AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0173280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173280 MtrunA17_Chr1g0192831 90.000 590 18 3 1 552 1 587 0.0 1028
Msa0173280 MtrunA17_Chr4g0004871 25.833 360 221 10 207 532 133 480 1.78e-17 85.5
Msa0173280 MtrunA17_Chr4g0004881 25.000 356 228 9 207 532 130 476 7.43e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173280 AT5G26820.1 60.202 593 189 7 1 550 7 595 0.0 659
Msa0173280 AT5G03570.2 25.872 344 214 9 212 524 146 479 1.27e-14 77.0
Msa0173280 AT5G03570.1 25.872 344 214 9 212 524 146 479 1.27e-14 77.0
Msa0173280 AT5G03570.4 25.872 344 214 9 212 524 101 434 1.67e-14 76.6

Find 167 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATTGCTCACTATTATT+TGG 0.097948 1_4:+58437566 Msa0173280:three_prime_UTR
GCCTGTAATTCTTCTGTAAA+TGG 0.167514 1_4:+58437355 Msa0173280:three_prime_UTR
CTAATTGTTTCCAACATATT+TGG 0.167752 1_4:-58437276 None:intergenic
GCAGATTACAGGATGAAATT+TGG 0.168385 1_4:-58433775 None:intergenic
GCAAACGATCCTTCTCATTT+TGG 0.171545 1_4:+58436696 Msa0173280:CDS
TGCTCACTATTATTTGGATT+TGG 0.188623 1_4:+58437572 Msa0173280:three_prime_UTR
CTCATAGATAGATAAGATTT+TGG 0.205931 1_4:+58431601 Msa0173280:five_prime_UTR
AAGCTTTGTGGTGTGGCTTT+GGG 0.232750 1_4:+58433380 Msa0173280:CDS
TCGACTCTGGTCAAGCAATT+TGG 0.241089 1_4:+58434892 Msa0173280:CDS
TATCTATGAGAATAAGATTA+TGG 0.243371 1_4:-58431588 None:intergenic
TCCATTTACAGAAGAATTAC+AGG 0.265566 1_4:-58437356 None:intergenic
GAAGCTTTGTGGTGTGGCTT+TGG 0.281406 1_4:+58433379 Msa0173280:CDS
GCTCACTATTATTTGGATTT+GGG 0.287332 1_4:+58437573 Msa0173280:three_prime_UTR
CATAATAAATTGAGTTAGTT+AGG 0.289204 1_4:+58437407 Msa0173280:three_prime_UTR
CTAAACCTTAGAAAAGAATA+AGG 0.297815 1_4:-58437478 None:intergenic
TAAAATCAATACTGATATTC+TGG 0.298842 1_4:+58432151 Msa0173280:CDS
AAATCTCCGGCTTCTGTATC+AGG 0.313726 1_4:-58437319 None:intergenic
GCACACCCTGCTGGGTTATA+TGG 0.319471 1_4:+58432368 Msa0173280:CDS
GCGTCCATGGTTTGTCGTAT+TGG 0.321719 1_4:+58433337 Msa0173280:CDS
CAACAGGTTTGTGACGGTTT+AGG 0.325908 1_4:-58433988 None:intergenic
GCTACTCCGGCACACCCTGC+TGG 0.330733 1_4:+58432359 Msa0173280:CDS
ATGTTTGAATGGATATTATA+CGG 0.332340 1_4:-58431555 None:intergenic
GGTGAAATGGATGAGATTAA+AGG 0.336046 1_4:-58431822 None:intergenic
CACAGCTGACAGGAGTTAAT+AGG 0.336528 1_4:+58433520 Msa0173280:intron
AACAGAGAACTTACTGTAAC+AGG 0.338783 1_4:-58433834 None:intergenic
CCAGGCTGGGGCAGTTGGGT+TGG 0.341613 1_4:+58435022 Msa0173280:intron
TTAATCGGCACAGGACATTC+AGG 0.342423 1_4:-58432131 None:intergenic
ATCTGCTTAAAAGTTGCTTC+TGG 0.348836 1_4:+58433792 Msa0173280:CDS
TACTGATATACAATTGGAAT+TGG 0.354236 1_4:+58432058 Msa0173280:CDS
AGAATTGTGGTAATTCTGAT+AGG 0.357238 1_4:+58437521 Msa0173280:three_prime_UTR
AGAAGTTGCTGTTGCAAGTC+TGG 0.361361 1_4:+58436641 Msa0173280:CDS
GGGGCGCAAATTATCCAAAC+TGG 0.362063 1_4:+58436582 Msa0173280:CDS
GGTGGAAAACCAGTTGTTAA+AGG 0.363257 1_4:+58434124 Msa0173280:intron
TAATACCTCTGAGTGATAGA+AGG 0.365637 1_4:-58431920 None:intergenic
GGGTTGCAAATGAGCGTGAC+TGG 0.367569 1_4:+58433402 Msa0173280:CDS
TTTGTCGTATTGGTTTCAGC+TGG 0.397742 1_4:+58433347 Msa0173280:CDS
ACAAGAAACGAGGACAACTA+TGG 0.398430 1_4:+58431784 Msa0173280:exon
TGAGTTGGACGAAACCTAAC+TGG 0.405581 1_4:+58431730 Msa0173280:five_prime_UTR
TGTGCACTAATATAATATAA+AGG 0.405676 1_4:-58437386 None:intergenic
AACGAATACTGATATACAAT+TGG 0.407578 1_4:+58432052 Msa0173280:CDS
AAGAAACCCACCACAGCAAC+TGG 0.408080 1_4:-58433061 None:intergenic
CTACATTGCTTCTGCGTCCA+TGG 0.410181 1_4:+58433324 Msa0173280:CDS
ATCTATGAGAATAAGATTAT+GGG 0.412735 1_4:-58431587 None:intergenic
TGGATGATGGGATCCCAGTT+TGG 0.424363 1_4:-58436596 None:intergenic
ATAGCTGGAGCATTGCTGTT+TGG 0.430015 1_4:+58433741 Msa0173280:CDS
AGTATTCGTTATCGAACATC+TGG 0.430787 1_4:-58432039 None:intergenic
ATGAGATTTGCTTTGGATGA+TGG 0.434327 1_4:-58436609 None:intergenic
AACATTCGTCTCTTCGACTC+TGG 0.436041 1_4:+58434879 Msa0173280:CDS
AGTTGCTTCTGGCTTAATGA+TGG 0.436477 1_4:+58433803 Msa0173280:CDS
CAGGATGAAATTTGGAAAGA+AGG 0.437395 1_4:-58433767 None:intergenic
CTTCAAGCTGTGGAACTTGA+AGG 0.439189 1_4:-58431757 None:intergenic
TTTGCTTGTGCAAGTGCGAC+TGG 0.446486 1_4:-58433543 None:intergenic
TGATAGAAGGGTAGTAATTG+AGG 0.448102 1_4:-58431907 None:intergenic
TTCATCGAATGATCTGCAAC+AGG 0.457479 1_4:-58434004 None:intergenic
TATTATTTGGATTTGGGTGA+AGG 0.458932 1_4:+58437579 Msa0173280:three_prime_UTR
AGTCCCGATGAGATTTGCTT+TGG 0.459197 1_4:-58436616 None:intergenic
TTGTCGTATTGGTTTCAGCT+GGG 0.460813 1_4:+58433348 Msa0173280:CDS
AAAACCAGTTGTTAAAGGTC+TGG 0.461135 1_4:+58434129 Msa0173280:intron
AAGAAGGAGGAATGGTGAAA+TGG 0.466110 1_4:-58431835 None:intergenic
GGCTTACGTCCATCCATCAT+TGG 0.466674 1_4:+58434817 Msa0173280:intron
AGCTTTGTGGTGTGGCTTTG+GGG 0.469755 1_4:+58433381 Msa0173280:CDS
ATTAAAGTTTCACTCAAGAA+AGG 0.471473 1_4:+58431485 None:intergenic
GCATCAGATGCTGACAGTAT+AGG 0.471700 1_4:+58434033 Msa0173280:CDS
GGGGCTATTGAGAAGCTTTG+TGG 0.472566 1_4:+58433368 Msa0173280:CDS
TTTCTACCGGTGTTCTTGAC+CGG 0.480330 1_4:+58433965 Msa0173280:CDS
AACTTGAAGGAAAACCAGTT+AGG 0.492169 1_4:-58431744 None:intergenic
TGAGATTTGCTTTGGATGAT+GGG 0.493099 1_4:-58436608 None:intergenic
AACGAGGATAAGAGTGAAGG+AGG 0.494157 1_4:+58432089 Msa0173280:CDS
GAGGATAAGAGTGAAGGAGG+AGG 0.494450 1_4:+58432092 Msa0173280:CDS
CACATGTCATATGATGTTGT+AGG 0.494676 1_4:+58436561 Msa0173280:CDS
GGAATAATGTAATGTTTGAA+TGG 0.498362 1_4:-58431566 None:intergenic
TCCGCTAAATCCTCCAATGA+TGG 0.499930 1_4:-58434830 None:intergenic
GGTTTATTTCCACAGCTGAC+AGG 0.500274 1_4:+58433510 Msa0173280:intron
GAAGGTCGATGCGAGAAAGA+AGG 0.503286 1_4:-58431851 None:intergenic
ATTGAGTTAGTTAGGTGTCT+AGG 0.503347 1_4:+58437415 Msa0173280:three_prime_UTR
ACTGAGGATGATAAGAGAAA+AGG 0.503730 1_4:-58436809 None:intergenic
CTACTCCGGCACACCCTGCT+GGG 0.504482 1_4:+58432360 Msa0173280:CDS
TGGAAGCTATCAAGCTCGGC+TGG 0.508035 1_4:+58434149 Msa0173280:CDS
ACATGTCATATGATGTTGTA+GGG 0.508610 1_4:+58436562 Msa0173280:CDS
CATCCAAAGCAAATCTCATC+GGG 0.512204 1_4:+58436613 Msa0173280:CDS
AGGATAAGAGTGAAGGAGGA+GGG 0.515494 1_4:+58432093 Msa0173280:CDS
TCCATCATTGGAGGATTTAG+CGG 0.517695 1_4:+58434829 Msa0173280:CDS
