Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa0799200 | 0.814265 | 1.682195e-51 | -8.615850e-47 |
| Msa0011720 | Msa0799200 | 0.817904 | 2.588965e-52 | -8.615850e-47 |
| Msa0017120 | Msa0799200 | 0.816144 | 6.434073e-52 | -8.615850e-47 |
| Msa0021300 | Msa0799200 | 0.809081 | 2.256344e-50 | -8.615850e-47 |
| Msa0030000 | Msa0799200 | 0.815830 | 7.560680e-52 | -8.615850e-47 |
| Msa0047470 | Msa0799200 | 0.809311 | 2.014374e-50 | -8.615850e-47 |
| Msa0060350 | Msa0799200 | 0.839578 | 1.457077e-57 | -8.615850e-47 |
| Msa0060600 | Msa0799200 | 0.813531 | 2.441264e-51 | -8.615850e-47 |
| Msa0065390 | Msa0799200 | 0.804669 | 1.933167e-49 | -8.615850e-47 |
| Msa0068410 | Msa0799200 | 0.801311 | 9.560450e-49 | -8.615850e-47 |
| Msa0079250 | Msa0799200 | 0.816063 | 6.706851e-52 | -8.615850e-47 |
| Msa0091480 | Msa0799200 | 0.851881 | 6.646786e-61 | -8.615850e-47 |
| Msa0094100 | Msa0799200 | 0.828275 | 9.842301e-55 | -8.615850e-47 |
| Msa0105340 | Msa0799200 | 0.826057 | 3.342874e-54 | -8.615850e-47 |
| Msa0110710 | Msa0799200 | 0.801209 | 1.003157e-48 | -8.615850e-47 |
| Msa0605230 | Msa0799200 | 0.827859 | 1.239288e-54 | -8.615850e-47 |
| Msa0605620 | Msa0799200 | 0.805947 | 1.043529e-49 | -8.615850e-47 |
| Msa0606060 | Msa0799200 | 0.803329 | 3.672145e-49 | -8.615850e-47 |
| Msa0607280 | Msa0799200 | 0.808260 | 3.380033e-50 | -8.615850e-47 |
| Msa0617370 | Msa0799200 | 0.804120 | 2.515403e-49 | -8.615850e-47 |
| Msa0619330 | Msa0799200 | 0.819001 | 1.460773e-52 | -8.615850e-47 |
| Msa0620640 | Msa0799200 | 0.803679 | 3.106493e-49 | -8.615850e-47 |
| Msa0624730 | Msa0799200 | 0.825580 | 4.339128e-54 | -8.615850e-47 |
| Msa0628060 | Msa0799200 | 0.815512 | 8.898528e-52 | -8.615850e-47 |
| Msa0646390 | Msa0799200 | 0.809266 | 2.059982e-50 | -8.615850e-47 |
| Msa0647000 | Msa0799200 | 0.813653 | 2.295475e-51 | -8.615850e-47 |
| Msa0659040 | Msa0799200 | 0.843040 | 1.789458e-58 | -8.615850e-47 |
| Msa0667970 | Msa0799200 | 0.802281 | 6.043850e-49 | -8.615850e-47 |
| Msa0674220 | Msa0799200 | 0.833103 | 6.463582e-56 | -8.615850e-47 |
| Msa0674300 | Msa0799200 | 0.824030 | 1.006332e-53 | -8.615850e-47 |
| Msa0681890 | Msa0799200 | 0.820702 | 5.964756e-53 | -8.615850e-47 |
| Msa0686610 | Msa0799200 | 0.803764 | 2.982736e-49 | -8.615850e-47 |
| Msa0688550 | Msa0799200 | 0.847469 | 1.133806e-59 | -8.615850e-47 |
| Msa0690720 | Msa0799200 | 0.818859 | 1.573318e-52 | -8.615850e-47 |
| Msa0704990 | Msa0799200 | 0.847029 | 1.497415e-59 | -8.615850e-47 |
| Msa0705030 | Msa0799200 | 0.831733 | 1.411867e-55 | -8.615850e-47 |
| Msa0707780 | Msa0799200 | 0.809061 | 2.278764e-50 | -8.615850e-47 |
| Msa0709480 | Msa0799200 | 0.807168 | 5.767722e-50 | -8.615850e-47 |
| Msa0716780 | Msa0799200 | 0.820645 | 6.149108e-53 | -8.615850e-47 |
| Msa0717510 | Msa0799200 | 0.804460 | 2.137432e-49 | -8.615850e-47 |
| Msa0726610 | Msa0799200 | 0.853909 | 1.749332e-61 | -8.615850e-47 |
| Msa0730180 | Msa0799200 | 0.820832 | 5.568161e-53 | -8.615850e-47 |
| Msa0733000 | Msa0799200 | 0.804874 | 1.751445e-49 | -8.615850e-47 |
| Msa0743640 | Msa0799200 | 0.805693 | 1.180445e-49 | -8.615850e-47 |
| Msa0748930 | Msa0799200 | 0.805443 | 1.331502e-49 | -8.615850e-47 |
| Msa0750380 | Msa0799200 | 0.840553 | 8.113004e-58 | -8.615850e-47 |
| Msa0756480 | Msa0799200 | 0.803344 | 3.645099e-49 | -8.615850e-47 |
| Msa0763880 | Msa0799200 | 0.807141 | 5.842591e-50 | -8.615850e-47 |
| Msa0763910 | Msa0799200 | 0.823411 | 1.405642e-53 | -8.615850e-47 |
| Msa0770430 | Msa0799200 | 0.829812 | 4.173869e-55 | -8.615850e-47 |
| Msa0772150 | Msa0799200 | 0.818836 | 1.592167e-52 | -8.615850e-47 |
| Msa0775260 | Msa0799200 | 0.816696 | 4.840873e-52 | -8.615850e-47 |
| Msa0780140 | Msa0799200 | 0.810834 | 9.463557e-51 | -8.615850e-47 |
| Msa0787720 | Msa0799200 | 0.809276 | 2.049396e-50 | -8.615850e-47 |
| Msa0792170 | Msa0799200 | 0.806809 | 6.866876e-50 | -8.615850e-47 |
| Msa0794460 | Msa0799200 | 0.821204 | 4.572118e-53 | -8.615850e-47 |
| Msa0797220 | Msa0799200 | 0.832962 | 7.007515e-56 | -8.615850e-47 |
| Msa0798950 | Msa0799200 | 0.813037 | 3.134565e-51 | -8.615850e-47 |
| Msa0799200 | Msa0800130 | 0.834631 | 2.680445e-56 | -8.615850e-47 |
| Msa0799200 | Msa0811510 | 0.826747 | 2.289396e-54 | -8.615850e-47 |
| Msa0799200 | Msa0830720 | 0.845472 | 3.976350e-59 | -8.615850e-47 |
| Msa0799200 | Msa0835510 | 0.811399 | 7.138377e-51 | -8.615850e-47 |
| Msa0799200 | Msa0837590 | 0.803796 | 2.938008e-49 | -8.615850e-47 |
| Msa0799200 | Msa0837990 | 0.820348 | 7.194090e-53 | -8.615850e-47 |
| Msa0799200 | Msa0841980 | 0.806217 | 9.158740e-50 | -8.615850e-47 |
| Msa0799200 | Msa0844100 | 0.817372 | 3.411688e-52 | -8.615850e-47 |
| Msa0799200 | Msa0847200 | 0.846207 | 2.510873e-59 | -8.615850e-47 |
| Msa0799200 | Msa0848380 | 0.821667 | 3.574733e-53 | -8.615850e-47 |
| Msa0799200 | Msa0851740 | 0.834580 | 2.760969e-56 | -8.615850e-47 |
| Msa0799200 | Msa0853170 | 0.819543 | 1.099325e-52 | -8.615850e-47 |
| Msa0799200 | Msa0872660 | 0.801469 | 8.872323e-49 | -8.615850e-47 |
| Msa0799200 | Msa0890250 | 0.814929 | 1.199335e-51 | -8.615850e-47 |
| Msa0799200 | Msa0901100 | 0.807887 | 4.058573e-50 | -8.615850e-47 |
