Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348760 | XP_003598421.1 | 86.940 | 268 | 28 | 3 | 1 | 262 | 1 | 267 | 2.21e-147 | 423 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348760 | sp|Q9FL44|MPH1_ARATH | 64.000 | 200 | 59 | 4 | 27 | 213 | 26 | 225 | 4.05e-79 | 241 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348760 | G7IVT9 | 86.940 | 268 | 28 | 3 | 1 | 262 | 1 | 267 | 1.06e-147 | 423 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0348760 | 0.814925 | 1.201882e-51 | -8.615850e-47 |
| Msa0001510 | Msa0348760 | 0.804020 | 2.639469e-49 | -8.615850e-47 |
| Msa0002060 | Msa0348760 | 0.816846 | 4.480029e-52 | -8.615850e-47 |
| Msa0016110 | Msa0348760 | 0.823475 | 1.358137e-53 | -8.615850e-47 |
| Msa0016160 | Msa0348760 | 0.822354 | 2.477693e-53 | -8.615850e-47 |
| Msa0017130 | Msa0348760 | 0.808036 | 3.772532e-50 | -8.615850e-47 |
| Msa0018010 | Msa0348760 | 0.831117 | 2.001456e-55 | -8.615850e-47 |
| Msa0021710 | Msa0348760 | 0.861089 | 1.310862e-63 | -8.615850e-47 |
| Msa0025340 | Msa0348760 | 0.818085 | 2.355483e-52 | -8.615850e-47 |
| Msa0033590 | Msa0348760 | 0.819724 | 9.993581e-53 | -8.615850e-47 |
| Msa0034320 | Msa0348760 | 0.826588 | 2.497696e-54 | -8.615850e-47 |
| Msa0037300 | Msa0348760 | 0.816854 | 4.461549e-52 | -8.615850e-47 |
| Msa0039020 | Msa0348760 | 0.812199 | 4.779707e-51 | -8.615850e-47 |
| Msa0040120 | Msa0348760 | 0.801181 | 1.016355e-48 | -8.615850e-47 |
| Msa0046090 | Msa0348760 | 0.802019 | 6.843319e-49 | -8.615850e-47 |
| Msa0046700 | Msa0348760 | 0.820415 | 6.941222e-53 | -8.615850e-47 |
| Msa0046800 | Msa0348760 | 0.812526 | 4.054917e-51 | -8.615850e-47 |
| Msa0053210 | Msa0348760 | 0.833593 | 4.878570e-56 | -8.615850e-47 |
| Msa0058140 | Msa0348760 | 0.816647 | 4.964708e-52 | -8.615850e-47 |
| Msa0058970 | Msa0348760 | 0.807296 | 5.416526e-50 | -8.615850e-47 |
| Msa0069590 | Msa0348760 | 0.806890 | 6.601460e-50 | -8.615850e-47 |
| Msa0070580 | Msa0348760 | 0.811181 | 7.959490e-51 | -8.615850e-47 |
| Msa0075080 | Msa0348760 | 0.800865 | 1.179421e-48 | -8.615850e-47 |
| Msa0076990 | Msa0348760 | 0.801207 | 1.003798e-48 | -8.615850e-47 |
| Msa0077990 | Msa0348760 | 0.813208 | 2.875184e-51 | -8.615850e-47 |
| Msa0081300 | Msa0348760 | 0.814511 | 1.484614e-51 | -8.615850e-47 |
| Msa0087130 | Msa0348760 | 0.803239 | 3.832945e-49 | -8.615850e-47 |
| Msa0087580 | Msa0348760 | 0.809226 | 2.101257e-50 | -8.615850e-47 |
| Msa0093830 | Msa0348760 | 0.800187 | 1.621190e-48 | -8.615850e-47 |
| Msa0096830 | Msa0348760 | 0.812065 | 5.114195e-51 | -8.615850e-47 |
| Msa0102290 | Msa0348760 | 0.803698 | 3.079222e-49 | -8.615850e-47 |
| Msa0109870 | Msa0348760 | 0.816430 | 5.551819e-52 | -8.615850e-47 |
| Msa0123900 | Msa0348760 | 0.846057 | 2.759020e-59 | -8.615850e-47 |
| Msa0124460 | Msa0348760 | 0.829471 | 5.054613e-55 | -8.615850e-47 |
| Msa0127110 | Msa0348760 | 0.815295 | 9.946015e-52 | -8.615850e-47 |
| Msa0130120 | Msa0348760 | 0.805052 | 1.608330e-49 | -8.615850e-47 |
| Msa0133450 | Msa0348760 | 0.821664 | 3.580374e-53 | -8.615850e-47 |
| Msa0134300 | Msa0348760 | 0.810545 | 1.092652e-50 | -8.615850e-47 |
| Msa0147070 | Msa0348760 | 0.804305 | 2.302945e-49 | -8.615850e-47 |
| Msa0149070 | Msa0348760 | 0.804004 | 2.659670e-49 | -8.615850e-47 |
| Msa0153640 | Msa0348760 | 0.804916 | 1.716586e-49 | -8.615850e-47 |
| Msa0155550 | Msa0348760 | 0.818899 | 1.540573e-52 | -8.615850e-47 |
| Msa0156260 | Msa0348760 | 0.815631 | 8.375751e-52 | -8.615850e-47 |
| Msa0160120 | Msa0348760 | 0.840687 | 7.484644e-58 | -8.615850e-47 |
| Msa0160470 | Msa0348760 | 0.812789 | 3.552747e-51 | -8.615850e-47 |
| Msa0168470 | Msa0348760 | 0.829385 | 5.303446e-55 | -8.615850e-47 |
| Msa0168950 | Msa0348760 | 0.801943 | 7.092093e-49 | -8.615850e-47 |
| Msa0173610 | Msa0348760 | 0.817636 | 2.976173e-52 | -8.615850e-47 |
| Msa0178020 | Msa0348760 | 0.816882 | 4.398115e-52 | -8.615850e-47 |
| Msa0180780 | Msa0348760 | 0.801150 | 1.031185e-48 | -8.615850e-47 |
| Msa0185770 | Msa0348760 | 0.803861 | 2.847594e-49 | -8.615850e-47 |
| Msa0186750 | Msa0348760 | 0.821418 | 4.080448e-53 | -8.615850e-47 |
| Msa0188670 | Msa0348760 | 0.806569 | 7.717654e-50 | -8.615850e-47 |
| Msa0191180 | Msa0348760 | 0.852154 | 5.559087e-61 | -8.615850e-47 |
| Msa0195670 | Msa0348760 | 0.833163 | 6.244757e-56 | -8.615850e-47 |
| Msa0198280 | Msa0348760 | 0.809901 | 1.504875e-50 | -8.615850e-47 |
| Msa0202630 | Msa0348760 | 0.823592 | 1.274575e-53 | -8.615850e-47 |
| Msa0216900 | Msa0348760 | 0.802908 | 4.487818e-49 | -8.615850e-47 |
| Msa0220050 | Msa0348760 | 0.870940 | 9.979011e-67 | -8.615850e-47 |
| Msa0243160 | Msa0348760 | 0.818422 | 1.976871e-52 | -8.615850e-47 |
| Msa0244320 | Msa0348760 | 0.830249 | 3.266341e-55 | -8.615850e-47 |
| Msa0266100 | Msa0348760 | 0.839322 | 1.698283e-57 | -8.615850e-47 |
| Msa0288350 | Msa0348760 | 0.818538 | 1.860375e-52 | -8.615850e-47 |
| Msa0288360 | Msa0348760 | 0.801368 | 9.307769e-49 | -8.615850e-47 |
| Msa0292300 | Msa0348760 | 0.808379 | 3.187754e-50 | -8.615850e-47 |
| Msa0297860 | Msa0348760 | 0.823948 | 1.051851e-53 | -8.615850e-47 |
| Msa0304020 | Msa0348760 | 0.802209 | 6.254274e-49 | -8.615850e-47 |
