%
GCAATTTCTTATGTAAACCA+AGG - chr8_1:37466953-37466972 None:intergenic 30.0%
AGAAATTGCCCAATTTATAG+GGG + chr8_1:37466995-37467014 Msa1192150:intron 30.0%
! AAATTGCAAAAATTTTGGGC+CGG + chr8_1:37467049-37467068 Msa1192150:intron 30.0%
AATGAAATTTGAGAAACCGT+TGG - chr8_1:37467131-37467150 None:intergenic 30.0%
AACGGTTTCTCAAATTTCAT+TGG + chr8_1:37467130-37467149 Msa1192150:intron 30.0%
GTAAAACTAATTTACACCGA+CGG + chr8_1:37467161-37467180 Msa1192150:intron 30.0%
! GAAATTTTCACAAGCTTCAT+TGG - chr8_1:37467686-37467705 None:intergenic 30.0%
!! AAGGTCCACATTTTTATTTC+AGG + chr8_1:37467852-37467871 Msa1192150:intron 30.0%
GCTTTCCTGAAATAAAAATG+TGG - chr8_1:37467860-37467879 None:intergenic 30.0%
TCTCTGATATATTGTCCATT+TGG - chr8_1:37467920-37467939 None:intergenic 30.0%
! AGTACCTTTCCATTACATTT+TGG - chr8_1:37468022-37468041 None:intergenic 30.0%
!! TTCAACTTGGTCTTATTAGA+AGG + chr8_1:37468083-37468102 Msa1192150:intron 30.0%
!! TCAACTTGGTCTTATTAGAA+GGG + chr8_1:37468084-37468103 Msa1192150:intron 30.0%
AAACTTATACAAGCACCAAT+CGG - chr8_1:37468309-37468328 None:intergenic 30.0%
CTATCATCTATATGCTTCTA+AGG + chr8_1:37468357-37468376 Msa1192150:intron 30.0%
TTTATCTTCGATTAACTCCT+TGG + chr8_1:37468796-37468815 Msa1192150:intron 30.0%
ACATCTTAACAACATTTCCA+AGG - chr8_1:37468816-37468835 None:intergenic 30.0%
TATGATAGTCGTTAACATAC+TGG + chr8_1:37469001-37469020 Msa1192150:intron 30.0%
! AGTTTTTGAATCGTGCAAAA+TGG + chr8_1:37469068-37469087 Msa1192150:intron 30.0%
! TTGCTGCTTAATCTCAATTA+TGG + chr8_1:37469294-37469313 Msa1192150:intron 30.0%
!! CTTTTTCATGTTATGCATAG+AGG + chr8_1:37469344-37469363 Msa1192150:intron 30.0%
! TTTGCTAAATAGACCAGTTT+TGG - chr8_1:37469511-37469530 None:intergenic 30.0%
! TTCACTTGATTTGATCTATG+AGG + chr8_1:37469745-37469764 Msa1192150:intron 30.0%
!! GCACGTCAAAAAGTTATTTT+TGG - chr8_1:37469801-37469820 None:intergenic 30.0%
TCACACATATATTTGCACTT+TGG - chr8_1:37469934-37469953 None:intergenic 30.0%
TAGAGCGTATATATTCATGT+TGG - chr8_1:37470080-37470099 None:intergenic 30.0%
! CATTTGAGTTTGATTAAGCT+AGG - chr8_1:37470141-37470160 None:intergenic 30.0%
CTAGCTTAATCAAACTCAAA+TGG + chr8_1:37470139-37470158 Msa1192150:intron 30.0%
!! TTTTAATTAGGCAAGGGAAT+AGG + chr8_1:37470184-37470203 Msa1192150:intron 30.0%
TTTAATTAGGCAAGGGAATA+GGG + chr8_1:37470185-37470204 Msa1192150:intron 30.0%
!! ACAAAAAAAGGTATTTGCTC+TGG - chr8_1:37470223-37470242 None:intergenic 30.0%
ATCCAATAAACCGTGAAAAA+AGG + chr8_1:37470585-37470604 Msa1192150:CDS 30.0%
TTTCATTCCTATTCTAATGC+AGG + chr8_1:37470839-37470858 Msa1192150:intron 30.0%
TTTGAACATATATCTCATCG+AGG + chr8_1:37471254-37471273 Msa1192150:three_prime_UTR 30.0%
!! AAACTTGTTAGATATCCACT+AGG + chr8_1:37471362-37471381 Msa1192150:three_prime_UTR 30.0%
TTATGCAACATTAAACCTAG+TGG - chr8_1:37471380-37471399 None:intergenic 30.0%
ATTTGGATGAAACAAATGGT+AGG + chr8_1:37471404-37471423 Msa1192150:three_prime_UTR 30.0%
ATGGGAAATGGTTATGTCAT+GGG - chr8_1:37466058-37466077 None:intergenic 35.0%
!! AAGATGATGATGATGGGAAA+TGG - chr8_1:37466070-37466089 None:intergenic 35.0%
! CAAGGTAAAGATGATGATGA+TGG - chr8_1:37466077-37466096 None:intergenic 35.0%