| Msa0799200 | Msa0925160 | 0.824891 | 6.313926e-54 | -8.615850e-47 |
| Msa0799200 | Msa0925730 | 0.800837 | 1.194821e-48 | -8.615850e-47 |
| Msa0799200 | Msa0930330 | 0.803460 | 3.450130e-49 | -8.615850e-47 |
| Msa0799200 | Msa0934830 | 0.807592 | 4.688139e-50 | -8.615850e-47 |
| Msa0799200 | Msa0936430 | 0.832024 | 1.196980e-55 | -8.615850e-47 |
| Msa0799200 | Msa0950620 | 0.820644 | 6.150985e-53 | -8.615850e-47 |
| Msa0799200 | Msa0955260 | 0.816154 | 6.400002e-52 | -8.615850e-47 |
| Msa0799200 | Msa0971860 | 0.830701 | 2.532334e-55 | -8.615850e-47 |
| Msa0799200 | Msa0988500 | 0.818251 | 2.160585e-52 | -8.615850e-47 |
| Msa0799200 | Msa1010140 | 0.831166 | 1.947536e-55 | -8.615850e-47 |
| Msa0799200 | Msa1015060 | 0.819692 | 1.016045e-52 | -8.615850e-47 |
| Msa0799200 | Msa1021770 | 0.805978 | 1.027950e-49 | -8.615850e-47 |
| Msa0799200 | Msa1029320 | 0.817250 | 3.635987e-52 | -8.615850e-47 |
| Msa0799200 | Msa1044040 | 0.814919 | 1.205528e-51 | -8.615850e-47 |
| Msa0799200 | Msa1044340 | 0.801557 | 8.514073e-49 | -8.615850e-47 |
| Msa0799200 | Msa1067910 | 0.812057 | 5.133827e-51 | -8.615850e-47 |
| Msa0799200 | Msa1067920 | 0.806759 | 7.038522e-50 | -8.615850e-47 |
| Msa0799200 | Msa1073840 | 0.803818 | 2.907513e-49 | -8.615850e-47 |
| Msa0799200 | Msa1081700 | 0.808846 | 2.533562e-50 | -8.615850e-47 |
| Msa0799200 | Msa1084490 | 0.802330 | 5.905922e-49 | -8.615850e-47 |
| Msa0799200 | Msa1089530 | 0.816557 | 5.199941e-52 | -8.615850e-47 |
| Msa0799200 | Msa1113200 | 0.820454 | 6.800240e-53 | -8.615850e-47 |
| Msa0799200 | Msa1113210 | 0.805730 | 1.158998e-49 | -8.615850e-47 |
| Msa0799200 | Msa1118140 | 0.806758 | 7.040639e-50 | -8.615850e-47 |
| Msa0799200 | Msa1125780 | 0.807377 | 5.208325e-50 | -8.615850e-47 |
| Msa0799200 | Msa1125950 | 0.811596 | 6.468394e-51 | -8.615850e-47 |
| Msa0799200 | Msa1149760 | 0.821112 | 4.801198e-53 | -8.615850e-47 |
| Msa0799200 | Msa1166180 | 0.826656 | 2.406097e-54 | -8.615850e-47 |
| Msa0799200 | Msa1166280 | 0.822311 | 2.535164e-53 | -8.615850e-47 |
| Msa0799200 | Msa1171340 | 0.809371 | 1.956329e-50 | -8.615850e-47 |
| Msa0799200 | Msa1184580 | 0.823143 | 1.623296e-53 | -8.615850e-47 |
| Msa0799200 | Msa1200920 | 0.818073 | 2.370564e-52 | -8.615850e-47 |
| Msa0799200 | Msa1214900 | 0.830266 | 3.236000e-55 | -8.615850e-47 |
| Msa0799200 | Msa1222580 | 0.823801 | 1.138925e-53 | -8.615850e-47 |
| Msa0799200 | Msa1226600 | 0.828658 | 7.955273e-55 | -8.615850e-47 |
| Msa0799200 | Msa1229660 | 0.804928 | 1.707016e-49 | -8.615850e-47 |
| Msa0799200 | Msa1242330 | 0.820059 | 8.378156e-53 | -8.615850e-47 |
| Msa0799200 | Msa1268370 | 0.829020 | 6.502609e-55 | -8.615850e-47 |
| Msa0799200 | Msa1280120 | 0.836200 | 1.075502e-56 | -8.615850e-47 |
| Msa0799200 | Msa1280130 | 0.820143 | 8.014549e-53 | -8.615850e-47 |
| Msa0799200 | Msa1283770 | 0.816131 | 6.477957e-52 | -8.615850e-47 |
| Msa0799200 | Msa1309100 | 0.813864 | 2.062229e-51 | -8.615850e-47 |
| Msa0799200 | Msa1325980 | 0.808187 | 3.503243e-50 | -8.615850e-47 |
| Msa0799200 | Msa1349360 | 0.815872 | 7.400834e-52 | -8.615850e-47 |
| Msa0799200 | Msa1354040 | 0.803453 | 3.461628e-49 | -8.615850e-47 |
| Msa0799200 | Msa1376640 | 0.804895 | 1.733928e-49 | -8.615850e-47 |
| Msa0799200 | Msa1379980 | 0.801705 | 7.936710e-49 | -8.615850e-47 |
| Msa0799200 | Msa1381130 | 0.803732 | 3.029749e-49 | -8.615850e-47 |
| Msa0799200 | Msa1395570 | 0.821492 | 3.922530e-53 | -8.615850e-47 |
| Msa0799200 | Msa1395580 | 0.814057 | 1.869788e-51 | -8.615850e-47 |
| Msa0799200 | Msa1397540 | 0.828817 | 7.282649e-55 | -8.615850e-47 |
| Msa0799200 | Msa1405770 | 0.806355 | 8.562549e-50 | -8.615850e-47 |
| Msa0799200 | Msa1410170 | 0.806548 | 7.798369e-50 | -8.615850e-47 |
| Msa0799200 | Msa1412080 | 0.818906 | 1.534979e-52 | -8.615850e-47 |
| Msa0799200 | Msa1412520 | 0.814026 | 1.899850e-51 | -8.615850e-47 |
| Msa0799200 | Msa1418200 | 0.818954 | 1.496532e-52 | -8.615850e-47 |
| Msa0799200 | Msa1428420 | 0.822626 | 2.141811e-53 | -8.615850e-47 |
| Msa0799200 | Msa1430760 | 0.822917 | 1.832752e-53 | -8.615850e-47 |
| Msa0799200 | Msa1431730 | 0.812937 | 3.297441e-51 | -8.615850e-47 |
| Msa0799200 | Msa1440180 | 0.808344 | 3.243442e-50 | -8.615850e-47 |
| Msa0799200 | Msa1449740 | 0.809161 | 2.169057e-50 | -8.615850e-47 |
| Msa0799200 | Msa1456650 | 0.806171 | 9.362330e-50 | -8.615850e-47 |
| Msa0799200 | Msa1456810 | 0.841017 | 6.132999e-58 | -8.615850e-47 |
| Msa0799200 | Msa1464560 | 0.806163 | 9.398285e-50 | -8.615850e-47 |
| Msa0126900 | Msa0799200 | 0.807522 | 4.852371e-50 | -8.615850e-47 |
| Msa0135980 | Msa0799200 | 0.813771 | 2.161798e-51 | -8.615850e-47 |
| Msa0141550 | Msa0799200 | 0.803741 | 3.015719e-49 | -8.615850e-47 |
| Msa0141670 | Msa0799200 | 0.808108 | 3.642044e-50 | -8.615850e-47 |
| Msa0143970 | Msa0799200 | 0.840854 | 6.765679e-58 | -8.615850e-47 |
| Msa0143980 | Msa0799200 | 0.805058 | 1.603459e-49 | -8.615850e-47 |
| Msa0146600 | Msa0799200 | 0.803559 | 3.290383e-49 | -8.615850e-47 |
| Msa0151690 | Msa0799200 | 0.811075 | 8.393685e-51 | -8.615850e-47 |
| Msa0157020 | Msa0799200 | 0.805819 | 1.110313e-49 | -8.615850e-47 |