| Msa0304870 | Msa0348760 | 0.801842 | 7.439163e-49 | -8.615850e-47 |
| Msa0311910 | Msa0348760 | 0.811540 | 6.651594e-51 | -8.615850e-47 |
| Msa0313550 | Msa0348760 | 0.859022 | 5.513526e-63 | -8.615850e-47 |
| Msa0330370 | Msa0348760 | 0.815259 | 1.013249e-51 | -8.615850e-47 |
| Msa0334780 | Msa0348760 | 0.811965 | 5.376251e-51 | -8.615850e-47 |
| Msa0335860 | Msa0348760 | 0.817213 | 3.705181e-52 | -8.615850e-47 |
| Msa0341260 | Msa0348760 | 0.801122 | 1.045120e-48 | -8.615850e-47 |
| Msa0348760 | Msa0355590 | 0.822217 | 2.665166e-53 | -8.615850e-47 |
| Msa0348760 | Msa0367310 | 0.810830 | 9.484942e-51 | -8.615850e-47 |
| Msa0348760 | Msa0369430 | 0.831476 | 1.634139e-55 | -8.615850e-47 |
| Msa0348760 | Msa0371050 | 0.817828 | 2.692640e-52 | -8.615850e-47 |
| Msa0348760 | Msa0372550 | 0.817442 | 3.290933e-52 | -8.615850e-47 |
| Msa0348760 | Msa0377460 | 0.827493 | 1.517779e-54 | -8.615850e-47 |
| Msa0348760 | Msa0393540 | 0.814393 | 1.575952e-51 | -8.615850e-47 |
| Msa0348760 | Msa0395780 | 0.810218 | 1.285725e-50 | -8.615850e-47 |
| Msa0348760 | Msa0399180 | 0.819140 | 1.357805e-52 | -8.615850e-47 |
| Msa0348760 | Msa0403670 | 0.816258 | 6.067832e-52 | -8.615850e-47 |
| Msa0348760 | Msa0405040 | 0.814711 | 1.340509e-51 | -8.615850e-47 |
| Msa0348760 | Msa0425080 | 0.823680 | 1.215675e-53 | -8.615850e-47 |
| Msa0348760 | Msa0425150 | 0.823857 | 1.105278e-53 | -8.615850e-47 |
| Msa0348760 | Msa0426860 | 0.829937 | 3.892879e-55 | -8.615850e-47 |
| Msa0348760 | Msa0426890 | 0.828382 | 9.272526e-55 | -8.615850e-47 |
| Msa0348760 | Msa0438990 | 0.862755 | 4.047666e-64 | -8.615850e-47 |
| Msa0348760 | Msa0439090 | 0.800068 | 1.714125e-48 | -8.615850e-47 |
| Msa0348760 | Msa0440720 | 0.822753 | 2.001135e-53 | -8.615850e-47 |
| Msa0348760 | Msa0443250 | 0.870710 | 1.187639e-66 | -8.615850e-47 |
| Msa0348760 | Msa0449030 | 0.817737 | 2.823721e-52 | -8.615850e-47 |
| Msa0348760 | Msa0462120 | 0.809275 | 2.050848e-50 | -8.615850e-47 |
| Msa0348760 | Msa0474640 | 0.807416 | 5.108274e-50 | -8.615850e-47 |
| Msa0348760 | Msa0488830 | 0.801577 | 8.430550e-49 | -8.615850e-47 |
| Msa0348760 | Msa0497060 | 0.804385 | 2.216309e-49 | -8.615850e-47 |
| Msa0348760 | Msa0504740 | 0.834295 | 3.254635e-56 | -8.615850e-47 |
| Msa0348760 | Msa0508620 | 0.803274 | 3.769046e-49 | -8.615850e-47 |
| Msa0348760 | Msa0508660 | 0.803044 | 4.206519e-49 | -8.615850e-47 |
| Msa0348760 | Msa0513660 | 0.804897 | 1.732877e-49 | -8.615850e-47 |
| Msa0348760 | Msa0515830 | 0.809542 | 1.797145e-50 | -8.615850e-47 |
| Msa0348760 | Msa0516480 | 0.803437 | 3.487987e-49 | -8.615850e-47 |
| Msa0348760 | Msa0517400 | 0.823566 | 1.293137e-53 | -8.615850e-47 |
| Msa0348760 | Msa0519090 | 0.800939 | 1.139129e-48 | -8.615850e-47 |
| Msa0348760 | Msa0520450 | 0.807883 | 4.066837e-50 | -8.615850e-47 |
| Msa0348760 | Msa0530250 | 0.834337 | 3.177879e-56 | -8.615850e-47 |
| Msa0348760 | Msa0550720 | 0.817278 | 3.581875e-52 | -8.615850e-47 |
| Msa0348760 | Msa0553230 | 0.801928 | 7.141998e-49 | -8.615850e-47 |
| Msa0348760 | Msa0555210 | 0.828201 | 1.025412e-54 | -8.615850e-47 |
| Msa0348760 | Msa0574450 | 0.805149 | 1.534355e-49 | -8.615850e-47 |
| Msa0348760 | Msa0580360 | 0.804837 | 1.782945e-49 | -8.615850e-47 |
| Msa0348760 | Msa0583810 | 0.806936 | 6.457309e-50 | -8.615850e-47 |
| Msa0348760 | Msa0623350 | 0.812432 | 4.251347e-51 | -8.615850e-47 |
| Msa0348760 | Msa0624220 | 0.816231 | 6.150866e-52 | -8.615850e-47 |
| Msa0348760 | Msa0624240 | 0.826103 | 3.260005e-54 | -8.615850e-47 |
| Msa0348760 | Msa0638040 | 0.800053 | 1.725888e-48 | -8.615850e-47 |
| Msa0348760 | Msa0647110 | 0.820753 | 5.806031e-53 | -8.615850e-47 |
| Msa0348760 | Msa0647460 | 0.828508 | 8.647738e-55 | -8.615850e-47 |
| Msa0348760 | Msa0648630 | 0.809431 | 1.898755e-50 | -8.615850e-47 |
| Msa0348760 | Msa0649140 | 0.807972 | 3.892630e-50 | -8.615850e-47 |
| Msa0348760 | Msa0681100 | 0.800119 | 1.673958e-48 | -8.615850e-47 |
| Msa0348760 | Msa0685520 | 0.811217 | 7.818480e-51 | -8.615850e-47 |
| Msa0348760 | Msa0687540 | 0.815020 | 1.144695e-51 | -8.615850e-47 |
| Msa0348760 | Msa0687650 | 0.803357 | 3.622525e-49 | -8.615850e-47 |
| Msa0348760 | Msa0689980 | 0.807145 | 5.830786e-50 | -8.615850e-47 |
| Msa0348760 | Msa0691100 | 0.807194 | 5.693801e-50 | -8.615850e-47 |
| Msa0348760 | Msa0694910 | 0.826052 | 3.352015e-54 | -8.615850e-47 |
| Msa0348760 | Msa0697420 | 0.802123 | 6.513303e-49 | -8.615850e-47 |
| Msa0348760 | Msa0704570 | 0.801208 | 1.003336e-48 | -8.615850e-47 |
| Msa0348760 | Msa0705670 | 0.830750 | 2.463124e-55 | -8.615850e-47 |
| Msa0348760 | Msa0711510 | 0.816338 | 5.821477e-52 | -8.615850e-47 |
| Msa0348760 | Msa0712670 | 0.802964 | 4.369842e-49 | -8.615850e-47 |
| Msa0348760 | Msa0715180 | 0.816299 | 5.939734e-52 | -8.615850e-47 |
| Msa0348760 | Msa0720850 | 0.814030 | 1.896293e-51 | -8.615850e-47 |
| Msa0348760 | Msa0745270 | 0.826185 | 3.115665e-54 | -8.615850e-47 |
| Msa0348760 | Msa0751640 | 0.824034 | 1.004279e-53 | -8.615850e-47 |
| Msa0348760 | Msa0753040 | 0.807804 | 4.227250e-50 | -8.615850e-47 |
| Msa0348760 | Msa0754790 | 0.827042 | 1.945895e-54 | -8.615850e-47 |
