Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281650 | XP_003627754.1 | 96.065 | 432 | 17 | 0 | 1 | 432 | 1 | 432 | 0.0 | 862 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281650 | sp|Q9SXD5|GSXL3_ARATH | 54.673 | 428 | 181 | 5 | 4 | 421 | 13 | 437 | 1.28e-163 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281650 | G7LEJ5 | 96.065 | 432 | 17 | 0 | 1 | 432 | 1 | 432 | 0.0 | 862 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1281650 | -0.819239 | 1.289253e-52 | -8.615850e-47 |
| Msa0024650 | Msa1281650 | 0.806760 | 7.034277e-50 | -8.615850e-47 |
| Msa0025570 | Msa1281650 | 0.806010 | 1.012183e-49 | -8.615850e-47 |
| Msa0027020 | Msa1281650 | -0.808695 | 2.730064e-50 | -8.615850e-47 |
| Msa0042210 | Msa1281650 | -0.801686 | 8.009485e-49 | -8.615850e-47 |
| Msa0047560 | Msa1281650 | -0.805145 | 1.537679e-49 | -8.615850e-47 |
| Msa0070120 | Msa1281650 | 0.820281 | 7.451163e-53 | -8.615850e-47 |
| Msa0073110 | Msa1281650 | 0.816436 | 5.537026e-52 | -8.615850e-47 |
| Msa0075080 | Msa1281650 | -0.801577 | 8.431083e-49 | -8.615850e-47 |
| Msa0080100 | Msa1281650 | -0.821700 | 3.512929e-53 | -8.615850e-47 |
| Msa0093360 | Msa1281650 | -0.801282 | 9.692080e-49 | -8.615850e-47 |
| Msa0095910 | Msa1281650 | 0.812408 | 4.304586e-51 | -8.615850e-47 |
| Msa0098380 | Msa1281650 | 0.807155 | 5.803047e-50 | -8.615850e-47 |
| Msa0106540 | Msa1281650 | 0.810856 | 9.361973e-51 | -8.615850e-47 |
| Msa0107830 | Msa1281650 | 0.817342 | 3.465333e-52 | -8.615850e-47 |
| Msa0117650 | Msa1281650 | 0.821612 | 3.681188e-53 | -8.615850e-47 |
| Msa0120450 | Msa1281650 | 0.822117 | 2.811443e-53 | -8.615850e-47 |
| Msa0603310 | Msa1281650 | 0.813004 | 3.187165e-51 | -8.615850e-47 |
| Msa0604280 | Msa1281650 | 0.803062 | 4.169645e-49 | -8.615850e-47 |
| Msa0605150 | Msa1281650 | -0.807261 | 5.511727e-50 | -8.615850e-47 |
| Msa0614960 | Msa1281650 | 0.807247 | 5.547471e-50 | -8.615850e-47 |
| Msa0615070 | Msa1281650 | 0.801386 | 9.226447e-49 | -8.615850e-47 |
| Msa0622800 | Msa1281650 | -0.802857 | 4.597997e-49 | -8.615850e-47 |
| Msa0624360 | Msa1281650 | -0.804578 | 2.019710e-49 | -8.615850e-47 |
| Msa0628200 | Msa1281650 | 0.812470 | 4.171036e-51 | -8.615850e-47 |
| Msa0637590 | Msa1281650 | 0.807052 | 6.101255e-50 | -8.615850e-47 |
| Msa0637700 | Msa1281650 | 0.821785 | 3.356537e-53 | -8.615850e-47 |
| Msa0655370 | Msa1281650 | 0.827195 | 1.789026e-54 | -8.615850e-47 |
| Msa0673620 | Msa1281650 | -0.805567 | 1.254530e-49 | -8.615850e-47 |
| Msa0682110 | Msa1281650 | 0.824493 | 7.833352e-54 | -8.615850e-47 |
| Msa0682160 | Msa1281650 | 0.813931 | 1.993520e-51 | -8.615850e-47 |
| Msa0694320 | Msa1281650 | 0.802023 | 6.830552e-49 | -8.615850e-47 |
| Msa0699170 | Msa1281650 | 0.833320 | 5.707924e-56 | -8.615850e-47 |
| Msa0718770 | Msa1281650 | 0.834032 | 3.788814e-56 | -8.615850e-47 |
| Msa0719860 | Msa1281650 | 0.816899 | 4.359184e-52 | -8.615850e-47 |
| Msa0727230 | Msa1281650 | 0.803643 | 3.161410e-49 | -8.615850e-47 |
