Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039920 | sp|P11432|ELI_PEA | 78.894 | 199 | 36 | 2 | 1 | 196 | 1 | 196 | 5.17e-100 | 290 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039920 | Q94F86 | 96.482 | 199 | 4 | 1 | 1 | 196 | 1 | 199 | 2.17e-132 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005160 | Msa0039920 | 0.811490 | 6.821756e-51 | -8.615850e-47 |
| Msa0006820 | Msa0039920 | 0.814791 | 1.286871e-51 | -8.615850e-47 |
| Msa0015720 | Msa0039920 | 0.812079 | 5.078609e-51 | -8.615850e-47 |
| Msa0016110 | Msa0039920 | 0.804870 | 1.755262e-49 | -8.615850e-47 |
| Msa0016160 | Msa0039920 | 0.807667 | 4.519885e-50 | -8.615850e-47 |
| Msa0018870 | Msa0039920 | 0.800622 | 1.321989e-48 | -8.615850e-47 |
| Msa0021710 | Msa0039920 | 0.812461 | 4.190080e-51 | -8.615850e-47 |
| Msa0032450 | Msa0039920 | 0.850976 | 1.198545e-60 | -8.615850e-47 |
| Msa0039920 | Msa0040090 | 0.944184 | 3.106900e-103 | -8.615850e-47 |
| Msa0039920 | Msa0041780 | 0.804088 | 2.554468e-49 | -8.615850e-47 |
| Msa0039920 | Msa0046050 | 0.814069 | 1.859130e-51 | -8.615850e-47 |
| Msa0039920 | Msa0050500 | 0.810802 | 9.614429e-51 | -8.615850e-47 |
| Msa0039920 | Msa0057740 | 0.838546 | 2.697348e-57 | -8.615850e-47 |
| Msa0039920 | Msa0080620 | 0.826559 | 2.538382e-54 | -8.615850e-47 |
| Msa0039920 | Msa0087580 | 0.946431 | 4.681184e-105 | -8.615850e-47 |
| Msa0039920 | Msa0087780 | 0.930549 | 1.392113e-93 | -8.615850e-47 |
| Msa0039920 | Msa0087790 | 0.939406 | 1.341367e-99 | -8.615850e-47 |
| Msa0039920 | Msa0096020 | 0.862573 | 4.607140e-64 | -8.615850e-47 |
| Msa0039920 | Msa0096510 | 0.803167 | 3.966715e-49 | -8.615850e-47 |
| Msa0039920 | Msa0096830 | 0.803827 | 2.894826e-49 | -8.615850e-47 |
| Msa0039920 | Msa0098700 | 0.827767 | 1.304130e-54 | -8.615850e-47 |
| Msa0039920 | Msa0103060 | 0.829825 | 4.143536e-55 | -8.615850e-47 |
| Msa0039920 | Msa0109870 | 0.814014 | 1.911515e-51 | -8.615850e-47 |
| Msa0039920 | Msa0116950 | 0.844885 | 5.731221e-59 | -8.615850e-47 |
| Msa0039920 | Msa0132920 | 0.812700 | 3.715577e-51 | -8.615850e-47 |
| Msa0039920 | Msa0133450 | 0.825479 | 4.584106e-54 | -8.615850e-47 |
| Msa0039920 | Msa0134300 | 0.947026 | 1.494394e-105 | -8.615850e-47 |
| Msa0039920 | Msa0134380 | 0.924910 | 3.741480e-90 | -8.615850e-47 |
| Msa0039920 | Msa0134390 | 0.906593 | 1.256726e-80 | -8.615850e-47 |
| Msa0039920 | Msa0134400 | 0.913992 | 3.229730e-84 | -8.615850e-47 |
| Msa0039920 | Msa0134410 | 0.874314 | 7.438397e-68 | -8.615850e-47 |
| Msa0039920 | Msa0134420 | 0.940238 | 3.284006e-100 | -8.615850e-47 |
| Msa0039920 | Msa0137010 | 0.808330 | 3.265907e-50 | -8.615850e-47 |
| Msa0039920 | Msa0156780 | 0.813708 | 2.232648e-51 | -8.615850e-47 |
| Msa0039920 | Msa0160470 | 0.833187 | 6.159487e-56 | -8.615850e-47 |
| Msa0039920 | Msa0175720 | 0.862930 | 3.574164e-64 | -8.615850e-47 |
| Msa0039920 | Msa0180590 | 0.908000 | 2.755969e-81 | -8.615850e-47 |
| Msa0039920 | Msa0180600 | 0.945526 | 2.589116e-104 | -8.615850e-47 |
| Msa0039920 | Msa0180780 | 0.952726 | 1.299747e-110 | -8.615850e-47 |
| Msa0039920 | Msa0186510 | 0.860565 | 1.890528e-63 | -8.615850e-47 |
| Msa0039920 | Msa0197730 | 0.841843 | 3.716735e-58 | -8.615850e-47 |
| Msa0039920 | Msa0210880 | 0.814351 | 1.610518e-51 | -8.615850e-47 |
| Msa0039920 | Msa0216010 | 0.811796 | 5.853452e-51 | -8.615850e-47 |
| Msa0039920 | Msa0230980 | 0.842395 | 2.654609e-58 | -8.615850e-47 |
| Msa0039920 | Msa0238960 | 0.805666 | 1.195707e-49 | -8.615850e-47 |
| Msa0039920 | Msa0243160 | 0.836177 | 1.090024e-56 | -8.615850e-47 |
| Msa0039920 | Msa0256170 | 0.800599 | 1.336137e-48 | -8.615850e-47 |
| Msa0039920 | Msa0270460 | 0.842353 | 2.722813e-58 | -8.615850e-47 |
| Msa0039920 | Msa0290600 | 0.813775 | 2.157903e-51 | -8.615850e-47 |
| Msa0039920 | Msa0293000 | 0.816250 | 6.092732e-52 | -8.615850e-47 |
| Msa0039920 | Msa0309060 | 0.835671 | 1.465222e-56 | -8.615850e-47 |
| Msa0039920 | Msa0316720 | 0.804885 | 1.742587e-49 | -8.615850e-47 |
| Msa0039920 | Msa0317360 | 0.817940 | 2.541312e-52 | -8.615850e-47 |
| Msa0039920 | Msa0335860 | 0.820378 | 7.078367e-53 | -8.615850e-47 |
| Msa0039920 | Msa0358720 | 0.822251 | 2.617196e-53 | -8.615850e-47 |
| Msa0039920 | Msa0377460 | 0.800340 | 1.509100e-48 | -8.615850e-47 |
| Msa0039920 | Msa0378670 | 0.834269 | 3.304898e-56 | -8.615850e-47 |
| Msa0039920 | Msa0378700 | 0.852289 | 5.090328e-61 | -8.615850e-47 |
| Msa0039920 | Msa0385770 | 0.842468 | 2.538804e-58 | -8.615850e-47 |
| Msa0039920 | Msa0391160 | 0.820032 | 8.497728e-53 | -8.615850e-47 |
| Msa0039920 | Msa0393140 | 0.812608 | 3.890945e-51 | -8.615850e-47 |
| Msa0039920 | Msa0403720 | 0.802475 | 5.512891e-49 | -8.615850e-47 |
| Msa0039920 | Msa0419040 | 0.802056 | 6.722094e-49 | -8.615850e-47 |
| Msa0039920 | Msa0423110 | 0.816654 | 4.947538e-52 | -8.615850e-47 |
| Msa0039920 | Msa0426860 | 0.844508 | 7.241167e-59 | -8.615850e-47 |
| Msa0039920 | Msa0426890 | 0.834460 | 2.959390e-56 | -8.615850e-47 |
| Msa0039920 | Msa0427050 | 0.810421 | 1.162546e-50 | -8.615850e-47 |
| Msa0039920 | Msa0428310 | 0.814871 | 1.235347e-51 | -8.615850e-47 |
| Msa0039920 | Msa0428330 | 0.837161 | 6.120173e-57 | -8.615850e-47 |
| Msa0039920 | Msa0430040 | 0.800283 | 1.550188e-48 | -8.615850e-47 |
| Msa0039920 | Msa0431940 | 0.826678 | 2.377722e-54 | -8.615850e-47 |
| Msa0039920 | Msa0433270 | 0.854924 | 8.900918e-62 | -8.615850e-47 |
| Msa0039920 | Msa0437790 | 0.819208 | 1.310249e-52 | -8.615850e-47 |
| Msa0039920 | Msa0456480 | 0.861403 | 1.051154e-63 | -8.615850e-47 |
| Msa0039920 | Msa0469270 | 0.826976 | 2.018370e-54 | -8.615850e-47 |
| Msa0039920 | Msa0469840 | 0.803095 | 4.104270e-49 | -8.615850e-47 |
| Msa0039920 | Msa0473450 | 0.802661 | 5.045971e-49 | -8.615850e-47 |