!! GTGTGTTTGTTTTCTCAACA+AGG - chr8_1:37466095-37466114 None:intergenic 35.0%
AGAATTCATGAACTTGGAAG+TGG - chr8_1:37466148-37466167 None:intergenic 35.0%
TTGGCAAGAATTCATGAACT+TGG - chr8_1:37466154-37466173 None:intergenic 35.0%
AAAGGAAGAGATGAATGTTG+AGG - chr8_1:37466233-37466252 None:intergenic 35.0%
! ATGAGTTTAATGGAGGTACA+TGG + chr8_1:37466538-37466557 Msa1192150:intron 35.0%
TGCTTATATAGCAACATGGT+CGG - chr8_1:37466602-37466621 None:intergenic 35.0%
GCCAGGATTCTTATAAAGTT+TGG + chr8_1:37466688-37466707 Msa1192150:intron 35.0%
CACATTTATAGGGGTTTACT+AGG + chr8_1:37466728-37466747 Msa1192150:intron 35.0%
GAAAATAGAACATGTACCGT+CGG - chr8_1:37467180-37467199 None:intergenic 35.0%
ATAGATAGACATTGGAGATG+CGG - chr8_1:37467302-37467321 None:intergenic 35.0%
AAAATGTGGATAGATAGACG+TGG - chr8_1:37467325-37467344 None:intergenic 35.0%
AAAATGTGGATAGATAGACG+TGG - chr8_1:37467325-37467344 None:intergenic 35.0%
TCTATATCCATACGTGTAAG+TGG - chr8_1:37467800-37467819 None:intergenic 35.0%
TATACTCCTTGTACAGAATG+TGG + chr8_1:37467971-37467990 Msa1192150:CDS 35.0%
TCTATTCCACATTCTGTACA+AGG - chr8_1:37467980-37467999 None:intergenic 35.0%
AATGTGGAATAGAACGATCT+AGG + chr8_1:37467987-37468006 Msa1192150:CDS 35.0%
TCAGACTGTCCAAAATGTAA+TGG + chr8_1:37468010-37468029 Msa1192150:CDS 35.0%
! CTGTCCAAAATGTAATGGAA+AGG + chr8_1:37468015-37468034 Msa1192150:CDS 35.0%
!!! CAAGATTTTCAGAGGCATTT+TGG - chr8_1:37468146-37468165 None:intergenic 35.0%
! CAAAATGCCTCTGAAAATCT+TGG + chr8_1:37468144-37468163 Msa1192150:intron 35.0%
! GAACTAACCAAGATTTTCAG+AGG - chr8_1:37468154-37468173 None:intergenic 35.0%
!!! CTATGATTGTTTTAGCCGAT+TGG + chr8_1:37468291-37468310 Msa1192150:intron 35.0%
! AGATGAACATTTCGAGTCAA+TGG + chr8_1:37468506-37468525 Msa1192150:intron 35.0%
! CTCTGGAGATTGTGTTATAT+GGG + chr8_1:37468691-37468710 Msa1192150:CDS 35.0%
!! AAAACAAAAGCGCTGGTAAT+GGG - chr8_1:37468901-37468920 None:intergenic 35.0%
!! AAAAACAAAAGCGCTGGTAA+TGG - chr8_1:37468902-37468921 None:intergenic 35.0%
TGACGATGAAGTTGACAAAT+TGG + chr8_1:37469176-37469195 Msa1192150:CDS 35.0%
CTAATCTTCAATCCAACTTC+AGG - chr8_1:37469255-37469274 None:intergenic 35.0%
ACTTGTATTTCGTTTGAGCT+TGG + chr8_1:37469606-37469625 Msa1192150:intron 35.0%
CACATATATTTGCACTTTGG+AGG - chr8_1:37469931-37469950 None:intergenic 35.0%
! TGTCACCTTTTCCATCAAAT+TGG + chr8_1:37469971-37469990 Msa1192150:intron 35.0%
GTAAGCACACATAAATGACA+TGG + chr8_1:37470370-37470389 Msa1192150:intron 35.0%
!!! CTCCTTTTTTCACGGTTTAT+TGG - chr8_1:37470590-37470609 None:intergenic 35.0%
!! ACTTTTGAGAAGTCTCAAAC+AGG + chr8_1:37470660-37470679 Msa1192150:intron 35.0%
CTGATTGAAGTGGAAGTAAA+TGG - chr8_1:37470791-37470810 None:intergenic 35.0%
CATTTACTTCCACTTCAATC+AGG + chr8_1:37470789-37470808 Msa1192150:intron 35.0%
TTTCACACCTGCATTAGAAT+AGG - chr8_1:37470849-37470868 None:intergenic 35.0%
TGAAGGATGGTTTGATTGAT+CGG + chr8_1:37470924-37470943 Msa1192150:CDS 35.0%
GAAGAACATGCAGTAAGTTA+AGG + chr8_1:37470987-37471006 Msa1192150:CDS 35.0%
TTAAGGATAAGCCATAGTGA+TGG + chr8_1:37471004-37471023 Msa1192150:CDS 35.0%
TAAGGATAAGCCATAGTGAT+GGG + chr8_1:37471005-37471024 Msa1192150:CDS 35.0%