| Msa0731580 | Msa1281650 | 0.801921 | 7.167412e-49 | -8.615850e-47 |
| Msa0733560 | Msa1281650 | 0.809712 | 1.652011e-50 | -8.615850e-47 |
| Msa0751510 | Msa1281650 | 0.832079 | 1.159630e-55 | -8.615850e-47 |
| Msa0766910 | Msa1281650 | -0.805347 | 1.394931e-49 | -8.615850e-47 |
| Msa0795320 | Msa1281650 | 0.806563 | 7.742639e-50 | -8.615850e-47 |
| Msa0802600 | Msa1281650 | 0.834322 | 3.204718e-56 | -8.615850e-47 |
| Msa0827800 | Msa1281650 | 0.803176 | 3.950626e-49 | -8.615850e-47 |
| Msa0829990 | Msa1281650 | 0.835215 | 1.910438e-56 | -8.615850e-47 |
| Msa0841520 | Msa1281650 | 0.811795 | 5.855015e-51 | -8.615850e-47 |
| Msa0141410 | Msa1281650 | 0.807514 | 4.869520e-50 | -8.615850e-47 |
| Msa0150620 | Msa1281650 | 0.812888 | 3.379060e-51 | -8.615850e-47 |
| Msa0163690 | Msa1281650 | 0.826623 | 2.450985e-54 | -8.615850e-47 |
| Msa0167160 | Msa1281650 | -0.805377 | 1.374680e-49 | -8.615850e-47 |
| Msa0185040 | Msa1281650 | 0.812746 | 3.630602e-51 | -8.615850e-47 |
| Msa0186240 | Msa1281650 | 0.808205 | 3.472703e-50 | -8.615850e-47 |
| Msa0191470 | Msa1281650 | 0.803709 | 3.062878e-49 | -8.615850e-47 |
| Msa0196580 | Msa1281650 | -0.807597 | 4.677264e-50 | -8.615850e-47 |
| Msa0211460 | Msa1281650 | 0.810090 | 1.370135e-50 | -8.615850e-47 |
| Msa0238460 | Msa1281650 | -0.817374 | 3.409155e-52 | -8.615850e-47 |
| Msa1228260 | Msa1281650 | -0.802327 | 5.912160e-49 | -8.615850e-47 |
| Msa1239190 | Msa1281650 | 0.809735 | 1.633568e-50 | -8.615850e-47 |
| Msa1239210 | Msa1281650 | 0.818099 | 2.338986e-52 | -8.615850e-47 |
| Msa1254870 | Msa1281650 | 0.819514 | 1.115943e-52 | -8.615850e-47 |
| Msa1259570 | Msa1281650 | 0.801157 | 1.027731e-48 | -8.615850e-47 |
| Msa1263110 | Msa1281650 | 0.807302 | 5.402265e-50 | -8.615850e-47 |
| Msa1271220 | Msa1281650 | -0.802108 | 6.560921e-49 | -8.615850e-47 |
| Msa1279060 | Msa1281650 | 0.820002 | 8.633716e-53 | -8.615850e-47 |
| Msa1280530 | Msa1281650 | 0.817204 | 3.722019e-52 | -8.615850e-47 |
| Msa1281650 | Msa1317740 | 0.801583 | 8.409955e-49 | -8.615850e-47 |
| Msa1281650 | Msa1319760 | 0.808580 | 2.888626e-50 | -8.615850e-47 |
| Msa1281650 | Msa1328430 | 0.820772 | 5.749023e-53 | -8.615850e-47 |
| Msa1281650 | Msa1332420 | 0.803871 | 2.835068e-49 | -8.615850e-47 |
| Msa1281650 | Msa1333880 | 0.800768 | 1.234436e-48 | -8.615850e-47 |
| Msa1281650 | Msa1357570 | 0.801380 | 9.253275e-49 | -8.615850e-47 |
| Msa1281650 | Msa1361980 | 0.802094 | 6.602728e-49 | -8.615850e-47 |
| Msa1281650 | Msa1363170 | -0.801714 | 7.904126e-49 | -8.615850e-47 |
| Msa1281650 | Msa1364690 | 0.817947 | 2.530901e-52 | -8.615850e-47 |
| Msa1281650 | Msa1368420 | 0.801300 | 9.608086e-49 | -8.615850e-47 |
| Msa1281650 | Msa1383220 | 0.802618 | 5.150213e-49 | -8.615850e-47 |
| Msa1281650 | Msa1398140 | 0.803985 | 2.683713e-49 | -8.615850e-47 |
| Msa1281650 | Msa1399030 | 0.807414 | 5.113099e-50 | -8.615850e-47 |
| Msa1281650 | Msa1405040 | -0.823183 | 1.588667e-53 | -8.615850e-47 |
