Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292760 | XP_013446149.1 | 88.636 | 132 | 13 | 1 | 1 | 132 | 1 | 130 | 1.77e-71 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292760 | sp|O22714|PPR86_ARATH | 59.524 | 126 | 50 | 1 | 4 | 128 | 3 | 128 | 1.98e-44 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292760 | A0A072TSI9 | 88.636 | 132 | 13 | 1 | 1 | 132 | 1 | 130 | 8.45e-72 | 232 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa1292760 | 0.817617 | 3.005404e-52 | -8.615850e-47 |
| Msa0015390 | Msa1292760 | 0.818941 | 1.507230e-52 | -8.615850e-47 |
| Msa0017510 | Msa1292760 | 0.860852 | 1.546742e-63 | -8.615850e-47 |
| Msa0031340 | Msa1292760 | 0.828502 | 8.676005e-55 | -8.615850e-47 |
| Msa0050390 | Msa1292760 | 0.812482 | 4.147371e-51 | -8.615850e-47 |
| Msa0052730 | Msa1292760 | 0.813280 | 2.771939e-51 | -8.615850e-47 |
| Msa0078900 | Msa1292760 | 0.810240 | 1.271977e-50 | -8.615850e-47 |
| Msa0110970 | Msa1292760 | 0.813357 | 2.667327e-51 | -8.615850e-47 |
| Msa0114060 | Msa1292760 | 0.828683 | 7.842598e-55 | -8.615850e-47 |
| Msa0115270 | Msa1292760 | 0.806048 | 9.940455e-50 | -8.615850e-47 |
| Msa0604510 | Msa1292760 | 0.827972 | 1.164590e-54 | -8.615850e-47 |
| Msa0610430 | Msa1292760 | 0.811724 | 6.068026e-51 | -8.615850e-47 |
| Msa0617640 | Msa1292760 | 0.807964 | 3.906989e-50 | -8.615850e-47 |
| Msa0625720 | Msa1292760 | 0.802067 | 6.690153e-49 | -8.615850e-47 |
| Msa0626090 | Msa1292760 | 0.804035 | 2.620084e-49 | -8.615850e-47 |
| Msa0657970 | Msa1292760 | 0.804135 | 2.497659e-49 | -8.615850e-47 |
| Msa0661190 | Msa1292760 | -0.809006 | 2.341423e-50 | -8.615850e-47 |
| Msa0661650 | Msa1292760 | 0.807300 | 5.405922e-50 | -8.615850e-47 |
| Msa0663240 | Msa1292760 | 0.818088 | 2.352745e-52 | -8.615850e-47 |
| Msa0663390 | Msa1292760 | 0.815466 | 9.111037e-52 | -8.615850e-47 |
| Msa0667050 | Msa1292760 | 0.801102 | 1.055009e-48 | -8.615850e-47 |
| Msa0669320 | Msa1292760 | 0.807724 | 4.396094e-50 | -8.615850e-47 |
| Msa0672690 | Msa1292760 | 0.810338 | 1.211397e-50 | -8.615850e-47 |
| Msa0674580 | Msa1292760 | 0.816119 | 6.518523e-52 | -8.615850e-47 |
| Msa0682840 | Msa1292760 | 0.819762 | 9.795205e-53 | -8.615850e-47 |
| Msa0688480 | Msa1292760 | 0.825433 | 4.701477e-54 | -8.615850e-47 |
| Msa0693380 | Msa1292760 | 0.801910 | 7.204843e-49 | -8.615850e-47 |
| Msa0698770 | Msa1292760 | 0.810427 | 1.158729e-50 | -8.615850e-47 |
| Msa0698920 | Msa1292760 | 0.806209 | 9.190519e-50 | -8.615850e-47 |
| Msa0728630 | Msa1292760 | 0.803436 | 3.488981e-49 | -8.615850e-47 |
| Msa0731940 | Msa1292760 | 0.801784 | 7.645556e-49 | -8.615850e-47 |
| Msa0735170 | Msa1292760 | 0.809784 | 1.594884e-50 | -8.615850e-47 |
| Msa0740510 | Msa1292760 | 0.802737 | 4.868116e-49 | -8.615850e-47 |
| Msa0777230 | Msa1292760 | 0.809728 | 1.639258e-50 | -8.615850e-47 |
| Msa0803890 | Msa1292760 | 0.802488 | 5.477936e-49 | -8.615850e-47 |
| Msa0808270 | Msa1292760 | 0.807543 | 4.800822e-50 | -8.615850e-47 |
| Msa0810220 | Msa1292760 | 0.818669 | 1.737814e-52 | -8.615850e-47 |
| Msa0820770 | Msa1292760 | 0.808709 | 2.710271e-50 | -8.615850e-47 |
| Msa0820850 | Msa1292760 | 0.800341 | 1.508231e-48 | -8.615850e-47 |
| Msa0824660 | Msa1292760 | 0.815731 | 7.955458e-52 | -8.615850e-47 |
| Msa0828560 | Msa1292760 | 0.803967 | 2.706726e-49 | -8.615850e-47 |
| Msa0838580 | Msa1292760 | 0.809614 | 1.734565e-50 | -8.615850e-47 |
| Msa0124060 | Msa1292760 | 0.810915 | 9.092141e-51 | -8.615850e-47 |
| Msa0136070 | Msa1292760 | 0.819974 | 8.760697e-53 | -8.615850e-47 |
| Msa0157290 | Msa1292760 | 0.861096 | 1.303985e-63 | -8.615850e-47 |
| Msa0159930 | Msa1292760 | 0.801287 | 9.669784e-49 | -8.615850e-47 |
| Msa0160550 | Msa1292760 | 0.819040 | 1.430666e-52 | -8.615850e-47 |
| Msa0168500 | Msa1292760 | 0.804919 | 1.714202e-49 | -8.615850e-47 |
| Msa0171540 | Msa1292760 | 0.819855 | 9.328230e-53 | -8.615850e-47 |
| Msa0195980 | Msa1292760 | 0.810336 | 1.212461e-50 | -8.615850e-47 |
| Msa0212990 | Msa1292760 | 0.822334 | 2.504403e-53 | -8.615850e-47 |
| Msa0215320 | Msa1292760 | -0.819961 | 8.819671e-53 | -8.615850e-47 |
| Msa0220580 | Msa1292760 | 0.800437 | 1.442166e-48 | -8.615850e-47 |
| Msa0220740 | Msa1292760 | 0.813113 | 3.016934e-51 | -8.615850e-47 |
| Msa1228590 | Msa1292760 | 0.831309 | 1.795721e-55 | -8.615850e-47 |
| Msa1233890 | Msa1292760 | 0.810906 | 9.131217e-51 | -8.615850e-47 |
| Msa1238930 | Msa1292760 | 0.844344 | 8.014653e-59 | -8.615850e-47 |
| Msa1244250 | Msa1292760 | 0.803768 | 2.977804e-49 | -8.615850e-47 |
| Msa1246510 | Msa1292760 | 0.805288 | 1.434745e-49 | -8.615850e-47 |
| Msa1247250 | Msa1292760 | 0.810586 | 1.070979e-50 | -8.615850e-47 |
| Msa1252140 | Msa1292760 | 0.841516 | 4.531147e-58 | -8.615850e-47 |
| Msa1253020 | Msa1292760 | 0.820232 | 7.648134e-53 | -8.615850e-47 |
| Msa1282580 | Msa1292760 | -0.804505 | 2.091751e-49 | -8.615850e-47 |
| Msa1283840 | Msa1292760 | 0.804860 | 1.763800e-49 | -8.615850e-47 |
| Msa1283860 | Msa1292760 | 0.834894 | 2.301610e-56 | -8.615850e-47 |
| Msa1284550 | Msa1292760 | 0.801669 | 8.072050e-49 | -8.615850e-47 |
| Msa1284680 | Msa1292760 | 0.837379 | 5.382073e-57 | -8.615850e-47 |
| Msa1286800 | Msa1292760 | 0.807440 | 5.050777e-50 | -8.615850e-47 |
| Msa1292760 | Msa1292770 | 0.815549 | 8.735472e-52 | -8.615850e-47 |
| Msa1292760 | Msa1306840 | 0.806198 | 9.243862e-50 | -8.615850e-47 |
| Msa1292760 | Msa1308380 | 0.813588 | 2.372733e-51 | -8.615850e-47 |
| Msa1292760 | Msa1313150 | 0.803744 | 3.011585e-49 | -8.615850e-47 |
| Msa1292760 | Msa1322860 | 0.806152 | 9.448417e-50 | -8.615850e-47 |
| Msa1292760 | Msa1322890 | 0.814175 | 1.761328e-51 | -8.615850e-47 |
| Msa1292760 | Msa1324500 | 0.803826 | 2.896245e-49 | -8.615850e-47 |
| Msa1292760 | Msa1327050 | 0.808182 | 3.511857e-50 | -8.615850e-47 |
| Msa1292760 | Msa1346370 | 0.804769 | 1.842296e-49 | -8.615850e-47 |
| Msa1292760 | Msa1353470 | 0.810631 | 1.046995e-50 | -8.615850e-47 |
| Msa1292760 | Msa1353980 | 0.804447 | 2.151216e-49 | -8.615850e-47 |
| Msa1292760 | Msa1357530 | 0.802159 | 6.402910e-49 | -8.615850e-47 |
| Msa1292760 | Msa1359040 | 0.822522 | 2.264824e-53 | -8.615850e-47 |
| Msa1292760 | Msa1367080 | 0.802542 | 5.339914e-49 | -8.615850e-47 |
| Msa1292760 | Msa1372760 | 0.807578 | 4.719754e-50 | -8.615850e-47 |
| Msa1292760 | Msa1384350 | 0.813033 | 3.141660e-51 | -8.615850e-47 |
| Msa1292760 | Msa1397860 | 0.805313 | 1.417863e-49 | -8.615850e-47 |
| Msa1292760 | Msa1409870 | 0.822786 | 1.965751e-53 | -8.615850e-47 |