GCAATACTAGCAGGAAGGAC+TGG 0.519217 1_4:-58434190 None:intergenic
TCAAGCTTTATTTCTCAGCA+TGG 0.524182 1_4:+58435049 Msa0173280:CDS
ATCCCACCATATAACCCAGC+AGG 0.525279 1_4:-58432374 None:intergenic
ATATATGTAGTACATATGTA+TGG 0.525903 1_4:+58437689 Msa0173280:three_prime_UTR
GAATTGTGGTAATTCTGATA+GGG 0.526296 1_4:+58437522 Msa0173280:three_prime_UTR
TGCCTTGTTGCAAAGACTGT+TGG 0.526398 1_4:+58437240 Msa0173280:three_prime_UTR
AAGCCTCTTGCCAGTTGCTG+TGG 0.527013 1_4:+58433051 Msa0173280:CDS
TCCTTCCTGCTAGTATTGCG+TGG 0.529013 1_4:+58434194 Msa0173280:CDS
TATTGAGAAGCTTTGTGGTG+TGG 0.529833 1_4:+58433373 Msa0173280:CDS
TGGACAAGAACCAAATATGT+TGG 0.532916 1_4:+58437266 Msa0173280:three_prime_UTR
TTACAATCAGAAACAAGAAA+AGG 0.537721 1_4:-58435121 None:intergenic
GTTGCTTCTGGCTTAATGAT+GGG 0.540232 1_4:+58433804 Msa0173280:CDS
AATGTTGTCTCTTCTATCAG+TGG 0.542189 1_4:+58436728 Msa0173280:CDS
TGAGCGTGACTGGGTTGTGC+TGG 0.542195 1_4:+58433412 Msa0173280:CDS
TATAACCCAGCAGGGTGTGC+CGG 0.542542 1_4:-58432365 None:intergenic
TGAACATTACTCAAAACAAA+GGG 0.547754 1_4:+58431674 Msa0173280:five_prime_UTR
TTGTCTCTTCTATCAGTGGT+TGG 0.547810 1_4:+58436732 Msa0173280:CDS
AACACCGGTAGAAAGCTTGT+TGG 0.548137 1_4:-58433956 None:intergenic
TCTTGTGAAACTTCAAGCTG+TGG 0.549218 1_4:-58431767 None:intergenic
CAGCATGGATGTTCTGCAGA+TGG 0.553425 1_4:+58436757 Msa0173280:CDS
TTAACCAACAAGCTTTCTAC+CGG 0.553650 1_4:+58433952 Msa0173280:CDS
TTCAATATTGTTCTTACACC+AGG 0.554964 1_4:+58434229 Msa0173280:CDS
AGCACCCACGCAATACTAGC+AGG 0.557563 1_4:-58434199 None:intergenic
ACATGTTCTTGCAGCTACTC+CGG 0.558596 1_4:+58432346 Msa0173280:CDS
GTTGCAAAGACTGTTGGATG+TGG 0.559280 1_4:+58437246 Msa0173280:three_prime_UTR
CAAGAGGCTTGAATGAATCA+AGG 0.559351 1_4:-58433038 None:intergenic
CTTTACAAAACGTTTATGCA+TGG 0.559652 1_4:-58437442 None:intergenic
CTTTGCAACAAGGCAGCTAG+TGG 0.560103 1_4:-58437232 None:intergenic
CTCGGCTGGAAAGAGTATCT+AGG 0.560347 1_4:+58434163 Msa0173280:CDS
GCTTTGTGGTGTGGCTTTGG+GGG 0.562182 1_4:+58433382 Msa0173280:CDS
CTGGCAGAGTCTCTAATGCT+TGG 0.562890 1_4:+58436660 Msa0173280:CDS
CTAAATCCTCCAATGATGGA+TGG 0.564029 1_4:-58434826 None:intergenic
CCTTCCTGCTAGTATTGCGT+GGG 0.565115 1_4:+58434195 Msa0173280:CDS
AGAAACAAGAAAAGGAGAAG+AGG 0.569930 1_4:-58435113 None:intergenic
ATTACTCAAAACAAAGGGAA+AGG 0.570265 1_4:+58431679 Msa0173280:five_prime_UTR
TCTAGTAAGACTGCATGAGT+TGG 0.572130 1_4:+58431715 Msa0173280:five_prime_UTR
AGGTTTGTGACGGTTTAGGC+CGG 0.572282 1_4:-58433984 None:intergenic
TGAATCAAGGCAATGGCAGA+AGG 0.572956 1_4:-58433025 None:intergenic
TATCAGTGGTTGGTGCAGCA+TGG 0.573779 1_4:+58436742 Msa0173280:CDS
GAAATGGATGAGATTAAAGG+AGG 0.575293 1_4:-58431819 None:intergenic
TCATCCAAAGCAAATCTCAT+CGG 0.577100 1_4:+58436612 Msa0173280:CDS
TATCCACCTGATACAGAAGC+CGG 0.577688 1_4:+58437313 Msa0173280:three_prime_UTR
ATGCGAGAAAGAAGGAGGAA+TGG 0.580051 1_4:-58431843 None:intergenic
AATGCTGTCATCAAACTGCC+TGG 0.581730 1_4:-58434247 None:intergenic
GGCAGCCACTCAGTTACTAT+CGG 0.582499 1_4:+58433256 Msa0173280:intron
ATGAACATTACTCAAAACAA+AGG 0.582795 1_4:+58431673 Msa0173280:five_prime_UTR
GGTTGCAAATGAGCGTGACT+GGG 0.583770 1_4:+58433403 Msa0173280:CDS
TGTCGTATTGGTTTCAGCTG+GGG 0.584794 1_4:+58433349 Msa0173280:CDS
GGTCTGGAAGCTATCAAGCT+CGG 0.585597 1_4:+58434145 Msa0173280:CDS
CGATAGCGTAATCTCGAAGA+AGG 0.585822 1_4:-58431869 None:intergenic
AATACCTCTGAGTGATAGAA+GGG 0.586952 1_4:-58431919 None:intergenic
GCTAAACATCCAAAATGAGA+AGG 0.588441 1_4:-58436705 None:intergenic
TATGTTGGAAACAATTAGCA+TGG 0.589071 1_4:+58437281 Msa0173280:three_prime_UTR
AATCAATACTGATATTCTGG+TGG 0.598210 1_4:+58432154 Msa0173280:CDS
GAAACCAATACGACAAACCA+TGG 0.610451 1_4:-58433341 None:intergenic
ATCCAACAGTCTTTGCAACA+AGG 0.610593 1_4:-58437242 None:intergenic
AAATGGATGAGATTAAAGGA+GGG 0.610645 1_4:-58431818 None:intergenic
GATCTGCAACAGGTTTGTGA+CGG 0.618049 1_4:-58433994 None:intergenic
GCTTGAATGAATCAAGGCAA+TGG 0.619193 1_4:-58433032 None:intergenic
TCGAATTGATCTGTTATCTG+AGG 0.619996 1_4:+58433578 Msa0173280:CDS
TTACGTCCATCCATCATTGG+AGG 0.622255 1_4:+58434820 Msa0173280:CDS
TCTCCGGCTTCTGTATCAGG+TGG 0.626664 1_4:-58437316 None:intergenic
CCACCACAGCAACTGGCAAG+AGG 0.629861 1_4:-58433054 None:intergenic
ACAGACTTGCTGCAGAATTG+TGG 0.630841 1_4:+58437508 Msa0173280:three_prime_UTR
GGGCGCAAATTATCCAAACT+GGG 0.634115 1_4:+58436583 Msa0173280:CDS
AGCAATGTAGACACTGAAGT+AGG 0.635319 1_4:-58433311 None:intergenic
CCCACGCAATACTAGCAGGA+AGG 0.637832 1_4:-58434195 None:intergenic
GGTCGATGCGAGAAAGAAGG+AGG 0.638044 1_4:-58431848 None:intergenic
GCTGTTGCTGTATATATGAG+TGG 0.644425 1_4:+58435071 Msa0173280:CDS
GTAAACGAGGATAAGAGTGA+AGG 0.646811 1_4:+58432086 Msa0173280:CDS
TTACATAAATATCAAAACTG+AGG 0.653303 1_4:-58436825 None:intergenic
TACATATGTATGGTAAGTTG+TGG 0.655363 1_4:+58437699 Msa0173280:three_prime_UTR
AATGTAGACACTGAAGTAGG+AGG 0.659268 1_4:-58433308 None:intergenic
TTTAGGCCGGTCAAGAACAC+CGG 0.666173 1_4:-58433971 None:intergenic
CATGTCATATGATGTTGTAG+GGG 0.666869 1_4:+58436563 Msa0173280:CDS
AGACACTGAAGTAGGAGGCA+CGG 0.667896 1_4:-58433303 None:intergenic
TCCCACCATATAACCCAGCA+GGG 0.668296 1_4:-58432373 None:intergenic
TGTCAAGACAGTATCTACAA+AGG 0.690460 1_4:-58432210 None:intergenic
AGCTGCCGATAGTAACTGAG+TGG 0.693450 1_4:-58433261 None:intergenic
CAAGACAGTATCTACAAAGG+CGG 0.696073 1_4:-58432207 None:intergenic
GGAATTGGATCATGTAAACG+AGG 0.696890 1_4:+58432073 Msa0173280:CDS
TTGAAGTTTCACAAGAAACG+AGG 0.711096 1_4:+58431774 Msa0173280:five_prime_UTR
ACTACCCTTCTATCACTCAG+AGG 0.724845 1_4:+58431915 Msa0173280:CDS
TTTGAATGGATATTATACGG+CGG 0.727405 1_4:-58431552 None:intergenic
GTTGGAAACAATTAGCATGG+TGG 0.727823 1_4:+58437284 Msa0173280:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAGAATCAATTAAT+GGG - chr1_4:58434667-58434686 None:intergenic 10.0%
!! AATAATATAGAATCAATTAA+TGG - chr1_4:58434668-58434687 None:intergenic 10.0%
!!! ATATCAGTATTGATTTTAAT+CGG - chr1_4:58432149-58432168 None:intergenic 15.0%
!!! AAAATAGAATGATTGATTTT+AGG - chr1_4:58433234-58433253 None:intergenic 15.0%
!! TAATTATTTATGATTCTTAG+TGG + chr1_4:58433489-58433508 Msa0173280:intron 15.0%
!! TAATATAGAATCAATTAATG+GGG - chr1_4:58434666-58434685 None:intergenic 15.0%
!!! TTTATTTTCCTTGTTTTATT+TGG + chr1_4:58434728-58434747 Msa0173280:intron 15.0%