| Msa1281650 | Msa1405830 | 0.810206 | 1.293340e-50 | -8.615850e-47 |
| Msa1281650 | Msa1407810 | 0.807713 | 4.418119e-50 | -8.615850e-47 |
| Msa1281650 | Msa1437590 | 0.811080 | 8.372923e-51 | -8.615850e-47 |
| Msa1281650 | Msa1437780 | 0.807779 | 4.278421e-50 | -8.615850e-47 |
| Msa1281650 | Msa1453890 | 0.816114 | 6.534173e-52 | -8.615850e-47 |
| Msa1281650 | Msa1455200 | 0.805108 | 1.565044e-49 | -8.615850e-47 |
| Msa1281650 | Msa1458270 | 0.805388 | 1.367488e-49 | -8.615850e-47 |
| Msa1281650 | Msa1462700 | -0.816042 | 6.781824e-52 | -8.615850e-47 |
| Msa1281650 | Msa1463640 | 0.805331 | 1.405420e-49 | -8.615850e-47 |
| Msa0369990 | Msa1281650 | 0.806565 | 7.733458e-50 | -8.615850e-47 |
| Msa0374470 | Msa1281650 | 0.805206 | 1.493262e-49 | -8.615850e-47 |
| Msa0374560 | Msa1281650 | 0.801982 | 6.963567e-49 | -8.615850e-47 |
| Msa0374600 | Msa1281650 | 0.800978 | 1.118445e-48 | -8.615850e-47 |
| Msa0380470 | Msa1281650 | -0.805226 | 1.478891e-49 | -8.615850e-47 |
| Msa0382050 | Msa1281650 | -0.815784 | 7.741537e-52 | -8.615850e-47 |
| Msa0384140 | Msa1281650 | -0.800158 | 1.643381e-48 | -8.615850e-47 |
| Msa0386910 | Msa1281650 | 0.806975 | 6.335231e-50 | -8.615850e-47 |
| Msa0390200 | Msa1281650 | 0.813043 | 3.124569e-51 | -8.615850e-47 |
| Msa0405200 | Msa1281650 | 0.819353 | 1.214570e-52 | -8.615850e-47 |
| Msa0405210 | Msa1281650 | 0.816744 | 4.723506e-52 | -8.615850e-47 |
| Msa0431550 | Msa1281650 | -0.810163 | 1.321232e-50 | -8.615850e-47 |
| Msa0434300 | Msa1281650 | 0.808719 | 2.697983e-50 | -8.615850e-47 |
| Msa0434400 | Msa1281650 | 0.806827 | 6.809102e-50 | -8.615850e-47 |
| Msa0449490 | Msa1281650 | 0.820867 | 5.467520e-53 | -8.615850e-47 |
| Msa0454770 | Msa1281650 | 0.807379 | 5.201279e-50 | -8.615850e-47 |
| Msa0473740 | Msa1281650 | -0.801789 | 7.626988e-49 | -8.615850e-47 |
| Msa0474660 | Msa1281650 | -0.817413 | 3.340569e-52 | -8.615850e-47 |
| Msa0478080 | Msa1281650 | 0.804085 | 2.558139e-49 | -8.615850e-47 |
| Msa0984230 | Msa1281650 | -0.800879 | 1.171604e-48 | -8.615850e-47 |
| Msa0993710 | Msa1281650 | 0.800411 | 1.459873e-48 | -8.615850e-47 |
| Msa1007900 | Msa1281650 | 0.808053 | 3.741141e-50 | -8.615850e-47 |
| Msa1024480 | Msa1281650 | 0.800539 | 1.374678e-48 | -8.615850e-47 |
| Msa1029840 | Msa1281650 | 0.803010 | 4.275558e-49 | -8.615850e-47 |
| Msa1029860 | Msa1281650 | 0.822553 | 2.227114e-53 | -8.615850e-47 |
| Msa1030210 | Msa1281650 | 0.801736 | 7.820798e-49 | -8.615850e-47 |
| Msa1031190 | Msa1281650 | -0.804280 | 2.330551e-49 | -8.615850e-47 |
| Msa1035050 | Msa1281650 | 0.827463 | 1.542669e-54 | -8.615850e-47 |
| Msa1036260 | Msa1281650 | -0.808519 | 2.975844e-50 | -8.615850e-47 |
| Msa1062060 | Msa1281650 | 0.810145 | 1.332932e-50 | -8.615850e-47 |
| Msa1069250 | Msa1281650 | 0.803761 | 2.987181e-49 | -8.615850e-47 |
| Msa1070370 | Msa1281650 | -0.803747 | 3.007914e-49 | -8.615850e-47 |
| Msa1071350 | Msa1281650 | 0.810042 | 1.402879e-50 | -8.615850e-47 |
| Msa1075090 | Msa1281650 | 0.813144 | 2.969200e-51 | -8.615850e-47 |