| Msa0162030 | Msa0799200 | 0.818763 | 1.653784e-52 | -8.615850e-47 |
| Msa0162050 | Msa0799200 | 0.813154 | 2.954234e-51 | -8.615850e-47 |
| Msa0162070 | Msa0799200 | 0.814202 | 1.737001e-51 | -8.615850e-47 |
| Msa0165470 | Msa0799200 | 0.814836 | 1.257875e-51 | -8.615850e-47 |
| Msa0168100 | Msa0799200 | 0.803243 | 3.826048e-49 | -8.615850e-47 |
| Msa0170580 | Msa0799200 | 0.864328 | 1.316233e-64 | -8.615850e-47 |
| Msa0183610 | Msa0799200 | 0.824850 | 6.453974e-54 | -8.615850e-47 |
| Msa0183620 | Msa0799200 | 0.853400 | 2.449714e-61 | -8.615850e-47 |
| Msa0207000 | Msa0799200 | 0.825394 | 4.800148e-54 | -8.615850e-47 |
| Msa0208630 | Msa0799200 | 0.842756 | 2.128471e-58 | -8.615850e-47 |
| Msa0208930 | Msa0799200 | 0.852666 | 3.974482e-61 | -8.615850e-47 |
| Msa0213080 | Msa0799200 | 0.803736 | 3.024082e-49 | -8.615850e-47 |
| Msa0217470 | Msa0799200 | 0.806662 | 7.377933e-50 | -8.615850e-47 |
| Msa0223390 | Msa0799200 | 0.801718 | 7.890633e-49 | -8.615850e-47 |
| Msa0236330 | Msa0799200 | 0.808897 | 2.470852e-50 | -8.615850e-47 |
| Msa0371610 | Msa0799200 | 0.830438 | 2.936778e-55 | -8.615850e-47 |
| Msa0387790 | Msa0799200 | 0.823910 | 1.074161e-53 | -8.615850e-47 |
| Msa0413740 | Msa0799200 | 0.812776 | 3.575466e-51 | -8.615850e-47 |
| Msa0420070 | Msa0799200 | 0.800822 | 1.203275e-48 | -8.615850e-47 |
| Msa0423110 | Msa0799200 | 0.814314 | 1.640809e-51 | -8.615850e-47 |
| Msa0427050 | Msa0799200 | 0.815211 | 1.038369e-51 | -8.615850e-47 |
| Msa0431520 | Msa0799200 | 0.805291 | 1.432941e-49 | -8.615850e-47 |
| Msa0431830 | Msa0799200 | 0.802764 | 4.805622e-49 | -8.615850e-47 |
| Msa0437710 | Msa0799200 | 0.819504 | 1.121595e-52 | -8.615850e-47 |
| Msa0458790 | Msa0799200 | 0.811533 | 6.675438e-51 | -8.615850e-47 |
| Msa0469970 | Msa0799200 | 0.810367 | 1.194169e-50 | -8.615850e-47 |
| Msa0473450 | Msa0799200 | 0.824926 | 6.194361e-54 | -8.615850e-47 |
| Msa0476180 | Msa0799200 | 0.800597 | 1.337885e-48 | -8.615850e-47 |
| Msa0480320 | Msa0799200 | 0.811061 | 8.452170e-51 | -8.615850e-47 |
| Msa0240780 | Msa0799200 | 0.808233 | 3.425749e-50 | -8.615850e-47 |
| Msa0265820 | Msa0799200 | 0.832614 | 8.550442e-56 | -8.615850e-47 |
| Msa0269360 | Msa0799200 | 0.816330 | 5.845305e-52 | -8.615850e-47 |
| Msa0278620 | Msa0799200 | 0.814108 | 1.822434e-51 | -8.615850e-47 |
| Msa0284780 | Msa0799200 | 0.811221 | 7.801290e-51 | -8.615850e-47 |
| Msa0284870 | Msa0799200 | 0.800084 | 1.701528e-48 | -8.615850e-47 |
| Msa0295240 | Msa0799200 | 0.800674 | 1.289864e-48 | -8.615850e-47 |
| Msa0296610 | Msa0799200 | 0.814662 | 1.374433e-51 | -8.615850e-47 |
| Msa0296760 | Msa0799200 | 0.889856 | 1.664699e-73 | -8.615850e-47 |
| Msa0318000 | Msa0799200 | 0.812064 | 5.115482e-51 | -8.615850e-47 |
| Msa0318310 | Msa0799200 | 0.804269 | 2.342189e-49 | -8.615850e-47 |
| Msa0342200 | Msa0799200 | 0.836637 | 8.326455e-57 | -8.615850e-47 |
| Msa0351220 | Msa0799200 | 0.813731 | 2.206670e-51 | -8.615850e-47 |
| Msa0352510 | Msa0799200 | 0.804340 | 2.264435e-49 | -8.615850e-47 |
| Msa0357380 | Msa0799200 | 0.825382 | 4.831545e-54 | -8.615850e-47 |
| Msa0357390 | Msa0799200 | 0.824096 | 9.713802e-54 | -8.615850e-47 |
| Msa0487910 | Msa0799200 | 0.800054 | 1.725583e-48 | -8.615850e-47 |
| Msa0505390 | Msa0799200 | 0.811744 | 6.007782e-51 | -8.615850e-47 |
| Msa0508200 | Msa0799200 | 0.813052 | 3.110734e-51 | -8.615850e-47 |
| Msa0509970 | Msa0799200 | 0.821850 | 3.242606e-53 | -8.615850e-47 |
| Msa0511890 | Msa0799200 | 0.806681 | 7.311022e-50 | -8.615850e-47 |
| Msa0512310 | Msa0799200 | 0.819099 | 1.387627e-52 | -8.615850e-47 |
| Msa0514990 | Msa0799200 | 0.862894 | 3.668341e-64 | -8.615850e-47 |
| Msa0524050 | Msa0799200 | 0.818855 | 1.576518e-52 | -8.615850e-47 |
| Msa0530930 | Msa0799200 | 0.819051 | 1.422529e-52 | -8.615850e-47 |
| Msa0538240 | Msa0799200 | 0.804745 | 1.863753e-49 | -8.615850e-47 |
| Msa0540320 | Msa0799200 | 0.834239 | 3.362522e-56 | -8.615850e-47 |
| Msa0542040 | Msa0799200 | 0.800136 | 1.660697e-48 | -8.615850e-47 |
| Msa0546380 | Msa0799200 | 0.800472 | 1.418400e-48 | -8.615850e-47 |
| Msa0546740 | Msa0799200 | 0.810879 | 9.256672e-51 | -8.615850e-47 |
| Msa0549740 | Msa0799200 | 0.821684 | 3.542621e-53 | -8.615850e-47 |
| Msa0576420 | Msa0799200 | 0.807082 | 6.013521e-50 | -8.615850e-47 |
| Msa0577230 | Msa0799200 | 0.844673 | 6.535353e-59 | -8.615850e-47 |
| Msa0582110 | Msa0799200 | 0.831239 | 1.868719e-55 | -8.615850e-47 |
| Msa0587900 | Msa0799200 | 0.817467 | 3.249098e-52 | -8.615850e-47 |
| Msa0596100 | Msa0799200 | 0.835800 | 1.359242e-56 | -8.615850e-47 |
| Msa0598250 | Msa0799200 | 0.805105 | 1.567095e-49 | -8.615850e-47 |
| Msa0600390 | Msa0799200 | 0.801131 | 1.040642e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 108 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATGAACTTTATGTATTT+TGG | 0.087585 | 5_3:+12285747 | Msa0799200:three_prime_UTR |
| ACATGAAGATTGAATGAATT+TGG | 0.181587 | 5_3:-12283684 | None:intergenic |
| CAAAATCTTCGTTCCTCTTC+TGG | 0.189240 | 5_3:-12285399 | None:intergenic |
| ATTGCTAGTTAGTTGTAAAA+AGG | 0.242009 | 5_3:-12285475 | None:intergenic |