!!! TTATTTTCCTTGTTTTATTT+GGG + chr1_4:58434729-58434748 Msa0173280:intron 15.0%
!!! TTTTTCAAAGGAAAAATAAT+TGG - chr1_4:58435346-58435365 None:intergenic 15.0%
!! TTGAAAATAAAGAATTTACA+AGG - chr1_4:58436227-58436246 None:intergenic 15.0%
!! AATGAATAAATAATGCAATT+TGG - chr1_4:58436427-58436446 None:intergenic 15.0%
!! ATGTTTGAATGGATATTATA+CGG - chr1_4:58431558-58431577 None:intergenic 20.0%
!! ATCTATGAGAATAAGATTAT+GGG - chr1_4:58431590-58431609 None:intergenic 20.0%
!! TATCTATGAGAATAAGATTA+TGG - chr1_4:58431591-58431610 None:intergenic 20.0%
!! TAAAATCAATACTGATATTC+TGG + chr1_4:58432151-58432170 Msa0173280:CDS 20.0%
!!! CATTGTTTCTTATCTTTTTA+TGG + chr1_4:58432287-58432306 Msa0173280:intron 20.0%
!!! TTTAAAATTGTGTCTTTCTT+CGG + chr1_4:58432532-58432551 Msa0173280:intron 20.0%
!! TATGTATGAAATCACAAAAT+AGG - chr1_4:58432685-58432704 None:intergenic 20.0%
!!! AAATCAATCATTCTATTTTC+AGG + chr1_4:58433235-58433254 Msa0173280:intron 20.0%
!!! TAAAAGTATGCTAATTAACT+TGG - chr1_4:58433615-58433634 None:intergenic 20.0%
!! TTCATGAGACAATAATAAAT+TGG - chr1_4:58433649-58433668 None:intergenic 20.0%
!! AATAAGTAAGAAACGAAAAA+GGG - chr1_4:58434452-58434471 None:intergenic 20.0%
!! AAATAAGTAAGAAACGAAAA+AGG - chr1_4:58434453-58434472 None:intergenic 20.0%
!! CTTAGATAACAAATATCAAA+GGG - chr1_4:58435167-58435186 None:intergenic 20.0%
!! TCTTAGATAACAAATATCAA+AGG - chr1_4:58435168-58435187 None:intergenic 20.0%
!! AAAAATAAAAGTGATCCAAA+AGG + chr1_4:58435505-58435524 Msa0173280:intron 20.0%
!! AAAATAAAAGTGATCCAAAA+GGG + chr1_4:58435506-58435525 Msa0173280:intron 20.0%
!! ATTTCAAGGACAAAATTTAT+AGG - chr1_4:58435559-58435578 None:intergenic 20.0%
!!! TGTATTTTCTCTATATTTCA+AGG - chr1_4:58435573-58435592 None:intergenic 20.0%
!! ATAGAGAAAATACAATGTTA+TGG + chr1_4:58435579-58435598 Msa0173280:intron 20.0%
!! TAGAGAAAATACAATGTTAT+GGG + chr1_4:58435580-58435599 Msa0173280:intron 20.0%
!! TAACATTGCAAATTGTTTAT+AGG + chr1_4:58435876-58435895 Msa0173280:intron 20.0%
!! AACATTGCAAATTGTTTATA+GGG + chr1_4:58435877-58435896 Msa0173280:intron 20.0%
!! TTCAAAGAATCTTACAAAAA+AGG - chr1_4:58436054-58436073 None:intergenic 20.0%
!! ATTTAGGTCACTAATTTATT+TGG - chr1_4:58436157-58436176 None:intergenic 20.0%
!! AAATAAATTAGTGACCTAAA+TGG + chr1_4:58436156-58436175 Msa0173280:intron 20.0%
!!! CATTTTTTGAAATACAAACT+TGG + chr1_4:58436443-58436462 Msa0173280:intron 20.0%
!! TTACATAAATATCAAAACTG+AGG - chr1_4:58436828-58436847 None:intergenic 20.0%
!!! CTATCAATACTTTTATACAA+CGG - chr1_4:58436972-58436991 None:intergenic 20.0%
!! TGTGCACTAATATAATATAA+AGG - chr1_4:58437389-58437408 None:intergenic 20.0%
!! CATAATAAATTGAGTTAGTT+AGG + chr1_4:58437407-58437426 Msa0173280:three_prime_UTR 20.0%
!!! TACTGTTTTGATGAAAAAAT+TGG + chr1_4:58437638-58437657 Msa0173280:three_prime_UTR 20.0%
!! ATATATGTAGTACATATGTA+TGG + chr1_4:58437689-58437708 Msa0173280:three_prime_UTR 20.0%
! GGAATAATGTAATGTTTGAA+TGG - chr1_4:58431569-58431588 None:intergenic 25.0%
!! CTCATAGATAGATAAGATTT+TGG + chr1_4:58431601-58431620 Msa0173280:five_prime_UTR 25.0%
! ATGAACATTACTCAAAACAA+AGG + chr1_4:58431673-58431692 Msa0173280:five_prime_UTR 25.0%
! TGAACATTACTCAAAACAAA+GGG + chr1_4:58431674-58431693 Msa0173280:five_prime_UTR 25.0%
! AACGAATACTGATATACAAT+TGG + chr1_4:58432052-58432071 Msa0173280:CDS 25.0%
! TACTGATATACAATTGGAAT+TGG + chr1_4:58432058-58432077 Msa0173280:CDS 25.0%
!!! GGTTGTTTTTTCATAGTTTT+AGG + chr1_4:58432245-58432264 Msa0173280:intron 25.0%
!!! TTATGGTTTGTTATGTATGT+AGG + chr1_4:58432304-58432323 Msa0173280:intron 25.0%
! TGATATGGATGTAGTTATTA+AGG - chr1_4:58432415-58432434 None:intergenic 25.0%
! CTAAGACAACATATATGATA+TGG - chr1_4:58432430-58432449 None:intergenic 25.0%
! TTACATTCCACAAGTAAATA+GGG - chr1_4:58432606-58432625 None:intergenic 25.0%
! TTTACATTCCACAAGTAAAT+AGG - chr1_4:58432607-58432626 None:intergenic 25.0%
!! ATATCCTGCTTGATTTTATA+AGG - chr1_4:58433201-58433220 None:intergenic 25.0%
! AATAACAAACTACATGTCAA+GGG - chr1_4:58433464-58433483 None:intergenic 25.0%
! AAATAACAAACTACATGTCA+AGG - chr1_4:58433465-58433484 None:intergenic 25.0%
!! TAGCATACTTTTATACTTCT+CGG + chr1_4:58433622-58433641 Msa0173280:intron 25.0%
! TATTGTCTCATGAAATATTC+AGG + chr1_4:58433655-58433674 Msa0173280:intron 25.0%
!!! ATTTTTCAATTTCAGATAGC+TGG + chr1_4:58433726-58433745 Msa0173280:intron 25.0%
! GTATGTGAAAATTTCCTAAA+TGG + chr1_4:58434284-58434303 Msa0173280:intron 25.0%
! TTTCCAAATATTGTTAGTTG+AGG + chr1_4:58434507-58434526 Msa0173280:intron 25.0%
! TAACCTAAAAAACTAATCCT+CGG - chr1_4:58434756-58434775 None:intergenic 25.0%
!! TTGAAAATATTCTCTTTTCC+AGG + chr1_4:58435004-58435023 Msa0173280:intron 25.0%
! TTACAATCAGAAACAAGAAA+AGG - chr1_4:58435124-58435143 None:intergenic 25.0%
! TGATTGTAAGTCACTAAAAA+AGG + chr1_4:58435135-58435154 Msa0173280:intron 25.0%
!!! CACTGATATTTTTGCAATTT+TGG - chr1_4:58435260-58435279 None:intergenic 25.0%
! TTCAAAGGAAAAATAATTGG+AGG - chr1_4:58435343-58435362 None:intergenic 25.0%
!!! ATTTGTCATCGATTTTTCAA+AGG - chr1_4:58435358-58435377 None:intergenic 25.0%
! AAATAAAAGTGATCCAAAAG+GGG + chr1_4:58435507-58435526 Msa0173280:intron 25.0%
! AATGTGCAGTATATATTTGA+TGG + chr1_4:58435637-58435656 Msa0173280:intron 25.0%
!!! AAAAGCATAGCTTTTAACTT+TGG - chr1_4:58435705-58435724 None:intergenic 25.0%
!!! AGCTATGCTTTTTATACTAT+AGG + chr1_4:58435713-58435732 Msa0173280:intron 25.0%
!!! GCTATGCTTTTTATACTATA+GGG + chr1_4:58435714-58435733 Msa0173280:intron 25.0%
! ACATTGCAAATTGTTTATAG+GGG + chr1_4:58435878-58435897 Msa0173280:intron 25.0%
!!! TTATAGGGGATATTTTGATA+TGG + chr1_4:58435892-58435911 Msa0173280:intron 25.0%
! GACAATCACTATTTACAAAA+AGG - chr1_4:58435951-58435970 None:intergenic 25.0%
! TATACAATAACCATATCAGT+AGG - chr1_4:58435975-58435994 None:intergenic 25.0%
!!! AGCTTCATTGTTTTTATAAC+TGG + chr1_4:58436306-58436325 Msa0173280:intron 25.0%
! TGTATGAGAGAAAAAAGATT+TGG + chr1_4:58436396-58436415 Msa0173280:intron 25.0%
!! AATACAAACTTGGATTTTGA+TGG + chr1_4:58436453-58436472 Msa0173280:intron 25.0%
! GAAAAATATGGTAGTAAACA+AGG - chr1_4:58436872-58436891 None:intergenic 25.0%
! AGACATGTCATAGAAAAATA+TGG - chr1_4:58436884-58436903 None:intergenic 25.0%