TTATAACTCTCCCATCACTA+TGG - chr8_1:37471018-37471037 None:intergenic 35.0%
ACATGTCCTAGTAGAATAGT+TGG + chr8_1:37471181-37471200 Msa1192150:CDS 35.0%
GATGGGAAATGGTTATGTCA+TGG - chr8_1:37466059-37466078 None:intergenic 40.0%
ATGGAGTGTGAATCACTAGT+TGG - chr8_1:37466173-37466192 None:intergenic 40.0%
GGAAATGTGAGAGAACGAAA+TGG - chr8_1:37466192-37466211 None:intergenic 40.0%
AAGAGATGAATGTTGAGGTG+AGG - chr8_1:37466228-37466247 None:intergenic 40.0%
AAGGATGTTTGATGCAGGAA+GGG - chr8_1:37466256-37466275 None:intergenic 40.0%
AAAGGATGTTTGATGCAGGA+AGG - chr8_1:37466257-37466276 None:intergenic 40.0%
CATCATTGAGTGAAGAGCAA+AGG - chr8_1:37466275-37466294 None:intergenic 40.0%
!!! GGATGATTTTGGGATGGAAA+AGG - chr8_1:37466301-37466320 None:intergenic 40.0%
! AGTGTACCTGGGATGATTTT+GGG - chr8_1:37466311-37466330 None:intergenic 40.0%
! GTGGAAAAAAGAGTGTACCT+GGG - chr8_1:37466322-37466341 None:intergenic 40.0%
! AGTGGAAAAAAGAGTGTACC+TGG - chr8_1:37466323-37466342 None:intergenic 40.0%
! GTTTAATGGAGGTACATGGA+CGG + chr8_1:37466542-37466561 Msa1192150:intron 40.0%
ATATATTGTAACCGCACCAG+TGG + chr8_1:37466621-37466640 Msa1192150:intron 40.0%
TTATAGGGGTTTACTAGGGA+TGG + chr8_1:37466733-37466752 Msa1192150:intron 40.0%
GTTTACTAGGGATGGCAATA+CGG + chr8_1:37466741-37466760 Msa1192150:intron 40.0%
TTTACTAGGGATGGCAATAC+GGG + chr8_1:37466742-37466761 Msa1192150:intron 40.0%
!!! TGTTTTTGGCGGACTAATAG+CGG - chr8_1:37466773-37466792 None:intergenic 40.0%
CTATTAGTCCGCCAAAAACA+GGG + chr8_1:37466773-37466792 Msa1192150:intron 40.0%
TTCTTATGTAAACCAAGGGG+TGG - chr8_1:37466948-37466967 None:intergenic 40.0%
! AAAAATTTTGGGCCGGAGTT+AGG + chr8_1:37467056-37467075 Msa1192150:intron 40.0%
! AAAATTTTGGGCCGGAGTTA+GGG + chr8_1:37467057-37467076 Msa1192150:intron 40.0%
GAAATTTGAGAAACCGTTGG+TGG - chr8_1:37467128-37467147 None:intergenic 40.0%
TAGATAGACATTGGAGATGC+GGG - chr8_1:37467301-37467320 None:intergenic 40.0%
AGACGTGGATAGATAGACAT+TGG - chr8_1:37467310-37467329 None:intergenic 40.0%
TGTATCTCCACTTACACGTA+TGG + chr8_1:37467790-37467809 Msa1192150:intron 40.0%
ACTCTCATACAAGAGAACCA+AGG + chr8_1:37467882-37467901 Msa1192150:CDS 40.0%
ATACAAGAGAACCAAGGTCT+TGG + chr8_1:37467888-37467907 Msa1192150:CDS 40.0%
! AAGGAGTATAACCTCTTCCT+CGG - chr8_1:37467961-37467980 None:intergenic 40.0%
AGCAAACCCTGTTCAAATGA+AGG - chr8_1:37468656-37468675 None:intergenic 40.0%
!! GCTCTGGAGATTGTGTTATA+TGG + chr8_1:37468690-37468709 Msa1192150:CDS 40.0%
TAGATCTCCACTCAAAGTGA+AGG + chr8_1:37469152-37469171 Msa1192150:intron 40.0%
TTCAATCCAACTTCAGGAGA+TGG - chr8_1:37469249-37469268 None:intergenic 40.0%
CAGTGCCAATTTGATGGAAA+AGG - chr8_1:37469979-37469998 None:intergenic 40.0%
GAGTTTGATTAAGCTAGGAC+TGG - chr8_1:37470136-37470155 None:intergenic 40.0%
!! ACCACTTGAGTATTGGCATA+AGG + chr8_1:37470401-37470420 Msa1192150:intron 40.0%
AAACCGTGAAAAAAGGAGCA+TGG + chr8_1:37470592-37470611 Msa1192150:CDS 40.0%
AGGATGAAAATGACCTTGCA+TGG - chr8_1:37470618-37470637 None:intergenic 40.0%
ACTAGTAGTCCATGAGAATC+CGG + chr8_1:37470685-37470704 Msa1192150:intron 40.0%
TTGTTTACTAGTAGTCCAGG+AGG - chr8_1:37470759-37470778 None:intergenic 40.0%