| Msa1292760 | Msa1409880 | 0.801605 | 8.320184e-49 | -8.615850e-47 |
| Msa1292760 | Msa1411020 | 0.818788 | 1.632259e-52 | -8.615850e-47 |
| Msa1292760 | Msa1416150 | 0.806793 | 6.923022e-50 | -8.615850e-47 |
| Msa1292760 | Msa1420490 | 0.813174 | 2.925402e-51 | -8.615850e-47 |
| Msa1292760 | Msa1423390 | 0.812887 | 3.381358e-51 | -8.615850e-47 |
| Msa1292760 | Msa1423880 | 0.806214 | 9.171818e-50 | -8.615850e-47 |
| Msa1292760 | Msa1424290 | 0.818541 | 1.857634e-52 | -8.615850e-47 |
| Msa1292760 | Msa1427230 | 0.804889 | 1.739015e-49 | -8.615850e-47 |
| Msa1292760 | Msa1434350 | 0.822538 | 2.245046e-53 | -8.615850e-47 |
| Msa1292760 | Msa1439320 | 0.823007 | 1.746532e-53 | -8.615850e-47 |
| Msa1292760 | Msa1440370 | 0.811821 | 5.780332e-51 | -8.615850e-47 |
| Msa1292760 | Msa1440810 | 0.809870 | 1.528327e-50 | -8.615850e-47 |
| Msa1292760 | Msa1442450 | 0.807179 | 5.736232e-50 | -8.615850e-47 |
| Msa1292760 | Msa1445610 | -0.801387 | 9.221565e-49 | -8.615850e-47 |
| Msa1292760 | Msa1461300 | 0.806078 | 9.794855e-50 | -8.615850e-47 |
| Msa1292760 | Msa1466540 | 0.805662 | 1.197810e-49 | -8.615850e-47 |
| Msa0366240 | Msa1292760 | 0.821802 | 3.326807e-53 | -8.615850e-47 |
| Msa0373930 | Msa1292760 | 0.806705 | 7.225160e-50 | -8.615850e-47 |
| Msa0388960 | Msa1292760 | 0.811032 | 8.573380e-51 | -8.615850e-47 |
| Msa0389340 | Msa1292760 | 0.804133 | 2.499885e-49 | -8.615850e-47 |
| Msa0391430 | Msa1292760 | 0.803719 | 3.048173e-49 | -8.615850e-47 |
| Msa0395790 | Msa1292760 | 0.813980 | 1.944421e-51 | -8.615850e-47 |
| Msa0402290 | Msa1292760 | 0.804080 | 2.564865e-49 | -8.615850e-47 |
| Msa0410650 | Msa1292760 | 0.823283 | 1.505223e-53 | -8.615850e-47 |
| Msa0416300 | Msa1292760 | 0.809596 | 1.750361e-50 | -8.615850e-47 |
| Msa0416650 | Msa1292760 | 0.803222 | 3.864498e-49 | -8.615850e-47 |
| Msa0417270 | Msa1292760 | 0.832341 | 9.992527e-56 | -8.615850e-47 |
| Msa0440400 | Msa1292760 | 0.808025 | 3.792611e-50 | -8.615850e-47 |
| Msa0440750 | Msa1292760 | 0.819318 | 1.236978e-52 | -8.615850e-47 |
| Msa0443260 | Msa1292760 | 0.804861 | 1.762784e-49 | -8.615850e-47 |
| Msa0464680 | Msa1292760 | 0.800027 | 1.747605e-48 | -8.615850e-47 |
| Msa0466390 | Msa1292760 | 0.819798 | 9.613734e-53 | -8.615850e-47 |
| Msa0469030 | Msa1292760 | 0.823442 | 1.382478e-53 | -8.615850e-47 |
| Msa0480980 | Msa1292760 | 0.808267 | 3.369094e-50 | -8.615850e-47 |
| Msa0481530 | Msa1292760 | 0.806765 | 7.018501e-50 | -8.615850e-47 |
| Msa0993290 | Msa1292760 | 0.834500 | 2.891463e-56 | -8.615850e-47 |
| Msa0993600 | Msa1292760 | 0.831042 | 2.088585e-55 | -8.615850e-47 |
| Msa0998690 | Msa1292760 | 0.802961 | 4.376469e-49 | -8.615850e-47 |
| Msa1000860 | Msa1292760 | 0.824407 | 8.208537e-54 | -8.615850e-47 |
| Msa1000900 | Msa1292760 | 0.824049 | 9.960019e-54 | -8.615850e-47 |
| Msa1014540 | Msa1292760 | 0.830106 | 3.539974e-55 | -8.615850e-47 |
| Msa1030970 | Msa1292760 | 0.812587 | 3.934113e-51 | -8.615850e-47 |
| Msa1045200 | Msa1292760 | 0.811359 | 7.282121e-51 | -8.615850e-47 |
| Msa1070010 | Msa1292760 | 0.811542 | 6.647215e-51 | -8.615850e-47 |
| Msa1075220 | Msa1292760 | -0.826561 | 2.535617e-54 | -8.615850e-47 |
| Msa1075540 | Msa1292760 | 0.817648 | 2.957819e-52 | -8.615850e-47 |
| Msa1075650 | Msa1292760 | 0.800726 | 1.258948e-48 | -8.615850e-47 |
| Msa1079590 | Msa1292760 | 0.804144 | 2.487595e-49 | -8.615850e-47 |
| Msa1082500 | Msa1292760 | 0.824924 | 6.201352e-54 | -8.615850e-47 |
| Msa1085200 | Msa1292760 | 0.832055 | 1.175794e-55 | -8.615850e-47 |
| Msa0243710 | Msa1292760 | 0.809359 | 1.967225e-50 | -8.615850e-47 |
| Msa0244860 | Msa1292760 | 0.807589 | 4.696177e-50 | -8.615850e-47 |
| Msa0257460 | Msa1292760 | 0.807438 | 5.054267e-50 | -8.615850e-47 |
| Msa0262510 | Msa1292760 | 0.806937 | 6.453718e-50 | -8.615850e-47 |
| Msa0264150 | Msa1292760 | 0.800070 | 1.712514e-48 | -8.615850e-47 |
| Msa0272690 | Msa1292760 | 0.808252 | 3.392612e-50 | -8.615850e-47 |
| Msa0283450 | Msa1292760 | 0.827185 | 1.798346e-54 | -8.615850e-47 |
| Msa0283520 | Msa1292760 | 0.813264 | 2.794611e-51 | -8.615850e-47 |
| Msa0287650 | Msa1292760 | 0.807535 | 4.820437e-50 | -8.615850e-47 |
| Msa0288100 | Msa1292760 | 0.820424 | 6.908291e-53 | -8.615850e-47 |
| Msa0291540 | Msa1292760 | 0.801898 | 7.245982e-49 | -8.615850e-47 |
| Msa0297960 | Msa1292760 | 0.804491 | 2.105509e-49 | -8.615850e-47 |
| Msa0306210 | Msa1292760 | -0.802287 | 6.025483e-49 | -8.615850e-47 |
| Msa0309770 | Msa1292760 | 0.800027 | 1.747605e-48 | -8.615850e-47 |
| Msa0330340 | Msa1292760 | 0.812943 | 3.287400e-51 | -8.615850e-47 |
| Msa0332000 | Msa1292760 | 0.826698 | 2.352241e-54 | -8.615850e-47 |
| Msa0333030 | Msa1292760 | 0.811334 | 7.376253e-51 | -8.615850e-47 |
| Msa0340450 | Msa1292760 | 0.808411 | 3.138365e-50 | -8.615850e-47 |
| Msa0345970 | Msa1292760 | 0.829471 | 5.054754e-55 | -8.615850e-47 |
| Msa0355220 | Msa1292760 | 0.810998 | 8.721200e-51 | -8.615850e-47 |
| Msa0357340 | Msa1292760 | 0.810744 | 9.900243e-51 | -8.615850e-47 |
| Msa1113170 | Msa1292760 | 0.803115 | 4.066487e-49 | -8.615850e-47 |
| Msa1116130 | Msa1292760 | -0.807017 | 6.206310e-50 | -8.615850e-47 |
| Msa1119480 | Msa1292760 | 0.809172 | 2.157551e-50 | -8.615850e-47 |
| Msa1121490 | Msa1292760 | 0.801405 | 9.146146e-49 | -8.615850e-47 |
| Msa1137570 | Msa1292760 | 0.824915 | 6.229906e-54 | -8.615850e-47 |
| Msa1142020 | Msa1292760 | 0.808689 | 2.737947e-50 | -8.615850e-47 |
| Msa1147900 | Msa1292760 | 0.803264 | 3.787097e-49 | -8.615850e-47 |
| Msa1151910 | Msa1292760 | 0.804011 | 2.650516e-49 | -8.615850e-47 |
| Msa1154280 | Msa1292760 | 0.826721 | 2.322625e-54 | -8.615850e-47 |
| Msa1162550 | Msa1292760 | -0.816865 | 4.435626e-52 | -8.615850e-47 |
| Msa1173100 | Msa1292760 | 0.804691 | 1.913038e-49 | -8.615850e-47 |
| Msa1186060 | Msa1292760 | 0.811761 | 5.955010e-51 | -8.615850e-47 |
| Msa0484780 | Msa1292760 | 0.815916 | 7.232729e-52 | -8.615850e-47 |
| Msa0488560 | Msa1292760 | 0.802397 | 5.721531e-49 | -8.615850e-47 |
| Msa0500360 | Msa1292760 | 0.805341 | 1.398575e-49 | -8.615850e-47 |
| Msa0502890 | Msa1292760 | 0.804761 | 1.849383e-49 | -8.615850e-47 |
| Msa0507680 | Msa1292760 | 0.831517 | 1.596313e-55 | -8.615850e-47 |
| Msa0512750 | Msa1292760 | 0.810208 | 1.291987e-50 | -8.615850e-47 |
| Msa0523460 | Msa1292760 | 0.811679 | 6.205031e-51 | -8.615850e-47 |
| Msa0529040 | Msa1292760 | 0.814443 | 1.536724e-51 | -8.615850e-47 |