!! TGTTATATTTTTCCTTTCTC+CGG + chr1_4:58437029-58437048 Msa0173280:intron 25.0%
! CAATGGAACAATAAAATTTC+CGG - chr1_4:58437051-58437070 None:intergenic 25.0%
! CTAATTGTTTCCAACATATT+TGG - chr1_4:58437279-58437298 None:intergenic 25.0%
!! GTTTTCCTTATTCTTTTCTA+AGG + chr1_4:58437473-58437492 Msa0173280:three_prime_UTR 25.0%
! CTAAACCTTAGAAAAGAATA+AGG - chr1_4:58437481-58437500 None:intergenic 25.0%
!! ATTACTTCATTTTGAGCAAA+TGG + chr1_4:58437605-58437624 Msa0173280:three_prime_UTR 25.0%
!!! GTTTTGATGAAAAAATTGGT+AGG + chr1_4:58437642-58437661 Msa0173280:three_prime_UTR 25.0%
!! ATTTCGTGTTTTTGTTTGTG+TGG - chr1_4:58431524-58431543 None:intergenic 30.0%
TTTGAATGGATATTATACGG+CGG - chr1_4:58431555-58431574 None:intergenic 30.0%
ATTACTCAAAACAAAGGGAA+AGG + chr1_4:58431679-58431698 Msa0173280:five_prime_UTR 30.0%
AAATGGATGAGATTAAAGGA+GGG - chr1_4:58431821-58431840 None:intergenic 30.0%
AATCAATACTGATATTCTGG+TGG + chr1_4:58432154-58432173 Msa0173280:CDS 30.0%
ACTATGAAAAAACAACCTAC+AGG - chr1_4:58432242-58432261 None:intergenic 30.0%
TACATTCCACAAGTAAATAG+GGG - chr1_4:58432605-58432624 None:intergenic 30.0%
TATGTATAGAGCAATGGATA+CGG - chr1_4:58432640-58432659 None:intergenic 30.0%
TATCCATTGCTCTATACATA+TGG + chr1_4:58432640-58432659 Msa0173280:intron 30.0%
ATTCCATATGTATAGAGCAA+TGG - chr1_4:58432646-58432665 None:intergenic 30.0%
AAATGCTGAAAATCTTACGT+TGG + chr1_4:58432708-58432727 Msa0173280:intron 30.0%
AAGTGCTTTCATTTGTTTGA+TGG + chr1_4:58432759-58432778 Msa0173280:intron 30.0%
AGTGCTTTCATTTGTTTGAT+GGG + chr1_4:58432760-58432779 Msa0173280:intron 30.0%
! AAGGTGATATCAAACAGTTT+TGG - chr1_4:58432857-58432876 None:intergenic 30.0%
CAAACATCAATAAGTGTACA+AGG - chr1_4:58432895-58432914 None:intergenic 30.0%
TACACTTATTGATGTTTGTG+TGG + chr1_4:58432897-58432916 Msa0173280:intron 30.0%
! TTGCATTGTTGCAAATTTTG+TGG + chr1_4:58432979-58432998 Msa0173280:CDS 30.0%
ACTAAAGTGGCTATAATTGT+TGG + chr1_4:58433085-58433104 Msa0173280:intron 30.0%
ACAGTTAAGTAGTTATATGC+AGG - chr1_4:58433154-58433173 None:intergenic 30.0%
TAACTACTTAACTGTCATTC+AGG + chr1_4:58433159-58433178 Msa0173280:intron 30.0%
ATTTGTGAGTTTCAAAGTCA+GGG - chr1_4:58433708-58433727 None:intergenic 30.0%
AATTTGTGAGTTTCAAAGTC+AGG - chr1_4:58433709-58433728 None:intergenic 30.0%
ACTGTCATATGAAATCTTCA+GGG - chr1_4:58434086-58434105 None:intergenic 30.0%
TACTGTCATATGAAATCTTC+AGG - chr1_4:58434087-58434106 None:intergenic 30.0%
AGTATATGCTTACATCTATC+TGG + chr1_4:58434103-58434122 Msa0173280:intron 30.0%
TTCAATATTGTTCTTACACC+AGG + chr1_4:58434229-58434248 Msa0173280:CDS 30.0%
TAAAGATTATGCTGACAATG+AGG + chr1_4:58434355-58434374 Msa0173280:intron 30.0%
AAAGATTATGCTGACAATGA+GGG + chr1_4:58434356-58434375 Msa0173280:intron 30.0%
AAAATCATAACTTCACTCCA+AGG - chr1_4:58434537-58434556 None:intergenic 30.0%
TTACTGTTTGGTATAGCATT+CGG - chr1_4:58434577-58434596 None:intergenic 30.0%
ACCAAACAGTAAAAAAGAGA+AGG + chr1_4:58434585-58434604 Msa0173280:intron 30.0%
CCAAACAGTAAAAAAGAGAA+GGG + chr1_4:58434586-58434605 Msa0173280:intron 30.0%
AGTAAAAAAGAGAAGGGAAA+AGG + chr1_4:58434592-58434611 Msa0173280:intron 30.0%
GTAAAAAAGAGAAGGGAAAA+GGG + chr1_4:58434593-58434612 Msa0173280:intron 30.0%
! CAAGCAATTTGGCATTTTAA+AGG + chr1_4:58434903-58434922 Msa0173280:CDS 30.0%
GAATATAATTACAACAGCCT+TGG + chr1_4:58435186-58435205 Msa0173280:intron 30.0%
!! TACTAGTGGATTGAAATGAT+AGG + chr1_4:58435213-58435232 Msa0173280:intron 30.0%
ATACTCCTAGATCATATCTA+GGG + chr1_4:58435312-58435331 Msa0173280:intron 30.0%
AAATACAATGTTATGGGACA+AGG + chr1_4:58435586-58435605 Msa0173280:intron 30.0%
!! TATATATTTGATGGTGGTGT+TGG + chr1_4:58435646-58435665 Msa0173280:intron 30.0%
ACTTCTTTCAAGCTTCAAAT+AGG + chr1_4:58435804-58435823 Msa0173280:intron 30.0%
TTCCTTTGACATTCAAACAT+GGG + chr1_4:58435838-58435857 Msa0173280:intron 30.0%
!!! GGATATTTTGATATGGACAA+AGG + chr1_4:58435899-58435918 Msa0173280:intron 30.0%
TGATATTTGTAAAGAGGGTT+TGG - chr1_4:58436012-58436031 None:intergenic 30.0%
ACACGTGATATTTGTAAAGA+GGG - chr1_4:58436017-58436036 None:intergenic 30.0%
AACACGTGATATTTGTAAAG+AGG - chr1_4:58436018-58436037 None:intergenic 30.0%
AAGATTCTTTGAACGTATCT+AGG + chr1_4:58436061-58436080 Msa0173280:intron 30.0%
AACAATCCATATCACCATTT+AGG - chr1_4:58436173-58436192 None:intergenic 30.0%
! ATTTGTTAGCAAACTAGACT+TGG + chr1_4:58436258-58436277 Msa0173280:intron 30.0%
!! AAACTAGACTTGGTTTGTAT+TGG + chr1_4:58436268-58436287 Msa0173280:intron 30.0%
!! AACTAGACTTGGTTTGTATT+GGG + chr1_4:58436269-58436288 Msa0173280:intron 30.0%
! TGTATTGGGTGAAAATTTTG+TGG + chr1_4:58436283-58436302 Msa0173280:intron 30.0%
CTACTGAAAAAAGTTTCAAC+AGG + chr1_4:58436335-58436354 Msa0173280:intron 30.0%
ACATGTCATATGATGTTGTA+GGG + chr1_4:58436562-58436581 Msa0173280:CDS 30.0%
ACAATAAAATTTCCGGAGAA+AGG - chr1_4:58437044-58437063 None:intergenic 30.0%
! CGGAAATTTTATTGTTCCAT+TGG + chr1_4:58437049-58437068 Msa0173280:intron 30.0%
CAGTCTTTGTAAAGTAGAAA+AGG + chr1_4:58437079-58437098 Msa0173280:intron 30.0%
ACAATTAGAAATCCATAGAC+TGG - chr1_4:58437150-58437169 None:intergenic 30.0%
TATGTTGGAAACAATTAGCA+TGG + chr1_4:58437281-58437300 Msa0173280:three_prime_UTR 30.0%
AAAGCCATAGAAAAAATCTC+CGG - chr1_4:58437335-58437354 None:intergenic 30.0%
TCCATTTACAGAAGAATTAC+AGG - chr1_4:58437359-58437378 None:intergenic 30.0%
CTTTACAAAACGTTTATGCA+TGG - chr1_4:58437445-58437464 None:intergenic 30.0%
AGAATTGTGGTAATTCTGAT+AGG + chr1_4:58437521-58437540 Msa0173280:three_prime_UTR 30.0%
GAATTGTGGTAATTCTGATA+GGG + chr1_4:58437522-58437541 Msa0173280:three_prime_UTR 30.0%
CTCAATTGCTCACTATTATT+TGG + chr1_4:58437566-58437585 Msa0173280:three_prime_UTR 30.0%
TGCTCACTATTATTTGGATT+TGG + chr1_4:58437572-58437591 Msa0173280:three_prime_UTR 30.0%
GCTCACTATTATTTGGATTT+GGG + chr1_4:58437573-58437592 Msa0173280:three_prime_UTR 30.0%
TATTATTTGGATTTGGGTGA+AGG + chr1_4:58437579-58437598 Msa0173280:three_prime_UTR 30.0%
TGATGAAAAAATTGGTAGGT+CGG + chr1_4:58437646-58437665 Msa0173280:three_prime_UTR 30.0%
TACATATGTATGGTAAGTTG+TGG + chr1_4:58437699-58437718 Msa0173280:three_prime_UTR 30.0%
AACTTGAAGGAAAACCAGTT+AGG - chr1_4:58431747-58431766 None:intergenic 35.0%
TTGAAGTTTCACAAGAAACG+AGG + chr1_4:58431774-58431793 Msa0173280:five_prime_UTR 35.0%