! CTCTTGTTTACTAGTAGTCC+AGG - chr8_1:37470762-37470781 None:intergenic 40.0%
ATCAAACCATCCTTCAGTTC+TGG - chr8_1:37470920-37470939 None:intergenic 40.0%
TACTGCATGTTCTTCTGTTG+TGG - chr8_1:37470982-37471001 None:intergenic 40.0%
! ATGTCGATTGTGTCAGAAAG+AGG + chr8_1:37471144-37471163 Msa1192150:CDS 40.0%
! TGTCGATTGTGTCAGAAAGA+GGG + chr8_1:37471145-37471164 Msa1192150:CDS 40.0%
AGAAAGAGGGACACAATAGT+AGG + chr8_1:37471158-37471177 Msa1192150:CDS 40.0%
TCAGTGCCAACTATTCTACT+AGG - chr8_1:37471190-37471209 None:intergenic 40.0%
TCCTACTTTCCAGAAACTCA+AGG + chr8_1:37471229-37471248 Msa1192150:three_prime_UTR 40.0%
CCTACTTTCCAGAAACTCAA+GGG + chr8_1:37471230-37471249 Msa1192150:three_prime_UTR 40.0%
GTTCAAAACCCTTGAGTTTC+TGG - chr8_1:37471241-37471260 None:intergenic 40.0%
TCGAGGCCAATAATCTGAAT+TGG + chr8_1:37471271-37471290 Msa1192150:three_prime_UTR 40.0%
TGGATGAAACAAATGGTAGG+AGG + chr8_1:37471407-37471426 Msa1192150:three_prime_UTR 40.0%
TCACAAAACAGACAGGGGAA+GGG - chr8_1:37466005-37466024 None:intergenic 45.0%
TGTGGTCACAAAACAGACAG+GGG - chr8_1:37466010-37466029 None:intergenic 45.0%
GTGTGGTCACAAAACAGACA+GGG - chr8_1:37466011-37466030 None:intergenic 45.0%
GTTATGTCATGGGTGCTTTG+AGG - chr8_1:37466048-37466067 None:intergenic 45.0%
!! AGGTGAGGTGTTTTTGTGCA+TGG - chr8_1:37466213-37466232 None:intergenic 45.0%
TGTTTGATGCAGGAAGGGAA+AGG - chr8_1:37466251-37466270 None:intergenic 45.0%
GAGCAAAGGATGTTTGATGC+AGG - chr8_1:37466261-37466280 None:intergenic 45.0%
TTCCATCCCAAAATCATCCC+AGG + chr8_1:37466302-37466321 Msa1192150:CDS 45.0%
!! TACCTGGGATGATTTTGGGA+TGG - chr8_1:37466307-37466326 None:intergenic 45.0%
! GAGTGTACCTGGGATGATTT+TGG - chr8_1:37466312-37466331 None:intergenic 45.0%
ACAGTTTAGGTACAGTCCTC+CGG + chr8_1:37466413-37466432 Msa1192150:intron 45.0%
TAGAGGTGGAATTCAAGCCA+AGG + chr8_1:37466451-37466470 Msa1192150:CDS 45.0%
!!! GTTTTTGGCGGACTAATAGC+GGG - chr8_1:37466772-37466791 None:intergenic 45.0%
GCTATTAGTCCGCCAAAAAC+AGG + chr8_1:37466772-37466791 Msa1192150:intron 45.0%
!! TTTAACCCGCCATTTTAGGC+GGG - chr8_1:37466907-37466926 None:intergenic 45.0%
!! GTTTAACCCGCCATTTTAGG+CGG - chr8_1:37466908-37466927 None:intergenic 45.0%
!! GCCTAAAATGGCGGGTTAAA+CGG + chr8_1:37466907-37466926 Msa1192150:intron 45.0%
!! CCTAAAATGGCGGGTTAAAC+GGG + chr8_1:37466908-37466927 Msa1192150:intron 45.0%
TAAACCAAGGGGTGGCAAAA+CGG - chr8_1:37466940-37466959 None:intergenic 45.0%
AGATAGACATTGGAGATGCG+GGG - chr8_1:37467300-37467319 None:intergenic 45.0%
AGAGAACCAAGGTCTTGGTT+TGG + chr8_1:37467893-37467912 Msa1192150:CDS 45.0%
TTTGGACCAAACCAAGACCT+TGG - chr8_1:37467902-37467921 None:intergenic 45.0%
!! AGGTCTTGGTTTGGTCCAAA+TGG + chr8_1:37467902-37467921 Msa1192150:CDS 45.0%
TAACACAATCTCCAGAGCAC+TGG - chr8_1:37468688-37468707 None:intergenic 45.0%
AGTCGATTGATGAACGACCA+TGG + chr8_1:37468717-37468736 Msa1192150:CDS 45.0%
GTCGATTGATGAACGACCAT+GGG + chr8_1:37468718-37468737 Msa1192150:CDS 45.0%
ATTGATTGAGCTCTCTCCCA+TGG - chr8_1:37468737-37468756 None:intergenic 45.0%
TCGTCATCCTTCACTTTGAG+TGG - chr8_1:37469162-37469181 None:intergenic 45.0%