| Msa0348760 | Msa0755570 | 0.822936 | 1.814267e-53 | -8.615850e-47 |
| Msa0348760 | Msa0766950 | 0.839739 | 1.322941e-57 | -8.615850e-47 |
| Msa0348760 | Msa0767040 | 0.820035 | 8.486253e-53 | -8.615850e-47 |
| Msa0348760 | Msa0786330 | 0.846594 | 1.969754e-59 | -8.615850e-47 |
| Msa0348760 | Msa0794300 | 0.811907 | 5.534785e-51 | -8.615850e-47 |
| Msa0348760 | Msa0807840 | 0.823268 | 1.517438e-53 | -8.615850e-47 |
| Msa0348760 | Msa0822800 | 0.858445 | 8.200448e-63 | -8.615850e-47 |
| Msa0348760 | Msa0825960 | 0.838596 | 2.617499e-57 | -8.615850e-47 |
| Msa0348760 | Msa0828810 | 0.817053 | 4.026223e-52 | -8.615850e-47 |
| Msa0348760 | Msa0831710 | 0.820316 | 7.315681e-53 | -8.615850e-47 |
| Msa0348760 | Msa0835030 | 0.820863 | 5.479248e-53 | -8.615850e-47 |
| Msa0348760 | Msa0836200 | 0.804994 | 1.653838e-49 | -8.615850e-47 |
| Msa0348760 | Msa0841350 | 0.803389 | 3.568026e-49 | -8.615850e-47 |
| Msa0348760 | Msa0841980 | 0.821793 | 3.341787e-53 | -8.615850e-47 |
| Msa0348760 | Msa0854190 | 0.820658 | 6.105512e-53 | -8.615850e-47 |
| Msa0348760 | Msa0906150 | 0.804991 | 1.656166e-49 | -8.615850e-47 |
| Msa0348760 | Msa0940550 | 0.822223 | 2.657461e-53 | -8.615850e-47 |
| Msa0348760 | Msa0959970 | 0.816851 | 4.467659e-52 | -8.615850e-47 |
| Msa0348760 | Msa0967940 | 0.827014 | 1.976941e-54 | -8.615850e-47 |
| Msa0348760 | Msa0977090 | 0.826204 | 3.083583e-54 | -8.615850e-47 |
| Msa0348760 | Msa0978540 | 0.809728 | 1.639147e-50 | -8.615850e-47 |
| Msa0348760 | Msa0995130 | 0.810677 | 1.023575e-50 | -8.615850e-47 |
| Msa0348760 | Msa1002980 | 0.816516 | 5.312298e-52 | -8.615850e-47 |
| Msa0348760 | Msa1033120 | 0.827754 | 1.314033e-54 | -8.615850e-47 |
| Msa0348760 | Msa1045750 | 0.801792 | 7.618042e-49 | -8.615850e-47 |
| Msa0348760 | Msa1047390 | 0.803307 | 3.710106e-49 | -8.615850e-47 |
| Msa0348760 | Msa1066930 | 0.820508 | 6.608229e-53 | -8.615850e-47 |
| Msa0348760 | Msa1070710 | 0.815394 | 9.457609e-52 | -8.615850e-47 |
| Msa0348760 | Msa1070930 | 0.804913 | 1.719108e-49 | -8.615850e-47 |
| Msa0348760 | Msa1075120 | 0.823124 | 1.640319e-53 | -8.615850e-47 |
| Msa0348760 | Msa1076070 | 0.814506 | 1.488429e-51 | -8.615850e-47 |
| Msa0348760 | Msa1121580 | 0.868804 | 4.971612e-66 | -8.615850e-47 |
| Msa0348760 | Msa1127530 | 0.817939 | 2.542405e-52 | -8.615850e-47 |
| Msa0348760 | Msa1131300 | 0.801862 | 7.368608e-49 | -8.615850e-47 |
| Msa0348760 | Msa1132540 | 0.808963 | 2.391949e-50 | -8.615850e-47 |
| Msa0348760 | Msa1134800 | 0.805358 | 1.387561e-49 | -8.615850e-47 |
| Msa0348760 | Msa1137800 | 0.826512 | 2.604619e-54 | -8.615850e-47 |
| Msa0348760 | Msa1148100 | 0.814521 | 1.476819e-51 | -8.615850e-47 |
| Msa0348760 | Msa1156270 | 0.827316 | 1.673226e-54 | -8.615850e-47 |
| Msa0348760 | Msa1165330 | 0.801093 | 1.059348e-48 | -8.615850e-47 |
| Msa0348760 | Msa1171640 | 0.817675 | 2.916438e-52 | -8.615850e-47 |
| Msa0348760 | Msa1173410 | 0.814725 | 1.331102e-51 | -8.615850e-47 |
| Msa0348760 | Msa1175740 | 0.809456 | 1.875000e-50 | -8.615850e-47 |
| Msa0348760 | Msa1176830 | 0.802200 | 6.280481e-49 | -8.615850e-47 |
| Msa0348760 | Msa1177300 | 0.811498 | 6.794351e-51 | -8.615850e-47 |
| Msa0348760 | Msa1189630 | 0.834935 | 2.247857e-56 | -8.615850e-47 |
| Msa0348760 | Msa1196910 | 0.826876 | 2.132097e-54 | -8.615850e-47 |
| Msa0348760 | Msa1197210 | 0.812806 | 3.522300e-51 | -8.615850e-47 |
| Msa0348760 | Msa1206500 | 0.811325 | 7.406613e-51 | -8.615850e-47 |
| Msa0348760 | Msa1208630 | 0.804986 | 1.660167e-49 | -8.615850e-47 |
| Msa0348760 | Msa1214080 | 0.840970 | 6.307952e-58 | -8.615850e-47 |
| Msa0348760 | Msa1215790 | 0.813695 | 2.247582e-51 | -8.615850e-47 |
| Msa0348760 | Msa1222900 | 0.820902 | 5.367139e-53 | -8.615850e-47 |
| Msa0348760 | Msa1224140 | 0.815128 | 1.083598e-51 | -8.615850e-47 |
| Msa0348760 | Msa1235050 | 0.825332 | 4.966366e-54 | -8.615850e-47 |
| Msa0348760 | Msa1235880 | 0.808596 | 2.864978e-50 | -8.615850e-47 |
| Msa0348760 | Msa1236090 | 0.806133 | 9.536210e-50 | -8.615850e-47 |
| Msa0348760 | Msa1244380 | 0.813438 | 2.560122e-51 | -8.615850e-47 |
| Msa0348760 | Msa1244770 | 0.807814 | 4.206359e-50 | -8.615850e-47 |
| Msa0348760 | Msa1249740 | 0.831355 | 1.749827e-55 | -8.615850e-47 |
| Msa0348760 | Msa1252040 | 0.810006 | 1.428093e-50 | -8.615850e-47 |
| Msa0348760 | Msa1252730 | 0.805578 | 1.247578e-49 | -8.615850e-47 |
| Msa0348760 | Msa1264670 | 0.819368 | 1.205174e-52 | -8.615850e-47 |
| Msa0348760 | Msa1296930 | 0.821446 | 4.020929e-53 | -8.615850e-47 |
| Msa0348760 | Msa1298180 | 0.823402 | 1.412328e-53 | -8.615850e-47 |
| Msa0348760 | Msa1300880 | 0.818245 | 2.167200e-52 | -8.615850e-47 |
| Msa0348760 | Msa1307380 | 0.811157 | 8.056530e-51 | -8.615850e-47 |
| Msa0348760 | Msa1325270 | 0.822941 | 1.808742e-53 | -8.615850e-47 |
| Msa0348760 | Msa1330080 | 0.801623 | 8.250885e-49 | -8.615850e-47 |
| Msa0348760 | Msa1331900 | 0.836750 | 7.793327e-57 | -8.615850e-47 |
| Msa0348760 | Msa1334690 | 0.814295 | 1.656657e-51 | -8.615850e-47 |
| Msa0348760 | Msa1335210 | 0.805012 | 1.639038e-49 | -8.615850e-47 |
| Msa0348760 | Msa1339250 | 0.835221 | 1.903279e-56 | -8.615850e-47 |