GAAATGGATGAGATTAAAGG+AGG - chr1_4:58431822-58431841 None:intergenic 35.0%
GGTGAAATGGATGAGATTAA+AGG - chr1_4:58431825-58431844 None:intergenic 35.0%
TGATAGAAGGGTAGTAATTG+AGG - chr1_4:58431910-58431929 None:intergenic 35.0%
AATACCTCTGAGTGATAGAA+GGG - chr1_4:58431922-58431941 None:intergenic 35.0%
TAATACCTCTGAGTGATAGA+AGG - chr1_4:58431923-58431942 None:intergenic 35.0%
AGTATTCGTTATCGAACATC+TGG - chr1_4:58432042-58432061 None:intergenic 35.0%
!!! GTATTGATTTTAATCGGCAC+AGG - chr1_4:58432143-58432162 None:intergenic 35.0%
TGTCAAGACAGTATCTACAA+AGG - chr1_4:58432213-58432232 None:intergenic 35.0%
GAAAAAACAACCTACAGGTA+AGG - chr1_4:58432237-58432256 None:intergenic 35.0%
!! TATGTAGGTTTTGTCTGAAG+AGG + chr1_4:58432319-58432338 Msa0173280:intron 35.0%
ACATTCCACAAGTAAATAGG+GGG - chr1_4:58432604-58432623 None:intergenic 35.0%
GCTCTATACATATGGAATTG+TGG + chr1_4:58432648-58432667 Msa0173280:intron 35.0%
ACATATGGAATTGTGGAATG+TGG + chr1_4:58432655-58432674 Msa0173280:intron 35.0%
CAATAAGTGTACAAGGCATA+AGG - chr1_4:58432888-58432907 None:intergenic 35.0%
AAAGTGGCTATAATTGTTGG+TGG + chr1_4:58433088-58433107 Msa0173280:intron 35.0%
!! TCCATTAATTTGCCAACCAA+GGG - chr1_4:58433115-58433134 None:intergenic 35.0%
TAGTTATATGCAGGAACTCT+CGG - chr1_4:58433145-58433164 None:intergenic 35.0%
! TGAGCCTTATAAAATCAAGC+AGG + chr1_4:58433194-58433213 Msa0173280:intron 35.0%
TCGAATTGATCTGTTATCTG+AGG + chr1_4:58433578-58433597 Msa0173280:CDS 35.0%
CAGGATGAAATTTGGAAAGA+AGG - chr1_4:58433770-58433789 None:intergenic 35.0%
GCAGATTACAGGATGAAATT+TGG - chr1_4:58433778-58433797 None:intergenic 35.0%
! GCAACTTTTAAGCAGATTAC+AGG - chr1_4:58433789-58433808 None:intergenic 35.0%
ATCTGCTTAAAAGTTGCTTC+TGG + chr1_4:58433792-58433811 Msa0173280:CDS 35.0%
AACAGAGAACTTACTGTAAC+AGG - chr1_4:58433837-58433856 None:intergenic 35.0%
TGAATCTATCTTCTGACTGA+AGG - chr1_4:58433884-58433903 None:intergenic 35.0%
TTAACCAACAAGCTTTCTAC+CGG + chr1_4:58433952-58433971 Msa0173280:CDS 35.0%
ATGAAATCTTCAGGGTCTAT+GGG - chr1_4:58434078-58434097 None:intergenic 35.0%
TATGAAATCTTCAGGGTCTA+TGG - chr1_4:58434079-58434098 None:intergenic 35.0%
ATATGCTTACATCTATCTGG+TGG + chr1_4:58434106-58434125 Msa0173280:intron 35.0%
AAAACCAGTTGTTAAAGGTC+TGG + chr1_4:58434129-58434148 Msa0173280:intron 35.0%
! ACAGCATTTTTAACACAGCA+TGG + chr1_4:58434262-58434281 Msa0173280:CDS 35.0%
TCAAAGAAGCTTCCCAAAAA+CGG - chr1_4:58434312-58434331 None:intergenic 35.0%
AAGATTATGCTGACAATGAG+GGG + chr1_4:58434357-58434376 Msa0173280:intron 35.0%
TATTCTTTGTCTAGCACGAA+TGG + chr1_4:58434482-58434501 Msa0173280:intron 35.0%
GGACCTCAACTAACAATATT+TGG - chr1_4:58434513-58434532 None:intergenic 35.0%
!!! CCCTTCTCTTTTTTACTGTT+TGG - chr1_4:58434589-58434608 None:intergenic 35.0%
! AAATATTCTCTTTTCCAGGC+TGG + chr1_4:58435008-58435027 Msa0173280:intron 35.0%
! AATATTCTCTTTTCCAGGCT+GGG + chr1_4:58435009-58435028 Msa0173280:intron 35.0%
!! TCAAGCTTTATTTCTCAGCA+TGG + chr1_4:58435049-58435068 Msa0173280:CDS 35.0%
AGAAACAAGAAAAGGAGAAG+AGG - chr1_4:58435116-58435135 None:intergenic 35.0%
TGATAGGTATAATTGAAGCC+TGG + chr1_4:58435229-58435248 Msa0173280:intron 35.0%
!!! TTTGCAATTTTGGAGTATCC+AGG - chr1_4:58435250-58435269 None:intergenic 35.0%
GATACTCCTAGATCATATCT+AGG + chr1_4:58435311-58435330 Msa0173280:intron 35.0%
! AGATACAGCTTTGATGCATT+TGG + chr1_4:58435385-58435404 Msa0173280:intron 35.0%
! GATACAGCTTTGATGCATTT+GGG + chr1_4:58435386-58435405 Msa0173280:intron 35.0%
! ATACAGCTTTGATGCATTTG+GGG + chr1_4:58435387-58435406 Msa0173280:intron 35.0%
AGGCTTAACAAGAAGCTTTA+AGG - chr1_4:58435425-58435444 None:intergenic 35.0%
!! AAGCCTTATTCTCCATCATA+TGG + chr1_4:58435439-58435458 Msa0173280:intron 35.0%
GTGCAGTATATATTTGATGG+TGG + chr1_4:58435640-58435659 Msa0173280:intron 35.0%
TTGAAGCTTGAAAGAAGTCT+TGG - chr1_4:58435802-58435821 None:intergenic 35.0%
CTTCCTTTGACATTCAAACA+TGG + chr1_4:58435837-58435856 Msa0173280:intron 35.0%
AACCCATGTTTGAATGTCAA+AGG - chr1_4:58435843-58435862 None:intergenic 35.0%
AAATTCCTATCAATGAAGCC+TGG - chr1_4:58436120-58436139 None:intergenic 35.0%
TAGTGACCTAAATGGTGATA+TGG + chr1_4:58436164-58436183 Msa0173280:intron 35.0%
!! AGATAGTGCGTTTTGAATAC+TGG + chr1_4:58436195-58436214 Msa0173280:intron 35.0%
!! TGTTTCTGCAGATTTTGTCA+CGG + chr1_4:58436532-58436551 Msa0173280:intron 35.0%
CACATGTCATATGATGTTGT+AGG + chr1_4:58436561-58436580 Msa0173280:CDS 35.0%
CATGTCATATGATGTTGTAG+GGG + chr1_4:58436563-58436582 Msa0173280:CDS 35.0%
! TGAGATTTGCTTTGGATGAT+GGG - chr1_4:58436611-58436630 None:intergenic 35.0%
! ATGAGATTTGCTTTGGATGA+TGG - chr1_4:58436612-58436631 None:intergenic 35.0%
TCATCCAAAGCAAATCTCAT+CGG + chr1_4:58436612-58436631 Msa0173280:CDS 35.0%
GCTAAACATCCAAAATGAGA+AGG - chr1_4:58436708-58436727 None:intergenic 35.0%
AATGTTGTCTCTTCTATCAG+TGG + chr1_4:58436728-58436747 Msa0173280:CDS 35.0%
ACTGAGGATGATAAGAGAAA+AGG - chr1_4:58436812-58436831 None:intergenic 35.0%
ACAAGGAACGATAAATGCAA+GGG - chr1_4:58436855-58436874 None:intergenic 35.0%
AACAAGGAACGATAAATGCA+AGG - chr1_4:58436856-58436875 None:intergenic 35.0%
ACACACAAATACCAAAGTTG+AGG - chr1_4:58436947-58436966 None:intergenic 35.0%
ATCTGACAAGTAACTTCTGT+TGG + chr1_4:58437194-58437213 Msa0173280:intron 35.0%
TGGACAAGAACCAAATATGT+TGG + chr1_4:58437266-58437285 Msa0173280:three_prime_UTR 35.0%
GCCTGTAATTCTTCTGTAAA+TGG + chr1_4:58437355-58437374 Msa0173280:three_prime_UTR 35.0%
ATTGAGTTAGTTAGGTGTCT+AGG + chr1_4:58437415-58437434 Msa0173280:three_prime_UTR 35.0%
! ATCGAAGTGTGTGTGTTTTG+TGG - chr1_4:58431636-58431655 None:intergenic 40.0%
TCTAGTAAGACTGCATGAGT+TGG + chr1_4:58431715-58431734 Msa0173280:five_prime_UTR 40.0%
TCTTGTGAAACTTCAAGCTG+TGG - chr1_4:58431770-58431789 None:intergenic 40.0%
ACAAGAAACGAGGACAACTA+TGG + chr1_4:58431784-58431803 Msa0173280:exon 40.0%
AAGAAGGAGGAATGGTGAAA+TGG - chr1_4:58431838-58431857 None:intergenic 40.0%
GGAATTGGATCATGTAAACG+AGG + chr1_4:58432073-58432092 Msa0173280:CDS 40.0%
GTAAACGAGGATAAGAGTGA+AGG + chr1_4:58432086-58432105 Msa0173280:CDS 40.0%
CAAGACAGTATCTACAAAGG+CGG - chr1_4:58432210-58432229 None:intergenic 40.0%
AGCACTTCATCTAAGTGACA+GGG - chr1_4:58432567-58432586 None:intergenic 40.0%