| Msa0529890 | Msa1292760 | 0.801853 | 7.400460e-49 | -8.615850e-47 |
| Msa0547320 | Msa1292760 | 0.811145 | 8.103370e-51 | -8.615850e-47 |
| Msa0562440 | Msa1292760 | 0.804232 | 2.384493e-49 | -8.615850e-47 |
| Msa0577500 | Msa1292760 | 0.804706 | 1.898869e-49 | -8.615850e-47 |
| Msa0585230 | Msa1292760 | 0.835533 | 1.587496e-56 | -8.615850e-47 |
| Msa0585560 | Msa1292760 | 0.805404 | 1.357110e-49 | -8.615850e-47 |
| Msa0592440 | Msa1292760 | 0.807191 | 5.703008e-50 | -8.615850e-47 |
| Msa0593650 | Msa1292760 | 0.815354 | 9.652159e-52 | -8.615850e-47 |
| Msa0844240 | Msa1292760 | 0.811718 | 6.084331e-51 | -8.615850e-47 |
| Msa0861090 | Msa1292760 | 0.806482 | 8.053841e-50 | -8.615850e-47 |
| Msa0861130 | Msa1292760 | 0.801292 | 9.644245e-49 | -8.615850e-47 |
| Msa0871270 | Msa1292760 | 0.823454 | 1.373250e-53 | -8.615850e-47 |
| Msa0880140 | Msa1292760 | 0.859862 | 3.082740e-63 | -8.615850e-47 |
| Msa0898670 | Msa1292760 | 0.800058 | 1.722219e-48 | -8.615850e-47 |
| Msa0922410 | Msa1292760 | 0.806957 | 6.391163e-50 | -8.615850e-47 |
| Msa0931520 | Msa1292760 | 0.804532 | 2.065146e-49 | -8.615850e-47 |
| Msa0933230 | Msa1292760 | 0.807767 | 4.302736e-50 | -8.615850e-47 |
| Msa0938220 | Msa1292760 | 0.833883 | 4.129099e-56 | -8.615850e-47 |
| Msa0942200 | Msa1292760 | 0.800834 | 1.196772e-48 | -8.615850e-47 |
| Msa0947660 | Msa1292760 | 0.815381 | 9.519661e-52 | -8.615850e-47 |
| Msa0954130 | Msa1292760 | 0.811787 | 5.877971e-51 | -8.615850e-47 |
| Msa0968680 | Msa1292760 | 0.802855 | 4.601834e-49 | -8.615850e-47 |
| Msa0969520 | Msa1292760 | 0.816250 | 6.093595e-52 | -8.615850e-47 |
| Msa0974080 | Msa1292760 | 0.802293 | 6.009008e-49 | -8.615850e-47 |
| Msa0975340 | Msa1292760 | 0.814241 | 1.703266e-51 | -8.615850e-47 |
| Msa0976670 | Msa1292760 | 0.803920 | 2.768972e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292760 | MtrunA17_Chr8g0368151 | 88.636 | 132 | 13 | 1 | 1 | 132 | 1 | 130 | 1.63e-75 | 232 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292760 | AT1G60770.1 | 59.524 | 126 | 50 | 1 | 4 | 128 | 3 | 128 | 2.01e-45 | 154 |
| Msa1292760 | AT1G02150.1 | 34.426 | 122 | 78 | 1 | 2 | 121 | 46 | 167 | 3.26e-11 | 60.1 |
Find 104 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATATGATTCAGGTTT+TGG | 0.218361 | 8_3:-49328257 | Msa1292760:three_prime_UTR |
| GCAAAGTATACGAGGTTTAT+AGG | 0.245815 | 8_3:-49328330 | Msa1292760:three_prime_UTR |
| ATTACATTGTATGGGAAAAT+AGG | 0.247775 | 8_3:-49328352 | Msa1292760:three_prime_UTR |
| GCTGCAGTTAATGATATTTC+CGG | 0.253859 | 8_3:-49328553 | Msa1292760:three_prime_UTR |
| CAGTTTCTAATTACATTGTA+TGG | 0.283082 | 8_3:-49328361 | Msa1292760:three_prime_UTR |
| GTGGGAAGCGCGTTTATAAA+TGG | 0.289722 | 8_3:-49331529 | Msa1292760:CDS |
| AAGCTATCTGAATATGATTC+AGG | 0.291296 | 8_3:-49328263 | Msa1292760:three_prime_UTR |
| TGATTGTCTACACCATTATA+TGG | 0.294465 | 8_3:-49327579 | Msa1292760:three_prime_UTR |
| CCAAGCTATACATATTGATT+TGG | 0.336982 | 8_3:-49328884 | Msa1292760:CDS |
| CAGAAAAGTGTTTCCGTTAG+TGG | 0.338593 | 8_3:-49328210 | Msa1292760:three_prime_UTR |
| GGTTAACTTGAAAGATTTCC+CGG | 0.363541 | 8_3:-49328236 | Msa1292760:three_prime_UTR |
| CTTAATCAGTTTATTAAGAG+TGG | 0.365489 | 8_3:-49331548 | Msa1292760:CDS |
| AGGAGCGTGCTCGGAGGAGG+GGG | 0.367351 | 8_3:-49328093 | Msa1292760:three_prime_UTR |
| ATTATATCAACCTGCTCTTA+AGG | 0.369801 | 8_3:-49331468 | Msa1292760:intron |
| ATATAGCCTCAAGCAACTTC+AGG | 0.377618 | 8_3:+49327723 | None:intergenic |
| TAAAATCTGCATTTCGCAAA+TGG | 0.388939 | 8_3:+49328029 | None:intergenic |
| TATTCGAGTTGCAAATGTTT+TGG | 0.390052 | 8_3:-49328164 | Msa1292760:three_prime_UTR |
| GTTGGCAATGGATTGTTTAT+CGG | 0.390754 | 8_3:-49328005 | Msa1292760:three_prime_UTR |
| TTTGGTATTTCAATATTAAG+AGG | 0.397760 | 8_3:-49327634 | Msa1292760:three_prime_UTR |
| CATACAATGTAATTAGAAAC+TGG | 0.399606 | 8_3:+49328362 | None:intergenic |
| AGTCTTTATCATATTCCTCT+TGG | 0.414359 | 8_3:+49328915 | None:intergenic |
| AGAAGGTGCACTTAAGGAAT+TGG | 0.419645 | 8_3:-49328419 | Msa1292760:three_prime_UTR |
| AAGAAATCTGTGGAATCTGC+AGG | 0.431533 | 8_3:-49327854 | Msa1292760:three_prime_UTR |
| CAAAGTATACGAGGTTTATA+GGG | 0.436615 | 8_3:-49328329 | Msa1292760:three_prime_UTR |
| TATATTGAGAAACCATATAA+TGG | 0.439558 | 8_3:+49327567 | None:intergenic |
| CGCGTTTATAAATGGGAAGT+TGG | 0.445756 | 8_3:-49331521 | Msa1292760:CDS |
| TAAAGGAGCGTGCTCGGAGG+AGG | 0.446366 | 8_3:-49328096 | Msa1292760:three_prime_UTR |
| ATAGGGTCTGGCGTTCTCCT+AGG | 0.446594 | 8_3:-49328312 | Msa1292760:three_prime_UTR |
| ATTCTTACACGTATAATGTA+TGG | 0.452805 | 8_3:-49328588 | Msa1292760:three_prime_UTR |
| ACATTATACGTGTAAGAATC+CGG | 0.466552 | 8_3:+49328592 | None:intergenic |
| AGCTTTCATTTCTTGCATGA+TGG | 0.470995 | 8_3:+49328627 | None:intergenic |
| AAGAGGGACGGACGAATCAC+TGG | 0.473387 | 8_3:-49328505 | Msa1292760:three_prime_UTR |
| AAAGGAGCGTGCTCGGAGGA+GGG | 0.478966 | 8_3:-49328095 | Msa1292760:three_prime_UTR |
| TATACGAGGTTTATAGGGTC+TGG | 0.480388 | 8_3:-49328324 | Msa1292760:three_prime_UTR |
| TGATATTTCCGGTGTTGAAA+GGG | 0.481939 | 8_3:-49328542 | Msa1292760:three_prime_UTR |
| GAAGGCAGAAGGTGCACTTA+AGG | 0.485117 | 8_3:-49328425 | Msa1292760:three_prime_UTR |
| GTACCTATTGTCTCAGATGA+TGG | 0.485727 | 8_3:+49327941 | None:intergenic |
| TGGGAAGCGCGTTTATAAAT+GGG | 0.485728 | 8_3:-49331528 | Msa1292760:CDS |
| TGTGGAATCTGCAGGGGAAG+AGG | 0.492605 | 8_3:-49327846 | Msa1292760:three_prime_UTR |
| GTTCCATCATCTGAGACAAT+AGG | 0.495080 | 8_3:-49327944 | Msa1292760:three_prime_UTR |
| ATGATATTTCCGGTGTTGAA+AGG | 0.495451 | 8_3:-49328543 | Msa1292760:three_prime_UTR |
| TTATCGGAAGCAATGTCAAT+TGG | 0.499437 | 8_3:-49327989 | Msa1292760:three_prime_UTR |
| AGTTTCTAATTACATTGTAT+GGG | 0.504578 | 8_3:-49328360 | Msa1292760:three_prime_UTR |
| CCAAATCAATATGTATAGCT+TGG | 0.505400 | 8_3:+49328884 | None:intergenic |
| ATTAGAACTTATGCGGCTGC+TGG | 0.506012 | 8_3:-49327809 | Msa1292760:three_prime_UTR |
| GAGCAAGAGAAGGATGTTGA+TGG | 0.508667 | 8_3:-49327902 | Msa1292760:three_prime_UTR |
| GATAATAACAAAGATAATCA+AGG | 0.510057 | 8_3:+49327535 | None:intergenic |
| AAGGAGCGTGCTCGGAGGAG+GGG | 0.512913 | 8_3:-49328094 | Msa1292760:three_prime_UTR |
| GTAGAGGGAACGGTGAAAAG+TGG | 0.515345 | 8_3:-49327967 | Msa1292760:three_prime_UTR |
| ACGGACGAATCACTGGAGAT+TGG | 0.517783 | 8_3:-49328498 | Msa1292760:three_prime_UTR |
| TATAGCCTCAAGCAACTTCA+GGG | 0.518335 | 8_3:+49327724 | None:intergenic |
| TTCATTTCTTGCATGATGGA+CGG | 0.522700 | 8_3:+49328631 | None:intergenic |