| Msa0348760 | Msa1345120 | 0.810809 | 9.585289e-51 | -8.615850e-47 |
| Msa0348760 | Msa1349640 | 0.806445 | 8.198242e-50 | -8.615850e-47 |
| Msa0348760 | Msa1349720 | 0.816057 | 6.730030e-52 | -8.615850e-47 |
| Msa0348760 | Msa1364850 | 0.801167 | 1.023078e-48 | -8.615850e-47 |
| Msa0348760 | Msa1369390 | 0.800907 | 1.156479e-48 | -8.615850e-47 |
| Msa0348760 | Msa1373570 | 0.808054 | 3.738561e-50 | -8.615850e-47 |
| Msa0348760 | Msa1375120 | 0.814472 | 1.514293e-51 | -8.615850e-47 |
| Msa0348760 | Msa1375570 | 0.807577 | 4.722905e-50 | -8.615850e-47 |
| Msa0348760 | Msa1376510 | 0.809266 | 2.059722e-50 | -8.615850e-47 |
| Msa0348760 | Msa1411390 | 0.815805 | 7.659323e-52 | -8.615850e-47 |
| Msa0348760 | Msa1416460 | 0.823329 | 1.468948e-53 | -8.615850e-47 |
| Msa0348760 | Msa1420130 | 0.820324 | 7.286554e-53 | -8.615850e-47 |
| Msa0348760 | Msa1423270 | 0.802086 | 6.629964e-49 | -8.615850e-47 |
| Msa0348760 | Msa1427020 | 0.814276 | 1.672959e-51 | -8.615850e-47 |
| Msa0348760 | Msa1435690 | 0.805203 | 1.495424e-49 | -8.615850e-47 |
| Msa0348760 | Msa1439400 | 0.813260 | 2.800765e-51 | -8.615850e-47 |
| Msa0348760 | Msa1439800 | 0.802043 | 6.764510e-49 | -8.615850e-47 |
| Msa0348760 | Msa1439880 | 0.818241 | 2.172442e-52 | -8.615850e-47 |
| Msa0348760 | Msa1444750 | 0.819534 | 1.104059e-52 | -8.615850e-47 |
| Msa0348760 | Msa1449680 | 0.827003 | 1.988699e-54 | -8.615850e-47 |
| Msa0348760 | Msa1453130 | 0.801403 | 9.152105e-49 | -8.615850e-47 |
| Msa0348760 | Msa1462700 | 0.810519 | 1.107033e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348760 | MtrunA17_Chr3g0081651 | 86.940 | 268 | 28 | 3 | 1 | 262 | 1 | 267 | 2.03e-151 | 423 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348760 | AT5G07020.1 | 64.000 | 200 | 59 | 4 | 27 | 213 | 26 | 225 | 4.12e-80 | 241 |
Find 86 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAACTAACTTCCTTATC+AGG | 0.183830 | 3_1:-11582382 | None:intergenic |
| AGATTCCAATTATAGGATTT+TGG | 0.200860 | 3_1:-11582116 | None:intergenic |
| TGATGGAGAAAGAAGGTTTA+TGG | 0.216940 | 3_1:-11582084 | None:intergenic |
| AAATATAAACACACTTAATT+TGG | 0.234280 | 3_1:-11584767 | None:intergenic |
| AATCATTCATTTACCAATAA+TGG | 0.236858 | 3_1:+11582207 | Msa0348760:exon |
| TTGACACAATATTACAAATA+TGG | 0.241922 | 3_1:-11584881 | None:intergenic |
| CCAAACCAAAATCCTATAAT+TGG | 0.249655 | 3_1:+11582111 | Msa0348760:five_prime_UTR |
| TGTAATGCACAAGCCATTAT+TGG | 0.259258 | 3_1:-11582220 | None:intergenic |
| GCTTATGTATACAAGGTTAA+TGG | 0.352128 | 3_1:+11584726 | Msa0348760:three_prime_UTR |
| GGCACATGTGTTGGTTGTTA+TGG | 0.357906 | 3_1:-11582248 | None:intergenic |
| CAGCCGGTTGAATTGTGAAT+TGG | 0.366130 | 3_1:+11584956 | Msa0348760:three_prime_UTR |
| CACATTACAAATGTTTGAAC+TGG | 0.371702 | 3_1:+11585007 | Msa0348760:three_prime_UTR |
| GTAGGTTGGGAAGGTGAGTA+TGG | 0.374281 | 3_1:+11583229 | Msa0348760:intron |
| TGTTTGAACTGGAATTGAAT+TGG | 0.383732 | 3_1:+11585018 | Msa0348760:three_prime_UTR |
| GTTTGAACTGGAATTGAATT+GGG | 0.405235 | 3_1:+11585019 | Msa0348760:three_prime_UTR |
| TAGAACCGTCTCGGTGCTCT+CGG | 0.407955 | 3_1:-11584492 | None:intergenic |
| GATTAAACCAACTGACGAAC+GGG | 0.425048 | 3_1:-11584979 | None:intergenic |
| TGTACCGGTCTCCGTGCTCT+CGG | 0.432389 | 3_1:-11584531 | None:intergenic |
| TCTGTCTCGGCTGTCACGGC+AGG | 0.436222 | 3_1:-11584407 | None:intergenic |
| AAAAGTAATGTTTCAAAAGC+CGG | 0.441122 | 3_1:+11584918 | Msa0348760:three_prime_UTR |
| TCAAACATTTGTAATGTGAC+TGG | 0.445052 | 3_1:-11585002 | None:intergenic |
| GCAGAAAGTGCTATAAGTTC+AGG | 0.456072 | 3_1:+11584182 | Msa0348760:CDS |
| GCTATAAGTTCAGGAACATC+TGG | 0.456974 | 3_1:+11584191 | Msa0348760:CDS |
| CAGAACACAGCAGCAATTGC+TGG | 0.464297 | 3_1:+11584233 | Msa0348760:CDS |
| ATGTCCACACTTGAGGTCTC+TGG | 0.465993 | 3_1:-11584623 | None:intergenic |
| GAATTAAGATGGGTGGTTTG+TGG | 0.475695 | 3_1:-11582045 | None:intergenic |
| GGAAGAATGTGCCCCTGATA+AGG | 0.476565 | 3_1:+11582369 | Msa0348760:CDS |
| TGGTAAGAATTCTCCTCCTC+AGG | 0.480874 | 3_1:+11584307 | Msa0348760:CDS |
| TGAACTTGAGGAACTTCTGC+AGG | 0.483064 | 3_1:-11584581 | None:intergenic |
| GAATTGGCCCGTTCGTCAGT+TGG | 0.484828 | 3_1:+11584972 | Msa0348760:three_prime_UTR |
| CGTCGTAAGCAGGGTTGGAC+AGG | 0.487965 | 3_1:+11583299 | Msa0348760:CDS |
| ATATCCACCACGTCGTAAGC+AGG | 0.491350 | 3_1:+11583289 | Msa0348760:CDS |
| GGGCCAATTCACAATTCAAC+CGG | 0.493650 | 3_1:-11584959 | None:intergenic |
| GTACCGGTCTCCGTGCTCTC+GGG | 0.504561 | 3_1:-11584530 | None:intergenic |
| TTGGACAGGCTATGTTGAAA+AGG | 0.509725 | 3_1:+11583313 | Msa0348760:CDS |
| GGATTAAACCAACTGACGAA+CGG | 0.511165 | 3_1:-11584980 | None:intergenic |
| TTTCCAGCCAGCAGTTTATG+TGG | 0.517990 | 3_1:+11584160 | Msa0348760:intron |
| CAAACATTTGTAATGTGACT+GGG | 0.518652 | 3_1:-11585001 | None:intergenic |
| ACATCTGGTTCTTCTTCTGA+TGG | 0.519250 | 3_1:+11584206 | Msa0348760:CDS |
| GAGGAGAAGACAAAAGTAGT+AGG | 0.520284 | 3_1:+11583263 | Msa0348760:CDS |
| GTGTGTGTTAAGAATTAAGA+TGG | 0.524927 | 3_1:-11582056 | None:intergenic |
| TATTGTGTCAAGGATTTCAA+AGG | 0.528508 | 3_1:+11584893 | Msa0348760:three_prime_UTR |
| GCTGAACTGCCTACTCGATC+CGG | 0.532746 | 3_1:-11584937 | None:intergenic |