CAGAGTCTCAATGCCAAAAC+TGG + chr8_1:37469495-37469514 Msa1192150:intron 45.0%
ACGAATGAAGATCATCCACC+AGG + chr8_1:37469530-37469549 Msa1192150:CDS 45.0%
TCCATCAAATTGGCACTGCA+AGG + chr8_1:37469981-37470000 Msa1192150:intron 45.0%
TCCTTGCAGTGCCAATTTGA+TGG - chr8_1:37469985-37470004 None:intergenic 45.0%
CCAATACTCAAGTGGTACAG+TGG - chr8_1:37470397-37470416 None:intergenic 45.0%
CCACTGTACCACTTGAGTAT+TGG + chr8_1:37470394-37470413 Msa1192150:intron 45.0%
GCCTTATGCCAATACTCAAG+TGG - chr8_1:37470405-37470424 None:intergenic 45.0%
GATGAATGCAGAAAGCCAAG+AGG + chr8_1:37470510-37470529 Msa1192150:intron 45.0%
TCTTGCTGAAACTGTCCTCT+TGG - chr8_1:37470528-37470547 None:intergenic 45.0%
!!! TGGCCATGCTCCTTTTTTCA+CGG - chr8_1:37470598-37470617 None:intergenic 45.0%
ACTTCCACTTCAATCAGGCA+TGG + chr8_1:37470794-37470813 Msa1192150:intron 45.0%
TCAACCATGCCTGATTGAAG+TGG - chr8_1:37470801-37470820 None:intergenic 45.0%
TGTCAAAACTGTGGACGTGA+AGG + chr8_1:37470875-37470894 Msa1192150:CDS 45.0%
ACACTACTGTCCAGAACTGA+AGG + chr8_1:37470907-37470926 Msa1192150:CDS 45.0%
TACTGTCCAGAACTGAAGGA+TGG + chr8_1:37470911-37470930 Msa1192150:CDS 45.0%
GACAATATGGCCATAACCGA+AGG + chr8_1:37471062-37471081 Msa1192150:CDS 45.0%
! TAACTTGAGGGCATGTCCTT+CGG - chr8_1:37471081-37471100 None:intergenic 45.0%
! CCCTTGAGTTTCTGGAAAGT+AGG - chr8_1:37471233-37471252 None:intergenic 45.0%
CACAAAACAGACAGGGGAAG+GGG - chr8_1:37466004-37466023 None:intergenic 50.0%
GTCACAAAACAGACAGGGGA+AGG - chr8_1:37466006-37466025 None:intergenic 50.0%
CGTGTGGTCACAAAACAGAC+AGG - chr8_1:37466012-37466031 None:intergenic 50.0%
AGGCTTGAGGGTTAAACGTG+TGG - chr8_1:37466028-37466047 None:intergenic 50.0%
!! ATGGGTGCTTTGAGGCTTGA+GGG - chr8_1:37466040-37466059 None:intergenic 50.0%
TCTAGCCCAAACAGATCCTC+CGG - chr8_1:37466435-37466454 None:intergenic 50.0%
TATTGTAACCGCACCAGTGG+CGG + chr8_1:37466624-37466643 Msa1192150:intron 50.0%
TTAGTCCGCCAAAAACAGGG+TGG + chr8_1:37466776-37466795 Msa1192150:intron 50.0%
TAGTCCGCCAAAAACAGGGT+GGG + chr8_1:37466777-37466796 Msa1192150:intron 50.0%
!! CCCGTTTAACCCGCCATTTT+AGG - chr8_1:37466911-37466930 None:intergenic 50.0%
!! AAATGGCGGGTTAAACGGGT+CGG + chr8_1:37466912-37466931 Msa1192150:intron 50.0%
AAACCAAGGGGTGGCAAAAC+GGG - chr8_1:37466939-37466958 None:intergenic 50.0%
!! ACAATGGCGGTTCTAAGGCT+CGG - chr8_1:37467099-37467118 None:intergenic 50.0%
AAGCGACAATGGCGGTTCTA+AGG - chr8_1:37467104-37467123 None:intergenic 50.0%
! TTGGTGGTAAGCGACAATGG+CGG - chr8_1:37467112-37467131 None:intergenic 50.0%
! CCATTGTCGCTTACCACCAA+CGG + chr8_1:37467112-37467131 Msa1192150:intron 50.0%
AAATGGGGATGTGGCTCAGA+TGG + chr8_1:37467233-37467252 Msa1192150:intron 50.0%
TAACCTCTTCCTCGGCAACT+TGG - chr8_1:37467953-37467972 None:intergenic 50.0%
TGGTGACTGGTAAACACGCT+TGG - chr8_1:37469229-37469248 None:intergenic 50.0%
CAACTTCAGGAGATGGTGAC+TGG - chr8_1:37469242-37469261 None:intergenic 50.0%
CAGTCACCATCTCCTGAAGT+TGG + chr8_1:37469240-37469259 Msa1192150:CDS 50.0%
ACAGCGAGTGGCTGCTATTA+AGG + chr8_1:37469569-37469588 Msa1192150:CDS 50.0%
! AAAAGGAGCATGGCCATGCA+AGG + chr8_1:37470602-37470621 Msa1192150:CDS 50.0%