| CGCTTAAGAAGCTGAGACAA+CGG | 0.525030 | 8_3:-49331493 | Msa1292760:CDS |
| TTGTGACTCTATACTAAAGT+AGG | 0.527187 | 8_3:-49328670 | Msa1292760:three_prime_UTR |
| ATGTCTCTGATGCAACGTTA+CGG | 0.528194 | 8_3:-49331674 | Msa1292760:CDS |
| ATATGCAGAATTAGATATGC+TGG | 0.533822 | 8_3:-49328134 | Msa1292760:three_prime_UTR |
| GAGACATTGTTGCTCAGTGA+TGG | 0.534809 | 8_3:+49331690 | None:intergenic |
| GGAGAAGGCTGAAGAACTAA+AGG | 0.536610 | 8_3:-49328113 | Msa1292760:three_prime_UTR |
| AGAAAAGTGTTTCCGTTAGT+GGG | 0.536748 | 8_3:-49328209 | Msa1292760:three_prime_UTR |
| AAGAACTAAAGGAGCGTGCT+CGG | 0.537452 | 8_3:-49328102 | Msa1292760:three_prime_UTR |
| GGGTTATTGATGAGATGAAG+AGG | 0.539631 | 8_3:-49328522 | Msa1292760:three_prime_UTR |
| ATCAATAACCCTTTCAACAC+CGG | 0.544306 | 8_3:+49328534 | None:intergenic |
| TTAATCAGTTTATTAAGAGT+GGG | 0.552756 | 8_3:-49331547 | Msa1292760:CDS |
| CACTTAAGGAATTGGAAAAG+AGG | 0.555566 | 8_3:-49328411 | Msa1292760:three_prime_UTR |
| GAAGCAATGTCAATTGGTAG+AGG | 0.559094 | 8_3:-49327983 | Msa1292760:three_prime_UTR |
| GGTTATTGATGAGATGAAGA+GGG | 0.563994 | 8_3:-49328521 | Msa1292760:three_prime_UTR |
| ATCATTGATTAGAACTTATG+CGG | 0.564943 | 8_3:-49327816 | Msa1292760:three_prime_UTR |
| AAGGAATTGGAAAAGAGGAA+TGG | 0.570113 | 8_3:-49328406 | Msa1292760:three_prime_UTR |
| GGTCTGGCGTTCTCCTAGGT+TGG | 0.570656 | 8_3:-49328308 | Msa1292760:three_prime_UTR |
| GACAATCATTCAGAAGGAGA+TGG | 0.571037 | 8_3:+49327594 | None:intergenic |
| GGAGCGTGCTCGGAGGAGGG+GGG | 0.575173 | 8_3:-49328092 | Msa1292760:three_prime_UTR |
| AGAATTAGATATGCTGGAGA+AGG | 0.575282 | 8_3:-49328128 | Msa1292760:three_prime_UTR |
| GAACTTATGCGGCTGCTGGT+AGG | 0.578729 | 8_3:-49327805 | Msa1292760:three_prime_UTR |
| TACTTGAAACTCTTCAAAGA+CGG | 0.580431 | 8_3:-49331599 | Msa1292760:CDS |
| AACTTGTTTGAGAAGGCAGA+AGG | 0.582161 | 8_3:-49328436 | Msa1292760:three_prime_UTR |
| CGAAATCTTGAAGAAATCTG+TGG | 0.586042 | 8_3:-49327864 | Msa1292760:three_prime_UTR |
| TATGCAACGACGATTGAAGA+TGG | 0.587542 | 8_3:-49327771 | Msa1292760:three_prime_UTR |
| ATGTCAATTGGTAGAGGGAA+CGG | 0.588480 | 8_3:-49327977 | Msa1292760:three_prime_UTR |
| GAAAGCTAGCAATATCATGC+CGG | 0.596625 | 8_3:-49328611 | Msa1292760:three_prime_UTR |
| GGTATTTCAATATTAAGAGG+TGG | 0.598990 | 8_3:-49327631 | Msa1292760:three_prime_UTR |
| AATTTACATGAATCACTCCT+CGG | 0.599378 | 8_3:+49327700 | None:intergenic |
| ACATTGTTGCTCAGTGATGG+AGG | 0.605992 | 8_3:+49331693 | None:intergenic |
| GGTGTAGACAATCATTCAGA+AGG | 0.606012 | 8_3:+49327588 | None:intergenic |
| TGCAGCTTGATTCCCACTAA+CGG | 0.606383 | 8_3:+49328197 | None:intergenic |
| CATCAACATAAATAGATGCA+AGG | 0.609623 | 8_3:+49328461 | None:intergenic |
| AGAAATCTGTGGAATCTGCA+GGG | 0.614011 | 8_3:-49327853 | Msa1292760:three_prime_UTR |
| TAGAGGGAACGGTGAAAAGT+GGG | 0.618228 | 8_3:-49327966 | Msa1292760:three_prime_UTR |
| TTGAAACTCTTCAAAGACGG+TGG | 0.620058 | 8_3:-49331596 | Msa1292760:CDS |
| AGATTCCCTGAAGTTGCTTG+AGG | 0.620494 | 8_3:-49327729 | Msa1292760:three_prime_UTR |
| AAGCAATGTCAATTGGTAGA+GGG | 0.624857 | 8_3:-49327982 | Msa1292760:three_prime_UTR |
| GATTTGGATGCAAAAGCTAG+AGG | 0.625939 | 8_3:-49328868 | Msa1292760:CDS |
| GAAGCACTACGAGCAAGAGA+AGG | 0.634627 | 8_3:-49327912 | Msa1292760:three_prime_UTR |
| TGATGCTAACTTGTTTGAGA+AGG | 0.634964 | 8_3:-49328443 | Msa1292760:three_prime_UTR |
| TTATAAGACAGTGAACTCAA+AGG | 0.644951 | 8_3:+49328698 | None:intergenic |
| GTTAACTTGAAAGATTTCCC+GGG | 0.645783 | 8_3:-49328235 | Msa1292760:three_prime_UTR |
| ACTTCTCAACTGCTACTGCA+AGG | 0.646187 | 8_3:-49328778 | Msa1292760:CDS |
| ATTGATGAGATGAAGAGGGA+CGG | 0.662413 | 8_3:-49328517 | Msa1292760:three_prime_UTR |
| TTGATGACTACTAAAGCTGA+AGG | 0.664736 | 8_3:-49328753 | Msa1292760:exon |
| GAAATCTGTGGAATCTGCAG+GGG | 0.667214 | 8_3:-49327852 | Msa1292760:three_prime_UTR |
| TATCAGAAACAACGGCCAAG+AGG | 0.668391 | 8_3:-49328930 | Msa1292760:CDS |
| GTTGCTTGAGGCTATATCCG+AGG | 0.680098 | 8_3:-49327717 | Msa1292760:three_prime_UTR |
| GTTGCAGTTATCAGAAACAA+CGG | 0.684228 | 8_3:-49328938 | Msa1292760:intron |
| AACTAAAGGAGCGTGCTCGG+AGG | 0.698646 | 8_3:-49328099 | Msa1292760:three_prime_UTR |
| GAAAATAGGCAAAGTATACG+AGG | 0.724011 | 8_3:-49328338 | Msa1292760:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAAATAAGATTATATAT+TGG | - | chr8_3:49327860-49327879 | Msa1292760:three_prime_UTR | 10.0% |
| !! | AATGTATTATTTAAATTGAA+AGG | + | chr8_3:49330151-49330170 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAATCAC+GGG | + | chr8_3:49331740-49331759 | None:intergenic | 10.0% |
| !!! | AATTGTTTTTACAAAACTTA+TGG | - | chr8_3:49328089-49328108 | Msa1292760:three_prime_UTR | 15.0% |
| !! | CATATAAACTTATCATATAA+GGG | - | chr8_3:49328381-49328400 | Msa1292760:three_prime_UTR | 15.0% |
| !!! | ATTTTCAACTTATTTTCATA+AGG | + | chr8_3:49328497-49328516 | None:intergenic | 15.0% |
| !! | AATATAATGATATATTAGCT+TGG | - | chr8_3:49328767-49328786 | Msa1292760:CDS | 15.0% |
| !!! | ATATAATGATATATTAGCTT+GGG | - | chr8_3:49328768-49328787 | Msa1292760:CDS | 15.0% |
| !!! | AAAAACTAACTTTATTTAAC+CGG | + | chr8_3:49329297-49329316 | None:intergenic | 15.0% |
| !!! | TAAATAAAGTTAGTTTTTTC+TGG | - | chr8_3:49329299-49329318 | Msa1292760:intron | 15.0% |
| !! | AAAAAAAAAAAAAAATCACG+GGG | + | chr8_3:49331739-49331758 | None:intergenic | 15.0% |
| !! | TTAATCAGTTTATTAAGAGT+GGG | - | chr8_3:49327694-49327713 | Msa1292760:three_prime_UTR | 20.0% |
| !!! | AATAAGATTATATATTGGCT+TGG | - | chr8_3:49327865-49327884 | Msa1292760:three_prime_UTR | 20.0% |
| !! | CATATGTATAATATTACGTA+AGG | - | chr8_3:49328035-49328054 | Msa1292760:three_prime_UTR | 20.0% |
| !! | AAATGCTTATGATAAGAATT+TGG | - | chr8_3:49328272-49328291 | Msa1292760:three_prime_UTR | 20.0% |
| !! | GCATATAAACTTATCATATA+AGG | - | chr8_3:49328380-49328399 | Msa1292760:three_prime_UTR | 20.0% |
| !!! | AAAGTCAATTGTTTTAATGT+AGG | - | chr8_3:49328440-49328459 | Msa1292760:three_prime_UTR | 20.0% |
| !! | GAATGAAGTTATTTATATCA+TGG | - | chr8_3:49328795-49328814 | Msa1292760:CDS | 20.0% |
| !!! | GCCAGTTAATTTTTTTTTTT+TGG | - | chr8_3:49328899-49328918 | Msa1292760:CDS | 20.0% |
| !! | GCCAAAAAAAAAAAATTAAC+TGG | + | chr8_3:49328903-49328922 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTTTTTTGGCTG+TGG | - | chr8_3:49328905-49328924 | Msa1292760:CDS | 20.0% |
| !!! | CATCAATTAATTTTTTGACA+TGG | + | chr8_3:49329859-49329878 | None:intergenic | 20.0% |
| !! | TACTTCAAAAACTCATTATA+TGG | + | chr8_3:49329936-49329955 | None:intergenic | 20.0% |