| Msa0039920 | Msa0481050 | 0.806029 | 1.002903e-49 | -8.615850e-47 |
| Msa0039920 | Msa0500490 | 0.820910 | 5.343683e-53 | -8.615850e-47 |
| Msa0039920 | Msa0510550 | 0.805724 | 1.162417e-49 | -8.615850e-47 |
| Msa0039920 | Msa0511600 | 0.865181 | 7.111421e-65 | -8.615850e-47 |
| Msa0039920 | Msa0515420 | 0.812025 | 5.216559e-51 | -8.615850e-47 |
| Msa0039920 | Msa0519060 | 0.818069 | 2.375896e-52 | -8.615850e-47 |
| Msa0039920 | Msa0520810 | 0.810558 | 1.085824e-50 | -8.615850e-47 |
| Msa0039920 | Msa0521940 | -0.828874 | 7.054917e-55 | -8.615850e-47 |
| Msa0039920 | Msa0532880 | 0.801210 | 1.002476e-48 | -8.615850e-47 |
| Msa0039920 | Msa0534420 | 0.812975 | 3.234154e-51 | -8.615850e-47 |
| Msa0039920 | Msa0549330 | 0.802566 | 5.278462e-49 | -8.615850e-47 |
| Msa0039920 | Msa0558890 | 0.806835 | 6.783125e-50 | -8.615850e-47 |
| Msa0039920 | Msa0568490 | 0.820042 | 8.452725e-53 | -8.615850e-47 |
| Msa0039920 | Msa0580540 | 0.877135 | 8.008416e-69 | -8.615850e-47 |
| Msa0039920 | Msa0581240 | 0.812010 | 5.255466e-51 | -8.615850e-47 |
| Msa0039920 | Msa0595780 | 0.815336 | 9.739084e-52 | -8.615850e-47 |
| Msa0039920 | Msa0610360 | 0.802676 | 5.009766e-49 | -8.615850e-47 |
| Msa0039920 | Msa0615850 | 0.844330 | 8.084138e-59 | -8.615850e-47 |
| Msa0039920 | Msa0617120 | 0.845412 | 4.126619e-59 | -8.615850e-47 |
| Msa0039920 | Msa0621780 | 0.870646 | 1.247101e-66 | -8.615850e-47 |
| Msa0039920 | Msa0635990 | 0.800735 | 1.253435e-48 | -8.615850e-47 |
| Msa0039920 | Msa0638040 | 0.811327 | 7.400365e-51 | -8.615850e-47 |
| Msa0039920 | Msa0650890 | 0.802579 | 5.246497e-49 | -8.615850e-47 |
| Msa0039920 | Msa0659640 | 0.813135 | 2.983310e-51 | -8.615850e-47 |
| Msa0039920 | Msa0665040 | 0.800994 | 1.109763e-48 | -8.615850e-47 |
| Msa0039920 | Msa0677110 | 0.818154 | 2.273070e-52 | -8.615850e-47 |
| Msa0039920 | Msa0677250 | 0.803284 | 3.750832e-49 | -8.615850e-47 |
| Msa0039920 | Msa0691100 | 0.811870 | 5.639242e-51 | -8.615850e-47 |
| Msa0039920 | Msa0698900 | 0.853411 | 2.432279e-61 | -8.615850e-47 |
| Msa0039920 | Msa0705130 | 0.815828 | 7.568024e-52 | -8.615850e-47 |
| Msa0039920 | Msa0712670 | 0.824189 | 9.237205e-54 | -8.615850e-47 |
| Msa0039920 | Msa0714200 | 0.805485 | 1.304656e-49 | -8.615850e-47 |
| Msa0039920 | Msa0736930 | 0.817106 | 3.915483e-52 | -8.615850e-47 |
| Msa0039920 | Msa0739610 | 0.832847 | 7.485019e-56 | -8.615850e-47 |
| Msa0039920 | Msa0748980 | 0.819774 | 9.735258e-53 | -8.615850e-47 |
| Msa0039920 | Msa0752830 | 0.814109 | 1.821724e-51 | -8.615850e-47 |
| Msa0039920 | Msa0754350 | 0.867955 | 9.338303e-66 | -8.615850e-47 |
| Msa0039920 | Msa0754790 | 0.810768 | 9.780155e-51 | -8.615850e-47 |
| Msa0039920 | Msa0754840 | 0.812181 | 4.825401e-51 | -8.615850e-47 |
| Msa0039920 | Msa0756440 | 0.835511 | 1.608347e-56 | -8.615850e-47 |
| Msa0039920 | Msa0763350 | 0.805129 | 1.549651e-49 | -8.615850e-47 |
| Msa0039920 | Msa0766880 | 0.810620 | 1.053089e-50 | -8.615850e-47 |
| Msa0039920 | Msa0770020 | 0.800434 | 1.444134e-48 | -8.615850e-47 |
| Msa0039920 | Msa0776290 | 0.814609 | 1.412284e-51 | -8.615850e-47 |
| Msa0039920 | Msa0776590 | 0.844071 | 9.483227e-59 | -8.615850e-47 |
| Msa0039920 | Msa0793060 | 0.800420 | 1.453427e-48 | -8.615850e-47 |
| Msa0039920 | Msa0795710 | 0.869629 | 2.682933e-66 | -8.615850e-47 |
| Msa0039920 | Msa0796610 | 0.813621 | 2.332485e-51 | -8.615850e-47 |
| Msa0039920 | Msa0813630 | 0.800367 | 1.490059e-48 | -8.615850e-47 |
| Msa0039920 | Msa0824770 | 0.803870 | 2.835272e-49 | -8.615850e-47 |
| Msa0039920 | Msa0825520 | 0.822846 | 1.903968e-53 | -8.615850e-47 |
| Msa0039920 | Msa0828810 | 0.811782 | 5.891984e-51 | -8.615850e-47 |
| Msa0039920 | Msa0833450 | 0.840931 | 6.458536e-58 | -8.615850e-47 |
| Msa0039920 | Msa0833910 | 0.852606 | 4.135288e-61 | -8.615850e-47 |
| Msa0039920 | Msa0834160 | 0.843703 | 1.190632e-58 | -8.615850e-47 |
| Msa0039920 | Msa0835550 | 0.830432 | 2.946272e-55 | -8.615850e-47 |
| Msa0039920 | Msa0854190 | 0.835485 | 1.632679e-56 | -8.615850e-47 |
| Msa0039920 | Msa0864730 | 0.822657 | 2.106876e-53 | -8.615850e-47 |
| Msa0039920 | Msa0864750 | 0.819410 | 1.178761e-52 | -8.615850e-47 |
| Msa0039920 | Msa0865280 | 0.806492 | 8.012649e-50 | -8.615850e-47 |
| Msa0039920 | Msa0866510 | 0.831887 | 1.293693e-55 | -8.615850e-47 |
| Msa0039920 | Msa0873070 | 0.808493 | 3.015006e-50 | -8.615850e-47 |
| Msa0039920 | Msa0876030 | 0.809099 | 2.236527e-50 | -8.615850e-47 |
| Msa0039920 | Msa0899080 | 0.823722 | 1.188722e-53 | -8.615850e-47 |
| Msa0039920 | Msa0899730 | 0.803142 | 4.013628e-49 | -8.615850e-47 |
| Msa0039920 | Msa0906310 | 0.811419 | 7.066079e-51 | -8.615850e-47 |
| Msa0039920 | Msa0912110 | 0.801648 | 8.154585e-49 | -8.615850e-47 |
| Msa0039920 | Msa0913120 | 0.818686 | 1.722277e-52 | -8.615850e-47 |
| Msa0039920 | Msa0927890 | 0.822733 | 2.022829e-53 | -8.615850e-47 |
| Msa0039920 | Msa0930950 | 0.830808 | 2.383210e-55 | -8.615850e-47 |
| Msa0039920 | Msa0950410 | 0.810613 | 1.056481e-50 | -8.615850e-47 |
| Msa0039920 | Msa0961200 | 0.804459 | 2.138222e-49 | -8.615850e-47 |
| Msa0039920 | Msa0966410 | 0.838603 | 2.607291e-57 | -8.615850e-47 |
| Msa0039920 | Msa0967260 | 0.808014 | 3.813002e-50 | -8.615850e-47 |
| Msa0039920 | Msa0975460 | 0.802923 | 4.456229e-49 | -8.615850e-47 |
| Msa0039920 | Msa0986620 | 0.802334 | 5.893282e-49 | -8.615850e-47 |
| Msa0039920 | Msa0998940 | 0.806583 | 7.665618e-50 | -8.615850e-47 |
| Msa0039920 | Msa0999480 | 0.805032 | 1.623437e-49 | -8.615850e-47 |
| Msa0039920 | Msa1019370 | 0.831638 | 1.490238e-55 | -8.615850e-47 |
| Msa0039920 | Msa1028720 | 0.803293 | 3.735797e-49 | -8.615850e-47 |
| Msa0039920 | Msa1033160 | 0.800007 | 1.763287e-48 | -8.615850e-47 |