| Msa1078120 | Msa1281650 | -0.818881 | 1.555184e-52 | -8.615850e-47 |
| Msa1085820 | Msa1281650 | 0.804278 | 2.332242e-49 | -8.615850e-47 |
| Msa1102410 | Msa1281650 | -0.803850 | 2.863343e-49 | -8.615850e-47 |
| Msa0244310 | Msa1281650 | 0.802004 | 6.892205e-49 | -8.615850e-47 |
| Msa0253230 | Msa1281650 | -0.806755 | 7.051798e-50 | -8.615850e-47 |
| Msa0257760 | Msa1281650 | 0.800997 | 1.108511e-48 | -8.615850e-47 |
| Msa0261020 | Msa1281650 | -0.817628 | 2.987640e-52 | -8.615850e-47 |
| Msa0269710 | Msa1281650 | 0.804751 | 1.858184e-49 | -8.615850e-47 |
| Msa0270730 | Msa1281650 | -0.801124 | 1.044032e-48 | -8.615850e-47 |
| Msa0275730 | Msa1281650 | 0.808472 | 3.045442e-50 | -8.615850e-47 |
| Msa0275980 | Msa1281650 | -0.809508 | 1.828010e-50 | -8.615850e-47 |
| Msa0279810 | Msa1281650 | 0.816307 | 5.915460e-52 | -8.615850e-47 |
| Msa0310190 | Msa1281650 | 0.808467 | 3.053861e-50 | -8.615850e-47 |
| Msa0312300 | Msa1281650 | 0.812118 | 4.979180e-51 | -8.615850e-47 |
| Msa0316080 | Msa1281650 | -0.811594 | 6.476560e-51 | -8.615850e-47 |
| Msa0319220 | Msa1281650 | 0.812498 | 4.113656e-51 | -8.615850e-47 |
| Msa0319680 | Msa1281650 | 0.804661 | 1.940425e-49 | -8.615850e-47 |
| Msa0321240 | Msa1281650 | 0.817226 | 3.679592e-52 | -8.615850e-47 |
| Msa0331190 | Msa1281650 | 0.800756 | 1.241392e-48 | -8.615850e-47 |
| Msa0336550 | Msa1281650 | -0.804723 | 1.883772e-49 | -8.615850e-47 |
| Msa0345050 | Msa1281650 | 0.836709 | 7.983211e-57 | -8.615850e-47 |
| Msa0345890 | Msa1281650 | 0.805674 | 1.191280e-49 | -8.615850e-47 |
| Msa0346170 | Msa1281650 | 0.812996 | 3.200821e-51 | -8.615850e-47 |
| Msa1107220 | Msa1281650 | 0.818522 | 1.876304e-52 | -8.615850e-47 |
| Msa1107250 | Msa1281650 | 0.800900 | 1.160092e-48 | -8.615850e-47 |
| Msa1108560 | Msa1281650 | 0.817172 | 3.784121e-52 | -8.615850e-47 |
| Msa1110900 | Msa1281650 | 0.806657 | 7.397151e-50 | -8.615850e-47 |
| Msa1120960 | Msa1281650 | 0.854368 | 1.289434e-61 | -8.615850e-47 |
| Msa1123260 | Msa1281650 | -0.808275 | 3.354564e-50 | -8.615850e-47 |
| Msa1131120 | Msa1281650 | 0.816203 | 6.241234e-52 | -8.615850e-47 |
| Msa1131300 | Msa1281650 | -0.827831 | 1.258721e-54 | -8.615850e-47 |
| Msa1136630 | Msa1281650 | 0.812318 | 4.503647e-51 | -8.615850e-47 |
| Msa1136760 | Msa1281650 | 0.808264 | 3.373725e-50 | -8.615850e-47 |
| Msa1158180 | Msa1281650 | -0.802386 | 5.751515e-49 | -8.615850e-47 |
| Msa1161060 | Msa1281650 | -0.816980 | 4.181165e-52 | -8.615850e-47 |
| Msa1185270 | Msa1281650 | 0.824662 | 7.150168e-54 | -8.615850e-47 |
| Msa1186150 | Msa1281650 | 0.886216 | 4.147892e-72 | -8.615850e-47 |
| Msa1191270 | Msa1281650 | 0.817326 | 3.495151e-52 | -8.615850e-47 |
| Msa1202110 | Msa1281650 | 0.818198 | 2.221337e-52 | -8.615850e-47 |
| Msa1203320 | Msa1281650 | -0.812915 | 3.334061e-51 | -8.615850e-47 |
| Msa1206330 | Msa1281650 | 0.811817 | 5.790074e-51 | -8.615850e-47 |
| Msa1206380 | Msa1281650 | 0.815738 | 7.927856e-52 | -8.615850e-47 |