| !! | TTCTTTATGAATTATGAATG+TGG | - | chr8_3:49330011-49330030 | Msa1292760:intron | 20.0% |
| !! | TTGTCCATGAATATAAATTA+TGG | + | chr8_3:49330268-49330287 | None:intergenic | 20.0% |
| !! | AGTTTCTAATTACATTGTAT+GGG | - | chr8_3:49330881-49330900 | Msa1292760:intron | 20.0% |
| !!! | AAAAACTTGGGAAATATTTT+TGG | - | chr8_3:49331185-49331204 | Msa1292760:intron | 20.0% |
| !! | TTTGGTATTTCAATATTAAG+AGG | - | chr8_3:49331607-49331626 | Msa1292760:CDS | 20.0% |
| !! | TATATTGAGAAACCATATAA+TGG | + | chr8_3:49331677-49331696 | None:intergenic | 20.0% |
| !! | GATAATAACAAAGATAATCA+AGG | + | chr8_3:49331709-49331728 | None:intergenic | 20.0% |
| ! | CTTAATCAGTTTATTAAGAG+TGG | - | chr8_3:49327693-49327712 | Msa1292760:three_prime_UTR | 25.0% |
| !!! | TTGTTACTACTTGTTTTTTC+TGG | - | chr8_3:49327907-49327926 | Msa1292760:three_prime_UTR | 25.0% |
| !!! | GTTAGTGTTGTTATTGATTT+AGG | - | chr8_3:49327950-49327969 | Msa1292760:three_prime_UTR | 25.0% |
| !!! | TTATTGATTTAGGTTCTGTT+TGG | - | chr8_3:49327960-49327979 | Msa1292760:three_prime_UTR | 25.0% |
| ! | AAGTTAATGAAGAATGTCAT+AGG | - | chr8_3:49328127-49328146 | Msa1292760:three_prime_UTR | 25.0% |
| ! | GCTATATCTATATGTTTCTT+AGG | - | chr8_3:49328320-49328339 | Msa1292760:three_prime_UTR | 25.0% |
| ! | CCTAGAAAATACTAGTAATT+TGG | + | chr8_3:49328713-49328732 | None:intergenic | 25.0% |
| !! | CCAAATTACTAGTATTTTCT+AGG | - | chr8_3:49328710-49328729 | Msa1292760:three_prime_UTR | 25.0% |
| ! | TATCATGGAATCATAAAATG+AGG | - | chr8_3:49328810-49328829 | Msa1292760:CDS | 25.0% |
| !! | TATTAGTTTCAACCTTTGTT+AGG | - | chr8_3:49328841-49328860 | Msa1292760:CDS | 25.0% |
| !! | GAAGAGAAAATAATTAGCTT+TGG | - | chr8_3:49329572-49329591 | Msa1292760:intron | 25.0% |
| !!! | AGTCTTGGTTATTTTTCTTT+GGG | - | chr8_3:49329774-49329793 | Msa1292760:intron | 25.0% |
| ! | AATTTAATAAAACGACTCAC+AGG | + | chr8_3:49329833-49329852 | None:intergenic | 25.0% |
| ! | CGTTCCATAATTTATATTCA+TGG | - | chr8_3:49330261-49330280 | Msa1292760:intron | 25.0% |
| ! | ATTCTTACACGTATAATGTA+TGG | - | chr8_3:49330653-49330672 | Msa1292760:intron | 25.0% |
| ! | CATACAATGTAATTAGAAAC+TGG | + | chr8_3:49330882-49330901 | None:intergenic | 25.0% |
| ! | CAGTTTCTAATTACATTGTA+TGG | - | chr8_3:49330880-49330899 | Msa1292760:intron | 25.0% |
| ! | ATTACATTGTATGGGAAAAT+AGG | - | chr8_3:49330889-49330908 | Msa1292760:intron | 25.0% |
| !! | ATCATTGATTAGAACTTATG+CGG | - | chr8_3:49331425-49331444 | Msa1292760:intron | 25.0% |
| ! | TCTGTGTTGCAATAAAAATT+TGG | - | chr8_3:49331589-49331608 | Msa1292760:CDS | 25.0% |
| TACTTGAAACTCTTCAAAGA+CGG | - | chr8_3:49327642-49327661 | Msa1292760:three_prime_UTR | 30.0% | |
| ATTATATCAACCTGCTCTTA+AGG | - | chr8_3:49327773-49327792 | Msa1292760:three_prime_UTR | 30.0% | |
| !!! | TTTTTTCTGGATGTGAAACT+GGG | - | chr8_3:49327920-49327939 | Msa1292760:three_prime_UTR | 30.0% |
| CATAAACTACAACTCACTAA+GGG | + | chr8_3:49328231-49328250 | None:intergenic | 30.0% | |
| TCATAAACTACAACTCACTA+AGG | + | chr8_3:49328232-49328251 | None:intergenic | 30.0% | |
| GAGTTTATAGAAATCGCTTA+TGG | + | chr8_3:49328534-49328553 | None:intergenic | 30.0% | |
| ! | ATGATATATTAGCTTGGGTT+TGG | - | chr8_3:49328773-49328792 | Msa1292760:CDS | 30.0% |
| AGCCTTTGGTTATTAATATC+AGG | - | chr8_3:49328931-49328950 | Msa1292760:CDS | 30.0% | |
| CACCTGATATTAATAACCAA+AGG | + | chr8_3:49328936-49328955 | None:intergenic | 30.0% | |
| CTTTGGTTATTAATATCAGG+TGG | - | chr8_3:49328934-49328953 | Msa1292760:CDS | 30.0% | |
| !! | GTTTTGTTGTCTTTTGCAAT+TGG | - | chr8_3:49328962-49328981 | Msa1292760:intron | 30.0% |
| ! | TCTTTTGCAATTGGTATAGT+GGG | - | chr8_3:49328971-49328990 | Msa1292760:intron | 30.0% |
| !! | TATATCTACTCTAGAGTTAC+TGG | + | chr8_3:49329427-49329446 | None:intergenic | 30.0% |
| !!! | GAGTCTTGGTTATTTTTCTT+TGG | - | chr8_3:49329773-49329792 | Msa1292760:intron | 30.0% |
| !!! | GTTATTTTTCTTTGGGTTCA+TGG | - | chr8_3:49329781-49329800 | Msa1292760:intron | 30.0% |
| TCAAATGCAGTGGTTTATAA+AGG | - | chr8_3:49330039-49330058 | Msa1292760:intron | 30.0% | |
| ! | TGTTGATGTTGTTGACTATA+TGG | - | chr8_3:49330179-49330198 | Msa1292760:intron | 30.0% |
| ATTTAGAGATTATACGTAGC+AGG | - | chr8_3:49330233-49330252 | Msa1292760:intron | 30.0% | |
| AGTCTTTATCATATTCCTCT+TGG | + | chr8_3:49330329-49330348 | None:intergenic | 30.0% | |
| CCAAATCAATATGTATAGCT+TGG | + | chr8_3:49330360-49330379 | None:intergenic | 30.0% | |
| ! | CCAAGCTATACATATTGATT+TGG | - | chr8_3:49330357-49330376 | Msa1292760:intron | 30.0% |
| !! | GGTGTCATTGAAAAAAATGA+AGG | - | chr8_3:49330509-49330528 | Msa1292760:intron | 30.0% |
| TTATAAGACAGTGAACTCAA+AGG | + | chr8_3:49330546-49330565 | None:intergenic | 30.0% | |
| TTGTGACTCTATACTAAAGT+AGG | - | chr8_3:49330571-49330590 | Msa1292760:intron | 30.0% | |
| ACATTATACGTGTAAGAATC+CGG | + | chr8_3:49330652-49330671 | None:intergenic | 30.0% | |
| CATCAACATAAATAGATGCA+AGG | + | chr8_3:49330783-49330802 | None:intergenic | 30.0% | |
| CAAAGTATACGAGGTTTATA+GGG | - | chr8_3:49330912-49330931 | Msa1292760:intron | 30.0% | |
| ! | TAGCTTATGTTTGCAGTTTT+AGG | + | chr8_3:49330964-49330983 | None:intergenic | 30.0% |
| AAGCTATCTGAATATGATTC+AGG | - | chr8_3:49330978-49330997 | Msa1292760:intron | 30.0% | |
| !! | TCTGAATATGATTCAGGTTT+TGG | - | chr8_3:49330984-49331003 | Msa1292760:intron | 30.0% |
| !!! | TATTCGAGTTGCAAATGTTT+TGG | - | chr8_3:49331077-49331096 | Msa1292760:intron | 30.0% |
| ATATGCAGAATTAGATATGC+TGG | - | chr8_3:49331107-49331126 | Msa1292760:intron | 30.0% | |
| ! | ATTTCCCAAGTTTTTGCATT+AGG | + | chr8_3:49331180-49331199 | None:intergenic | 30.0% |
| TAAAATCTGCATTTCGCAAA+TGG | + | chr8_3:49331215-49331234 | None:intergenic | 30.0% | |
| AATTTACATGAATCACTCCT+CGG | + | chr8_3:49331544-49331563 | None:intergenic | 30.0% | |
| GGTATTTCAATATTAAGAGG+TGG | - | chr8_3:49331610-49331629 | Msa1292760:CDS | 30.0% | |
| TGATTGTCTACACCATTATA+TGG | - | chr8_3:49331662-49331681 | Msa1292760:CDS | 30.0% | |
| AAAAAAAAAAAATCACGGGG+TGG | + | chr8_3:49331736-49331755 | None:intergenic | 30.0% | |
| TGCAAAAATACCTTAAGAGC+AGG | + | chr8_3:49327786-49327805 | None:intergenic | 35.0% | |
| !!! | TGCATTTAAGCGCTTTTTCT+AGG | - | chr8_3:49327802-49327821 | Msa1292760:three_prime_UTR | 35.0% |
| !!! | GTTTTTTCTGGATGTGAAAC+TGG | - | chr8_3:49327919-49327938 | Msa1292760:three_prime_UTR | 35.0% |
| !! | AGGCTATAAGCTGTTTTCAT+AGG | - | chr8_3:49328460-49328479 | Msa1292760:three_prime_UTR | 35.0% |
| ! | GTTTTTCTGCGTAATTTAGC+AGG | - | chr8_3:49328877-49328896 | Msa1292760:CDS | 35.0% |