| Msa0039920 | Msa1040390 | 0.823011 | 1.742642e-53 | -8.615850e-47 |
| Msa0039920 | Msa1057320 | 0.808137 | 3.589817e-50 | -8.615850e-47 |
| Msa0039920 | Msa1070930 | 0.802058 | 6.717372e-49 | -8.615850e-47 |
| Msa0039920 | Msa1083140 | 0.819454 | 1.151412e-52 | -8.615850e-47 |
| Msa0039920 | Msa1088740 | 0.811274 | 7.598372e-51 | -8.615850e-47 |
| Msa0039920 | Msa1102200 | 0.840744 | 7.231815e-58 | -8.615850e-47 |
| Msa0039920 | Msa1124440 | 0.804119 | 2.517103e-49 | -8.615850e-47 |
| Msa0039920 | Msa1127900 | 0.815632 | 8.370985e-52 | -8.615850e-47 |
| Msa0039920 | Msa1130660 | 0.823353 | 1.449581e-53 | -8.615850e-47 |
| Msa0039920 | Msa1132540 | 0.804049 | 2.602521e-49 | -8.615850e-47 |
| Msa0039920 | Msa1133440 | 0.802529 | 5.373048e-49 | -8.615850e-47 |
| Msa0039920 | Msa1138600 | 0.802777 | 4.775130e-49 | -8.615850e-47 |
| Msa0039920 | Msa1140480 | 0.811738 | 6.024072e-51 | -8.615850e-47 |
| Msa0039920 | Msa1147870 | 0.809902 | 1.503850e-50 | -8.615850e-47 |
| Msa0039920 | Msa1165810 | 0.824513 | 7.750599e-54 | -8.615850e-47 |
| Msa0039920 | Msa1173410 | 0.821125 | 4.768602e-53 | -8.615850e-47 |
| Msa0039920 | Msa1187810 | 0.828679 | 7.860379e-55 | -8.615850e-47 |
| Msa0039920 | Msa1195860 | 0.839640 | 1.404184e-57 | -8.615850e-47 |
| Msa0039920 | Msa1203840 | 0.836905 | 7.113686e-57 | -8.615850e-47 |
| Msa0039920 | Msa1203860 | 0.859643 | 3.589057e-63 | -8.615850e-47 |
| Msa0039920 | Msa1209240 | 0.832607 | 8.585454e-56 | -8.615850e-47 |
| Msa0039920 | Msa1209790 | 0.800837 | 1.194687e-48 | -8.615850e-47 |
| Msa0039920 | Msa1209800 | 0.801744 | 7.793974e-49 | -8.615850e-47 |
| Msa0039920 | Msa1218720 | 0.809959 | 1.461800e-50 | -8.615850e-47 |
| Msa0039920 | Msa1219060 | 0.809723 | 1.643382e-50 | -8.615850e-47 |
| Msa0039920 | Msa1220740 | 0.835115 | 2.024754e-56 | -8.615850e-47 |
| Msa0039920 | Msa1242990 | 0.826929 | 2.071070e-54 | -8.615850e-47 |
| Msa0039920 | Msa1243630 | 0.825604 | 4.280994e-54 | -8.615850e-47 |
| Msa0039920 | Msa1244220 | 0.827670 | 1.376199e-54 | -8.615850e-47 |
| Msa0039920 | Msa1244660 | 0.816545 | 5.231912e-52 | -8.615850e-47 |
| Msa0039920 | Msa1248400 | 0.818287 | 2.120828e-52 | -8.615850e-47 |
| Msa0039920 | Msa1263590 | 0.802693 | 4.970806e-49 | -8.615850e-47 |
| Msa0039920 | Msa1283120 | 0.866948 | 1.962023e-65 | -8.615850e-47 |
| Msa0039920 | Msa1286910 | 0.810546 | 1.092451e-50 | -8.615850e-47 |
| Msa0039920 | Msa1289340 | 0.807582 | 4.710188e-50 | -8.615850e-47 |
| Msa0039920 | Msa1295220 | 0.808968 | 2.386209e-50 | -8.615850e-47 |
| Msa0039920 | Msa1296270 | 0.813248 | 2.817903e-51 | -8.615850e-47 |
| Msa0039920 | Msa1308010 | 0.811184 | 7.947408e-51 | -8.615850e-47 |
| Msa0039920 | Msa1323920 | 0.814690 | 1.354958e-51 | -8.615850e-47 |
| Msa0039920 | Msa1327040 | 0.830171 | 3.412643e-55 | -8.615850e-47 |
| Msa0039920 | Msa1327820 | 0.800721 | 1.261938e-48 | -8.615850e-47 |
| Msa0039920 | Msa1330910 | 0.843323 | 1.503532e-58 | -8.615850e-47 |
| Msa0039920 | Msa1332690 | 0.800374 | 1.485228e-48 | -8.615850e-47 |
| Msa0039920 | Msa1334650 | 0.828752 | 7.551109e-55 | -8.615850e-47 |
| Msa0039920 | Msa1335210 | 0.821309 | 4.325009e-53 | -8.615850e-47 |
| Msa0039920 | Msa1342400 | 0.824560 | 7.555456e-54 | -8.615850e-47 |
| Msa0039920 | Msa1348330 | -0.843879 | 1.068101e-58 | -8.615850e-47 |
| Msa0039920 | Msa1349640 | 0.808177 | 3.519944e-50 | -8.615850e-47 |
| Msa0039920 | Msa1349850 | 0.836071 | 1.159870e-56 | -8.615850e-47 |
| Msa0039920 | Msa1356730 | 0.821997 | 2.998249e-53 | -8.615850e-47 |
| Msa0039920 | Msa1364520 | 0.819909 | 9.065606e-53 | -8.615850e-47 |
| Msa0039920 | Msa1364850 | 0.869136 | 3.881815e-66 | -8.615850e-47 |
| Msa0039920 | Msa1365210 | 0.841122 | 5.753989e-58 | -8.615850e-47 |
| Msa0039920 | Msa1368660 | 0.820626 | 6.208625e-53 | -8.615850e-47 |
| Msa0039920 | Msa1369390 | 0.812177 | 4.833142e-51 | -8.615850e-47 |
| Msa0039920 | Msa1373390 | 0.819612 | 1.059863e-52 | -8.615850e-47 |
| Msa0039920 | Msa1384620 | 0.823279 | 1.509210e-53 | -8.615850e-47 |
| Msa0039920 | Msa1384980 | 0.805427 | 1.342239e-49 | -8.615850e-47 |
| Msa0039920 | Msa1388070 | 0.844623 | 6.741791e-59 | -8.615850e-47 |
| Msa0039920 | Msa1403950 | 0.873240 | 1.714006e-67 | -8.615850e-47 |
| Msa0039920 | Msa1413220 | 0.819945 | 8.895840e-53 | -8.615850e-47 |
| Msa0039920 | Msa1420600 | 0.827648 | 1.393077e-54 | -8.615850e-47 |
| Msa0039920 | Msa1425540 | 0.816853 | 4.464326e-52 | -8.615850e-47 |
| Msa0039920 | Msa1430630 | 0.814449 | 1.532391e-51 | -8.615850e-47 |
| Msa0039920 | Msa1435470 | 0.803123 | 4.051129e-49 | -8.615850e-47 |
| Msa0039920 | Msa1435690 | 0.873973 | 9.705052e-68 | -8.615850e-47 |
| Msa0039920 | Msa1446220 | 0.806002 | 1.016144e-49 | -8.615850e-47 |
| Msa0039920 | Msa1451690 | 0.863946 | 1.731566e-64 | -8.615850e-47 |
| Msa0039920 | Msa1458920 | 0.810522 | 1.105387e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039920 | MtrunA17_Chr1g0204671 | 94.500 | 200 | 7 | 2 | 1 | 196 | 1 | 200 | 7.95e-133 | 370 |
| Msa0039920 | MtrunA17_Chr1g0204681 | 90.000 | 180 | 13 | 2 | 20 | 196 | 20 | 197 | 2.06e-106 | 303 |
| Msa0039920 | MtrunA17_Chr1g0204521 | 85.556 | 180 | 21 | 2 | 20 | 196 | 21 | 198 | 1.51e-103 | 296 |
| Msa0039920 | MtrunA17_Chr1g0204691 | 79.592 | 196 | 26 | 2 | 1 | 196 | 1 | 182 | 1.29e-96 | 278 |
| Msa0039920 | MtrunA17_Chr1g0204721 | 80.000 | 180 | 19 | 3 | 20 | 196 | 21 | 186 | 1.44e-96 | 278 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0039920 | AT3G22840.1 | 55.276 | 199 | 82 | 5 | 1 | 196 | 1 | 195 | 2.45e-62 | 192 |
| Msa0039920 | AT4G14690.1 | 52.261 | 199 | 86 | 4 | 1 | 196 | 1 | 193 | 1.59e-57 | 180 |
Find 85 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGCTGATGGTGGTGTAAT+TGG | 0.245963 | 1_1:+69908387 | None:intergenic |