| AGTACCGTCTCAGTGCTCTC+AGG | 0.533255 | 3_1:-11584452 | None:intergenic |
| TGAGATTCAACTTGAACTTG+AGG | 0.536784 | 3_1:-11584593 | None:intergenic |
| AGAACCGTCTCGGTGCTCTC+GGG | 0.539464 | 3_1:-11584491 | None:intergenic |
| GTAGTAACTAAGTGATGGCC+CGG | 0.545619 | 3_1:-11584348 | None:intergenic |
| CACCACGTCGTAAGCAGGGT+TGG | 0.545868 | 3_1:+11583294 | Msa0348760:CDS |
| ATGAACTAACTTCCTTATCA+GGG | 0.546204 | 3_1:-11582381 | None:intergenic |
| GGCATCATCGATACTTCTAC+AGG | 0.546287 | 3_1:+11584283 | Msa0348760:CDS |
| CTTTCTGCCACATAAACTGC+TGG | 0.548485 | 3_1:-11584167 | None:intergenic |
| ATCTGTTCAACCCGAGAGCA+CGG | 0.554290 | 3_1:+11584520 | Msa0348760:CDS |
| ATATCAGTGAACACAACTAA+AGG | 0.562381 | 3_1:+11584809 | Msa0348760:three_prime_UTR |
| AGATTCGATGTCCACACTTG+AGG | 0.562899 | 3_1:-11584630 | None:intergenic |
| CAACCCGAGAGCACGGAGAC+CGG | 0.574229 | 3_1:+11584527 | Msa0348760:CDS |
| TATGTTGAAAAGGATACTGC+TGG | 0.576621 | 3_1:+11583323 | Msa0348760:CDS |
| TTGAACAGATAATGATGTAC+CGG | 0.577772 | 3_1:-11584546 | None:intergenic |
| TGTTGAAAAGGCACATGTGT+TGG | 0.578537 | 3_1:-11582257 | None:intergenic |
| ATATTTGTAATATTGTGTCA+AGG | 0.580936 | 3_1:+11584883 | Msa0348760:three_prime_UTR |
| GATGGTGATGTAGGTTGGGA+AGG | 0.583948 | 3_1:+11583220 | Msa0348760:intron |
| GAGTATGGAATGGTTAGCAG+AGG | 0.584567 | 3_1:+11583244 | Msa0348760:CDS |
| ATGTATACAAGGTTAATGGA+TGG | 0.589265 | 3_1:+11584730 | Msa0348760:three_prime_UTR |
| TGATGATGATAGCTCTGTCT+CGG | 0.593774 | 3_1:-11584420 | None:intergenic |
| TTCTGAGTCTGATTGCAATG+AGG | 0.595506 | 3_1:+11582348 | Msa0348760:CDS |
| TCATCGATACTTCTACAGGT+TGG | 0.599103 | 3_1:+11584287 | Msa0348760:CDS |
| TGAAATACTCATTGTTGACA+TGG | 0.599498 | 3_1:-11585049 | None:intergenic |
| AATATGAGCTTATGTATACA+AGG | 0.601253 | 3_1:+11584719 | Msa0348760:three_prime_UTR |
| GATCGAGTAGGCAGTTCAGC+CGG | 0.604978 | 3_1:+11584940 | Msa0348760:three_prime_UTR |
| GACAAATATATATTCAGTCG+AGG | 0.616952 | 3_1:+11583349 | Msa0348760:CDS |
| TTGGGAAGGTGAGTATGGAA+TGG | 0.617296 | 3_1:+11583234 | Msa0348760:CDS |
| TTGATGTAGTAACTAAGTGA+TGG | 0.619070 | 3_1:-11584353 | None:intergenic |
| TGTGTGTTAAGAATTAAGAT+GGG | 0.623015 | 3_1:-11582055 | None:intergenic |
| AGATGATGATAGAACCGTCT+CGG | 0.624490 | 3_1:-11584501 | None:intergenic |
| GTCCAACCCTGCTTACGACG+TGG | 0.625515 | 3_1:-11583296 | None:intergenic |
| TAGCTCTGTCTCGGCTGTCA+CGG | 0.629380 | 3_1:-11584411 | None:intergenic |
| TTTCAAAAGCCGGATCGAGT+AGG | 0.633660 | 3_1:+11584928 | Msa0348760:three_prime_UTR |
| TATCCACCACGTCGTAAGCA+GGG | 0.636876 | 3_1:+11583290 | Msa0348760:CDS |
| GTGTTAAGAATTAAGATGGG+TGG | 0.650058 | 3_1:-11582052 | None:intergenic |
| TGCACTGATCTCAATTGCCG+CGG | 0.650728 | 3_1:+11584262 | Msa0348760:CDS |
| TCAGCCAGAGACCTCAAGTG+TGG | 0.655701 | 3_1:+11584619 | Msa0348760:CDS |
| CAACCCTGCTTACGACGTGG+TGG | 0.656386 | 3_1:-11583293 | None:intergenic |
| TAGAAGTATCGATGATGCCG+CGG | 0.670793 | 3_1:-11584279 | None:intergenic |
| AACACAGCAGCAATTGCTGG+TGG | 0.671200 | 3_1:+11584236 | Msa0348760:CDS |
| TCAACCTGAGAGCACTGAGA+CGG | 0.673669 | 3_1:+11584448 | Msa0348760:CDS |
| TGAACTAACTTCCTTATCAG+GGG | 0.680079 | 3_1:-11582380 | None:intergenic |
| TCAACCCGAGAGCACCGAGA+CGG | 0.695503 | 3_1:+11584487 | Msa0348760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATAGTTAAGAAAATTA+AGG | + | chr3_1:11582471-11582490 | Msa0348760:intron | 10.0% |
| !!! | TAGAATTTTTTCTATTATTA+AGG | + | chr3_1:11583373-11583392 | Msa0348760:intron | 10.0% |
| !!! | TAAAACAATATGTTTTGATT+TGG | - | chr3_1:11582529-11582548 | None:intergenic | 15.0% |
| !! | AAATATAAACACACTTAATT+TGG | - | chr3_1:11584770-11584789 | None:intergenic | 15.0% |
| !! | AGAAAAAAGATTCCAATTAT+AGG | - | chr3_1:11582126-11582145 | None:intergenic | 20.0% |
| !! | AATCATTCATTTACCAATAA+TGG | + | chr3_1:11582207-11582226 | Msa0348760:exon | 20.0% |
| !! | TAAGAAAATTAAGGAAAACT+AGG | + | chr3_1:11582480-11582499 | Msa0348760:intron | 20.0% |
| !!! | GTCAATTTGAATATTGTTTT+TGG | + | chr3_1:11582648-11582667 | Msa0348760:intron | 20.0% |
| !! | AGTTTAGAAATTACTGAATT+AGG | + | chr3_1:11582877-11582896 | Msa0348760:intron | 20.0% |
| !!! | TAGAATAATATAGTCTTAGA+AGG | + | chr3_1:11582937-11582956 | Msa0348760:intron | 20.0% |
| !!! | AATTTTACAGTATTTAGTTG+AGG | + | chr3_1:11583570-11583589 | Msa0348760:intron | 20.0% |
| !! | TTGACACAATATTACAAATA+TGG | - | chr3_1:11584884-11584903 | None:intergenic | 20.0% |
| !! | ATATTTGTAATATTGTGTCA+AGG | + | chr3_1:11584883-11584902 | Msa0348760:three_prime_UTR | 20.0% |
| ! | TGTGTGTTAAGAATTAAGAT+GGG | - | chr3_1:11582058-11582077 | None:intergenic | 25.0% |
| !! | AGATTCCAATTATAGGATTT+TGG | - | chr3_1:11582119-11582138 | None:intergenic | 25.0% |
| !!! | GTTAATCTTTTGTTTCTTCA+AGG | - | chr3_1:11582293-11582312 | None:intergenic | 25.0% |
| ! | GCACACAATTAAGTAAAAAA+TGG | - | chr3_1:11582419-11582438 | None:intergenic | 25.0% |
| !!! | CAAAAGGTGTTTGTTTATTT+TGG | + | chr3_1:11582596-11582615 | Msa0348760:intron | 25.0% |
| !!! | GTGTTTGTTTATTTTGGTTT+TGG | + | chr3_1:11582602-11582621 | Msa0348760:intron | 25.0% |
| ! | CCTTTGTATAATTTGATTAG+CGG | + | chr3_1:11582626-11582645 | Msa0348760:intron | 25.0% |