| Msa1215740 | Msa1281650 | 0.808422 | 3.121852e-50 | -8.615850e-47 |
| Msa1222900 | Msa1281650 | -0.800325 | 1.519441e-48 | -8.615850e-47 |
| Msa1223990 | Msa1281650 | 0.800032 | 1.743471e-48 | -8.615850e-47 |
| Msa0492330 | Msa1281650 | -0.808856 | 2.521252e-50 | -8.615850e-47 |
| Msa0497680 | Msa1281650 | 0.811637 | 6.337664e-51 | -8.615850e-47 |
| Msa0500580 | Msa1281650 | -0.807838 | 4.157505e-50 | -8.615850e-47 |
| Msa0506700 | Msa1281650 | -0.800261 | 1.565565e-48 | -8.615850e-47 |
| Msa0512280 | Msa1281650 | 0.800501 | 1.398922e-48 | -8.615850e-47 |
| Msa0517260 | Msa1281650 | 0.864314 | 1.328926e-64 | -8.615850e-47 |
| Msa0522140 | Msa1281650 | 0.808490 | 3.018487e-50 | -8.615850e-47 |
| Msa0522170 | Msa1281650 | 0.813407 | 2.599966e-51 | -8.615850e-47 |
| Msa0524710 | Msa1281650 | 0.812527 | 4.053924e-51 | -8.615850e-47 |
| Msa0531050 | Msa1281650 | 0.825411 | 4.756220e-54 | -8.615850e-47 |
| Msa0546590 | Msa1281650 | 0.818566 | 1.833444e-52 | -8.615850e-47 |
| Msa0561830 | Msa1281650 | 0.810709 | 1.007407e-50 | -8.615850e-47 |
| Msa0567330 | Msa1281650 | 0.804464 | 2.133257e-49 | -8.615850e-47 |
| Msa0567570 | Msa1281650 | 0.805452 | 1.326122e-49 | -8.615850e-47 |
| Msa0576320 | Msa1281650 | 0.805497 | 1.297330e-49 | -8.615850e-47 |
| Msa0597800 | Msa1281650 | 0.815312 | 9.859287e-52 | -8.615850e-47 |
| Msa0597820 | Msa1281650 | 0.808068 | 3.713680e-50 | -8.615850e-47 |
| Msa0848270 | Msa1281650 | 0.802947 | 4.404487e-49 | -8.615850e-47 |
| Msa0854230 | Msa1281650 | 0.817199 | 3.732576e-52 | -8.615850e-47 |
| Msa0868500 | Msa1281650 | -0.801505 | 8.722380e-49 | -8.615850e-47 |
| Msa0868510 | Msa1281650 | -0.805663 | 1.197676e-49 | -8.615850e-47 |
| Msa0868520 | Msa1281650 | -0.803898 | 2.797635e-49 | -8.615850e-47 |
| Msa0873910 | Msa1281650 | 0.807481 | 4.949838e-50 | -8.615850e-47 |
| Msa0874750 | Msa1281650 | 0.811299 | 7.505765e-51 | -8.615850e-47 |
| Msa0906660 | Msa1281650 | 0.817443 | 3.289144e-52 | -8.615850e-47 |
| Msa0933320 | Msa1281650 | -0.800740 | 1.250657e-48 | -8.615850e-47 |
| Msa0935840 | Msa1281650 | -0.822532 | 2.252024e-53 | -8.615850e-47 |
| Msa0941420 | Msa1281650 | -0.813433 | 2.566538e-51 | -8.615850e-47 |
| Msa0964400 | Msa1281650 | -0.808067 | 3.715675e-50 | -8.615850e-47 |
| Msa0968990 | Msa1281650 | 0.817114 | 3.900777e-52 | -8.615850e-47 |
| Msa0973010 | Msa1281650 | -0.839525 | 1.504243e-57 | -8.615850e-47 |
| Msa0978540 | Msa1281650 | -0.815441 | 9.232685e-52 | -8.615850e-47 |
| Msa0978550 | Msa1281650 | -0.808537 | 2.950446e-50 | -8.615850e-47 |
| Msa0978560 | Msa1281650 | -0.809275 | 2.050367e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281650 | MtrunA17_Chr8g0352461 | 96.065 | 432 | 17 | 0 | 1 | 432 | 1 | 432 | 0.0 | 862 |
| Msa1281650 | MtrunA17_Chr8g0352481 | 87.731 | 432 | 52 | 1 | 1 | 432 | 1 | 431 | 0.0 | 790 |
| Msa1281650 | MtrunA17_Chr5g0399001 | 54.292 | 431 | 187 | 4 | 4 | 427 | 33 | 460 | 1.21e-160 | 461 |