| TCACTTCACTACACCTTAGA+TGG | 0.287308 | 1_1:+69908838 | None:intergenic |
| TGGTGGAATTCCATGGTTCT+TGG | 0.288858 | 1_1:-69908077 | Msa0039920:CDS |
| GTTGTTTATATAGACTAAAA+TGG | 0.292529 | 1_1:+69908891 | None:intergenic |
| GGTGGAATTCCATGGTTCTT+GGG | 0.299911 | 1_1:-69908076 | Msa0039920:CDS |
| GGTTTGTTTGATCAAATATC+TGG | 0.314167 | 1_1:-69908100 | Msa0039920:CDS |
| CTACCAACCTTAACCATCTA+AGG | 0.316626 | 1_1:-69908851 | Msa0039920:five_prime_UTR |
| ATGCATTGTGAGGGATATTA+TGG | 0.340683 | 1_1:+69908915 | None:intergenic |
| GTTGGTTGTGGTTGTGGTGG+TGG | 0.344690 | 1_1:+69908360 | None:intergenic |
| TGTGGTTGTGGTGGTGGAGT+TGG | 0.352890 | 1_1:+69908366 | None:intergenic |
| ATTGGGTCTACAGGCACCTT+TGG | 0.360861 | 1_1:+69908405 | None:intergenic |
| CACTACACCTTAGATGGTTA+AGG | 0.368917 | 1_1:+69908844 | None:intergenic |
| TATGTTGGGTTTGATTGCTT+TGG | 0.370659 | 1_1:-69907936 | Msa0039920:CDS |
| TATTATCAAGAGAATTCAAT+TGG | 0.371788 | 1_1:-69907761 | Msa0039920:three_prime_UTR |
| AATGGAAGGTTGGCTATGAT+TGG | 0.393839 | 1_1:-69908163 | Msa0039920:CDS |
| ATACCTCAGATCCCCATTCA+TGG | 0.410306 | 1_1:-69907615 | Msa0039920:three_prime_UTR |
| CCATTGATTCTCTCAGGTGC+TGG | 0.411549 | 1_1:+69908181 | None:intergenic |
| CAAGCATTTCTTCTCAAGCT+TGG | 0.413181 | 1_1:+69908644 | None:intergenic |
| GGTGGTGGAGTTGGTGCTGA+TGG | 0.417357 | 1_1:+69908375 | None:intergenic |
| TTAGATGCAGTTGAAATAGA+AGG | 0.434475 | 1_1:-69907681 | Msa0039920:three_prime_UTR |
| AACCTTCCATTGATTCTCTC+AGG | 0.436061 | 1_1:+69908175 | None:intergenic |
| GTGCTGATGGTGGTGTAATT+GGG | 0.440700 | 1_1:+69908388 | None:intergenic |
| ATATGAAAAGTGGAAAGAAA+TGG | 0.440968 | 1_1:-69907653 | Msa0039920:three_prime_UTR |
| TAATTAGAAACTCCATGAAT+GGG | 0.444349 | 1_1:+69907603 | None:intergenic |
| GTTCAAATTGTATTATCATC+AGG | 0.447050 | 1_1:+69907511 | None:intergenic |
| GTATAGGTTGGTTGTGGTTG+TGG | 0.448474 | 1_1:+69908354 | None:intergenic |
| GAATGGTAGAATTGCTATGT+TGG | 0.450278 | 1_1:-69907951 | Msa0039920:CDS |
| GAAGGTAAACATATGAAAAG+TGG | 0.450859 | 1_1:-69907663 | Msa0039920:three_prime_UTR |
| ATTATCAAGAGAATTCAATT+GGG | 0.452668 | 1_1:-69907760 | Msa0039920:three_prime_UTR |
| CACCTTTGGTGAACGTGTAT+AGG | 0.459386 | 1_1:+69908338 | None:intergenic |
| TTAATTAGAAACTCCATGAA+TGG | 0.465199 | 1_1:+69907602 | None:intergenic |
| GTGGAATTCCATGGTTCTTG+GGG | 0.468120 | 1_1:-69908075 | Msa0039920:CDS |
| GGTGGAGTTGGTGCTGATGG+TGG | 0.468618 | 1_1:+69908378 | None:intergenic |
| GTTAATGTTTATAGAATTTG+CGG | 0.478581 | 1_1:-69907855 | Msa0039920:three_prime_UTR |
| CATTAAGAACTTATAATCAA+TGG | 0.480276 | 1_1:-69908756 | Msa0039920:exon |
| GAAATGCTTGCCTCAAAGTT+CGG | 0.480582 | 1_1:-69908631 | Msa0039920:CDS |
| CGGATTTGATGGCATTTGGT+GGG | 0.485102 | 1_1:-69908204 | Msa0039920:CDS |
| TCGGATTTGATGGCATTTGG+TGG | 0.487791 | 1_1:-69908205 | Msa0039920:CDS |
| GGTAGGTATAGCATTGAAGA+TGG | 0.490124 | 1_1:+69908869 | None:intergenic |
| AATGGTAGAATTGCTATGTT+GGG | 0.492247 | 1_1:-69907950 | Msa0039920:CDS |
| ATGGAGTTTCTAATTAACAT+AGG | 0.494734 | 1_1:-69907596 | Msa0039920:three_prime_UTR |
| TCTAGGCCTGCTAGAAATGC+TGG | 0.515845 | 1_1:+69908694 | None:intergenic |
| GGTGGTGTAATTGGGTCTAC+AGG | 0.516474 | 1_1:+69908396 | None:intergenic |
| CCAGCACCTGAGAGAATCAA+TGG | 0.516939 | 1_1:-69908181 | Msa0039920:CDS |
| CAGCCATGGACCGAACTTTG+AGG | 0.520058 | 1_1:+69908621 | None:intergenic |
| TAGGTTGGTTGTGGTTGTGG+TGG | 0.520190 | 1_1:+69908357 | None:intergenic |
| AGTGTGGAGTCTAAGTCAAA+AGG | 0.525000 | 1_1:-69908001 | Msa0039920:CDS |
| TAATGTGTTGAGCGCTCAAA+TGG | 0.525410 | 1_1:+69907536 | None:intergenic |
| CGAAAACATTACCTCAGCCA+TGG | 0.528935 | 1_1:+69908607 | None:intergenic |
| CAAAGTTCGGTCCATGGCTG+AGG | 0.533870 | 1_1:-69908618 | Msa0039920:intron |
| GGATGGCTTTGTAAAACACT+TGG | 0.536418 | 1_1:+69908808 | None:intergenic |
| GAGCGCTCAAATGGTTGCAC+AGG | 0.540127 | 1_1:+69907545 | None:intergenic |
| TTGCCTCAAAGTTCGGTCCA+TGG | 0.544126 | 1_1:-69908624 | Msa0039920:CDS |
| GGTGGAGATAGCAAATGGAC+AGG | 0.547189 | 1_1:-69908122 | Msa0039920:CDS |
| CCATGACCAGCATTTCTAGC+AGG | 0.549312 | 1_1:-69908700 | Msa0039920:CDS |
| CCTGCTAGAAATGCTGGTCA+TGG | 0.550870 | 1_1:+69908700 | None:intergenic |
| CTTAGATGGTTAAGGTTGGT+AGG | 0.553528 | 1_1:+69908852 | None:intergenic |
| GAACGTGTATAGGTTGGTTG+TGG | 0.557227 | 1_1:+69908348 | None:intergenic |
| TTTGATCAAATATCTGGTGG+TGG | 0.559193 | 1_1:-69908094 | Msa0039920:CDS |
| TGAGAGAATCAATGGAAGGT+TGG | 0.560259 | 1_1:-69908173 | Msa0039920:CDS |
| GAAGGTATGTTGTTAACTCT+AGG | 0.563861 | 1_1:+69908677 | None:intergenic |
| TTGTTTGATCAAATATCTGG+TGG | 0.570609 | 1_1:-69908097 | Msa0039920:CDS |
| CTATAGAAATCTATTACACA+AGG | 0.595515 | 1_1:+69907885 | None:intergenic |
| TTATCAAGAGAATTCAATTG+GGG | 0.596726 | 1_1:-69907759 | Msa0039920:three_prime_UTR |
| TAGACTCCACACTAACACCT+TGG | 0.597870 | 1_1:+69908011 | None:intergenic |
| AACCTATACACGTTCACCAA+AGG | 0.599727 | 1_1:-69908340 | Msa0039920:intron |
| TGTCCTCAGATGCTGAGTTG+TGG | 0.599794 | 1_1:-69907973 | Msa0039920:CDS |
| ATTCCACAACTCAGCATCTG+AGG | 0.606044 | 1_1:+69907970 | None:intergenic |
| ACTCCATGAATGGGGATCTG+AGG | 0.610561 | 1_1:+69907612 | None:intergenic |
| TAAAATGGAATGCATTGTGA+GGG | 0.612817 | 1_1:+69908906 | None:intergenic |
| TTTGGTGAACGTGTATAGGT+TGG | 0.617927 | 1_1:+69908342 | None:intergenic |
| CTAAAATGGAATGCATTGTG+AGG | 0.619896 | 1_1:+69908905 | None:intergenic |
| TATCTGGTGGTGGAATTCCA+TGG | 0.624337 | 1_1:-69908084 | Msa0039920:CDS |
| ACACCTTAGATGGTTAAGGT+TGG | 0.627193 | 1_1:+69908848 | None:intergenic |
| AAGCTTGGCATATACACAGA+AGG | 0.629885 | 1_1:+69908659 | None:intergenic |
| AGGGCAGAAAGAGCAACCAA+AGG | 0.630670 | 1_1:-69908421 | Msa0039920:CDS |
| ACACTTGTCCCCAAGAACCA+TGG | 0.633615 | 1_1:+69908067 | None:intergenic |