| ! | TTCATCTTGATTAGAAATTC+GGG | - | chr3_1:11583171-11583190 | None:intergenic | 25.0% |
| ! | GTTCATCTTGATTAGAAATT+CGG | - | chr3_1:11583172-11583191 | None:intergenic | 25.0% |
| ! | TTCTAATCAAGATGAACAAA+AGG | + | chr3_1:11583175-11583194 | Msa0348760:intron | 25.0% |
| ! | CATACATACATAAAGATCAA+AGG | - | chr3_1:11583433-11583452 | None:intergenic | 25.0% |
| ! | AGTATTTAGTTGAGGAAAAA+TGG | + | chr3_1:11583578-11583597 | Msa0348760:intron | 25.0% |
| ! | GTAATACAAAAATCACAGTT+TGG | + | chr3_1:11583749-11583768 | Msa0348760:intron | 25.0% |
| ! | TTAAATAAGTCAATCCAAAC+AGG | + | chr3_1:11584012-11584031 | Msa0348760:intron | 25.0% |
| ! | AATATGAGCTTATGTATACA+AGG | + | chr3_1:11584719-11584738 | Msa0348760:three_prime_UTR | 25.0% |
| !! | AGTGTGTTTATATTTTGCTA+AGG | + | chr3_1:11584775-11584794 | Msa0348760:three_prime_UTR | 25.0% |
| !! | AATATGGTTTCACTATTTTG+AGG | - | chr3_1:11584868-11584887 | None:intergenic | 25.0% |
| ! | AAAAGTAATGTTTCAAAAGC+CGG | + | chr3_1:11584918-11584937 | Msa0348760:three_prime_UTR | 25.0% |
| GTGTGTGTTAAGAATTAAGA+TGG | - | chr3_1:11582059-11582078 | None:intergenic | 30.0% | |
| !!! | GATTTTGGTTTGGTTTTTGA+TGG | - | chr3_1:11582104-11582123 | None:intergenic | 30.0% |
| !!! | CCAATTATAGGATTTTGGTT+TGG | - | chr3_1:11582114-11582133 | None:intergenic | 30.0% |
| CCAAACCAAAATCCTATAAT+TGG | + | chr3_1:11582111-11582130 | Msa0348760:five_prime_UTR | 30.0% | |
| ! | GGAGAATTTTCTTGTTGAAA+AGG | - | chr3_1:11582272-11582291 | None:intergenic | 30.0% |
| ATGAACTAACTTCCTTATCA+GGG | - | chr3_1:11582384-11582403 | None:intergenic | 30.0% | |
| AATGAACTAACTTCCTTATC+AGG | - | chr3_1:11582385-11582404 | None:intergenic | 30.0% | |
| TGTTATGCTTTGCTTACAAA+AGG | + | chr3_1:11582580-11582599 | Msa0348760:intron | 30.0% | |
| CCGCTAATCAAATTATACAA+AGG | - | chr3_1:11582629-11582648 | None:intergenic | 30.0% | |
| !!! | TTTTTCATATAGCTCTAGCA+TGG | + | chr3_1:11582685-11582704 | Msa0348760:intron | 30.0% |
| !!! | TCTAGCATGGTTTTAAATTG+TGG | + | chr3_1:11582698-11582717 | Msa0348760:intron | 30.0% |
| ! | TGTTTTCACGCAATATAAAG+AGG | - | chr3_1:11582742-11582761 | None:intergenic | 30.0% |
| TGAAAACACAGTCAAAATTG+TGG | + | chr3_1:11582754-11582773 | Msa0348760:intron | 30.0% | |
| ! | TCACACTATAAAGGATTTTG+AGG | - | chr3_1:11582799-11582818 | None:intergenic | 30.0% |
| ! | TATAGTCTTAGAAGGATAGT+TGG | + | chr3_1:11582945-11582964 | Msa0348760:intron | 30.0% |
| !! | AATTCGGGTTGTACATAAAA+TGG | - | chr3_1:11583156-11583175 | None:intergenic | 30.0% |
| GACAAATATATATTCAGTCG+AGG | + | chr3_1:11583349-11583368 | Msa0348760:CDS | 30.0% | |
| ACATGCTCAACAAAATCAAA+GGG | - | chr3_1:11583471-11583490 | None:intergenic | 30.0% | |
| TACATGCTCAACAAAATCAA+AGG | - | chr3_1:11583472-11583491 | None:intergenic | 30.0% | |
| ATTTAGTTGAGGAAAAATGG+AGG | + | chr3_1:11583581-11583600 | Msa0348760:intron | 30.0% | |
| TTTAGTTGAGGAAAAATGGA+GGG | + | chr3_1:11583582-11583601 | Msa0348760:intron | 30.0% | |
| ATAGGAGCAAATATTGAATC+AGG | - | chr3_1:11583634-11583653 | None:intergenic | 30.0% | |
| TACACGTGATATTTAATGCA+AGG | - | chr3_1:11583727-11583746 | None:intergenic | 30.0% | |
| ! | TTATTTTCATAAGCTCTCCA+AGG | - | chr3_1:11583919-11583938 | None:intergenic | 30.0% |
| AAATGATGCCTTAAGAATCT+AGG | + | chr3_1:11584083-11584102 | Msa0348760:intron | 30.0% | |
| TTTAAGGACCTAGATTCTTA+AGG | - | chr3_1:11584094-11584113 | None:intergenic | 30.0% | |
| ! | CTAGGTCCTTAAATTTTCTA+TGG | + | chr3_1:11584101-11584120 | Msa0348760:intron | 30.0% |
| CGAATGCCATAGAAAATTTA+AGG | - | chr3_1:11584110-11584129 | None:intergenic | 30.0% | |
| TTGATGTAGTAACTAAGTGA+TGG | - | chr3_1:11584356-11584375 | None:intergenic | 30.0% | |
| TTGAACAGATAATGATGTAC+CGG | - | chr3_1:11584549-11584568 | None:intergenic | 30.0% | |
| !! | CCATGCTTTTAAAGAAAAAG+TGG | - | chr3_1:11584675-11584694 | None:intergenic | 30.0% |
| !!! | CCACTTTTTCTTTAAAAGCA+TGG | + | chr3_1:11584672-11584691 | Msa0348760:three_prime_UTR | 30.0% |
| GCTTATGTATACAAGGTTAA+TGG | + | chr3_1:11584726-11584745 | Msa0348760:three_prime_UTR | 30.0% | |
| ATGTATACAAGGTTAATGGA+TGG | + | chr3_1:11584730-11584749 | Msa0348760:three_prime_UTR | 30.0% | |
| ATATCAGTGAACACAACTAA+AGG | + | chr3_1:11584809-11584828 | Msa0348760:three_prime_UTR | 30.0% | |
| TATTGTGTCAAGGATTTCAA+AGG | + | chr3_1:11584893-11584912 | Msa0348760:three_prime_UTR | 30.0% | |
| CAAACATTTGTAATGTGACT+GGG | - | chr3_1:11585004-11585023 | None:intergenic | 30.0% | |
| TCAAACATTTGTAATGTGAC+TGG | - | chr3_1:11585005-11585024 | None:intergenic | 30.0% | |
| CACATTACAAATGTTTGAAC+TGG | + | chr3_1:11585007-11585026 | Msa0348760:three_prime_UTR | 30.0% | |
| TGTTTGAACTGGAATTGAAT+TGG | + | chr3_1:11585018-11585037 | Msa0348760:three_prime_UTR | 30.0% | |
| GTTTGAACTGGAATTGAATT+GGG | + | chr3_1:11585019-11585038 | Msa0348760:three_prime_UTR | 30.0% | |
| TGAAATACTCATTGTTGACA+TGG | - | chr3_1:11585052-11585071 | None:intergenic | 30.0% | |
| GTGTTAAGAATTAAGATGGG+TGG | - | chr3_1:11582055-11582074 | None:intergenic | 35.0% | |
| TGATGGAGAAAGAAGGTTTA+TGG | - | chr3_1:11582087-11582106 | None:intergenic | 35.0% | |
| ! | TGGTTTTTGATGGAGAAAGA+AGG | - | chr3_1:11582094-11582113 | None:intergenic | 35.0% |