| TGATCAGTTCACAGAAGTTT+TGG | 0.257845 | 5_3:-12284667 | None:intergenic |
| AGTTGATGTACTGAACATTT+TGG | 0.258107 | 5_3:+12285644 | Msa0799200:three_prime_UTR |
| ATGATTAAGGTTTGTTCGTT+AGG | 0.350942 | 5_3:+12285924 | Msa0799200:three_prime_UTR |
| ACGACTCAAGCAGATGTTTA+GGG | 0.369037 | 5_3:-12283731 | None:intergenic |
| TGTTGGTAGTCTGAACCTTT+TGG | 0.370855 | 5_3:+12285711 | Msa0799200:three_prime_UTR |
| TGCCTCCTCTGTCGAGATCT+TGG | 0.371412 | 5_3:+12283633 | Msa0799200:CDS |
| GACGACTCAAGCAGATGTTT+AGG | 0.386335 | 5_3:-12283732 | None:intergenic |
| ACGAAAGCAGCATATCACTA+TGG | 0.398317 | 5_3:+12284584 | Msa0799200:three_prime_UTR |
| GAGGTTGGAGAGGAGTTAAT+AGG | 0.412700 | 5_3:+12284791 | Msa0799200:three_prime_UTR |
| ATCATCTTCCTCATGGAAAT+CGG | 0.417547 | 5_3:-12283894 | None:intergenic |
| GCATTTGGTTGCAACATACT+TGG | 0.419781 | 5_3:+12285862 | Msa0799200:three_prime_UTR |
| AACTGAACTATGGCAGGATT+CGG | 0.423026 | 5_3:+12285353 | Msa0799200:three_prime_UTR |
| AGTGAACGGACGGTGTTAGA+AGG | 0.426775 | 5_3:-12283773 | None:intergenic |
| TTTGTCAACTATCTCTGAAA+AGG | 0.431947 | 5_3:+12285530 | Msa0799200:three_prime_UTR |
| AGGAAGATGATGAGAGGGGA+GGG | 0.437939 | 5_3:-12283595 | None:intergenic |
| GAGGAGTTAATAGGAGAAGA+AGG | 0.445991 | 5_3:+12284800 | Msa0799200:three_prime_UTR |
| ATGGCAGGATTCGGTGGTTA+CGG | 0.452060 | 5_3:+12285362 | Msa0799200:three_prime_UTR |
| ATAGGAGAAGAAGGTGGCAG+AGG | 0.454543 | 5_3:+12284809 | Msa0799200:three_prime_UTR |
| GCAGTCTTCAACCAGCTTCA+AGG | 0.457614 | 5_3:-12285563 | None:intergenic |
| ATAGTTCAGTTTAAACCTCC+TGG | 0.459928 | 5_3:-12285341 | None:intergenic |
| ATGTTTAGGGTTGAAGTTGT+CGG | 0.460614 | 5_3:-12283718 | None:intergenic |
| TTGAAGACTGCGACAACATA+TGG | 0.463057 | 5_3:+12285575 | Msa0799200:three_prime_UTR |
| GGATTCGGTGGTTACGGAGG+TGG | 0.464516 | 5_3:+12285368 | Msa0799200:three_prime_UTR |
| TTCAACCAGCTTCAAGGATG+TGG | 0.465702 | 5_3:-12285557 | None:intergenic |
| TTTCCATGAGGAAGATGATT+CGG | 0.475294 | 5_3:+12283898 | Msa0799200:three_prime_UTR |
| TTTGTGAGTTCTAAGATAGA+TGG | 0.478243 | 5_3:+12284390 | Msa0799200:three_prime_UTR |
| TGGGAGAGAGCAACGGAGGT+TGG | 0.478823 | 5_3:+12284776 | Msa0799200:three_prime_UTR |
| GAGAAAGGAAGATGATGAGA+GGG | 0.489595 | 5_3:-12283600 | None:intergenic |
| TTATAGTAGATGCTTGATAA+TGG | 0.494407 | 5_3:+12285502 | Msa0799200:three_prime_UTR |
| TAGGAGAAGAAGGTGGCAGA+GGG | 0.494590 | 5_3:+12284810 | Msa0799200:three_prime_UTR |
| CTCCCACCTCACCACTATCA+TGG | 0.495212 | 5_3:-12284759 | None:intergenic |
| GAGAAGAAGGTGGCAGAGGG+AGG | 0.498422 | 5_3:+12284813 | Msa0799200:three_prime_UTR |
| GGTTTAAACTGAACTATGGC+AGG | 0.500639 | 5_3:+12285347 | Msa0799200:three_prime_UTR |
| ATGAGCAAGTGTGCTGCATA+TGG | 0.501067 | 5_3:+12285840 | Msa0799200:three_prime_UTR |
| AGTGTGCTGCATATGGCATT+TGG | 0.502436 | 5_3:+12285847 | Msa0799200:three_prime_UTR |
| ATACCATTCCCTACACCAAA+AGG | 0.504862 | 5_3:-12285726 | None:intergenic |
| AGGAGGTTTAAACTGAACTA+TGG | 0.505792 | 5_3:+12285343 | Msa0799200:three_prime_UTR |
| GAGATGAAAACGATAACAAT+GGG | 0.508666 | 5_3:-12283559 | None:intergenic |
| TCACCGAATCATCTTCCTCA+TGG | 0.508725 | 5_3:-12283901 | None:intergenic |
| CAATGACGGTGTCTGAGGAC+GGG | 0.511301 | 5_3:+12284733 | Msa0799200:three_prime_UTR |
| TCAATTCTTAGCCAATGCCT+TGG | 0.518556 | 5_3:-12283524 | None:intergenic |
| CGAGGTGGTGGTATGATTTG+AGG | 0.518770 | 5_3:+12284701 | Msa0799200:three_prime_UTR |
| TGGAGAGAATAAGAGAAAAG+AGG | 0.522128 | 5_3:-12283664 | None:intergenic |
| TGAACAGCAACATCGATGTC+AGG | 0.525759 | 5_3:-12283818 | None:intergenic |
| AGGCAAGGTAGAGCAGAGAA+AGG | 0.529328 | 5_3:-12283615 | None:intergenic |
| CAACACACCGCTCAATTCCA+AGG | 0.536993 | 5_3:+12283507 | None:intergenic |
| AAGGAAGATGATGAGAGGGG+AGG | 0.544853 | 5_3:-12283596 | None:intergenic |
| GGCTTTGACAAGGTCAGCGG+TGG | 0.545196 | 5_3:+12285428 | Msa0799200:three_prime_UTR |
| GAGAAATAGAAAATGAAAGA+TGG | 0.546411 | 5_3:+12285317 | Msa0799200:three_prime_UTR |
| GCAATGACGGTGTCTGAGGA+CGG | 0.548919 | 5_3:+12284732 | Msa0799200:three_prime_UTR |
| ATGATTTGAGAGCGAGGTGG+TGG | 0.550445 | 5_3:+12284689 | Msa0799200:three_prime_UTR |
| AGGACGGGCAGCCATGATAG+TGG | 0.551298 | 5_3:+12284748 | Msa0799200:three_prime_UTR |
| ACCGCTCAATTCCAAGGCAT+TGG | 0.553570 | 5_3:+12283513 | None:intergenic |
| GAGAACCACATCCTTGAAGC+TGG | 0.555008 | 5_3:+12285552 | Msa0799200:three_prime_UTR |
| AGCATTCTGCAACCTTTCCA+TGG | 0.556494 | 5_3:+12283970 | Msa0799200:three_prime_UTR |
| AGAAAGGAAGATGATGAGAG+GGG | 0.561210 | 5_3:-12283599 | None:intergenic |
| TAGAAAATGAAAGATGGTCC+AGG | 0.561434 | 5_3:+12285323 | Msa0799200:three_prime_UTR |
| GAGAGCAACGGAGGTTGGAG+AGG | 0.562647 | 5_3:+12284781 | Msa0799200:three_prime_UTR |
| TGAGATGAAAACGATAACAA+TGG | 0.565809 | 5_3:-12283560 | None:intergenic |
| AAATTCATTCAATCTTCATG+TGG | 0.566495 | 5_3:+12283686 | Msa0799200:CDS |
| CAGCCATGATAGTGGTGAGG+TGG | 0.566700 | 5_3:+12284756 | Msa0799200:three_prime_UTR |
| CGAAAGCAGCATATCACTAT+GGG | 0.571952 | 5_3:+12284585 | Msa0799200:three_prime_UTR |
| TGAGAGGGGAGGGAGAGCAG+AGG | 0.575764 | 5_3:-12283585 | None:intergenic |
| GGTGGTTACGGAGGTGGTGA+CGG | 0.577502 | 5_3:+12285374 | Msa0799200:three_prime_UTR |