! CACAAGTAAATAGGGGGTTT+TGG - chr1_4:58432598-58432617 None:intergenic 40.0%
CAAAACCCCCTATTTACTTG+TGG + chr1_4:58432596-58432615 Msa0173280:intron 40.0%
AAGGCATAAGGCACGTAATA+AGG - chr1_4:58432876-58432895 None:intergenic 40.0%
CTTATTGATGTTTGTGTGGC+TGG + chr1_4:58432901-58432920 Msa0173280:intron 40.0%
! CAAATTTTGTGGAGCAGCTT+TGG + chr1_4:58432990-58433009 Msa0173280:CDS 40.0%
GCTTGAATGAATCAAGGCAA+TGG - chr1_4:58433035-58433054 None:intergenic 40.0%
CAAGAGGCTTGAATGAATCA+AGG - chr1_4:58433041-58433060 None:intergenic 40.0%
!! TATAATTGTTGGTGGTCCCT+TGG + chr1_4:58433096-58433115 Msa0173280:intron 40.0%
TCCCTTGGTTGGCAAATTAA+TGG + chr1_4:58433111-58433130 Msa0173280:intron 40.0%
!! GTCCATTAATTTGCCAACCA+AGG - chr1_4:58433116-58433135 None:intergenic 40.0%
AATGTAGACACTGAAGTAGG+AGG - chr1_4:58433311-58433330 None:intergenic 40.0%
AGCAATGTAGACACTGAAGT+AGG - chr1_4:58433314-58433333 None:intergenic 40.0%
GAAACCAATACGACAAACCA+TGG - chr1_4:58433344-58433363 None:intergenic 40.0%
!! TTTGTCGTATTGGTTTCAGC+TGG + chr1_4:58433347-58433366 Msa0173280:CDS 40.0%
!! TTGTCGTATTGGTTTCAGCT+GGG + chr1_4:58433348-58433367 Msa0173280:CDS 40.0%
! TATTGAGAAGCTTTGTGGTG+TGG + chr1_4:58433373-58433392 Msa0173280:CDS 40.0%
AAACTACATGTCAAGGGAAC+AGG - chr1_4:58433458-58433477 None:intergenic 40.0%
!! AGTTGCTTCTGGCTTAATGA+TGG + chr1_4:58433803-58433822 Msa0173280:CDS 40.0%
!! GTTGCTTCTGGCTTAATGAT+GGG + chr1_4:58433804-58433823 Msa0173280:CDS 40.0%
CTGAAGGAAGTTAATGAACG+AGG - chr1_4:58433868-58433887 None:intergenic 40.0%
TTCATCGAATGATCTGCAAC+AGG - chr1_4:58434007-58434026 None:intergenic 40.0%
GGTGGAAAACCAGTTGTTAA+AGG + chr1_4:58434124-58434143 Msa0173280:intron 40.0%
! TTCCTAAATGGTCCCGTTTT+TGG + chr1_4:58434296-58434315 Msa0173280:intron 40.0%
!! TCCTAAATGGTCCCGTTTTT+GGG + chr1_4:58434297-58434316 Msa0173280:intron 40.0%
CAAAGAAGCTTCCCAAAAAC+GGG - chr1_4:58434311-58434330 None:intergenic 40.0%
ATCATAACTTCACTCCAAGG+TGG - chr1_4:58434534-58434553 None:intergenic 40.0%
!!! GGACCGAGGATTAGTTTTTT+AGG + chr1_4:58434750-58434769 Msa0173280:intron 40.0%
! CTAAATCCTCCAATGATGGA+TGG - chr1_4:58434829-58434848 None:intergenic 40.0%
TCCATCATTGGAGGATTTAG+CGG + chr1_4:58434829-58434848 Msa0173280:CDS 40.0%
! TAGCGGAATGTGTGCTTTTA+TGG + chr1_4:58434846-58434865 Msa0173280:CDS 40.0%
! AGCGGAATGTGTGCTTTTAT+GGG + chr1_4:58434847-58434866 Msa0173280:CDS 40.0%
! ATATTCTCTTTTCCAGGCTG+GGG + chr1_4:58435010-58435029 Msa0173280:intron 40.0%
GCTGTTGCTGTATATATGAG+TGG + chr1_4:58435071-58435090 Msa0173280:CDS 40.0%
CAATCCACTAGTAACTACCA+AGG - chr1_4:58435206-58435225 None:intergenic 40.0%
!! TAGGAGTATCGTATGAGTGT+CGG - chr1_4:58435301-58435320 None:intergenic 40.0%
ATGCTCCCTAGATATGATCT+AGG - chr1_4:58435320-58435339 None:intergenic 40.0%
! TCGCCATATGATGGAGAATA+AGG - chr1_4:58435445-58435464 None:intergenic 40.0%
TAATTCCTCTCGCCATATGA+TGG - chr1_4:58435454-58435473 None:intergenic 40.0%
TAAAAGTGATCCAAAAGGGG+AGG + chr1_4:58435510-58435529 Msa0173280:intron 40.0%
AAAAGTGATCCAAAAGGGGA+GGG + chr1_4:58435511-58435530 Msa0173280:intron 40.0%
TTATGGGACAAGGAAAGACA+AGG + chr1_4:58435596-58435615 Msa0173280:intron 40.0%
ACAAGGAAAGACAAGGTTGT+GGG + chr1_4:58435603-58435622 Msa0173280:intron 40.0%
! TGGTGTTGGACTTCTTGAAT+TGG + chr1_4:58435660-58435679 Msa0173280:intron 40.0%
TTGGACTTCTTGAATTGGCT+GGG + chr1_4:58435665-58435684 Msa0173280:intron 40.0%
!! AAGTCTTGGCTCTACTGAAT+TGG - chr1_4:58435788-58435807 None:intergenic 40.0%
GTGATTGTCACCTACTGATA+TGG + chr1_4:58435962-58435981 Msa0173280:intron 40.0%
TGTATCCAGGCTTCATTGAT+AGG + chr1_4:58436112-58436131 Msa0173280:intron 40.0%
CATCCAAAGCAAATCTCATC+GGG + chr1_4:58436613-58436632 Msa0173280:CDS 40.0%
! GCAAACGATCCTTCTCATTT+TGG + chr1_4:58436696-58436715 Msa0173280:CDS 40.0%
TTGTCTCTTCTATCAGTGGT+TGG + chr1_4:58436732-58436751 Msa0173280:CDS 40.0%
!!! AGGCTTTTTTGTTCGTCTGT+TGG - chr1_4:58436792-58436811 None:intergenic 40.0%
AAGTTGAGGATCACAAGTGA+AGG - chr1_4:58436933-58436952 None:intergenic 40.0%
TCACTTGTGATCCTCAACTT+TGG + chr1_4:58436933-58436952 Msa0173280:intron 40.0%
GTAAACACTGATCCAGTCTA+TGG + chr1_4:58437135-58437154 Msa0173280:intron 40.0%
ATCCAACAGTCTTTGCAACA+AGG - chr1_4:58437245-58437264 None:intergenic 40.0%
GTTGGAAACAATTAGCATGG+TGG + chr1_4:58437284-58437303 Msa0173280:three_prime_UTR 40.0%
!!! GAAGCCGGAGATTTTTTCTA+TGG + chr1_4:58437328-58437347 Msa0173280:three_prime_UTR 40.0%
! TGAGTTGGACGAAACCTAAC+TGG + chr1_4:58431730-58431749 Msa0173280:five_prime_UTR 45.0%
CTTCAAGCTGTGGAACTTGA+AGG - chr1_4:58431760-58431779 None:intergenic 45.0%
ATGCGAGAAAGAAGGAGGAA+TGG - chr1_4:58431846-58431865 None:intergenic 45.0%
CGATAGCGTAATCTCGAAGA+AGG - chr1_4:58431872-58431891 None:intergenic 45.0%
ACTACCCTTCTATCACTCAG+AGG + chr1_4:58431915-58431934 Msa0173280:CDS 45.0%
AACGAGGATAAGAGTGAAGG+AGG + chr1_4:58432089-58432108 Msa0173280:CDS 45.0%
AGGATAAGAGTGAAGGAGGA+GGG + chr1_4:58432093-58432112 Msa0173280:CDS 45.0%
TTAATCGGCACAGGACATTC+AGG - chr1_4:58432134-58432153 None:intergenic 45.0%
GTCTTGACATCCTTACCTGT+AGG + chr1_4:58432224-58432243 Msa0173280:intron 45.0%
ACATGTTCTTGCAGCTACTC+CGG + chr1_4:58432346-58432365 Msa0173280:CDS 45.0%
GAGCACTTCATCTAAGTGAC+AGG - chr1_4:58432568-58432587 None:intergenic 45.0%
AACTTCAGATGTGCCTAGCT+TGG + chr1_4:58432806-58432825 Msa0173280:intron 45.0%
GACAACAAGATCACCAAGCT+AGG - chr1_4:58432822-58432841 None:intergenic 45.0%
!!! AGCAGCTTTGGACTTTTGCT+TGG + chr1_4:58433002-58433021 Msa0173280:CDS 45.0%
TGAATCAAGGCAATGGCAGA+AGG - chr1_4:58433028-58433047 None:intergenic 45.0%
! GGTGGGTTTCTTCACTAAAG+TGG + chr1_4:58433072-58433091 Msa0173280:intron 45.0%
ATGCAGGAACTCTCGGTAAA+TGG - chr1_4:58433138-58433157 None:intergenic 45.0%
!! TGTCGTATTGGTTTCAGCTG+GGG + chr1_4:58433349-58433368 Msa0173280:CDS 45.0%
! AAGCTTTGTGGTGTGGCTTT+GGG + chr1_4:58433380-58433399 Msa0173280:CDS 45.0%
GGTTTATTTCCACAGCTGAC+AGG + chr1_4:58433510-58433529 Msa0173280:intron 45.0%
CTATTAACTCCTGTCAGCTG+TGG - chr1_4:58433522-58433541 None:intergenic 45.0%
CACAGCTGACAGGAGTTAAT+AGG + chr1_4:58433520-58433539 Msa0173280:intron 45.0%
!! ATAGCTGGAGCATTGCTGTT+TGG + chr1_4:58433741-58433760 Msa0173280:CDS 45.0%