| TGGTTATTAATATCAGGTGG+TGG | - | chr8_3:49328937-49328956 | Msa1292760:intron | 35.0% | |
| GGTTATTAATATCAGGTGGT+GGG | - | chr8_3:49328938-49328957 | Msa1292760:intron | 35.0% | |
| ! | GTCTTTTGCAATTGGTATAG+TGG | - | chr8_3:49328970-49328989 | Msa1292760:intron | 35.0% |
| GATATTTGCCATAGGTAACT+GGG | - | chr8_3:49329009-49329028 | Msa1292760:intron | 35.0% | |
| ! | TTTTACATCCCCTTCATAAG+TGG | - | chr8_3:49329044-49329063 | Msa1292760:intron | 35.0% |
| AACGTATTCTGTAGATCTTG+AGG | - | chr8_3:49329142-49329161 | Msa1292760:intron | 35.0% | |
| CTCTATTATTGTACCCTCAT+CGG | + | chr8_3:49329553-49329572 | None:intergenic | 35.0% | |
| !!! | GTGGATTTGTGCTTGTTTTA+AGG | - | chr8_3:49329669-49329688 | Msa1292760:intron | 35.0% |
| !!! | GATTTGTGCTTGTTTTAAGG+AGG | - | chr8_3:49329672-49329691 | Msa1292760:intron | 35.0% |
| TGGTTTATAAAGGAGTGAGA+TGG | - | chr8_3:49330049-49330068 | Msa1292760:intron | 35.0% | |
| GTTGCAGTTATCAGAAACAA+CGG | - | chr8_3:49330303-49330322 | Msa1292760:intron | 35.0% | |
| !! | ACAGATGATTTTTCAGACTC+GGG | + | chr8_3:49330433-49330452 | None:intergenic | 35.0% |
| !! | CACAGATGATTTTTCAGACT+CGG | + | chr8_3:49330434-49330453 | None:intergenic | 35.0% |
| CTGAAAAATCATCTGTGCTA+TGG | - | chr8_3:49330437-49330456 | Msa1292760:intron | 35.0% | |
| ! | TTGATGACTACTAAAGCTGA+AGG | - | chr8_3:49330488-49330507 | Msa1292760:intron | 35.0% |
| ! | TTCATTTCTTGCATGATGGA+CGG | + | chr8_3:49330613-49330632 | None:intergenic | 35.0% |
| AGCTTTCATTTCTTGCATGA+TGG | + | chr8_3:49330617-49330636 | None:intergenic | 35.0% | |
| GCTGCAGTTAATGATATTTC+CGG | - | chr8_3:49330688-49330707 | Msa1292760:intron | 35.0% | |
| ! | ATGATATTTCCGGTGTTGAA+AGG | - | chr8_3:49330698-49330717 | Msa1292760:intron | 35.0% |
| ! | TGATATTTCCGGTGTTGAAA+GGG | - | chr8_3:49330699-49330718 | Msa1292760:intron | 35.0% |
| ATCAATAACCCTTTCAACAC+CGG | + | chr8_3:49330710-49330729 | None:intergenic | 35.0% | |
| GGTTATTGATGAGATGAAGA+GGG | - | chr8_3:49330720-49330739 | Msa1292760:intron | 35.0% | |
| !! | TGATGCTAACTTGTTTGAGA+AGG | - | chr8_3:49330798-49330817 | Msa1292760:intron | 35.0% |
| CACTTAAGGAATTGGAAAAG+AGG | - | chr8_3:49330830-49330849 | Msa1292760:intron | 35.0% | |
| AAGGAATTGGAAAAGAGGAA+TGG | - | chr8_3:49330835-49330854 | Msa1292760:intron | 35.0% | |
| GAAAATAGGCAAAGTATACG+AGG | - | chr8_3:49330903-49330922 | Msa1292760:intron | 35.0% | |
| GCAAAGTATACGAGGTTTAT+AGG | - | chr8_3:49330911-49330930 | Msa1292760:intron | 35.0% | |
| ! | GGTTAACTTGAAAGATTTCC+CGG | - | chr8_3:49331005-49331024 | Msa1292760:intron | 35.0% |
| ! | GTTAACTTGAAAGATTTCCC+GGG | - | chr8_3:49331006-49331025 | Msa1292760:intron | 35.0% |
| !! | AGAAAAGTGTTTCCGTTAGT+GGG | - | chr8_3:49331032-49331051 | Msa1292760:intron | 35.0% |
| !!! | GAGTTGCAAATGTTTTGGTT+GGG | - | chr8_3:49331082-49331101 | Msa1292760:intron | 35.0% |
| !!! | AGTTGCAAATGTTTTGGTTG+GGG | - | chr8_3:49331083-49331102 | Msa1292760:intron | 35.0% |
| AGAATTAGATATGCTGGAGA+AGG | - | chr8_3:49331113-49331132 | Msa1292760:intron | 35.0% | |
| CAAGCCTAATGCAAAAACTT+GGG | - | chr8_3:49331173-49331192 | Msa1292760:intron | 35.0% | |
| !! | GCGAAATGCAGATTTTAAGT+TGG | - | chr8_3:49331218-49331237 | Msa1292760:intron | 35.0% |
| !!! | TGCAGATTTTAAGTTGGCAA+TGG | - | chr8_3:49331224-49331243 | Msa1292760:intron | 35.0% |
| !! | GTTGGCAATGGATTGTTTAT+CGG | - | chr8_3:49331236-49331255 | Msa1292760:intron | 35.0% |
| TTATCGGAAGCAATGTCAAT+TGG | - | chr8_3:49331252-49331271 | Msa1292760:intron | 35.0% | |
| AAGCAATGTCAATTGGTAGA+GGG | - | chr8_3:49331259-49331278 | Msa1292760:intron | 35.0% | |
| CGAAATCTTGAAGAAATCTG+TGG | - | chr8_3:49331377-49331396 | Msa1292760:intron | 35.0% | |
| ATGTCTCTGATGCAACGTTA+CGG | - | chr8_3:49327567-49327586 | Msa1292760:three_prime_UTR | 40.0% | |
| ! | CGCTTCGTCTAAGTACTTTT+TGG | + | chr8_3:49327619-49327638 | None:intergenic | 40.0% |
| TTGAAACTCTTCAAAGACGG+TGG | - | chr8_3:49327645-49327664 | Msa1292760:three_prime_UTR | 40.0% | |
| ! | TGGGAAGCGCGTTTATAAAT+GGG | - | chr8_3:49327713-49327732 | Msa1292760:three_prime_UTR | 40.0% |
| CGCGTTTATAAATGGGAAGT+TGG | - | chr8_3:49327720-49327739 | Msa1292760:three_prime_UTR | 40.0% | |
| TCAAAGAAGCCAATCCAGAA+GGG | - | chr8_3:49328205-49328224 | Msa1292760:three_prime_UTR | 40.0% | |
| ! | TTTGCAATTGGTATAGTGGG+TGG | - | chr8_3:49328974-49328993 | Msa1292760:intron | 40.0% |
| !! | TTGCAATTGGTATAGTGGGT+GGG | - | chr8_3:49328975-49328994 | Msa1292760:intron | 40.0% |
| AAGCGTAGGATATTTGCCAT+AGG | - | chr8_3:49329001-49329020 | Msa1292760:intron | 40.0% | |
| GGATATTTGCCATAGGTAAC+TGG | - | chr8_3:49329008-49329027 | Msa1292760:intron | 40.0% | |
| GTCATACACCACTTATGAAG+GGG | + | chr8_3:49329055-49329074 | None:intergenic | 40.0% | |
| CGTCATACACCACTTATGAA+GGG | + | chr8_3:49329056-49329075 | None:intergenic | 40.0% | |
| CCTTCATAAGTGGTGTATGA+CGG | - | chr8_3:49329054-49329073 | Msa1292760:intron | 40.0% | |
| TAGATCTTGAGGAAAGCAGA+CGG | - | chr8_3:49329153-49329172 | Msa1292760:intron | 40.0% | |
| AGTGCATCCAATAAGATACC+AGG | + | chr8_3:49329202-49329221 | None:intergenic | 40.0% | |
| TGGTATCTTATTGGATGCAC+TGG | - | chr8_3:49329201-49329220 | Msa1292760:intron | 40.0% | |
| ! | GAATCCGTTGCTATTGTACT+TGG | - | chr8_3:49329326-49329345 | Msa1292760:intron | 40.0% |
| CTTGCCAAGTACAATAGCAA+CGG | + | chr8_3:49329333-49329352 | None:intergenic | 40.0% | |
| GTCTTCTTAGTCTGCTTGAA+AGG | - | chr8_3:49329397-49329416 | Msa1292760:intron | 40.0% | |
| TATTATCCTTCAGTCACTCC+AGG | - | chr8_3:49329611-49329630 | Msa1292760:intron | 40.0% | |
| CTCTAGCTACAAAGCCAAAT+CGG | + | chr8_3:49329747-49329766 | None:intergenic | 40.0% | |
| ! | TCTCTAAATCTAGAGCTGCA+TGG | + | chr8_3:49330222-49330241 | None:intergenic | 40.0% |
| GATTTGGATGCAAAAGCTAG+AGG | - | chr8_3:49330373-49330392 | Msa1292760:intron | 40.0% | |
| !! | CAGATGATTTTTCAGACTCG+GGG | + | chr8_3:49330432-49330451 | None:intergenic | 40.0% |
| !!! | ATGATGGACGGAATCTTTTC+TGG | + | chr8_3:49330601-49330620 | None:intergenic | 40.0% |
| GAAAGCTAGCAATATCATGC+CGG | - | chr8_3:49330630-49330649 | Msa1292760:intron | 40.0% | |
| GGGTTATTGATGAGATGAAG+AGG | - | chr8_3:49330719-49330738 | Msa1292760:intron | 40.0% | |
| ATTGATGAGATGAAGAGGGA+CGG | - | chr8_3:49330724-49330743 | Msa1292760:intron | 40.0% | |
| ! | AACTTGTTTGAGAAGGCAGA+AGG | - | chr8_3:49330805-49330824 | Msa1292760:intron | 40.0% |
| ! | AGAAGGTGCACTTAAGGAAT+TGG | - | chr8_3:49330822-49330841 | Msa1292760:intron | 40.0% |