| TGTAATGCACAAGCCATTAT+TGG | - | chr3_1:11582223-11582242 | None:intergenic | 35.0% | |
| TGAACTAACTTCCTTATCAG+GGG | - | chr3_1:11582383-11582402 | None:intergenic | 35.0% | |
| !!! | AGCATGGTTTTAAATTGTGG+TGG | + | chr3_1:11582701-11582720 | Msa0348760:intron | 35.0% |
| !!! | ATGGTTTTAAATTGTGGTGG+CGG | + | chr3_1:11582704-11582723 | Msa0348760:intron | 35.0% |
| CAAATGCAGTCACACTATAA+AGG | - | chr3_1:11582808-11582827 | None:intergenic | 35.0% | |
| TGGACTGCAATTTATAACCA+TGG | + | chr3_1:11582834-11582853 | Msa0348760:intron | 35.0% | |
| AGACCTATTCAGCGATATTA+CGG | + | chr3_1:11582972-11582991 | Msa0348760:intron | 35.0% | |
| TTTCCGTAATATCGCTGAAT+AGG | - | chr3_1:11582978-11582997 | None:intergenic | 35.0% | |
| !! | GTAGAAAGTCCATTTGTTGT+CGG | + | chr3_1:11583001-11583020 | Msa0348760:intron | 35.0% |
| !! | CAACAAAGGATTAGCTTCTT+TGG | - | chr3_1:11583201-11583220 | None:intergenic | 35.0% |
| AGAAGCTAATCCTTTGTTGA+TGG | + | chr3_1:11583202-11583221 | Msa0348760:intron | 35.0% | |
| TATGTTGAAAAGGATACTGC+TGG | + | chr3_1:11583323-11583342 | Msa0348760:CDS | 35.0% | |
| ATATTTGCTCCTATCGAATG+TGG | + | chr3_1:11583640-11583659 | Msa0348760:intron | 35.0% | |
| TATTTGCTCCTATCGAATGT+GGG | + | chr3_1:11583641-11583660 | Msa0348760:intron | 35.0% | |
| !!! | GTTGTTTTTGTAAGCTCTCT+TGG | + | chr3_1:11583892-11583911 | Msa0348760:intron | 35.0% |
| TGAGATTCAACTTGAACTTG+AGG | - | chr3_1:11584596-11584615 | None:intergenic | 35.0% | |
| GAATTAAGATGGGTGGTTTG+TGG | - | chr3_1:11582048-11582067 | None:intergenic | 40.0% | |
| ! | TGTTGAAAAGGCACATGTGT+TGG | - | chr3_1:11582260-11582279 | None:intergenic | 40.0% |
| TTCTGAGTCTGATTGCAATG+AGG | + | chr3_1:11582348-11582367 | Msa0348760:CDS | 40.0% | |
| AGCAAAGCATAACAGCTACT+TGG | - | chr3_1:11582574-11582593 | None:intergenic | 40.0% | |
| AGATAGACACCGACAACAAA+TGG | - | chr3_1:11583013-11583032 | None:intergenic | 40.0% | |
| !! | TCCTTTGTTGATGGTGATGT+AGG | + | chr3_1:11583211-11583230 | Msa0348760:intron | 40.0% |
| ACCTACATCACCATCAACAA+AGG | - | chr3_1:11583215-11583234 | None:intergenic | 40.0% | |
| !! | TTGTTGATGGTGATGTAGGT+TGG | + | chr3_1:11583215-11583234 | Msa0348760:intron | 40.0% |
| !! | TGTTGATGGTGATGTAGGTT+GGG | + | chr3_1:11583216-11583235 | Msa0348760:intron | 40.0% |
| GAGGAGAAGACAAAAGTAGT+AGG | + | chr3_1:11583263-11583282 | Msa0348760:CDS | 40.0% | |
| TTGGACAGGCTATGTTGAAA+AGG | + | chr3_1:11583313-11583332 | Msa0348760:CDS | 40.0% | |
| ATTTGCTCCTATCGAATGTG+GGG | + | chr3_1:11583642-11583661 | Msa0348760:intron | 40.0% | |
| AAATCTTCCCCACATTCGAT+AGG | - | chr3_1:11583652-11583671 | None:intergenic | 40.0% | |
| TCTACTAGTATAGCCACTTG+CGG | - | chr3_1:11583987-11584006 | None:intergenic | 40.0% | |
| !! | GCAGAAAGTGCTATAAGTTC+AGG | + | chr3_1:11584182-11584201 | Msa0348760:CDS | 40.0% |
| GCTATAAGTTCAGGAACATC+TGG | + | chr3_1:11584191-11584210 | Msa0348760:CDS | 40.0% | |
| !! | ACATCTGGTTCTTCTTCTGA+TGG | + | chr3_1:11584206-11584225 | Msa0348760:CDS | 40.0% |
| TCATCGATACTTCTACAGGT+TGG | + | chr3_1:11584287-11584306 | Msa0348760:CDS | 40.0% | |
| ! | TATTCGACTTTTTGGACCTG+AGG | - | chr3_1:11584326-11584345 | None:intergenic | 40.0% |
| GTCCAAAAAGTCGAATACTC+CGG | + | chr3_1:11584329-11584348 | Msa0348760:CDS | 40.0% | |
| TCCAAAAAGTCGAATACTCC+GGG | + | chr3_1:11584330-11584349 | Msa0348760:CDS | 40.0% | |
| ! | TGATGATGATAGCTCTGTCT+CGG | - | chr3_1:11584423-11584442 | None:intergenic | 40.0% |
| AGATGATGATAGAACCGTCT+CGG | - | chr3_1:11584504-11584523 | None:intergenic | 40.0% | |
| ! | AACTTCTGCAGGAGAGTTTT+CGG | - | chr3_1:11584573-11584592 | None:intergenic | 40.0% |
| GATTAAACCAACTGACGAAC+GGG | - | chr3_1:11584982-11585001 | None:intergenic | 40.0% | |
| GGATTAAACCAACTGACGAA+CGG | - | chr3_1:11584983-11585002 | None:intergenic | 40.0% | |
| !! | GGCACATGTGTTGGTTGTTA+TGG | - | chr3_1:11582251-11582270 | None:intergenic | 45.0% |
| TGTGACTGCATTTGCGATTG+TGG | + | chr3_1:11582814-11582833 | Msa0348760:intron | 45.0% | |
| ACTACTACAACTGCAGTCCA+TGG | - | chr3_1:11582854-11582873 | None:intergenic | 45.0% | |
| TTGGGAAGGTGAGTATGGAA+TGG | + | chr3_1:11583234-11583253 | Msa0348760:CDS | 45.0% | |
| GAGTATGGAATGGTTAGCAG+AGG | + | chr3_1:11583244-11583263 | Msa0348760:CDS | 45.0% | |
| AGTTGAGGAAAAATGGAGGG+AGG | + | chr3_1:11583585-11583604 | Msa0348760:intron | 45.0% | |
| GTTGAGGAAAAATGGAGGGA+GGG | + | chr3_1:11583586-11583605 | Msa0348760:intron | 45.0% | |
| TTGAGGAAAAATGGAGGGAG+GGG | + | chr3_1:11583587-11583606 | Msa0348760:intron | 45.0% | |
| GAATGTGGGGAAGATTTGCA+TGG | + | chr3_1:11583655-11583674 | Msa0348760:intron | 45.0% | |
| TTGTAAGCTCTCTTGGTCCT+TGG | + | chr3_1:11583899-11583918 | Msa0348760:intron | 45.0% | |
| AGCATGACTTTGTGCCTGTT+TGG | - | chr3_1:11584029-11584048 | None:intergenic | 45.0% | |
| ! | CATAAACTGCTGGCTGGAAA+AGG | - | chr3_1:11584160-11584179 | None:intergenic | 45.0% |
| TTTCCAGCCAGCAGTTTATG+TGG | + | chr3_1:11584160-11584179 | Msa0348760:intron | 45.0% | |
| CTTTCTGCCACATAAACTGC+TGG | - | chr3_1:11584170-11584189 | None:intergenic | 45.0% | |
| !! | TAGAAGTATCGATGATGCCG+CGG | - | chr3_1:11584282-11584301 | None:intergenic | 45.0% |