| TCAGATGCTGAGTTGTGGAA+TGG | 0.641735 | 1_1:-69907968 | Msa0039920:CDS |
| ACTTGTCTTCAATTTCCACA+AGG | 0.644732 | 1_1:+69907728 | None:intergenic |
| GTGGAGATAGCAAATGGACA+GGG | 0.645295 | 1_1:-69908121 | Msa0039920:CDS |
| CACCTGAGAGAATCAATGGA+AGG | 0.646646 | 1_1:-69908177 | Msa0039920:CDS |
| AATTAGAAACTCCATGAATG+GGG | 0.655315 | 1_1:+69907604 | None:intergenic |
| GGATCTTGTTACACACTACG+TGG | 0.674942 | 1_1:-69908940 | None:intergenic |
| AATAGATTTCTATAGTGACA+AGG | 0.687882 | 1_1:-69907877 | Msa0039920:three_prime_UTR |
| TATAGAAATCTATTACACAA+GGG | 0.717921 | 1_1:+69907886 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATAATGATGAAAATA+TGG | - | chr1_1:69908156-69908175 | Msa0039920:CDS | 15.0% |
| !! | AAGTAATAATGATGAAAATA+TGG | - | chr1_1:69908156-69908175 | Msa0039920:CDS | 15.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | + | chr1_1:69907514-69907533 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | - | chr1_1:69907646-69907665 | Msa0039920:three_prime_UTR | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | - | chr1_1:69907957-69907976 | Msa0039920:CDS | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | + | chr1_1:69908519-69908538 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | - | chr1_1:69908547-69908566 | Msa0039920:intron | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | + | chr1_1:69908620-69908639 | None:intergenic | 20.0% |
| !! | TATTATCAAGAGAATTCAAT+TGG | - | chr1_1:69908641-69908660 | Msa0039920:CDS | 20.0% |
| !! | ATTATCAAGAGAATTCAATT+GGG | - | chr1_1:69908642-69908661 | Msa0039920:CDS | 20.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | + | chr1_1:69907514-69907533 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | - | chr1_1:69907646-69907665 | Msa0039920:three_prime_UTR | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | - | chr1_1:69907957-69907976 | Msa0039920:CDS | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | + | chr1_1:69908519-69908538 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | - | chr1_1:69908547-69908566 | Msa0039920:intron | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | + | chr1_1:69908620-69908639 | None:intergenic | 20.0% |
| !! | TATTATCAAGAGAATTCAAT+TGG | - | chr1_1:69908641-69908660 | Msa0039920:CDS | 20.0% |
| !! | ATTATCAAGAGAATTCAATT+GGG | - | chr1_1:69908642-69908661 | Msa0039920:CDS | 20.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | - | chr1_1:69907816-69907835 | Msa0039920:three_prime_UTR | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | - | chr1_1:69907961-69907980 | Msa0039920:CDS | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | - | chr1_1:69907962-69907981 | Msa0039920:CDS | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | - | chr1_1:69908488-69908507 | Msa0039920:intron | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | + | chr1_1:69908520-69908539 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+AGG | - | chr1_1:69908525-69908544 | Msa0039920:intron | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+GGG | - | chr1_1:69908643-69908662 | Msa0039920:CDS | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | - | chr1_1:69908749-69908768 | Msa0039920:exon | 25.0% |
| ! | TAATTAGAAACTCCATGAAT+GGG | + | chr1_1:69908802-69908821 | None:intergenic | 25.0% |
| ! | TTAATTAGAAACTCCATGAA+TGG | + | chr1_1:69908803-69908822 | None:intergenic | 25.0% |
| ! | ATGGAGTTTCTAATTAACAT+AGG | - | chr1_1:69908806-69908825 | Msa0039920:five_prime_UTR | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | + | chr1_1:69908894-69908913 | None:intergenic | 25.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | - | chr1_1:69907816-69907835 | Msa0039920:three_prime_UTR | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | - | chr1_1:69907961-69907980 | Msa0039920:CDS | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | - | chr1_1:69907962-69907981 | Msa0039920:CDS | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | - | chr1_1:69908488-69908507 | Msa0039920:intron | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | + | chr1_1:69908520-69908539 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+AGG | - | chr1_1:69908525-69908544 | Msa0039920:intron | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+GGG | - | chr1_1:69908643-69908662 | Msa0039920:CDS | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | - | chr1_1:69908749-69908768 | Msa0039920:exon | 25.0% |
| ! | TAATTAGAAACTCCATGAAT+GGG | + | chr1_1:69908802-69908821 | None:intergenic | 25.0% |
| ! | TTAATTAGAAACTCCATGAA+TGG | + | chr1_1:69908803-69908822 | None:intergenic | 25.0% |
| ! | ATGGAGTTTCTAATTAACAT+AGG | - | chr1_1:69908806-69908825 | Msa0039920:five_prime_UTR | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | + | chr1_1:69908894-69908913 | None:intergenic | 25.0% |
| TAAAATGGAATGCATTGTGA+GGG | + | chr1_1:69907499-69907518 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | + | chr1_1:69907618-69907637 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | - | chr1_1:69907872-69907891 | Msa0039920:three_prime_UTR | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | - | chr1_1:69908302-69908321 | Msa0039920:intron | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | - | chr1_1:69908305-69908324 | Msa0039920:intron | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | - | chr1_1:69908374-69908393 | Msa0039920:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | - | chr1_1:69908452-69908471 | Msa0039920:intron | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | - | chr1_1:69908487-69908506 | Msa0039920:intron | 30.0% |
| TTAGATGCAGTTGAAATAGA+AGG | - | chr1_1:69908721-69908740 | Msa0039920:CDS | 30.0% | |
| GAAGGTAAACATATGAAAAG+TGG | - | chr1_1:69908739-69908758 | Msa0039920:CDS | 30.0% | |