AACACCGGTAGAAAGCTTGT+TGG - chr1_4:58433959-58433978 None:intergenic 45.0%
TTTCTACCGGTGTTCTTGAC+CGG + chr1_4:58433965-58433984 Msa0173280:CDS 45.0%
CAACAGGTTTGTGACGGTTT+AGG - chr1_4:58433991-58434010 None:intergenic 45.0%
GATCTGCAACAGGTTTGTGA+CGG - chr1_4:58433997-58434016 None:intergenic 45.0%
GCATCAGATGCTGACAGTAT+AGG + chr1_4:58434033-58434052 Msa0173280:CDS 45.0%
TTCAGGGTCTATGGGAAGAT+CGG - chr1_4:58434070-58434089 None:intergenic 45.0%
GCTTCCAGACCTTTAACAAC+TGG - chr1_4:58434136-58434155 None:intergenic 45.0%
AATGCTGTCATCAAACTGCC+TGG - chr1_4:58434250-58434269 None:intergenic 45.0%
TCCCAAAAACGGGACCATTT+AGG - chr1_4:58434301-58434320 None:intergenic 45.0%
TTGTTAGTTGAGGTCCACCT+TGG + chr1_4:58434517-58434536 Msa0173280:intron 45.0%
GTTGTAGTCTGCATTCTGCT+TGG + chr1_4:58434640-58434659 Msa0173280:intron 45.0%
CCTCGGTCCCAAATAAAACA+AGG - chr1_4:58434739-58434758 None:intergenic 45.0%
!!! CCTTGTTTTATTTGGGACCG+AGG + chr1_4:58434736-58434755 Msa0173280:intron 45.0%
AACAAGTGAGGAGGGAAACT+TGG - chr1_4:58434792-58434811 None:intergenic 45.0%
GTAAGCCTGTAGAACAAGTG+AGG - chr1_4:58434804-58434823 None:intergenic 45.0%
TTACGTCCATCCATCATTGG+AGG + chr1_4:58434820-58434839 Msa0173280:CDS 45.0%
TCCGCTAAATCCTCCAATGA+TGG - chr1_4:58434833-58434852 None:intergenic 45.0%
AACATTCGTCTCTTCGACTC+TGG + chr1_4:58434879-58434898 Msa0173280:CDS 45.0%
TCGACTCTGGTCAAGCAATT+TGG + chr1_4:58434892-58434911 Msa0173280:CDS 45.0%
! ACAGCCTTGGTAGTTACTAG+TGG + chr1_4:58435199-58435218 Msa0173280:intron 45.0%
ATTCTCCATCATATGGCGAG+AGG + chr1_4:58435446-58435465 Msa0173280:intron 45.0%
ATCCAAAAGGGGAGGGAATT+TGG + chr1_4:58435518-58435537 Msa0173280:intron 45.0%
! AACCAAATTCCCTCCCCTTT+TGG - chr1_4:58435523-58435542 None:intergenic 45.0%
GACAAGGAAAGACAAGGTTG+TGG + chr1_4:58435602-58435621 Msa0173280:intron 45.0%
GTTGGACTTCTTGAATTGGC+TGG + chr1_4:58435664-58435683 Msa0173280:intron 45.0%
GGGCGCAAATTATCCAAACT+GGG + chr1_4:58436583-58436602 Msa0173280:CDS 45.0%
! AGTCCCGATGAGATTTGCTT+TGG - chr1_4:58436619-58436638 None:intergenic 45.0%
! AGAAGTTGCTGTTGCAAGTC+TGG + chr1_4:58436641-58436660 Msa0173280:CDS 45.0%
CAAAGACTGTCATCTGCCAA+TGG - chr1_4:58437068-58437087 None:intergenic 45.0%
! TGCCTTGTTGCAAAGACTGT+TGG + chr1_4:58437240-58437259 Msa0173280:three_prime_UTR 45.0%
GTTGCAAAGACTGTTGGATG+TGG + chr1_4:58437246-58437265 Msa0173280:three_prime_UTR 45.0%
TATCCACCTGATACAGAAGC+CGG + chr1_4:58437313-58437332 Msa0173280:three_prime_UTR 45.0%
AAATCTCCGGCTTCTGTATC+AGG - chr1_4:58437322-58437341 None:intergenic 45.0%
!! ACAGACTTGCTGCAGAATTG+TGG + chr1_4:58437508-58437527 Msa0173280:three_prime_UTR 45.0%
GAAGGTCGATGCGAGAAAGA+AGG - chr1_4:58431854-58431873 None:intergenic 50.0%
GAGGATAAGAGTGAAGGAGG+AGG + chr1_4:58432092-58432111 Msa0173280:CDS 50.0%
ACCCTGCTGGGTTATATGGT+GGG + chr1_4:58432372-58432391 Msa0173280:intron 50.0%
TCCCACCATATAACCCAGCA+GGG - chr1_4:58432376-58432395 None:intergenic 50.0%
ATCCCACCATATAACCCAGC+AGG - chr1_4:58432377-58432396 None:intergenic 50.0%
CTTACGTTGGTGCAGCTTGT+TGG + chr1_4:58432721-58432740 Msa0173280:intron 50.0%
AAGAAACCCACCACAGCAAC+TGG - chr1_4:58433064-58433083 None:intergenic 50.0%
!! ATTGTTGGTGGTCCCTTGGT+TGG + chr1_4:58433100-58433119 Msa0173280:intron 50.0%
GGCAGCCACTCAGTTACTAT+CGG + chr1_4:58433256-58433275 Msa0173280:intron 50.0%
AGCTGCCGATAGTAACTGAG+TGG - chr1_4:58433264-58433283 None:intergenic 50.0%
AGACACTGAAGTAGGAGGCA+CGG - chr1_4:58433306-58433325 None:intergenic 50.0%
CTACATTGCTTCTGCGTCCA+TGG + chr1_4:58433324-58433343 Msa0173280:CDS 50.0%
! GCGTCCATGGTTTGTCGTAT+TGG + chr1_4:58433337-58433356 Msa0173280:CDS 50.0%
GGGGCTATTGAGAAGCTTTG+TGG + chr1_4:58433368-58433387 Msa0173280:CDS 50.0%
! GAAGCTTTGTGGTGTGGCTT+TGG + chr1_4:58433379-58433398 Msa0173280:CDS 50.0%
! AGCTTTGTGGTGTGGCTTTG+GGG + chr1_4:58433381-58433400 Msa0173280:CDS 50.0%
GGTTGCAAATGAGCGTGACT+GGG + chr1_4:58433403-58433422 Msa0173280:CDS 50.0%
TTTGCTTGTGCAAGTGCGAC+TGG - chr1_4:58433546-58433565 None:intergenic 50.0%
TTTAGGCCGGTCAAGAACAC+CGG - chr1_4:58433974-58433993 None:intergenic 50.0%
AGGTTTGTGACGGTTTAGGC+CGG - chr1_4:58433987-58434006 None:intergenic 50.0%
GGTCTGGAAGCTATCAAGCT+CGG + chr1_4:58434145-58434164 Msa0173280:CDS 50.0%
!! CTCGGCTGGAAAGAGTATCT+AGG + chr1_4:58434163-58434182 Msa0173280:CDS 50.0%
GCAATACTAGCAGGAAGGAC+TGG - chr1_4:58434193-58434212 None:intergenic 50.0%
TCCTTCCTGCTAGTATTGCG+TGG + chr1_4:58434194-58434213 Msa0173280:CDS 50.0%
CCTTCCTGCTAGTATTGCGT+GGG + chr1_4:58434195-58434214 Msa0173280:CDS 50.0%
TCCCTCCTCACTTGTTCTAC+AGG + chr1_4:58434796-58434815 Msa0173280:intron 50.0%
GCCTGTAGAACAAGTGAGGA+GGG - chr1_4:58434800-58434819 None:intergenic 50.0%
AGCCTGTAGAACAAGTGAGG+AGG - chr1_4:58434801-58434820 None:intergenic 50.0%
GGCTTACGTCCATCCATCAT+TGG + chr1_4:58434817-58434836 Msa0173280:intron 50.0%
GCAGCGCATATGATGCAACT+TGG - chr1_4:58436087-58436106 None:intergenic 50.0%
TGCGCTGCGTATATGTATCC+AGG + chr1_4:58436099-58436118 Msa0173280:intron 50.0%
! CTGCAGATTTTGTCACGGCT+AGG + chr1_4:58436537-58436556 Msa0173280:intron 50.0%
GGGGCGCAAATTATCCAAAC+TGG + chr1_4:58436582-58436601 Msa0173280:CDS 50.0%
!! TGGATGATGGGATCCCAGTT+TGG - chr1_4:58436599-58436618 None:intergenic 50.0%
CTGGCAGAGTCTCTAATGCT+TGG + chr1_4:58436660-58436679 Msa0173280:CDS 50.0%
! TATCAGTGGTTGGTGCAGCA+TGG + chr1_4:58436742-58436761 Msa0173280:CDS 50.0%
CAGCATGGATGTTCTGCAGA+TGG + chr1_4:58436757-58436776 Msa0173280:CDS 50.0%
CTTTGCAACAAGGCAGCTAG+TGG - chr1_4:58437235-58437254 None:intergenic 50.0%
GGTCGATGCGAGAAAGAAGG+AGG - chr1_4:58431851-58431870 None:intergenic 55.0%
TATAACCCAGCAGGGTGTGC+CGG - chr1_4:58432368-58432387 None:intergenic 55.0%
GCACACCCTGCTGGGTTATA+TGG + chr1_4:58432368-58432387 Msa0173280:CDS 55.0%
CACCCTGCTGGGTTATATGG+TGG + chr1_4:58432371-58432390 Msa0173280:intron 55.0%
AAGCCTCTTGCCAGTTGCTG+TGG + chr1_4:58433051-58433070 Msa0173280:CDS 55.0%
CTCTTGCCAGTTGCTGTGGT+GGG + chr1_4:58433055-58433074 Msa0173280:intron 55.0%
!! GCTTTGTGGTGTGGCTTTGG+GGG + chr1_4:58433382-58433401 Msa0173280:CDS 55.0%
GGGTTGCAAATGAGCGTGAC+TGG + chr1_4:58433402-58433421 Msa0173280:CDS 55.0%
TGGAAGCTATCAAGCTCGGC+TGG + chr1_4:58434149-58434168 Msa0173280:CDS 55.0%