| TATACGAGGTTTATAGGGTC+TGG | - | chr8_3:49330917-49330936 | Msa1292760:intron | 40.0% | |
| !!! | GTTTTAGGAAATGCCAACCT+AGG | + | chr8_3:49330949-49330968 | None:intergenic | 40.0% |
| !! | CAGAAAAGTGTTTCCGTTAG+TGG | - | chr8_3:49331031-49331050 | Msa1292760:intron | 40.0% |
| !!! | CGAGTTGCAAATGTTTTGGT+TGG | - | chr8_3:49331081-49331100 | Msa1292760:intron | 40.0% |
| ! | CCAAGTTTTTGCATTAGGCT+TGG | + | chr8_3:49331175-49331194 | None:intergenic | 40.0% |
| CCAAGCCTAATGCAAAAACT+TGG | - | chr8_3:49331172-49331191 | Msa1292760:intron | 40.0% | |
| GAAGCAATGTCAATTGGTAG+AGG | - | chr8_3:49331258-49331277 | Msa1292760:intron | 40.0% | |
| ATGTCAATTGGTAGAGGGAA+CGG | - | chr8_3:49331264-49331283 | Msa1292760:intron | 40.0% | |
| ! | GTTCCATCATCTGAGACAAT+AGG | - | chr8_3:49331297-49331316 | Msa1292760:intron | 40.0% |
| GTACCTATTGTCTCAGATGA+TGG | + | chr8_3:49331303-49331322 | None:intergenic | 40.0% | |
| AAGAAATCTGTGGAATCTGC+AGG | - | chr8_3:49331387-49331406 | Msa1292760:intron | 40.0% | |
| AGAAATCTGTGGAATCTGCA+GGG | - | chr8_3:49331388-49331407 | Msa1292760:intron | 40.0% | |
| TATGCAACGACGATTGAAGA+TGG | - | chr8_3:49331470-49331489 | Msa1292760:CDS | 40.0% | |
| TATAGCCTCAAGCAACTTCA+GGG | + | chr8_3:49331520-49331539 | None:intergenic | 40.0% | |
| ATATAGCCTCAAGCAACTTC+AGG | + | chr8_3:49331521-49331540 | None:intergenic | 40.0% | |
| GACAATCATTCAGAAGGAGA+TGG | + | chr8_3:49331650-49331669 | None:intergenic | 40.0% | |
| GGTGTAGACAATCATTCAGA+AGG | + | chr8_3:49331656-49331675 | None:intergenic | 40.0% | |
| ACATTGTTGCTCAGTGATGG+AGG | + | chr8_3:49327551-49327570 | None:intergenic | 45.0% | |
| GAGACATTGTTGCTCAGTGA+TGG | + | chr8_3:49327554-49327573 | None:intergenic | 45.0% | |
| ! | GTGGGAAGCGCGTTTATAAA+TGG | - | chr8_3:49327712-49327731 | Msa1292760:three_prime_UTR | 45.0% |
| CGCTTAAGAAGCTGAGACAA+CGG | - | chr8_3:49327748-49327767 | Msa1292760:three_prime_UTR | 45.0% | |
| CTCAAAGAAGCCAATCCAGA+AGG | - | chr8_3:49328204-49328223 | Msa1292760:three_prime_UTR | 45.0% | |
| AAGTCAATCCCAAACCCACT+TGG | - | chr8_3:49328588-49328607 | Msa1292760:three_prime_UTR | 45.0% | |
| AGTCAATCCCAAACCCACTT+GGG | - | chr8_3:49328589-49328608 | Msa1292760:three_prime_UTR | 45.0% | |
| CCAAATTAGCCCACCGAAAT+TGG | + | chr8_3:49328665-49328684 | None:intergenic | 45.0% | |
| !! | CCAATTTCGGTGGGCTAATT+TGG | - | chr8_3:49328662-49328681 | Msa1292760:three_prime_UTR | 45.0% |
| GTTTCAACCTTTGTTAGGCG+AGG | - | chr8_3:49328846-49328865 | Msa1292760:CDS | 45.0% | |
| CAGTTTACCTCGCCTAACAA+AGG | + | chr8_3:49328856-49328875 | None:intergenic | 45.0% | |
| TTTGGCTGTGGAATAGCCTT+TGG | - | chr8_3:49328917-49328936 | Msa1292760:CDS | 45.0% | |
| !! | TGCAATTGGTATAGTGGGTG+GGG | - | chr8_3:49328976-49328995 | Msa1292760:intron | 45.0% |
| TGAAGGGGATGTAAAACACG+CGG | + | chr8_3:49329040-49329059 | None:intergenic | 45.0% | |
| CCGTCATACACCACTTATGA+AGG | + | chr8_3:49329057-49329076 | None:intergenic | 45.0% | |
| TGTCGACACTCCATATGGAT+GGG | - | chr8_3:49329080-49329099 | Msa1292760:intron | 45.0% | |
| GGTTGAAAGTCCCATCCATA+TGG | + | chr8_3:49329093-49329112 | None:intergenic | 45.0% | |
| TTATAGATGAGCCGTTCCAC+CGG | + | chr8_3:49329124-49329143 | None:intergenic | 45.0% | |
| AGATCTTGAGGAAAGCAGAC+GGG | - | chr8_3:49329154-49329173 | Msa1292760:intron | 45.0% | |
| CAATCAATAAGCTTCCTGCC+TGG | - | chr8_3:49329181-49329200 | Msa1292760:intron | 45.0% | |
| CTTCCTGCCTGGTATCTTAT+TGG | - | chr8_3:49329192-49329211 | Msa1292760:intron | 45.0% | |
| CATCCAATAAGATACCAGGC+AGG | + | chr8_3:49329198-49329217 | None:intergenic | 45.0% | |
| TACCAGACTATGAGATAGCC+TGG | + | chr8_3:49329227-49329246 | None:intergenic | 45.0% | |
| GTCTACCTGATTCAGTCTAC+TGG | + | chr8_3:49329257-49329276 | None:intergenic | 45.0% | |
| AGCTACGACTTCTTCCTTCT+GGG | + | chr8_3:49329360-49329379 | None:intergenic | 45.0% | |
| AAGCTCAAGCTCAAAGCTAC+TGG | + | chr8_3:49329476-49329495 | None:intergenic | 45.0% | |
| TCCACATAACCACACTAGCA+CGG | + | chr8_3:49329654-49329673 | None:intergenic | 45.0% | |
| !!! | TGTCTGTTTTTGGCCTTTCG+TGG | - | chr8_3:49329718-49329737 | Msa1292760:intron | 45.0% |
| !! | AGCTAGAGTGTTGAGAGTCT+TGG | - | chr8_3:49329759-49329778 | Msa1292760:intron | 45.0% |
| TGTGGATGCTTCAAATGCAG+TGG | - | chr8_3:49330029-49330048 | Msa1292760:intron | 45.0% | |
| AGGAGTGAGATGGTGAACTT+AGG | - | chr8_3:49330059-49330078 | Msa1292760:intron | 45.0% | |
| TATCAGAAACAACGGCCAAG+AGG | - | chr8_3:49330311-49330330 | Msa1292760:intron | 45.0% | |
| ACTTCTCAACTGCTACTGCA+AGG | - | chr8_3:49330463-49330482 | Msa1292760:intron | 45.0% | |
| TGCAGCTTGATTCCCACTAA+CGG | + | chr8_3:49331047-49331066 | None:intergenic | 45.0% | |
| GGAGAAGGCTGAAGAACTAA+AGG | - | chr8_3:49331128-49331147 | Msa1292760:intron | 45.0% | |
| ! | AAGAACTAAAGGAGCGTGCT+CGG | - | chr8_3:49331139-49331158 | Msa1292760:intron | 45.0% |
| TAGAGGGAACGGTGAAAAGT+GGG | - | chr8_3:49331275-49331294 | Msa1292760:intron | 45.0% | |
| GAGCAAGAGAAGGATGTTGA+TGG | - | chr8_3:49331339-49331358 | Msa1292760:intron | 45.0% | |
| GAAATCTGTGGAATCTGCAG+GGG | - | chr8_3:49331389-49331408 | Msa1292760:intron | 45.0% | |
| ATTAGAACTTATGCGGCTGC+TGG | - | chr8_3:49331432-49331451 | Msa1292760:intron | 45.0% | |
| AGATTCCCTGAAGTTGCTTG+AGG | - | chr8_3:49331512-49331531 | Msa1292760:CDS | 45.0% | |
| AAAAAAATCACGGGGTGGCA+TGG | + | chr8_3:49331731-49331750 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAAAAATCA+CGG | + | chr8_3:49331741-49331760 | None:intergenic | 5.0% |
| AATCCCAAACCCACTTGGGT+TGG | - | chr8_3:49328593-49328612 | Msa1292760:three_prime_UTR | 50.0% | |
| ! | AAGCCAACCCAAGTGGGTTT+GGG | + | chr8_3:49328599-49328618 | None:intergenic | 50.0% |
| AGTACCAAGCCAACCCAAGT+GGG | + | chr8_3:49328605-49328624 | None:intergenic | 50.0% | |
| GCTTGGTACTCCTCTTCTCA+AGG | - | chr8_3:49328615-49328634 | Msa1292760:three_prime_UTR | 50.0% | |
| ! | ATTCTCCCCGGTGCCAATTT+CGG | - | chr8_3:49328649-49328668 | Msa1292760:three_prime_UTR | 50.0% |
| CGGGATAACCCAGTTACCTA+TGG | + | chr8_3:49329020-49329039 | None:intergenic | 50.0% | |
| GAAGGGGATGTAAAACACGC+GGG | + | chr8_3:49329039-49329058 | None:intergenic | 50.0% | |
| GGTTCTGTCGACACTCCATA+TGG | - | chr8_3:49329075-49329094 | Msa1292760:intron | 50.0% | |
| CTGTCGACACTCCATATGGA+TGG | - | chr8_3:49329079-49329098 | Msa1292760:intron | 50.0% | |
| GACTTTCAACCAAACCGCTC+CGG | - | chr8_3:49329102-49329121 | Msa1292760:intron | 50.0% | |
| GATCTTGAGGAAAGCAGACG+GGG | - | chr8_3:49329155-49329174 | Msa1292760:intron | 50.0% | |