| AATTAGAAACTCCATGAATG+GGG | + | chr1_1:69908801-69908820 | None:intergenic | 30.0% | |
| TAAAATGGAATGCATTGTGA+GGG | + | chr1_1:69907499-69907518 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | + | chr1_1:69907618-69907637 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | - | chr1_1:69907872-69907891 | Msa0039920:three_prime_UTR | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | - | chr1_1:69908302-69908321 | Msa0039920:intron | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | - | chr1_1:69908305-69908324 | Msa0039920:intron | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | - | chr1_1:69908374-69908393 | Msa0039920:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | - | chr1_1:69908452-69908471 | Msa0039920:intron | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | - | chr1_1:69908487-69908506 | Msa0039920:intron | 30.0% |
| TTAGATGCAGTTGAAATAGA+AGG | - | chr1_1:69908721-69908740 | Msa0039920:CDS | 30.0% | |
| GAAGGTAAACATATGAAAAG+TGG | - | chr1_1:69908739-69908758 | Msa0039920:CDS | 30.0% | |
| AATTAGAAACTCCATGAATG+GGG | + | chr1_1:69908801-69908820 | None:intergenic | 30.0% | |
| ATGCATTGTGAGGGATATTA+TGG | + | chr1_1:69907490-69907509 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | + | chr1_1:69907500-69907519 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | + | chr1_1:69907614-69907633 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | + | chr1_1:69907623-69907642 | None:intergenic | 35.0% |
| ! | GAAGGTATGTTGTTAACTCT+AGG | + | chr1_1:69907728-69907747 | None:intergenic | 35.0% |
| TTTACTACTATGCTCACCTT+TGG | + | chr1_1:69908081-69908100 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | - | chr1_1:69908187-69908206 | Msa0039920:CDS | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | - | chr1_1:69908194-69908213 | Msa0039920:CDS | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | - | chr1_1:69908257-69908276 | Msa0039920:intron | 35.0% |
| TTTGATCAAATATCTGGTGG+TGG | - | chr1_1:69908308-69908327 | Msa0039920:intron | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | + | chr1_1:69908386-69908405 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | - | chr1_1:69908385-69908404 | Msa0039920:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | - | chr1_1:69908451-69908470 | Msa0039920:intron | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | - | chr1_1:69908466-69908485 | Msa0039920:intron | 35.0% | |
| ! | ATTGGGGAAATTTTTCCTTG+TGG | - | chr1_1:69908659-69908678 | Msa0039920:CDS | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | + | chr1_1:69908677-69908696 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | - | chr1_1:69908690-69908709 | Msa0039920:CDS | 35.0% |
| ATGCATTGTGAGGGATATTA+TGG | + | chr1_1:69907490-69907509 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | + | chr1_1:69907500-69907519 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | + | chr1_1:69907614-69907633 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | + | chr1_1:69907623-69907642 | None:intergenic | 35.0% |
| ! | GAAGGTATGTTGTTAACTCT+AGG | + | chr1_1:69907728-69907747 | None:intergenic | 35.0% |
| TTTACTACTATGCTCACCTT+TGG | + | chr1_1:69908081-69908100 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | - | chr1_1:69908187-69908206 | Msa0039920:CDS | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | - | chr1_1:69908194-69908213 | Msa0039920:CDS | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | - | chr1_1:69908257-69908276 | Msa0039920:intron | 35.0% |
| TTTGATCAAATATCTGGTGG+TGG | - | chr1_1:69908308-69908327 | Msa0039920:intron | 35.0% | |
| ACACTAACACCTTGGAAAAA+TGG | + | chr1_1:69908386-69908405 | None:intergenic | 35.0% | |
| !! | ATTTTTCCAAGGTGTTAGTG+TGG | - | chr1_1:69908385-69908404 | Msa0039920:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | - | chr1_1:69908451-69908470 | Msa0039920:intron | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | - | chr1_1:69908466-69908485 | Msa0039920:intron | 35.0% | |
| ! | ATTGGGGAAATTTTTCCTTG+TGG | - | chr1_1:69908659-69908678 | Msa0039920:CDS | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | + | chr1_1:69908677-69908696 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | - | chr1_1:69908690-69908709 | Msa0039920:CDS | 35.0% |
| ! | GGTAGGTATAGCATTGAAGA+TGG | + | chr1_1:69907536-69907555 | None:intergenic | 40.0% |
| ! | CTTAGATGGTTAAGGTTGGT+AGG | + | chr1_1:69907553-69907572 | None:intergenic | 40.0% |
| CTACCAACCTTAACCATCTA+AGG | - | chr1_1:69907551-69907570 | Msa0039920:three_prime_UTR | 40.0% | |
| ACACCTTAGATGGTTAAGGT+TGG | + | chr1_1:69907557-69907576 | None:intergenic | 40.0% | |
| CACTACACCTTAGATGGTTA+AGG | + | chr1_1:69907561-69907580 | None:intergenic | 40.0% | |
| TCACTTCACTACACCTTAGA+TGG | + | chr1_1:69907567-69907586 | None:intergenic | 40.0% | |
| !! | GGATGGCTTTGTAAAACACT+TGG | + | chr1_1:69907597-69907616 | None:intergenic | 40.0% |
| AAGCTTGGCATATACACAGA+AGG | + | chr1_1:69907746-69907765 | None:intergenic | 40.0% | |
| CAAGCATTTCTTCTCAAGCT+TGG | + | chr1_1:69907761-69907780 | None:intergenic | 40.0% | |
| GAAATGCTTGCCTCAAAGTT+CGG | - | chr1_1:69907771-69907790 | Msa0039920:three_prime_UTR | 40.0% | |
| TTTGGTGAACGTGTATAGGT+TGG | + | chr1_1:69908063-69908082 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | - | chr1_1:69908062-69908081 | Msa0039920:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | - | chr1_1:69908178-69908197 | Msa0039920:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | + | chr1_1:69908230-69908249 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | - | chr1_1:69908229-69908248 | Msa0039920:intron | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | - | chr1_1:69908239-69908258 | Msa0039920:intron | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | - | chr1_1:69908256-69908275 | Msa0039920:intron | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | - | chr1_1:69908258-69908277 | Msa0039920:intron | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | - | chr1_1:69908401-69908420 | Msa0039920:CDS | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | + | chr1_1:69908869-69908888 | None:intergenic | 40.0% | |