TACCACTGACCGGATTCTCA+TGG - chr8_1:37470697-37470716 None:intergenic 50.0%
TCCGGTCAGTGGTAAGAGTT+CGG + chr8_1:37470703-37470722 Msa1192150:intron 50.0%
! GGCCTTGTAACCTCAAGTGA+CGG + chr8_1:37470724-37470743 Msa1192150:intron 50.0%
GCCTTGTAACCTCAAGTGAC+GGG + chr8_1:37470725-37470744 Msa1192150:intron 50.0%
CCTTGTAACCTCAAGTGACG+GGG + chr8_1:37470726-37470745 Msa1192150:intron 50.0%
GATTTGAACCCCGTCACTTG+AGG - chr8_1:37470737-37470756 None:intergenic 50.0%
ACTGTGGACGTGAAGGACAT+AGG + chr8_1:37470882-37470901 Msa1192150:CDS 50.0%
GGTAGGAGGAGTCATTCATC+TGG + chr8_1:37471421-37471440 Msa1192150:three_prime_UTR 50.0%
ACAGGGGAAGGGGATAACGA+TGG - chr8_1:37465994-37466013 None:intergenic 55.0%
!! CATGGGTGCTTTGAGGCTTG+AGG - chr8_1:37466041-37466060 None:intergenic 55.0%
GTTTAGGTACAGTCCTCCGG+AGG + chr8_1:37466416-37466435 Msa1192150:intron 55.0%
AGTCCTCCGGAGGATCTGTT+TGG + chr8_1:37466426-37466445 Msa1192150:CDS 55.0%
GTCCTCCGGAGGATCTGTTT+GGG + chr8_1:37466427-37466446 Msa1192150:CDS 55.0%
! GGAGGATCTGTTTGGGCTAG+AGG + chr8_1:37466434-37466453 Msa1192150:CDS 55.0%
! GGATCTGTTTGGGCTAGAGG+TGG + chr8_1:37466437-37466456 Msa1192150:CDS 55.0%
AGTCCGCCAAAAACAGGGTG+GGG + chr8_1:37466778-37466797 Msa1192150:intron 55.0%
!! AGCGGACTGGACTAGAGAGA+TGG + chr8_1:37466864-37466883 Msa1192150:intron 55.0%
TCACTCCAGCCCGCCTAAAA+TGG + chr8_1:37466895-37466914 Msa1192150:intron 55.0%
!! AATGGCGGGTTAAACGGGTC+GGG + chr8_1:37466913-37466932 Msa1192150:intron 55.0%
!! CCGTTGGTGGTAAGCGACAA+TGG - chr8_1:37467115-37467134 None:intergenic 55.0%
CGCTTAGCATGCGAGAGGTA+CGG + chr8_1:37467265-37467284 Msa1192150:intron 55.0%
! GCTTAGCATGCGAGAGGTAC+GGG + chr8_1:37467266-37467285 Msa1192150:intron 55.0%
! CTTAGCATGCGAGAGGTACG+GGG + chr8_1:37467267-37467286 Msa1192150:intron 55.0%
CTACCTTGTCCAAGTTGCCG+AGG + chr8_1:37467941-37467960 Msa1192150:CDS 55.0%
CTTCCTCGGCAACTTGGACA+AGG - chr8_1:37467947-37467966 None:intergenic 55.0%
TGTCCAAGTTGCCGAGGAAG+AGG + chr8_1:37467947-37467966 Msa1192150:CDS 55.0%
!! CACAATCTCCAGAGCACTGG+TGG - chr8_1:37468685-37468704 None:intergenic 55.0%
GTCCATGAGAATCCGGTCAG+TGG + chr8_1:37470692-37470711 Msa1192150:intron 55.0%
GCCGAACTCTTACCACTGAC+CGG - chr8_1:37470707-37470726 None:intergenic 55.0%
CCCCGTCACTTGAGGTTACA+AGG - chr8_1:37470729-37470748 None:intergenic 55.0%
TGACGGGGTTCAAATCCTCC+TGG + chr8_1:37470741-37470760 Msa1192150:intron 55.0%
! GAGGGCATGTCCTTCGGTTA+TGG - chr8_1:37471075-37471094 None:intergenic 55.0%
AGCCCAAACAGATCCTCCGG+AGG - chr8_1:37466432-37466451 None:intergenic 60.0%
AAGAATCCTGGCTCCGCCAC+TGG - chr8_1:37466640-37466659 None:intergenic 60.0%
! TGAGGAAAAGTGGCGGAGCC+AGG + chr8_1:37466671-37466690 Msa1192150:intron 60.0%
!!! TCGCCCCACCCTGTTTTTGG+CGG - chr8_1:37466784-37466803 None:intergenic 60.0%
AAAAACAGGGTGGGGCGAGG+CGG + chr8_1:37466786-37466805 Msa1192150:intron 60.0%
TTGAGCCCACCCCCTCAAGT+TGG - chr8_1:37466813-37466832 None:intergenic 60.0%
TCCGCTAGTCCGCCTTTAGG+CGG - chr8_1:37466850-37466869 None:intergenic 60.0%
CAGTCCGCTAGTCCGCCTTT+AGG - chr8_1:37466853-37466872 None:intergenic 60.0%