| ! | TCTTATTGGATGCACTGGCC+AGG | - | chr8_3:49329206-49329225 | Msa1292760:intron | 50.0% |
| CACTGCCAGTAGACTGAATC+AGG | - | chr8_3:49329249-49329268 | Msa1292760:intron | 50.0% | |
| ACAGTCAGCTCTCTTACAGC+CGG | - | chr8_3:49329275-49329294 | Msa1292760:intron | 50.0% | |
| ACTTGGCAAGTAAGCCCAGA+AGG | - | chr8_3:49329343-49329362 | Msa1292760:intron | 50.0% | |
| CAGCTACGACTTCTTCCTTC+TGG | + | chr8_3:49329361-49329380 | None:intergenic | 50.0% | |
| ACGCGGATTCAATAGCAGCT+GGG | + | chr8_3:49329521-49329540 | None:intergenic | 50.0% | |
| TACGCGGATTCAATAGCAGC+TGG | + | chr8_3:49329522-49329541 | None:intergenic | 50.0% | |
| GCTGCTATTGAATCCGCGTA+AGG | - | chr8_3:49329522-49329541 | Msa1292760:intron | 50.0% | |
| TTCTCACCTGGAGTGACTGA+AGG | + | chr8_3:49329620-49329639 | None:intergenic | 50.0% | |
| GTCACTCCAGGTGAGAAGTT+CGG | - | chr8_3:49329623-49329642 | Msa1292760:intron | 50.0% | |
| ! | GTTTGATAGTTCCTGCTGCG+TGG | - | chr8_3:49329694-49329713 | Msa1292760:intron | 50.0% |
| AAAACAGACAACCACGCAGC+AGG | + | chr8_3:49329708-49329727 | None:intergenic | 50.0% | |
| ! | GCTGCGTGGTTGTCTGTTTT+TGG | - | chr8_3:49329708-49329727 | Msa1292760:intron | 50.0% |
| GCCTTTCGTGGTTTCCGATT+TGG | - | chr8_3:49329730-49329749 | Msa1292760:intron | 50.0% | |
| GCCAAATCGGAAACCACGAA+AGG | + | chr8_3:49329734-49329753 | None:intergenic | 50.0% | |
| ACGGACGAATCACTGGAGAT+TGG | - | chr8_3:49330743-49330762 | Msa1292760:intron | 50.0% | |
| ! | GAAGGCAGAAGGTGCACTTA+AGG | - | chr8_3:49330816-49330835 | Msa1292760:intron | 50.0% |
| ! | GGAAACACTTTTCTGCTCCC+GGG | + | chr8_3:49331026-49331045 | None:intergenic | 50.0% |
| ! | CGGAAACACTTTTCTGCTCC+CGG | + | chr8_3:49331027-49331046 | None:intergenic | 50.0% |
| GTAGAGGGAACGGTGAAAAG+TGG | - | chr8_3:49331274-49331293 | Msa1292760:intron | 50.0% | |
| ! | GAAGCACTACGAGCAAGAGA+AGG | - | chr8_3:49331329-49331348 | Msa1292760:intron | 50.0% |
| GTTGCTTGAGGCTATATCCG+AGG | - | chr8_3:49331524-49331543 | Msa1292760:CDS | 50.0% | |
| CACTAAGGGCCCTTCTGGAT+TGG | + | chr8_3:49328217-49328236 | None:intergenic | 55.0% | |
| CAACTCACTAAGGGCCCTTC+TGG | + | chr8_3:49328222-49328241 | None:intergenic | 55.0% | |
| ! | CAAGCCAACCCAAGTGGGTT+TGG | + | chr8_3:49328600-49328619 | None:intergenic | 55.0% |
| !! | CAAACCCACTTGGGTTGGCT+TGG | - | chr8_3:49328598-49328617 | Msa1292760:three_prime_UTR | 55.0% |
| GAGTACCAAGCCAACCCAAG+TGG | + | chr8_3:49328606-49328625 | None:intergenic | 55.0% | |
| GCACTCGAGACCTTGAGAAG+AGG | + | chr8_3:49328628-49328647 | None:intergenic | 55.0% | |
| TAGCCCACCGAAATTGGCAC+CGG | + | chr8_3:49328659-49328678 | None:intergenic | 55.0% | |
| TTTCAACCAAACCGCTCCGG+TGG | - | chr8_3:49329105-49329124 | Msa1292760:intron | 55.0% | |
| GGCCAGGCTATCTCATAGTC+TGG | - | chr8_3:49329222-49329241 | Msa1292760:intron | 55.0% | |
| CTAAGAAGACGCCCACGTAG+CGG | + | chr8_3:49329387-49329406 | None:intergenic | 55.0% | |
| CTCATCGGCATCTCCTTACG+CGG | + | chr8_3:49329538-49329557 | None:intergenic | 55.0% | |
| GCGTAAGGAGATGCCGATGA+GGG | - | chr8_3:49329537-49329556 | Msa1292760:intron | 55.0% | |
| GCTTAGCCGAACTTCTCACC+TGG | + | chr8_3:49329632-49329651 | None:intergenic | 55.0% | |
| GCCGTGCTAGTGTGGTTATG+TGG | - | chr8_3:49329650-49329669 | Msa1292760:intron | 55.0% | |
| AAGAGGGACGGACGAATCAC+TGG | - | chr8_3:49330736-49330755 | Msa1292760:intron | 55.0% | |
| ATAGGGTCTGGCGTTCTCCT+AGG | - | chr8_3:49330929-49330948 | Msa1292760:intron | 55.0% | |
| ! | AACTAAAGGAGCGTGCTCGG+AGG | - | chr8_3:49331142-49331161 | Msa1292760:intron | 55.0% |
| TGTGGAATCTGCAGGGGAAG+AGG | - | chr8_3:49331395-49331414 | Msa1292760:intron | 55.0% | |
| GAACTTATGCGGCTGCTGGT+AGG | - | chr8_3:49331436-49331455 | Msa1292760:intron | 55.0% | |
| GTCTCGAGTGCGATTCTCCC+CGG | - | chr8_3:49328637-49328656 | Msa1292760:three_prime_UTR | 60.0% | |
| ! | TCCCCGGTGCCAATTTCGGT+GGG | - | chr8_3:49328653-49328672 | Msa1292760:three_prime_UTR | 60.0% |
| AGCCCACCGAAATTGGCACC+GGG | + | chr8_3:49328658-49328677 | None:intergenic | 60.0% | |
| ! | TAGTGGGTGGGGAGAAGCGT+AGG | - | chr8_3:49328987-49329006 | Msa1292760:intron | 60.0% |
| ACCAAACCGCTCCGGTGGAA+CGG | - | chr8_3:49329110-49329129 | Msa1292760:intron | 60.0% | |
| TCGTAGCTGCTACCGCTACG+TGG | - | chr8_3:49329372-49329391 | Msa1292760:intron | 60.0% | |
| CGTAGCTGCTACCGCTACGT+GGG | - | chr8_3:49329373-49329392 | Msa1292760:intron | 60.0% | |
| CGCGTAAGGAGATGCCGATG+AGG | - | chr8_3:49329536-49329555 | Msa1292760:intron | 60.0% | |
| TCGGCTAAGCCGTGCTAGTG+TGG | - | chr8_3:49329642-49329661 | Msa1292760:intron | 60.0% | |
| GGTCTGGCGTTCTCCTAGGT+TGG | - | chr8_3:49330933-49330952 | Msa1292760:intron | 60.0% | |
| ! | TAAAGGAGCGTGCTCGGAGG+AGG | - | chr8_3:49331145-49331164 | Msa1292760:intron | 60.0% |
| ! | AAAGGAGCGTGCTCGGAGGA+GGG | - | chr8_3:49331146-49331165 | Msa1292760:intron | 60.0% |
| ! | CTCCCCGGTGCCAATTTCGG+TGG | - | chr8_3:49328652-49328671 | Msa1292760:three_prime_UTR | 65.0% |
| GCCCACCGAAATTGGCACCG+GGG | + | chr8_3:49328657-49328676 | None:intergenic | 65.0% | |
| GATGAGCCGTTCCACCGGAG+CGG | + | chr8_3:49329119-49329138 | None:intergenic | 65.0% | |
| ! | AAGGAGCGTGCTCGGAGGAG+GGG | - | chr8_3:49331147-49331166 | Msa1292760:intron | 65.0% |
| GCCGTTCCACCGGAGCGGTT+TGG | + | chr8_3:49329114-49329133 | None:intergenic | 70.0% | |
| ! | AGGAGCGTGCTCGGAGGAGG+GGG | - | chr8_3:49331148-49331167 | Msa1292760:intron | 70.0% |
| GGAGCGTGCTCGGAGGAGGG+GGG | - | chr8_3:49331149-49331168 | Msa1292760:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 49327503 | 49331760 | 49327503 | ID=Msa1292760;Name=Msa1292760 |
| chr8_3 | mRNA | 49327503 | 49331760 | 49327503 | ID=Msa1292760-mRNA-1;Parent=Msa1292760;Name=Msa1292760-mRNA-1;_AED=0.23;_eAED=0.23;_QI=64|1|1|1|0|1|2|1259|139 |
| chr8_3 | exon | 49327503 | 49328953 | 49327503 | ID=Msa1292760-mRNA-1:exon:13697;Parent=Msa1292760-mRNA-1 |
| chr8_3 | exon | 49331469 | 49331760 | 49331469 | ID=Msa1292760-mRNA-1:exon:13696;Parent=Msa1292760-mRNA-1 |
| chr8_3 | five_prime_UTR | 49331697 | 49331760 | 49331697 | ID=Msa1292760-mRNA-1:five_prime_utr;Parent=Msa1292760-mRNA-1 |
| chr8_3 | CDS | 49331469 | 49331696 | 49331469 | ID=Msa1292760-mRNA-1:cds;Parent=Msa1292760-mRNA-1 |
| chr8_3 | CDS | 49328762 | 49328953 | 49328762 | ID=Msa1292760-mRNA-1:cds;Parent=Msa1292760-mRNA-1 |
| chr8_3 | three_prime_UTR | 49327503 | 49328761 | 49327503 | ID=Msa1292760-mRNA-1:three_prime_utr;Parent=Msa1292760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