| AGAGAAAGGAAGATGATGAG+AGG | 0.579564 | 5_3:-12283601 | None:intergenic |
| GGTGGTGACGGTGCCAGAAG+AGG | 0.583848 | 5_3:+12285386 | Msa0799200:three_prime_UTR |
| TGCGACTCACTAAGAAAAGG+TGG | 0.584679 | 5_3:+12284622 | Msa0799200:three_prime_UTR |
| AGATCTCGACAGAGGAGGCA+AGG | 0.585218 | 5_3:-12283630 | None:intergenic |
| CGGAGGATGATTTGAGTGAA+CGG | 0.585482 | 5_3:-12283787 | None:intergenic |
| TGACAAGGTCAGCGGTGGAG+TGG | 0.588046 | 5_3:+12285433 | Msa0799200:three_prime_UTR |
| GGTATGATTTGAGGTGAGGA+TGG | 0.589014 | 5_3:+12284710 | Msa0799200:three_prime_UTR |
| AGTTGCGACTCACTAAGAAA+AGG | 0.593642 | 5_3:+12284619 | Msa0799200:three_prime_UTR |
| AGGCGTAATCAGAATCATGT+TGG | 0.594161 | 5_3:+12285694 | Msa0799200:three_prime_UTR |
| CTTAAAGTGAACATACGTGC+TGG | 0.595313 | 5_3:+12284549 | Msa0799200:intron |
| GCCAATGCCTTGGAATTGAG+CGG | 0.598969 | 5_3:-12283514 | None:intergenic |
| GGTGAGGTGGGAGAGAGCAA+CGG | 0.601847 | 5_3:+12284769 | Msa0799200:three_prime_UTR |
| GCAGGATTCGGTGGTTACGG+AGG | 0.603271 | 5_3:+12285365 | Msa0799200:three_prime_UTR |
| AGCCATGATAGTGGTGAGGT+GGG | 0.604715 | 5_3:+12284757 | Msa0799200:three_prime_UTR |
| CTAAAAGATGCTAAGCGTGT+AGG | 0.605875 | 5_3:-12285599 | None:intergenic |
| TTTGATTGGTGGCTTTGACA+AGG | 0.607573 | 5_3:+12285418 | Msa0799200:three_prime_UTR |
| GGCATTGGCTAAGAATTGAA+AGG | 0.607613 | 5_3:+12283528 | Msa0799200:five_prime_UTR |
| TTAAAGTGAACATACGTGCT+GGG | 0.612799 | 5_3:+12284550 | Msa0799200:intron |
| GTTGCGACGTTACCATGGAA+AGG | 0.612958 | 5_3:-12283982 | None:intergenic |
| AACGGACGGTGTTAGAAGGA+AGG | 0.613076 | 5_3:-12283769 | None:intergenic |
| TGAACTATGGCAGGATTCGG+TGG | 0.619045 | 5_3:+12285356 | Msa0799200:three_prime_UTR |
| TGGTGGTATGATTTGAGGTG+AGG | 0.620316 | 5_3:+12284706 | Msa0799200:three_prime_UTR |
| AAGGTGGGAATAAACCATGA+TGG | 0.621476 | 5_3:+12284638 | Msa0799200:three_prime_UTR |
| GGTGGCTTTGACAAGGTCAG+CGG | 0.623212 | 5_3:+12285425 | Msa0799200:three_prime_UTR |
| TGAGGTGAGGATGGCAATGA+CGG | 0.637651 | 5_3:+12284719 | Msa0799200:three_prime_UTR |
| GACCAAGATCTCGACAGAGG+AGG | 0.638280 | 5_3:-12283635 | None:intergenic |
| GATGGCAATGACGGTGTCTG+AGG | 0.638923 | 5_3:+12284728 | Msa0799200:three_prime_UTR |
| GAGTTAATAGGAGAAGAAGG+TGG | 0.646429 | 5_3:+12284803 | Msa0799200:three_prime_UTR |
| GCGACTCACTAAGAAAAGGT+GGG | 0.647264 | 5_3:+12284623 | Msa0799200:three_prime_UTR |
| GGATGATTTGAGTGAACGGA+CGG | 0.654168 | 5_3:-12283783 | None:intergenic |
| ATCGATGTCAGGTTTAGATG+CGG | 0.658365 | 5_3:-12283807 | None:intergenic |
| GATGTCAGGTTTAGATGCGG+AGG | 0.668691 | 5_3:-12283804 | None:intergenic |
| CTGATCATGATTTGAGAGCG+AGG | 0.671210 | 5_3:+12284683 | Msa0799200:three_prime_UTR |
| GAGGTGGGAGAGAGCAACGG+AGG | 0.689396 | 5_3:+12284772 | Msa0799200:three_prime_UTR |
| GGGCAGCCATGATAGTGGTG+AGG | 0.692492 | 5_3:+12284753 | Msa0799200:three_prime_UTR |
| AAAATGAAAGATGGTCCAGG+AGG | 0.692780 | 5_3:+12285326 | Msa0799200:three_prime_UTR |
| ATTGACCAAGATCTCGACAG+AGG | 0.716405 | 5_3:-12283638 | None:intergenic |
| AGTAATGTAGTAACACCATG+AGG | 0.717554 | 5_3:-12285808 | None:intergenic |
| ATCATGATTTGAGAGCGAGG+TGG | 0.795850 | 5_3:+12284686 | Msa0799200:three_prime_UTR |
| AGATTGAATTGTGAACAACA+TGG | 0.838604 | 5_3:+12284417 | Msa0799200:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGAAAAAAATAGTATTT+AGG | - | chr5_3:12284020-12284039 | None:intergenic | 15.0% |
| !!! | TTAGTTTCTTTAATTTCAAT+TGG | + | chr5_3:12284081-12284100 | Msa0799200:intron | 15.0% |
| !!! | TAGTTTCTTTAATTTCAATT+GGG | + | chr5_3:12284082-12284101 | Msa0799200:intron | 15.0% |
| !! | AAAAAAAAGATTATAAGGAA+AGG | - | chr5_3:12284905-12284924 | None:intergenic | 15.0% |
| !! | TATATATTCAAGATTGTAAA+TGG | + | chr5_3:12285122-12285141 | Msa0799200:intron | 15.0% |
| !! | ATATATTCAAGATTGTAAAT+GGG | + | chr5_3:12285123-12285142 | Msa0799200:intron | 15.0% |
| !!! | TTAGTTTGAGTTTTATATTT+TGG | + | chr5_3:12285618-12285637 | Msa0799200:three_prime_UTR | 15.0% |
| !!! | ATTATGAACTTTATGTATTT+TGG | + | chr5_3:12285747-12285766 | Msa0799200:three_prime_UTR | 15.0% |
| !!! | ATCATAGATCATTTTTTAAA+AGG | - | chr5_3:12285909-12285928 | None:intergenic | 15.0% |
| !! | TAAAAAATGATCTATGATTA+AGG | + | chr5_3:12285911-12285930 | Msa0799200:three_prime_UTR | 15.0% |
| !! | AAAAAAATAGTATTTAGGAG+AGG | - | chr5_3:12284015-12284034 | None:intergenic | 20.0% |
| !! | AATACACAAAAACAAATCAA+GGG | - | chr5_3:12284166-12284185 | None:intergenic | 20.0% |
| !! | AAAAAAACATAACTTTAGAC+CGG | - | chr5_3:12284189-12284208 | None:intergenic | 20.0% |
| !! | AAGTTACAATTTGACAATAA+AGG | - | chr5_3:12284268-12284287 | None:intergenic | 20.0% |
| !! | AAGAAATGAAAAAGAAAATG+AGG | - | chr5_3:12284860-12284879 | None:intergenic | 20.0% |
| !! | ATATATTTACAAGTGTTTGT+TGG | + | chr5_3:12284981-12285000 | Msa0799200:intron | 20.0% |
| !! | AGAAAAATAAATCACAAAGA+TGG | - | chr5_3:12285098-12285117 | None:intergenic | 20.0% |
| !!! | TTGGTTTCAATCAATTTTTT+TGG | + | chr5_3:12285881-12285900 | Msa0799200:three_prime_UTR | 20.0% |
| ! | ACATGAAGATTGAATGAATT+TGG | - | chr5_3:12283687-12283706 | None:intergenic | 25.0% |