!! CTAAAGGCGGACTAGCGGAC+TGG + chr8_1:37466851-37466870 Msa1192150:intron 60.0%
CTCCAGCCCGCCTAAAATGG+CGG + chr8_1:37466898-37466917 Msa1192150:intron 60.0%
TCCAGCCCGCCTAAAATGGC+GGG + chr8_1:37466899-37466918 Msa1192150:intron 60.0%
CTGACATGCCACCAGTGCTC+TGG + chr8_1:37468674-37468693 Msa1192150:CDS 60.0%
ACTCGCTGTGCCTGAAGCGT+GGG - chr8_1:37469558-37469577 None:intergenic 60.0%
GCCAAAAACAGGGTGGGGCG+AGG + chr8_1:37466783-37466802 Msa1192150:intron 65.0%
! GCCTCGCCCCACCCTGTTTT+TGG - chr8_1:37466787-37466806 None:intergenic 65.0%
AAAACAGGGTGGGGCGAGGC+GGG + chr8_1:37466787-37466806 Msa1192150:intron 65.0%
TAACACCCCGCCCCGCCTAA+AGG + chr8_1:37466835-37466854 Msa1192150:intron 65.0%
TAGTCCGCCTTTAGGCGGGG+CGG - chr8_1:37466845-37466864 None:intergenic 65.0%
CGCTAGTCCGCCTTTAGGCG+GGG - chr8_1:37466848-37466867 None:intergenic 65.0%
CCGCTAGTCCGCCTTTAGGC+GGG - chr8_1:37466849-37466868 None:intergenic 65.0%
!! CCCGCCTAAAGGCGGACTAG+CGG + chr8_1:37466846-37466865 Msa1192150:intron 65.0%
!! ACCCGCCATTTTAGGCGGGC+TGG - chr8_1:37466903-37466922 None:intergenic 65.0%
CCGAGCACTCGCCCTAACTC+CGG - chr8_1:37467071-37467090 None:intergenic 65.0%
CCGGAGTTAGGGCGAGTGCT+CGG + chr8_1:37467068-37467087 Msa1192150:intron 65.0%
CGGAGTTAGGGCGAGTGCTC+GGG + chr8_1:37467069-37467088 Msa1192150:intron 65.0%
GCGCTCGCTTAGCATGCGAG+AGG + chr8_1:37467260-37467279 Msa1192150:intron 65.0%
CCTGAAGCGTGGGATCCTGG+TGG - chr8_1:37469548-37469567 None:intergenic 65.0%
CCACCAGGATCCCACGCTTC+AGG + chr8_1:37469545-37469564 Msa1192150:CDS 65.0%
GTGCCTGAAGCGTGGGATCC+TGG - chr8_1:37469551-37469570 None:intergenic 65.0%
CACTCGCTGTGCCTGAAGCG+TGG - chr8_1:37469559-37469578 None:intergenic 65.0%
CACGCTTCAGGCACAGCGAG+TGG + chr8_1:37469557-37469576 Msa1192150:CDS 65.0%
TCCTGGCTCCGCCACTGGTG+CGG - chr8_1:37466635-37466654 None:intergenic 70.0%
GGCGAGGCGGGCCAACTTGA+GGG + chr8_1:37466799-37466818 Msa1192150:intron 70.0%
GCGAGGCGGGCCAACTTGAG+GGG + chr8_1:37466800-37466819 Msa1192150:intron 70.0%
CGAGGCGGGCCAACTTGAGG+GGG + chr8_1:37466801-37466820 Msa1192150:intron 70.0%
GCGGGCCAACTTGAGGGGGT+GGG + chr8_1:37466805-37466824 Msa1192150:intron 70.0%
AGTCCGCCTTTAGGCGGGGC+GGG - chr8_1:37466844-37466863 None:intergenic 70.0%
! GGGCCCGTTTTGCCACCCCT+TGG + chr8_1:37466933-37466952 Msa1192150:intron 70.0%
! ACCGCACCAGTGGCGGAGCC+AGG + chr8_1:37466631-37466650 Msa1192150:intron 75.0%
GGGCGAGGCGGGCCAACTTG+AGG + chr8_1:37466798-37466817 Msa1192150:intron 75.0%
GGCGGGCCAACTTGAGGGGG+TGG + chr8_1:37466804-37466823 Msa1192150:intron 75.0%
CACCCCGCCCCGCCTAAAGG+CGG + chr8_1:37466838-37466857 Msa1192150:intron 75.0%
GTCCGCCTTTAGGCGGGGCG+GGG - chr8_1:37466843-37466862 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 37465957 37471487 37465957 ID=Msa1192150;Name=Msa1192150
chr8_1 mRNA 37465957 37471487 37465957 ID=Msa1192150-mRNA-1;Parent=Msa1192150;Name=Msa1192150-mRNA-1;_AED=0.08;_eAED=0.08;_QI=202|1|1|1|1|1|8|262|388
chr8_1 exon 37465957 37466323 37465957 ID=Msa1192150-mRNA-1:exon:12311;Parent=Msa1192150-mRNA-1
chr8_1 exon 37466417 37466472 37466417 ID=Msa1192150-mRNA-1:exon:12312;Parent=Msa1192150-mRNA-1