| Msa1281650 | MtrunA17_Chr3g0091441 | 42.664 | 443 | 231 | 8 | 4 | 432 | 13 | 446 | 7.89e-118 | 352 |
| Msa1281650 | MtrunA17_Chr7g0268621 | 24.199 | 281 | 173 | 6 | 4 | 279 | 6 | 251 | 1.24e-17 | 84.3 |
| Msa1281650 | MtrunA17_Chr1g0148801 | 24.658 | 219 | 136 | 6 | 6 | 223 | 18 | 208 | 2.55e-17 | 83.6 |
| Msa1281650 | MtrunA17_Chr3g0139441 | 27.143 | 210 | 124 | 6 | 6 | 212 | 41 | 224 | 2.64e-17 | 83.6 |
| Msa1281650 | MtrunA17_Chr2g0304651 | 26.482 | 253 | 129 | 8 | 3 | 222 | 4 | 232 | 1.48e-15 | 78.6 |
| Msa1281650 | MtrunA17_Chr7g0268611 | 23.431 | 239 | 150 | 6 | 3 | 236 | 7 | 217 | 9.12e-15 | 75.5 |
| Msa1281650 | MtrunA17_Chr2g0301471 | 27.404 | 208 | 100 | 7 | 3 | 184 | 13 | 195 | 2.27e-14 | 75.1 |
| Msa1281650 | MtrunA17_Chr2g0304721 | 26.087 | 253 | 130 | 8 | 3 | 222 | 4 | 232 | 2.41e-14 | 75.1 |
| Msa1281650 | MtrunA17_Chr2g0305211 | 25.207 | 242 | 124 | 8 | 4 | 212 | 5 | 222 | 4.14e-14 | 74.3 |
| Msa1281650 | MtrunA17_Chr2g0305231 | 25.207 | 242 | 124 | 8 | 4 | 212 | 5 | 222 | 4.14e-14 | 74.3 |
| Msa1281650 | MtrunA17_Chr2g0301661 | 27.885 | 208 | 99 | 7 | 3 | 184 | 13 | 195 | 1.03e-13 | 72.8 |
| Msa1281650 | MtrunA17_Chr1g0147221 | 24.402 | 209 | 130 | 6 | 6 | 212 | 44 | 226 | 1.55e-12 | 68.9 |
| Msa1281650 | MtrunA17_Chr5g0412881 | 25.238 | 210 | 130 | 5 | 4 | 211 | 6 | 190 | 2.61e-12 | 68.2 |
| Msa1281650 | MtrunA17_Chr2g0286701 | 24.691 | 243 | 126 | 8 | 3 | 213 | 13 | 230 | 1.47e-11 | 65.1 |
| Msa1281650 | MtrunA17_Chr8g0350371 | 22.072 | 222 | 146 | 5 | 4 | 223 | 6 | 202 | 2.22e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1281650 | AT1G62620.1 | 54.673 | 428 | 181 | 5 | 4 | 421 | 13 | 437 | 1.30e-164 | 471 |
| Msa1281650 | AT1G63370.1 | 54.206 | 428 | 183 | 5 | 4 | 421 | 13 | 437 | 8.69e-163 | 466 |
| Msa1281650 | AT1G12140.1 | 53.882 | 425 | 190 | 3 | 2 | 421 | 11 | 434 | 9.38e-157 | 451 |
| Msa1281650 | AT1G12140.3 | 53.882 | 425 | 190 | 3 | 2 | 421 | 11 | 434 | 9.38e-157 | 451 |
| Msa1281650 | AT1G12200.1 | 53.037 | 428 | 190 | 4 | 4 | 421 | 14 | 440 | 8.25e-156 | 449 |
| Msa1281650 | AT1G62600.1 | 52.693 | 427 | 193 | 3 | 4 | 421 | 13 | 439 | 7.74e-154 | 443 |
| Msa1281650 | AT1G12140.2 | 53.412 | 425 | 190 | 4 | 2 | 421 | 11 | 432 | 3.17e-153 | 442 |
| Msa1281650 | AT1G62620.2 | 57.067 | 375 | 154 | 3 | 4 | 371 | 13 | 387 | 2.73e-151 | 435 |
| Msa1281650 | AT1G12160.1 | 49.886 | 439 | 195 | 6 | 4 | 420 | 12 | 447 | 1.01e-149 | 434 |
| Msa1281650 | AT1G65860.1 | 50.711 | 422 | 202 | 4 | 4 | 420 | 13 | 433 | 1.08e-149 | 433 |
| Msa1281650 | AT1G62560.1 | 49.289 | 422 | 209 | 3 | 4 | 420 | 13 | 434 | 6.83e-148 | 429 |
| Msa1281650 | AT1G12130.1 | 52.000 | 450 | 185 | 8 | 4 | 429 | 13 | 455 | 1.10e-146 | 426 |
| Msa1281650 | AT1G62580.2 | 52.471 | 425 | 194 | 5 | 4 | 421 | 14 | 437 | 4.57e-146 | 424 |
| Msa1281650 | AT1G62540.1 | 52.133 | 422 | 196 | 4 | 4 | 420 | 13 | 433 | 2.90e-145 | 422 |
| Msa1281650 | AT1G62570.1 | 51.300 | 423 | 198 | 5 | 4 | 420 | 13 | 433 | 2.51e-144 | 419 |