| ! | AAATTCATTCAATCTTCATG+TGG | + | chr5_3:12283686-12283705 | Msa0799200:CDS | 25.0% |
| !!! | TTTAACGAATGTCATTTTGT+GGG | - | chr5_3:12283942-12283961 | None:intergenic | 25.0% |
| !!! | TTTTAACGAATGTCATTTTG+TGG | - | chr5_3:12283943-12283962 | None:intergenic | 25.0% |
| ! | GAATACACAAAAACAAATCA+AGG | - | chr5_3:12284167-12284186 | None:intergenic | 25.0% |
| !!! | TGATTTGTTTTTGTGTATTC+CGG | + | chr5_3:12284167-12284186 | Msa0799200:intron | 25.0% |
| !!! | GGTCTAAAGTTATGTTTTTT+TGG | + | chr5_3:12284188-12284207 | Msa0799200:intron | 25.0% |
| ! | AGTAACATTGACACAAAATA+GGG | - | chr5_3:12284338-12284357 | None:intergenic | 25.0% |
| ! | AAGTAACATTGACACAAAAT+AGG | - | chr5_3:12284339-12284358 | None:intergenic | 25.0% |
| !!! | GAGTTGATTTTATGCTAATT+TGG | + | chr5_3:12284480-12284499 | Msa0799200:intron | 25.0% |
| ! | GGAGGAAAAAAAAGATTATA+AGG | - | chr5_3:12284910-12284929 | None:intergenic | 25.0% |
| ! | GAGAAATAGAAAATGAAAGA+TGG | + | chr5_3:12285317-12285336 | Msa0799200:three_prime_UTR | 25.0% |
| ! | ATTGCTAGTTAGTTGTAAAA+AGG | - | chr5_3:12285478-12285497 | None:intergenic | 25.0% |
| ! | TTATAGTAGATGCTTGATAA+TGG | + | chr5_3:12285502-12285521 | Msa0799200:three_prime_UTR | 25.0% |
| GAGATGAAAACGATAACAAT+GGG | - | chr5_3:12283562-12283581 | None:intergenic | 30.0% | |
| TGAGATGAAAACGATAACAA+TGG | - | chr5_3:12283563-12283582 | None:intergenic | 30.0% | |
| ! | GATTTTTATTCTCAGCACAT+AGG | + | chr5_3:12284058-12284077 | Msa0799200:intron | 30.0% |
| TTTCACTTAGATTTGATCTG+TGG | + | chr5_3:12284214-12284233 | Msa0799200:intron | 30.0% | |
| ! | TCGAAATTTGTGTTTTCAAC+AGG | + | chr5_3:12284363-12284382 | Msa0799200:intron | 30.0% |
| !! | TTTGTGAGTTCTAAGATAGA+TGG | + | chr5_3:12284390-12284409 | Msa0799200:three_prime_UTR | 30.0% |
| AGATTGAATTGTGAACAACA+TGG | + | chr5_3:12284417-12284436 | Msa0799200:three_prime_UTR | 30.0% | |
| ATGCTCTTTAATCCATTTAG+AGG | + | chr5_3:12285017-12285036 | Msa0799200:intron | 30.0% | |
| ! | ATGCAATTGATTCCTCTAAA+TGG | - | chr5_3:12285032-12285051 | None:intergenic | 30.0% |
| AATTAGAGAATGATACCTAC+TGG | - | chr5_3:12285187-12285206 | None:intergenic | 30.0% | |
| GGTATCATTCTCTAATTGTT+TGG | + | chr5_3:12285190-12285209 | Msa0799200:intron | 30.0% | |
| ATAGATAGTATTCTTCTCCA+AGG | + | chr5_3:12285289-12285308 | Msa0799200:intron | 30.0% | |
| ! | TTTCTATTTCTCTACTACCT+TGG | - | chr5_3:12285309-12285328 | None:intergenic | 30.0% |
| ! | TTTGTCAACTATCTCTGAAA+AGG | + | chr5_3:12285530-12285549 | Msa0799200:three_prime_UTR | 30.0% |
| !! | AGTTGATGTACTGAACATTT+TGG | + | chr5_3:12285644-12285663 | Msa0799200:three_prime_UTR | 30.0% |
| ! | ATGATTAAGGTTTGTTCGTT+AGG | + | chr5_3:12285924-12285943 | Msa0799200:three_prime_UTR | 30.0% |
| TGGAGAGAATAAGAGAAAAG+AGG | - | chr5_3:12283667-12283686 | None:intergenic | 35.0% | |
| ! | ATGTTTAGGGTTGAAGTTGT+CGG | - | chr5_3:12283721-12283740 | None:intergenic | 35.0% |
| !!! | TCGCTTCAATCGATGTTTTT+TGG | + | chr5_3:12283869-12283888 | Msa0799200:three_prime_UTR | 35.0% |
| ATCATCTTCCTCATGGAAAT+CGG | - | chr5_3:12283897-12283916 | None:intergenic | 35.0% | |
| TTTCCATGAGGAAGATGATT+CGG | + | chr5_3:12283898-12283917 | Msa0799200:three_prime_UTR | 35.0% | |
| AGTATTTAGGAGAGGAAGAA+GGG | - | chr5_3:12284007-12284026 | None:intergenic | 35.0% | |
| TAGTATTTAGGAGAGGAAGA+AGG | - | chr5_3:12284008-12284027 | None:intergenic | 35.0% | |
| !!! | GGTGAGTTTTGTTTAATCGT+TGG | + | chr5_3:12284438-12284457 | Msa0799200:intron | 35.0% |
| CAAATGAGCATGGAATCAAA+CGG | - | chr5_3:12284521-12284540 | None:intergenic | 35.0% | |
| AGCACAAAATCAAATGAGCA+TGG | - | chr5_3:12284531-12284550 | None:intergenic | 35.0% | |
| TTAAAGTGAACATACGTGCT+GGG | + | chr5_3:12284550-12284569 | Msa0799200:intron | 35.0% | |
| ! | TGATCAGTTCACAGAAGTTT+TGG | - | chr5_3:12284670-12284689 | None:intergenic | 35.0% |
| CCATTCAATAGTGAAGTGAA+GGG | - | chr5_3:12284931-12284950 | None:intergenic | 35.0% | |
| GGAGAAGAATACTATCTATG+AGG | - | chr5_3:12285288-12285307 | None:intergenic | 35.0% | |
| TAGAAAATGAAAGATGGTCC+AGG | + | chr5_3:12285323-12285342 | Msa0799200:three_prime_UTR | 35.0% | |
| ATAGTTCAGTTTAAACCTCC+TGG | - | chr5_3:12285344-12285363 | None:intergenic | 35.0% | |
| AGGAGGTTTAAACTGAACTA+TGG | + | chr5_3:12285343-12285362 | Msa0799200:three_prime_UTR | 35.0% | |
| !! | AGAGGAACGAAGATTTTGAT+TGG | + | chr5_3:12285404-12285423 | Msa0799200:three_prime_UTR | 35.0% |
| !! | CATTTTGGTATAGTTTGTCG+AGG | + | chr5_3:12285659-12285678 | Msa0799200:three_prime_UTR | 35.0% |
| ! | ATTTTGCATTGCATTCCTCA+TGG | + | chr5_3:12285793-12285812 | Msa0799200:three_prime_UTR | 35.0% |
| AGTAATGTAGTAACACCATG+AGG | - | chr5_3:12285811-12285830 | None:intergenic | 35.0% | |
| AGCACACTTGCTCATAAAAA+AGG | - | chr5_3:12285835-12285854 | None:intergenic | 35.0% | |
| TCAATTCTTAGCCAATGCCT+TGG | - | chr5_3:12283527-12283546 | None:intergenic | 40.0% | |
| !! | GGCATTGGCTAAGAATTGAA+AGG | + | chr5_3:12283528-12283547 | Msa0799200:five_prime_UTR | 40.0% |
| AGAAAGGAAGATGATGAGAG+GGG | - | chr5_3:12283602-12283621 | None:intergenic | 40.0% | |
| GAGAAAGGAAGATGATGAGA+GGG | - | chr5_3:12283603-12283622 | None:intergenic | 40.0% | |
| AGAGAAAGGAAGATGATGAG+AGG | - | chr5_3:12283604-12283623 | None:intergenic | 40.0% | |