chr8_1 exon 37467874 37468036 37467874 ID=Msa1192150-mRNA-1:exon:12313;Parent=Msa1192150-mRNA-1
chr8_1 exon 37468668 37468756 37468668 ID=Msa1192150-mRNA-1:exon:12314;Parent=Msa1192150-mRNA-1
chr8_1 exon 37469155 37469287 37469155 ID=Msa1192150-mRNA-1:exon:12315;Parent=Msa1192150-mRNA-1
chr8_1 exon 37469498 37469590 37469498 ID=Msa1192150-mRNA-1:exon:12316;Parent=Msa1192150-mRNA-1
chr8_1 exon 37470521 37470623 37470521 ID=Msa1192150-mRNA-1:exon:12317;Parent=Msa1192150-mRNA-1
chr8_1 exon 37470861 37471487 37470861 ID=Msa1192150-mRNA-1:exon:12318;Parent=Msa1192150-mRNA-1
chr8_1 five_prime_UTR 37465957 37466158 37465957 ID=Msa1192150-mRNA-1:five_prime_utr;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37466159 37466323 37466159 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37466417 37466472 37466417 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37467874 37468036 37467874 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37468668 37468756 37468668 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37469155 37469287 37469155 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37469498 37469590 37469498 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37470521 37470623 37470521 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 CDS 37470861 37471225 37470861 ID=Msa1192150-mRNA-1:cds;Parent=Msa1192150-mRNA-1
chr8_1 three_prime_UTR 37471226 37471487 37471226 ID=Msa1192150-mRNA-1:three_prime_utr;Parent=Msa1192150-mRNA-1
Gene Sequence

>Msa1192150

ATGAATTCTTGCCAACTAGTGATTCACACTCCATTTCGTTCTCTCACATTTCCATGCACAAAAACACCTCACCTCAACATTCATCTCTTCCTTTCCCTTCCTGCATCAAACATCCTTTGCTCTTCACTCAATGATGATTCCTTTTCCATCCCAAAATCATCCCAGTTTAGGTACAGTCCTCCGGAGGATCTGTTTGGGCTAGAGGTGGAATTCAAGCCAAGGAAAGCTAACTCTCATACAAGAGAACCAAGGTCTTGGTTTGGTCCAAATGGACAATATATCAGAGAGCTACCTTGTCCAAGTTGCCGAGGAAGAGGTTATACTCCTTGTACAGAATGTGGAATAGAACGATCTAGGTCAGACTGTCCAAAATGTAATGGAAAGGGTTTGCTGACATGCCACCAGTGCTCTGGAGATTGTGTTATATGGGAAGAGTCGATTGATGAACGACCATGGGAGAGAGCTCAATCAATATCTCCACTCAAAGTGAAGGATGACGATGAAGTTGACAAATTGGACATAAAGCTAGATGCGAAGAAAAAATCCAAGCGTGTTTACCAGTCACCATCTCCTGAAGTTGGATTGAAGATTAGTCGTTCATTAAAAAGTCTCAATGCCAAAACTGGTCTATTTAGCAAACGAATGAAGATCATCCACCAGGATCCCACGCTTCAGGCACAGCGAGTGGCTGCTATTAAGAAAGCCAAGAGGACAGTTTCAGCAAGAAATCATGCTTCCAAAACTATGAAAGATTTCTTTAGTGATCCAATAAACCGTGAAAAAAGGAGCATGGCCATGCAAGGTGTGAAATTCTATTGTCAAAACTGTGGACGTGAAGGACATAGGAGACACTACTGTCCAGAACTGAAGGATGGTTTGATTGATCGGCGATTCACATGTAGGCTATGTGGCGAAAAAGGCCACAACAGAAGAACATGCAGTAAGTTAAGGATAAGCCATAGTGATGGGAGAGTTATAAAACATCATCGATGTAAAATATGTCGACAATATGGCCATAACCGAAGGACATGCCCTCAAGTTATTTCAAATAAAAGAATGGAAATGACATCTCAGAGAGTATACAAATGTCGATTGTGTCAGAAAGAGGGACACAATAGTAGGACATGTCCTAGTAGAATAGTTGGCACTGAACATTCTCTAGAATAA

Protein sequence

>Msa1192150

MNSCQLVIHTPFRSLTFPCTKTPHLNIHLFLSLPASNILCSSLNDDSFSIPKSSQFRYSPPEDLFGLEVEFKPRKANSHTREPRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRSDCPKCNGKGLLTCHQCSGDCVIWEESIDERPWERAQSISPLKVKDDDEVDKLDIKLDAKKKSKRVYQSPSPEVGLKISRSLKSLNAKTGLFSKRMKIIHQDPTLQAQRVAAIKKAKRTVSARNHASKTMKDFFSDPINREKRSMAMQGVKFYCQNCGREGHRRHYCPELKDGLIDRRFTCRLCGEKGHNRRTCSKLRISHSDGRVIKHHRCKICRQYGHNRRTCPQVISNKRMEMTSQRVYKCRLCQKEGHNSRTCPSRIVGTEHSLE*