| ! | GGTAGGTATAGCATTGAAGA+TGG | + | chr1_1:69907536-69907555 | None:intergenic | 40.0% |
| ! | CTTAGATGGTTAAGGTTGGT+AGG | + | chr1_1:69907553-69907572 | None:intergenic | 40.0% |
| CTACCAACCTTAACCATCTA+AGG | - | chr1_1:69907551-69907570 | Msa0039920:three_prime_UTR | 40.0% | |
| ACACCTTAGATGGTTAAGGT+TGG | + | chr1_1:69907557-69907576 | None:intergenic | 40.0% | |
| CACTACACCTTAGATGGTTA+AGG | + | chr1_1:69907561-69907580 | None:intergenic | 40.0% | |
| TCACTTCACTACACCTTAGA+TGG | + | chr1_1:69907567-69907586 | None:intergenic | 40.0% | |
| !! | GGATGGCTTTGTAAAACACT+TGG | + | chr1_1:69907597-69907616 | None:intergenic | 40.0% |
| AAGCTTGGCATATACACAGA+AGG | + | chr1_1:69907746-69907765 | None:intergenic | 40.0% | |
| CAAGCATTTCTTCTCAAGCT+TGG | + | chr1_1:69907761-69907780 | None:intergenic | 40.0% | |
| GAAATGCTTGCCTCAAAGTT+CGG | - | chr1_1:69907771-69907790 | Msa0039920:three_prime_UTR | 40.0% | |
| TTTGGTGAACGTGTATAGGT+TGG | + | chr1_1:69908063-69908082 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | - | chr1_1:69908062-69908081 | Msa0039920:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | - | chr1_1:69908178-69908197 | Msa0039920:CDS | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | + | chr1_1:69908230-69908249 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | - | chr1_1:69908229-69908248 | Msa0039920:intron | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | - | chr1_1:69908239-69908258 | Msa0039920:intron | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | - | chr1_1:69908256-69908275 | Msa0039920:intron | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | - | chr1_1:69908258-69908277 | Msa0039920:intron | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | - | chr1_1:69908401-69908420 | Msa0039920:CDS | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | + | chr1_1:69908869-69908888 | None:intergenic | 40.0% | |
| CGAAAACATTACCTCAGCCA+TGG | + | chr1_1:69907798-69907817 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | + | chr1_1:69908017-69908036 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | + | chr1_1:69908051-69908070 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | + | chr1_1:69908057-69908076 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | + | chr1_1:69908067-69908086 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | - | chr1_1:69908197-69908216 | Msa0039920:CDS | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | - | chr1_1:69908198-69908217 | Msa0039920:CDS | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | - | chr1_1:69908225-69908244 | Msa0039920:intron | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | - | chr1_1:69908259-69908278 | Msa0039920:intron | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | - | chr1_1:69908281-69908300 | Msa0039920:intron | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | - | chr1_1:69908318-69908337 | Msa0039920:intron | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | - | chr1_1:69908325-69908344 | Msa0039920:intron | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | - | chr1_1:69908326-69908345 | Msa0039920:intron | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | - | chr1_1:69908327-69908346 | Msa0039920:intron | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | + | chr1_1:69908394-69908413 | None:intergenic | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | + | chr1_1:69908435-69908454 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | - | chr1_1:69908434-69908453 | Msa0039920:intron | 45.0% | |
| ATACCTCAGATCCCCATTCA+TGG | - | chr1_1:69908787-69908806 | Msa0039920:five_prime_UTR | 45.0% | |
| CGAAAACATTACCTCAGCCA+TGG | + | chr1_1:69907798-69907817 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | + | chr1_1:69908017-69908036 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | + | chr1_1:69908051-69908070 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | + | chr1_1:69908057-69908076 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | + | chr1_1:69908067-69908086 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | - | chr1_1:69908197-69908216 | Msa0039920:CDS | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | - | chr1_1:69908198-69908217 | Msa0039920:CDS | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | - | chr1_1:69908225-69908244 | Msa0039920:intron | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | - | chr1_1:69908259-69908278 | Msa0039920:intron | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | - | chr1_1:69908281-69908300 | Msa0039920:intron | 45.0% | |
| !! | TATCTGGTGGTGGAATTCCA+TGG | - | chr1_1:69908318-69908337 | Msa0039920:intron | 45.0% |
| TGGTGGAATTCCATGGTTCT+TGG | - | chr1_1:69908325-69908344 | Msa0039920:intron | 45.0% | |
| GGTGGAATTCCATGGTTCTT+GGG | - | chr1_1:69908326-69908345 | Msa0039920:intron | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | - | chr1_1:69908327-69908346 | Msa0039920:intron | 45.0% | |
| TAGACTCCACACTAACACCT+TGG | + | chr1_1:69908394-69908413 | None:intergenic | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | + | chr1_1:69908435-69908454 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | - | chr1_1:69908434-69908453 | Msa0039920:intron | 45.0% | |
| ATACCTCAGATCCCCATTCA+TGG | - | chr1_1:69908787-69908806 | Msa0039920:five_prime_UTR | 45.0% | |