| ACGACTCAAGCAGATGTTTA+GGG | - | chr5_3:12283734-12283753 | None:intergenic | 40.0% | |
| ATCGATGTCAGGTTTAGATG+CGG | - | chr5_3:12283810-12283829 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTCCGATTTCCATG+AGG | + | chr5_3:12283886-12283905 | Msa0799200:three_prime_UTR | 40.0% |
| CTTAAAGTGAACATACGTGC+TGG | + | chr5_3:12284549-12284568 | Msa0799200:intron | 40.0% | |
| ACGAAAGCAGCATATCACTA+TGG | + | chr5_3:12284584-12284603 | Msa0799200:three_prime_UTR | 40.0% | |
| CGAAAGCAGCATATCACTAT+GGG | + | chr5_3:12284585-12284604 | Msa0799200:three_prime_UTR | 40.0% | |
| AGTTGCGACTCACTAAGAAA+AGG | + | chr5_3:12284619-12284638 | Msa0799200:three_prime_UTR | 40.0% | |
| AAGGTGGGAATAAACCATGA+TGG | + | chr5_3:12284638-12284657 | Msa0799200:three_prime_UTR | 40.0% | |
| !!! | AGTTTTGGAGAGAACCATCA+TGG | - | chr5_3:12284655-12284674 | None:intergenic | 40.0% |
| GAGGAGTTAATAGGAGAAGA+AGG | + | chr5_3:12284800-12284819 | Msa0799200:three_prime_UTR | 40.0% | |
| GAGTTAATAGGAGAAGAAGG+TGG | + | chr5_3:12284803-12284822 | Msa0799200:three_prime_UTR | 40.0% | |
| TTCAATAGTGAAGTGAAGGG+AGG | - | chr5_3:12284928-12284947 | None:intergenic | 40.0% | |
| CCCTTCACTTCACTATTGAA+TGG | + | chr5_3:12284928-12284947 | Msa0799200:intron | 40.0% | |
| GCCATTCAATAGTGAAGTGA+AGG | - | chr5_3:12284932-12284951 | None:intergenic | 40.0% | |
| CTGCATGGCATAAAACTACA+TGG | - | chr5_3:12285154-12285173 | None:intergenic | 40.0% | |
| ACTGGCATCATAAAACTGCA+TGG | - | chr5_3:12285169-12285188 | None:intergenic | 40.0% | |
| !! | TGCAGTTTTATGATGCCAGT+AGG | + | chr5_3:12285169-12285188 | Msa0799200:intron | 40.0% |
| AAAATGAAAGATGGTCCAGG+AGG | + | chr5_3:12285326-12285345 | Msa0799200:three_prime_UTR | 40.0% | |
| GGTTTAAACTGAACTATGGC+AGG | + | chr5_3:12285347-12285366 | Msa0799200:three_prime_UTR | 40.0% | |
| AACTGAACTATGGCAGGATT+CGG | + | chr5_3:12285353-12285372 | Msa0799200:three_prime_UTR | 40.0% | |
| CAAAATCTTCGTTCCTCTTC+TGG | - | chr5_3:12285402-12285421 | None:intergenic | 40.0% | |
| !!! | GGAACGAAGATTTTGATTGG+TGG | + | chr5_3:12285407-12285426 | Msa0799200:three_prime_UTR | 40.0% |
| !! | TTTGATTGGTGGCTTTGACA+AGG | + | chr5_3:12285418-12285437 | Msa0799200:three_prime_UTR | 40.0% |
| TTGAAGACTGCGACAACATA+TGG | + | chr5_3:12285575-12285594 | Msa0799200:three_prime_UTR | 40.0% | |
| CTAAAAGATGCTAAGCGTGT+AGG | - | chr5_3:12285602-12285621 | None:intergenic | 40.0% | |
| !!! | TGTCGAGGTGTTGTGTTTTA+AGG | + | chr5_3:12285674-12285693 | Msa0799200:three_prime_UTR | 40.0% |
| AGGCGTAATCAGAATCATGT+TGG | + | chr5_3:12285694-12285713 | Msa0799200:three_prime_UTR | 40.0% | |
| !!! | TGTTGGTAGTCTGAACCTTT+TGG | + | chr5_3:12285711-12285730 | Msa0799200:three_prime_UTR | 40.0% |
| !! | TAGTCTGAACCTTTTGGTGT+AGG | + | chr5_3:12285717-12285736 | Msa0799200:three_prime_UTR | 40.0% |
| !! | AGTCTGAACCTTTTGGTGTA+GGG | + | chr5_3:12285718-12285737 | Msa0799200:three_prime_UTR | 40.0% |
| ATACCATTCCCTACACCAAA+AGG | - | chr5_3:12285729-12285748 | None:intergenic | 40.0% | |
| GCATTTGGTTGCAACATACT+TGG | + | chr5_3:12285862-12285881 | Msa0799200:three_prime_UTR | 40.0% | |
| ATTGACCAAGATCTCGACAG+AGG | - | chr5_3:12283641-12283660 | None:intergenic | 45.0% | |
| GACGACTCAAGCAGATGTTT+AGG | - | chr5_3:12283735-12283754 | None:intergenic | 45.0% | |
| GGATGATTTGAGTGAACGGA+CGG | - | chr5_3:12283786-12283805 | None:intergenic | 45.0% | |
| CGGAGGATGATTTGAGTGAA+CGG | - | chr5_3:12283790-12283809 | None:intergenic | 45.0% | |
| TGAACAGCAACATCGATGTC+AGG | - | chr5_3:12283821-12283840 | None:intergenic | 45.0% | |
| TCACCGAATCATCTTCCTCA+TGG | - | chr5_3:12283904-12283923 | None:intergenic | 45.0% | |
| AGCATTCTGCAACCTTTCCA+TGG | + | chr5_3:12283970-12283989 | Msa0799200:three_prime_UTR | 45.0% | |
| TGCGACTCACTAAGAAAAGG+TGG | + | chr5_3:12284622-12284641 | Msa0799200:three_prime_UTR | 45.0% | |
| GCGACTCACTAAGAAAAGGT+GGG | + | chr5_3:12284623-12284642 | Msa0799200:three_prime_UTR | 45.0% | |
| CTGATCATGATTTGAGAGCG+AGG | + | chr5_3:12284683-12284702 | Msa0799200:three_prime_UTR | 45.0% | |
| ATCATGATTTGAGAGCGAGG+TGG | + | chr5_3:12284686-12284705 | Msa0799200:three_prime_UTR | 45.0% | |
| ! | TGGTGGTATGATTTGAGGTG+AGG | + | chr5_3:12284706-12284725 | Msa0799200:three_prime_UTR | 45.0% |
| ! | GGTATGATTTGAGGTGAGGA+TGG | + | chr5_3:12284710-12284729 | Msa0799200:three_prime_UTR | 45.0% |
| GAGGTTGGAGAGGAGTTAAT+AGG | + | chr5_3:12284791-12284810 | Msa0799200:three_prime_UTR | 45.0% | |
| TTCAACCAGCTTCAAGGATG+TGG | - | chr5_3:12285560-12285579 | None:intergenic | 45.0% | |
| !! | GAACCTTTTGGTGTAGGGAA+TGG | + | chr5_3:12285723-12285742 | Msa0799200:three_prime_UTR | 45.0% |
| ATGAGCAAGTGTGCTGCATA+TGG | + | chr5_3:12285840-12285859 | Msa0799200:three_prime_UTR | 45.0% | |
| AGTGTGCTGCATATGGCATT+TGG | + | chr5_3:12285847-12285866 | Msa0799200:three_prime_UTR | 45.0% | |
| AGGAAGATGATGAGAGGGGA+GGG | - | chr5_3:12283598-12283617 | None:intergenic | 50.0% | |
| AAGGAAGATGATGAGAGGGG+AGG | - | chr5_3:12283599-12283618 | None:intergenic | 50.0% | |
| AGGCAAGGTAGAGCAGAGAA+AGG | - | chr5_3:12283618-12283637 | None:intergenic | 50.0% | |