| Msa1281650 | AT1G62600.2 | 55.172 | 377 | 160 | 3 | 4 | 371 | 13 | 389 | 5.11e-142 | 411 |
| Msa1281650 | AT1G62540.2 | 49.441 | 447 | 195 | 5 | 4 | 420 | 13 | 458 | 1.82e-141 | 413 |
| Msa1281650 | AT1G62560.2 | 51.724 | 377 | 177 | 3 | 4 | 375 | 13 | 389 | 1.47e-138 | 402 |
| Msa1281650 | AT1G62580.1 | 48.690 | 458 | 194 | 7 | 4 | 421 | 14 | 470 | 1.67e-137 | 404 |
| Msa1281650 | AT1G62540.3 | 49.526 | 422 | 189 | 5 | 4 | 420 | 13 | 415 | 2.28e-132 | 388 |
| Msa1281650 | AT1G63340.1 | 47.518 | 423 | 178 | 4 | 4 | 421 | 14 | 397 | 5.50e-131 | 384 |
| Msa1281650 | AT5G61290.1 | 45.940 | 431 | 214 | 5 | 4 | 420 | 16 | 441 | 2.74e-127 | 376 |
| Msa1281650 | AT1G63370.2 | 57.321 | 321 | 130 | 3 | 4 | 317 | 13 | 333 | 1.60e-126 | 370 |
| Msa1281650 | AT1G12200.2 | 56.522 | 322 | 132 | 2 | 4 | 317 | 14 | 335 | 1.60e-121 | 358 |
| Msa1281650 | AT5G07800.1 | 43.056 | 432 | 229 | 7 | 3 | 420 | 15 | 443 | 1.16e-116 | 349 |
| Msa1281650 | AT1G62580.3 | 54.985 | 331 | 132 | 4 | 4 | 317 | 14 | 344 | 4.57e-111 | 331 |
| Msa1281650 | AT1G63390.1 | 59.441 | 143 | 51 | 2 | 4 | 139 | 13 | 155 | 2.34e-43 | 150 |
| Msa1281650 | AT1G19250.1 | 29.876 | 241 | 114 | 8 | 3 | 212 | 12 | 228 | 2.59e-17 | 84.7 |
| Msa1281650 | AT5G45180.1 | 24.545 | 440 | 205 | 19 | 3 | 348 | 12 | 418 | 5.09e-17 | 83.2 |
| Msa1281650 | AT5G11320.2 | 23.853 | 218 | 137 | 5 | 6 | 223 | 19 | 207 | 2.37e-15 | 77.4 |
| Msa1281650 | AT5G11320.1 | 23.853 | 218 | 137 | 5 | 6 | 223 | 19 | 207 | 5.48e-15 | 77.0 |
| Msa1281650 | AT4G13260.2 | 24.402 | 209 | 131 | 6 | 6 | 212 | 30 | 213 | 1.03e-13 | 72.0 |
| Msa1281650 | AT4G13260.1 | 24.402 | 209 | 131 | 6 | 6 | 212 | 30 | 213 | 2.69e-13 | 71.6 |
| Msa1281650 | AT5G25620.1 | 23.182 | 220 | 142 | 5 | 6 | 223 | 34 | 228 | 2.16e-12 | 68.9 |
| Msa1281650 | AT5G25620.2 | 22.727 | 220 | 143 | 4 | 6 | 223 | 34 | 228 | 2.30e-12 | 68.9 |
Find 129 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATGTTGATTGTTAAAT+TGG | 0.140900 | 8_3:+21357943 | Msa1281650:three_prime_UTR |
| GAAGTTTGTATTAACCTTAT+AGG | 0.183252 | 8_3:-21357140 | None:intergenic |
| TATCAATCCATGGAGGAAAA+TGG | 0.199770 | 8_3:+21357367 | Msa1281650:CDS |
| TTACTGTTCCATTTGTTTCT+AGG | 0.201456 | 8_3:-21357033 | None:intergenic |
| GAGGATCGGAGTCTGATTTA+TGG | 0.231854 | 8_3:-21354368 | None:intergenic |
| TTTCATTGGTTTAACCTATA+AGG | 0.238314 | 8_3:+21357126 | Msa1281650:CDS |
| CTAAAACAATCTTGTCTTGA+TGG | 0.239083 | 8_3:+21353515 | Msa1281650:exon |
| ATGAATGGGATGATAATTAT+TGG | 0.261638 | 8_3:+21357868 | Msa1281650:CDS |
| CGGTGATCCAAGAACGTTTC+CGG | 0.270104 | 8_3:+21354506 | Msa1281650:CDS |
| CCGAGACTTGCTGTGGTTCC+TGG | 0.308338 | 8_3:+21354726 | Msa1281650:CDS |
| TCATGACCCGGAAACGTTCT+TGG | 0.312023 | 8_3:-21354513 | None:intergenic |
| CTACCCTTCAAATCTGGTTT+CGG | 0.333497 | 8_3:-21356647 | None:intergenic |
| AACTTCCTACCCTTCAAATC+TGG | 0.337087 | 8_3:-21356653 | None:intergenic |
| CTGGTTGGGTCTATGCTTAG+AGG | 0.342999 | 8_3:-21354387 | None:intergenic |
| GACTGCCTCCATTGGAAGAT+TGG | 0.354316 | 8_3:+21357784 | Msa1281650:CDS |