| CCTGCTAGAAATGCTGGTCA+TGG | + | chr1_1:69907705-69907724 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | - | chr1_1:69907702-69907721 | Msa0039920:three_prime_UTR | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | + | chr1_1:69907711-69907730 | None:intergenic | 50.0% | |
| TTGCCTCAAAGTTCGGTCCA+TGG | - | chr1_1:69907778-69907797 | Msa0039920:three_prime_UTR | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | - | chr1_1:69907981-69908000 | Msa0039920:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | + | chr1_1:69908000-69908019 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | + | chr1_1:69908009-69908028 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | + | chr1_1:69908018-69908037 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | + | chr1_1:69908048-69908067 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | + | chr1_1:69908224-69908243 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | - | chr1_1:69908221-69908240 | Msa0039920:CDS | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | - | chr1_1:69908262-69908281 | Msa0039920:intron | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | - | chr1_1:69908275-69908294 | Msa0039920:intron | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | - | chr1_1:69908280-69908299 | Msa0039920:intron | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | + | chr1_1:69908338-69908357 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | - | chr1_1:69908429-69908448 | Msa0039920:intron | 50.0% | |
| ACTCCATGAATGGGGATCTG+AGG | + | chr1_1:69908793-69908812 | None:intergenic | 50.0% | |
| CCTGCTAGAAATGCTGGTCA+TGG | + | chr1_1:69907705-69907724 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | - | chr1_1:69907702-69907721 | Msa0039920:three_prime_UTR | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | + | chr1_1:69907711-69907730 | None:intergenic | 50.0% | |
| TTGCCTCAAAGTTCGGTCCA+TGG | - | chr1_1:69907778-69907797 | Msa0039920:three_prime_UTR | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | - | chr1_1:69907981-69908000 | Msa0039920:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | + | chr1_1:69908000-69908019 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | + | chr1_1:69908009-69908028 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | + | chr1_1:69908018-69908037 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | + | chr1_1:69908048-69908067 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | + | chr1_1:69908224-69908243 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | - | chr1_1:69908221-69908240 | Msa0039920:CDS | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | - | chr1_1:69908262-69908281 | Msa0039920:intron | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | - | chr1_1:69908275-69908294 | Msa0039920:intron | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | - | chr1_1:69908280-69908299 | Msa0039920:intron | 50.0% | |
| ACACTTGTCCCCAAGAACCA+TGG | + | chr1_1:69908338-69908357 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | - | chr1_1:69908429-69908448 | Msa0039920:intron | 50.0% | |
| ACTCCATGAATGGGGATCTG+AGG | + | chr1_1:69908793-69908812 | None:intergenic | 50.0% | |
| CAGCCATGGACCGAACTTTG+AGG | + | chr1_1:69907784-69907803 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | - | chr1_1:69907784-69907803 | Msa0039920:three_prime_UTR | 55.0% | |
| !! | TGTGGTTGTGGTGGTGGAGT+TGG | + | chr1_1:69908039-69908058 | None:intergenic | 55.0% |
| GTTGGTTGTGGTTGTGGTGG+TGG | + | chr1_1:69908045-69908064 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | + | chr1_1:69908860-69908879 | None:intergenic | 55.0% | |
| CAGCCATGGACCGAACTTTG+AGG | + | chr1_1:69907784-69907803 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | - | chr1_1:69907784-69907803 | Msa0039920:three_prime_UTR | 55.0% | |
| !! | TGTGGTTGTGGTGGTGGAGT+TGG | + | chr1_1:69908039-69908058 | None:intergenic | 55.0% |
| GTTGGTTGTGGTTGTGGTGG+TGG | + | chr1_1:69908045-69908064 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | + | chr1_1:69908860-69908879 | None:intergenic | 55.0% | |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | + | chr1_1:69908027-69908046 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | + | chr1_1:69908030-69908049 | None:intergenic | 60.0% |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | + | chr1_1:69908027-69908046 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | + | chr1_1:69908030-69908049 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 69907469 | 69908955 | 69907469 | ID=Msa0039920;Name=Msa0039920 |
| chr1_1 | mRNA | 69907469 | 69908955 | 69907469 | ID=Msa0039920-mRNA-1;Parent=Msa0039920;Name=Msa0039920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=196|1|1|1|1|1|3|429|196 |
| chr1_1 | exon | 69907469 | 69908242 | 69907469 | ID=Msa0039920-mRNA-1:exon:22973;Parent=Msa0039920-mRNA-1 |
| chr1_1 | exon | 69908341 | 69908445 | 69908341 | ID=Msa0039920-mRNA-1:exon:22972;Parent=Msa0039920-mRNA-1 |
| chr1_1 | exon | 69908619 | 69908955 | 69908619 | ID=Msa0039920-mRNA-1:exon:22971;Parent=Msa0039920-mRNA-1 |
| chr1_1 | five_prime_UTR | 69908760 | 69908955 | 69908760 | ID=Msa0039920-mRNA-1:five_prime_utr;Parent=Msa0039920-mRNA-1 |
| chr1_1 | CDS | 69908619 | 69908759 | 69908619 | ID=Msa0039920-mRNA-1:cds;Parent=Msa0039920-mRNA-1 |
| chr1_1 | CDS | 69908341 | 69908445 | 69908341 | ID=Msa0039920-mRNA-1:cds;Parent=Msa0039920-mRNA-1 |
| chr1_1 | CDS | 69907898 | 69908242 | 69907898 | ID=Msa0039920-mRNA-1:cds;Parent=Msa0039920-mRNA-1 |
| chr1_1 | three_prime_UTR | 69907469 | 69907897 | 69907469 | ID=Msa0039920-mRNA-1:three_prime_utr;Parent=Msa0039920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