| ! | AACGGACGGTGTTAGAAGGA+AGG | - | chr5_3:12283772-12283791 | None:intergenic | 50.0% |
| ! | AGTGAACGGACGGTGTTAGA+AGG | - | chr5_3:12283776-12283795 | None:intergenic | 50.0% |
| GATGTCAGGTTTAGATGCGG+AGG | - | chr5_3:12283807-12283826 | None:intergenic | 50.0% | |
| GTTGCGACGTTACCATGGAA+AGG | - | chr5_3:12283985-12284004 | None:intergenic | 50.0% | |
| ATGATTTGAGAGCGAGGTGG+TGG | + | chr5_3:12284689-12284708 | Msa0799200:three_prime_UTR | 50.0% | |
| ! | CGAGGTGGTGGTATGATTTG+AGG | + | chr5_3:12284701-12284720 | Msa0799200:three_prime_UTR | 50.0% |
| TGAGGTGAGGATGGCAATGA+CGG | + | chr5_3:12284719-12284738 | Msa0799200:three_prime_UTR | 50.0% | |
| !! | AGCCATGATAGTGGTGAGGT+GGG | + | chr5_3:12284757-12284776 | Msa0799200:three_prime_UTR | 50.0% |
| ATAGGAGAAGAAGGTGGCAG+AGG | + | chr5_3:12284809-12284828 | Msa0799200:three_prime_UTR | 50.0% | |
| TAGGAGAAGAAGGTGGCAGA+GGG | + | chr5_3:12284810-12284829 | Msa0799200:three_prime_UTR | 50.0% | |
| TGAACTATGGCAGGATTCGG+TGG | + | chr5_3:12285356-12285375 | Msa0799200:three_prime_UTR | 50.0% | |
| !! | ATGGCAGGATTCGGTGGTTA+CGG | + | chr5_3:12285362-12285381 | Msa0799200:three_prime_UTR | 50.0% |
| GAGAACCACATCCTTGAAGC+TGG | + | chr5_3:12285552-12285571 | Msa0799200:three_prime_UTR | 50.0% | |
| GCAGTCTTCAACCAGCTTCA+AGG | - | chr5_3:12285566-12285585 | None:intergenic | 50.0% | |
| AGATCTCGACAGAGGAGGCA+AGG | - | chr5_3:12283633-12283652 | None:intergenic | 55.0% | |
| TGCCTCCTCTGTCGAGATCT+TGG | + | chr5_3:12283633-12283652 | Msa0799200:CDS | 55.0% | |
| GACCAAGATCTCGACAGAGG+AGG | - | chr5_3:12283638-12283657 | None:intergenic | 55.0% | |
| GAAGGGTTGCGACGTTACCA+TGG | - | chr5_3:12283990-12284009 | None:intergenic | 55.0% | |
| GATGGCAATGACGGTGTCTG+AGG | + | chr5_3:12284728-12284747 | Msa0799200:three_prime_UTR | 55.0% | |
| GCAATGACGGTGTCTGAGGA+CGG | + | chr5_3:12284732-12284751 | Msa0799200:three_prime_UTR | 55.0% | |
| CAATGACGGTGTCTGAGGAC+GGG | + | chr5_3:12284733-12284752 | Msa0799200:three_prime_UTR | 55.0% | |
| !! | CAGCCATGATAGTGGTGAGG+TGG | + | chr5_3:12284756-12284775 | Msa0799200:three_prime_UTR | 55.0% |
| CTCCCACCTCACCACTATCA+TGG | - | chr5_3:12284762-12284781 | None:intergenic | 55.0% | |
| !! | GGTGGCTTTGACAAGGTCAG+CGG | + | chr5_3:12285425-12285444 | Msa0799200:three_prime_UTR | 55.0% |
| AGGACGGGCAGCCATGATAG+TGG | + | chr5_3:12284748-12284767 | Msa0799200:three_prime_UTR | 60.0% | |
| !! | GGGCAGCCATGATAGTGGTG+AGG | + | chr5_3:12284753-12284772 | Msa0799200:three_prime_UTR | 60.0% |
| GGTGAGGTGGGAGAGAGCAA+CGG | + | chr5_3:12284769-12284788 | Msa0799200:three_prime_UTR | 60.0% | |
| TGGGAGAGAGCAACGGAGGT+TGG | + | chr5_3:12284776-12284795 | Msa0799200:three_prime_UTR | 60.0% | |
| GAGAGCAACGGAGGTTGGAG+AGG | + | chr5_3:12284781-12284800 | Msa0799200:three_prime_UTR | 60.0% | |
| GAGAAGAAGGTGGCAGAGGG+AGG | + | chr5_3:12284813-12284832 | Msa0799200:three_prime_UTR | 60.0% | |
| !! | GCAGGATTCGGTGGTTACGG+AGG | + | chr5_3:12285365-12285384 | Msa0799200:three_prime_UTR | 60.0% |
| !! | GGATTCGGTGGTTACGGAGG+TGG | + | chr5_3:12285368-12285387 | Msa0799200:three_prime_UTR | 60.0% |
| GGTGGTTACGGAGGTGGTGA+CGG | + | chr5_3:12285374-12285393 | Msa0799200:three_prime_UTR | 60.0% | |
| ! | GGCTTTGACAAGGTCAGCGG+TGG | + | chr5_3:12285428-12285447 | Msa0799200:three_prime_UTR | 60.0% |
| TGACAAGGTCAGCGGTGGAG+TGG | + | chr5_3:12285433-12285452 | Msa0799200:three_prime_UTR | 60.0% | |
| TGAGAGGGGAGGGAGAGCAG+AGG | - | chr5_3:12283588-12283607 | None:intergenic | 65.0% | |
| GAGGTGGGAGAGAGCAACGG+AGG | + | chr5_3:12284772-12284791 | Msa0799200:three_prime_UTR | 65.0% | |
| !! | GGTGGTGACGGTGCCAGAAG+AGG | + | chr5_3:12285386-12285405 | Msa0799200:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 12283517 | 12286016 | 12283517 | ID=Msa0799200;Name=Msa0799200 |
| chr5_3 | mRNA | 12283517 | 12286016 | 12283517 | ID=Msa0799200-mRNA-1;Parent=Msa0799200;Name=Msa0799200-mRNA-1;_AED=0.14;_eAED=0.14;_QI=34|1|1|1|0|0|4|1294|61 |
| chr5_3 | exon | 12283517 | 12283991 | 12283517 | ID=Msa0799200-mRNA-1:exon:5016;Parent=Msa0799200-mRNA-1 |
| chr5_3 | exon | 12284385 | 12284438 | 12284385 | ID=Msa0799200-mRNA-1:exon:5017;Parent=Msa0799200-mRNA-1 |
| chr5_3 | exon | 12284556 | 12284834 | 12284556 | ID=Msa0799200-mRNA-1:exon:5018;Parent=Msa0799200-mRNA-1 |
| chr5_3 | exon | 12285311 | 12286016 | 12285311 | ID=Msa0799200-mRNA-1:exon:5019;Parent=Msa0799200-mRNA-1 |
| chr5_3 | five_prime_UTR | 12283517 | 12283550 | 12283517 | ID=Msa0799200-mRNA-1:five_prime_utr;Parent=Msa0799200-mRNA-1 |
| chr5_3 | CDS | 12283551 | 12283736 | 12283551 | ID=Msa0799200-mRNA-1:cds;Parent=Msa0799200-mRNA-1 |
| chr5_3 | three_prime_UTR | 12283737 | 12283991 | 12283737 | ID=Msa0799200-mRNA-1:three_prime_utr;Parent=Msa0799200-mRNA-1 |
| chr5_3 | three_prime_UTR | 12284385 | 12284438 | 12284385 | ID=Msa0799200-mRNA-1:three_prime_utr;Parent=Msa0799200-mRNA-1 |
| chr5_3 | three_prime_UTR | 12284556 | 12284834 | 12284556 | ID=Msa0799200-mRNA-1:three_prime_utr;Parent=Msa0799200-mRNA-1 |
| chr5_3 | three_prime_UTR | 12285311 | 12286016 | 12285311 | ID=Msa0799200-mRNA-1:three_prime_utr;Parent=Msa0799200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