| GGCATCATCGATACTTCTAC+AGG | + | chr3_1:11584283-11584302 | Msa0348760:CDS | 45.0% | |
| TGGTAAGAATTCTCCTCCTC+AGG | + | chr3_1:11584307-11584326 | Msa0348760:CDS | 45.0% | |
| GTAGTAACTAAGTGATGGCC+CGG | - | chr3_1:11584351-11584370 | None:intergenic | 45.0% | |
| TGAACTTGAGGAACTTCTGC+AGG | - | chr3_1:11584584-11584603 | None:intergenic | 45.0% | |
| AGATTCGATGTCCACACTTG+AGG | - | chr3_1:11584633-11584652 | None:intergenic | 45.0% | |
| TTTCAAAAGCCGGATCGAGT+AGG | + | chr3_1:11584928-11584947 | Msa0348760:three_prime_UTR | 45.0% | |
| CAGCCGGTTGAATTGTGAAT+TGG | + | chr3_1:11584956-11584975 | Msa0348760:three_prime_UTR | 45.0% | |
| GGGCCAATTCACAATTCAAC+CGG | - | chr3_1:11584962-11584981 | None:intergenic | 45.0% | |
| GGAAGAATGTGCCCCTGATA+AGG | + | chr3_1:11582369-11582388 | Msa0348760:CDS | 50.0% | |
| TGTGGTTGCAATGTCGTTGC+AGG | + | chr3_1:11582772-11582791 | Msa0348760:intron | 50.0% | |
| ! | GATGGTGATGTAGGTTGGGA+AGG | + | chr3_1:11583220-11583239 | Msa0348760:intron | 50.0% |
| ! | GTAGGTTGGGAAGGTGAGTA+TGG | + | chr3_1:11583229-11583248 | Msa0348760:intron | 50.0% |
| ATATCCACCACGTCGTAAGC+AGG | + | chr3_1:11583289-11583308 | Msa0348760:CDS | 50.0% | |
| TATCCACCACGTCGTAAGCA+GGG | + | chr3_1:11583290-11583309 | Msa0348760:CDS | 50.0% | |
| TGTGGGGAAGATTTGCATGG+TGG | + | chr3_1:11583658-11583677 | Msa0348760:intron | 50.0% | |
| AGTATAGCCACTTGCGGAAC+TGG | - | chr3_1:11583981-11584000 | None:intergenic | 50.0% | |
| CAGAACACAGCAGCAATTGC+TGG | + | chr3_1:11584233-11584252 | Msa0348760:CDS | 50.0% | |
| AACACAGCAGCAATTGCTGG+TGG | + | chr3_1:11584236-11584255 | Msa0348760:CDS | 50.0% | |
| ! | TGCACTGATCTCAATTGCCG+CGG | + | chr3_1:11584262-11584281 | Msa0348760:CDS | 50.0% |
| ! | TCGACTTTTTGGACCTGAGG+AGG | - | chr3_1:11584323-11584342 | None:intergenic | 50.0% |
| !! | GCCCGGAGTATTCGACTTTT+TGG | - | chr3_1:11584334-11584353 | None:intergenic | 50.0% |
| !! | TCAACCTGAGAGCACTGAGA+CGG | + | chr3_1:11584448-11584467 | Msa0348760:CDS | 50.0% |
| ATCTGTTCAACCCGAGAGCA+CGG | + | chr3_1:11584520-11584539 | Msa0348760:CDS | 50.0% | |
| ATGTCCACACTTGAGGTCTC+TGG | - | chr3_1:11584626-11584645 | None:intergenic | 50.0% | |
| GGGGAAGATTTGCATGGTGG+AGG | + | chr3_1:11583661-11583680 | Msa0348760:intron | 55.0% | |
| CTCTCAACCAGTTCCGCAAG+TGG | + | chr3_1:11583971-11583990 | Msa0348760:intron | 55.0% | |
| CTGCCACATAAACTGCTGGC+TGG | - | chr3_1:11584166-11584185 | None:intergenic | 55.0% | |
| ! | TAGCTCTGTCTCGGCTGTCA+CGG | - | chr3_1:11584414-11584433 | None:intergenic | 55.0% |
| AGTACCGTCTCAGTGCTCTC+AGG | - | chr3_1:11584455-11584474 | None:intergenic | 55.0% | |
| !! | TAGAACCGTCTCGGTGCTCT+CGG | - | chr3_1:11584495-11584514 | None:intergenic | 55.0% |
| TCAGCCAGAGACCTCAAGTG+TGG | + | chr3_1:11584619-11584638 | Msa0348760:CDS | 55.0% | |
| GCTGAACTGCCTACTCGATC+CGG | - | chr3_1:11584940-11584959 | None:intergenic | 55.0% | |
| GATCGAGTAGGCAGTTCAGC+CGG | + | chr3_1:11584940-11584959 | Msa0348760:three_prime_UTR | 55.0% | |
| GAATTGGCCCGTTCGTCAGT+TGG | + | chr3_1:11584972-11584991 | Msa0348760:three_prime_UTR | 55.0% | |
| CAACCCTGCTTACGACGTGG+TGG | - | chr3_1:11583296-11583315 | None:intergenic | 60.0% | |
| CACCACGTCGTAAGCAGGGT+TGG | + | chr3_1:11583294-11583313 | Msa0348760:CDS | 60.0% | |
| GTCCAACCCTGCTTACGACG+TGG | - | chr3_1:11583299-11583318 | None:intergenic | 60.0% | |
| CGTCGTAAGCAGGGTTGGAC+AGG | + | chr3_1:11583299-11583318 | Msa0348760:CDS | 60.0% | |
| !! | TCAACCCGAGAGCACCGAGA+CGG | + | chr3_1:11584487-11584506 | Msa0348760:CDS | 60.0% |
| !! | AGAACCGTCTCGGTGCTCTC+GGG | - | chr3_1:11584494-11584513 | None:intergenic | 60.0% |
| ! | TGTACCGGTCTCCGTGCTCT+CGG | - | chr3_1:11584534-11584553 | None:intergenic | 60.0% |
| TCTGTCTCGGCTGTCACGGC+AGG | - | chr3_1:11584410-11584429 | None:intergenic | 65.0% | |
| ! | CAACCCGAGAGCACGGAGAC+CGG | + | chr3_1:11584527-11584546 | Msa0348760:CDS | 65.0% |
| ! | GTACCGGTCTCCGTGCTCTC+GGG | - | chr3_1:11584533-11584552 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 11582027 | 11585085 | 11582027 | ID=Msa0348760;Name=Msa0348760 |
| chr3_1 | mRNA | 11582027 | 11585085 | 11582027 | ID=Msa0348760-mRNA-1;Parent=Msa0348760;Name=Msa0348760-mRNA-1;_AED=0.01;_eAED=0.01;_QI=199|1|1|1|1|1|3|430|264 |
| chr3_1 | exon | 11582027 | 11582393 | 11582027 | ID=Msa0348760-mRNA-1:exon:3020;Parent=Msa0348760-mRNA-1 |
| chr3_1 | exon | 11583233 | 11583370 | 11583233 | ID=Msa0348760-mRNA-1:exon:3021;Parent=Msa0348760-mRNA-1 |
| chr3_1 | exon | 11584167 | 11585085 | 11584167 | ID=Msa0348760-mRNA-1:exon:3022;Parent=Msa0348760-mRNA-1 |
| chr3_1 | five_prime_UTR | 11582027 | 11582225 | 11582027 | ID=Msa0348760-mRNA-1:five_prime_utr;Parent=Msa0348760-mRNA-1 |
| chr3_1 | CDS | 11582226 | 11582393 | 11582226 | ID=Msa0348760-mRNA-1:cds;Parent=Msa0348760-mRNA-1 |
| chr3_1 | CDS | 11583233 | 11583370 | 11583233 | ID=Msa0348760-mRNA-1:cds;Parent=Msa0348760-mRNA-1 |
| chr3_1 | CDS | 11584167 | 11584655 | 11584167 | ID=Msa0348760-mRNA-1:cds;Parent=Msa0348760-mRNA-1 |
| chr3_1 | three_prime_UTR | 11584656 | 11585085 | 11584656 | ID=Msa0348760-mRNA-1:three_prime_utr;Parent=Msa0348760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