CCCACGCAATACTAGCAGGA+AGG - chr1_4:58434198-58434217 None:intergenic 55.0%
AGCACCCACGCAATACTAGC+AGG - chr1_4:58434202-58434221 None:intergenic 55.0%
! TTTTCCAGGCTGGGGCAGTT+GGG + chr1_4:58435018-58435037 Msa0173280:intron 55.0%
GGGGAGGGAATTTGGTTGTG+TGG + chr1_4:58435526-58435545 Msa0173280:intron 55.0%
TCTCCGGCTTCTGTATCAGG+TGG - chr1_4:58437319-58437338 None:intergenic 55.0%
CCACCACAGCAACTGGCAAG+AGG - chr1_4:58433057-58433076 None:intergenic 60.0%
CCTCTTGCCAGTTGCTGTGG+TGG + chr1_4:58433054-58433073 Msa0173280:intron 60.0%
TGAGCGTGACTGGGTTGTGC+TGG + chr1_4:58433412-58433431 Msa0173280:CDS 60.0%
! CTTTTCCAGGCTGGGGCAGT+TGG + chr1_4:58435017-58435036 Msa0173280:intron 60.0%
CTACTCCGGCACACCCTGCT+GGG + chr1_4:58432360-58432379 Msa0173280:CDS 65.0%
GCTACTCCGGCACACCCTGC+TGG + chr1_4:58432359-58432378 Msa0173280:CDS 70.0%
CCAACCCAACTGCCCCAGCC+TGG - chr1_4:58435025-58435044 None:intergenic 70.0%
CCAGGCTGGGGCAGTTGGGT+TGG + chr1_4:58435022-58435041 Msa0173280:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 58431499 58437787 58431499 ID=Msa0173280;Name=Msa0173280
chr1_4 mRNA 58431499 58437787 58431499 ID=Msa0173280-mRNA-1;Parent=Msa0173280;Name=Msa0173280-mRNA-1;_AED=0.08;_eAED=0.08;_QI=304|0.91|0.92|1|0.91|0.92|13|573|552
chr1_4 exon 58431499 58431936 58431499 ID=Msa0173280-mRNA-1:exon:18111;Parent=Msa0173280-mRNA-1
chr1_4 exon 58432022 58432241 58432022 ID=Msa0173280-mRNA-1:exon:18112;Parent=Msa0173280-mRNA-1
chr1_4 exon 58432326 58432389 58432326 ID=Msa0173280-mRNA-1:exon:18113;Parent=Msa0173280-mRNA-1
chr1_4 exon 58432966 58433072 58432966 ID=Msa0173280-mRNA-1:exon:18114;Parent=Msa0173280-mRNA-1
chr1_4 exon 58433257 58433433 58433257 ID=Msa0173280-mRNA-1:exon:18115;Parent=Msa0173280-mRNA-1
chr1_4 exon 58433525 58433599 58433525 ID=Msa0173280-mRNA-1:exon:18116;Parent=Msa0173280-mRNA-1
chr1_4 exon 58433741 58433842 58433741 ID=Msa0173280-mRNA-1:exon:18117;Parent=Msa0173280-mRNA-1
chr1_4 exon 58433937 58434054 58433937 ID=Msa0173280-mRNA-1:exon:18118;Parent=Msa0173280-mRNA-1
chr1_4 exon 58434137 58434283 58434137 ID=Msa0173280-mRNA-1:exon:18119;Parent=Msa0173280-mRNA-1
chr1_4 exon 58434818 58434924 58434818 ID=Msa0173280-mRNA-1:exon:18120;Parent=Msa0173280-mRNA-1
chr1_4 exon 58435026 58435139 58435026 ID=Msa0173280-mRNA-1:exon:18121;Parent=Msa0173280-mRNA-1
chr1_4 exon 58436543 58436843 58436543 ID=Msa0173280-mRNA-1:exon:18122;Parent=Msa0173280-mRNA-1
chr1_4 exon 58437222 58437787 58437222 ID=Msa0173280-mRNA-1:exon:18123;Parent=Msa0173280-mRNA-1
chr1_4 five_prime_UTR 58431499 58431802 58431499 ID=Msa0173280-mRNA-1:five_prime_utr;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58431803 58431936 58431803 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58432022 58432241 58432022 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58432326 58432389 58432326 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58432966 58433072 58432966 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58433257 58433433 58433257 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58433525 58433599 58433525 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58433741 58433842 58433741 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58433937 58434054 58433937 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58434137 58434283 58434137 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58434818 58434924 58434818 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58435026 58435139 58435026 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 CDS 58436543 58436836 58436543 ID=Msa0173280-mRNA-1:cds;Parent=Msa0173280-mRNA-1
chr1_4 three_prime_UTR 58436837 58436843 58436837 ID=Msa0173280-mRNA-1:three_prime_utr;Parent=Msa0173280-mRNA-1
chr1_4 three_prime_UTR 58437222 58437787 58437222 ID=Msa0173280-mRNA-1:three_prime_utr;Parent=Msa0173280-mRNA-1
Gene Sequence

>Msa0173280

ATGGTTATTGCTTCGCCCTCCTTTAATCTCATCCATTTCACCATTCCTCCTTCTTTCTCGCATCGACCTTCTTCGAGATTACGCTATCGCTGTAAACGATTAAACCTCAATTACTACCCTTCTATCACTCAGAGATTTGCTTGTATAAGTTCCAGATGTTCGATAACGAATACTGATATACAATTGGAATTGGATCATGTAAACGAGGATAAGAGTGAAGGAGGAGGGTGTGCAATTGTTGAACCTGAATGTCCTGTGCCGATTAAAATCAATACTGATATTCTGGTGGAGAATGATTCTTTGAACTTACTCTCTGAAACCGCCTTTGTAGATACTGTCTTGACATCCTTACCTGTTTTGTCTGAAGAGGAACAACATGTTCTTGCAGCTACTCCGGCACACCCTGCTGGGTTATATGCTTTCTATTCTAGTTGCATTGTTGCAAATTTTGTGGAGCAGCTTTGGACTTTTGCTTGGCCTTCTGCCATTGCCTTGATTCATTCAAGCCTCTTGCCAGTTGCTGTGGCAGCCACTCAGTTACTATCGGCAGCTATGATTATACATGCTCATTCCGTGCCTCCTACTTCAGTGTCTACATTGCTTCTGCGTCCATGGTTTGTCGTATTGGTTTCAGCTGGGGCTATTGAGAAGCTTTGTGGTGTGGCTTTGGGGGTTGCAAATGAGCGTGACTGGGTTGTGCTGCTGACAGGAGTTAATAGGCCAGTCGCACTTGCACAAGCAAATGCTGTTCTAAATCGAATTGATCTGTTATCTGAGATAGCTGGAGCATTGCTGTTTGGAGTCCTTCTTTCCAAATTTCATCCTGTAATCTGCTTAAAAGTTGCTTCTGGCTTAATGATGGGACTACTGCCTGTTACAATTATTTTAACATGTTTAACCAACAAGCTTTCTACCGGTGTTCTTGACCGGCCTAAACCGTCACAAACCTGTTGCAGATCATTCGATGAAGATTCTGCATCAGATGCTGACAGTATAGTTGTTAAAGGTCTGGAAGCTATCAAGCTCGGCTGGAAAGAGTATCTAGGTCAGCCAGTCCTTCCTGCTAGTATTGCGTGGGTGCTTCTCTACTTCAATATTGTTCTTACACCAGGCAGTTTGATGACAGCATTTTTAACACAGCATGGCTTACGTCCATCCATCATTGGAGGATTTAGCGGAATGTGTGCTTTTATGGGTGTTGCAGCAACATTCGTCTCTTCGACTCTGGTCAAGCAATTTGGCATTTTAAAGGCTGGGGCAGTTGGGTTGGTGTTTCAAGCTTTATTTCTCAGCATGGCTGTTGCTGTATATATGAGTGGATCAATATCACATCAGAGTCCTCTTCTCCTTTTCTTGTTTCTGATTATTTTGTCACGGCTAGGACACATGTCATATGATGTTGTAGGGGCGCAAATTATCCAAACTGGGATCCCATCATCCAAAGCAAATCTCATCGGGACTACAGAAGTTGCTGTTGCAAGTCTGGCAGAGTCTCTAATGCTTGGTGTTGCAATAATCGCAAACGATCCTTCTCATTTTGGATGTTTAGCAATGTTGTCTCTTCTATCAGTGGTTGGTGCAGCATGGATGTTCTGCAGATGGTTGTCAAATCCAACAGACGAACAAAAAAGCCTTTTCTCTTATCATCCTCAGTTTTGA
Protein sequence

>Msa0173280

MVIASPSFNLIHFTIPPSFSHRPSSRLRYRCKRLNLNYYPSITQRFACISSRCSITNTDIQLELDHVNEDKSEGGGCAIVEPECPVPIKINTDILVENDSLNLLSETAFVDTVLTSLPVLSEEEQHVLAATPAHPAGLYAFYSSCIVANFVEQLWTFAWPSAIALIHSSLLPVAVAATQLLSAAMIIHAHSVPPTSVSTLLLRPWFVVLVSAGAIEKLCGVALGVANERDWVVLLTGVNRPVALAQANAVLNRIDLLSEIAGALLFGVLLSKFHPVICLKVASGLMMGLLPVTIILTCLTNKLSTGVLDRPKPSQTCCRSFDEDSASDADSIVVKGLEAIKLGWKEYLGQPVLPASIAWVLLYFNIVLTPGSLMTAFLTQHGLRPSIIGGFSGMCAFMGVAATFVSSTLVKQFGILKAGAVGLVFQALFLSMAVAVYMSGSISHQSPLLLFLFLIILSRLGHMSYDVVGAQIIQTGIPSSKANLIGTTEVAVASLAESLMLGVAIIANDPSHFGCLAMLSLLSVVGAAWMFCRWLSNPTDEQKSLFSYHPQF*