| CCTGGTATTGAAAACTTTAG+TGG | 0.358618 | 8_3:+21354744 | Msa1281650:CDS |
| CACCACCTCCGTTTCAAATC+GGG | 0.359835 | 8_3:-21354592 | None:intergenic |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.361488 | 8_3:-21354402 | None:intergenic |
| AGGATCGGAGTCTGATTTAT+GGG | 0.366595 | 8_3:-21354367 | None:intergenic |
| CAATATATGTTTCCATACTT+TGG | 0.367814 | 8_3:+21356688 | Msa1281650:CDS |
| TTACCCTGTACAGTGAATTA+TGG | 0.368004 | 8_3:-21356870 | None:intergenic |
| TTCATCATCTCTTCTTCATC+AGG | 0.379357 | 8_3:-21357328 | None:intergenic |
| TCACCACCTCCGTTTCAAAT+CGG | 0.383633 | 8_3:-21354593 | None:intergenic |
| GCACCATGGCTCTCTTTCAT+TGG | 0.386501 | 8_3:+21357112 | Msa1281650:CDS |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8_3:-21354401 | None:intergenic |
| CCAATGTTGATTGTTAAATT+GGG | 0.404194 | 8_3:+21357944 | Msa1281650:three_prime_UTR |
| GAAGCGGTTGTTGTGTGTTC+CGG | 0.408735 | 8_3:+21354690 | Msa1281650:CDS |
| CAATCTTCCAAGACATATCA+TGG | 0.411970 | 8_3:+21354449 | Msa1281650:CDS |
| ATCAATCCATGGAGGAAAAT+GGG | 0.434145 | 8_3:+21357368 | Msa1281650:CDS |
| GCCTTCTTGCTGTAGCTCCT+TGG | 0.434476 | 8_3:-21353583 | None:intergenic |
| AGCGAATGAGTTTGACGCTT+GGG | 0.436767 | 8_3:-21357394 | None:intergenic |
| GGTGATCCAAGAACGTTTCC+GGG | 0.437865 | 8_3:+21354507 | Msa1281650:CDS |
| ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8_3:+21356806 | Msa1281650:CDS |
| AGAGGAAAGGAGGGAAGGAG+TGG | 0.442535 | 8_3:+21354622 | Msa1281650:CDS |
| TGGATCACCGGATTCTCGCT+TGG | 0.443511 | 8_3:-21354493 | None:intergenic |
| CGGATTCTCGCTTGGACAAA+GGG | 0.444441 | 8_3:-21354485 | None:intergenic |
| ATTCCTTTCCTAGAAACAAA+TGG | 0.445885 | 8_3:+21357025 | Msa1281650:CDS |
| CCTTTGTCCAAGCGAGAATC+CGG | 0.450017 | 8_3:+21354486 | Msa1281650:CDS |
| ACCTGGTCTTTGAAAGAATG+AGG | 0.454799 | 8_3:-21354798 | None:intergenic |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8_3:+21356827 | Msa1281650:CDS |
| GCTGCTGTGAACTGTTTCTC+TGG | 0.457113 | 8_3:-21354406 | None:intergenic |
| TTGGAGGGACAATATGTTGA+TGG | 0.458426 | 8_3:+21357803 | Msa1281650:CDS |
| ACGAAATGTTTAGAGATGAA+TGG | 0.464789 | 8_3:+21357853 | Msa1281650:CDS |
| CATGATATGTCTTGGAAGAT+TGG | 0.466055 | 8_3:-21354448 | None:intergenic |
| CGAAATGTTTAGAGATGAAT+GGG | 0.466751 | 8_3:+21357854 | Msa1281650:CDS |
| GGAGTGGGTGGTTGAGTCAA+GGG | 0.467215 | 8_3:+21354638 | Msa1281650:CDS |
| GTTCCATTTGTTTCTAGGAA+AGG | 0.468015 | 8_3:-21357028 | None:intergenic |
| TCCTCATTCTTTCAAAGACC+AGG | 0.469778 | 8_3:+21354797 | Msa1281650:CDS |
| CTCCGGTATGGTTGCCGCCA+AGG | 0.471770 | 8_3:+21353566 | Msa1281650:CDS |
| CCCAACACGATTATCTTCAA+TGG | 0.472659 | 8_3:-21357056 | None:intergenic |
| GTGATCGGCGCCGGAGTCTC+CGG | 0.474098 | 8_3:+21353549 | Msa1281650:CDS |
| CCGGATTCTCGCTTGGACAA+AGG | 0.477123 | 8_3:-21354486 | None:intergenic |
| TGAATGGGATGATAATTATT+GGG | 0.478067 | 8_3:+21357869 | Msa1281650:CDS |
| AGGAGTGGGTGGTTGAGTCA+AGG | 0.479745 | 8_3:+21354637 | Msa1281650:CDS |
| AAGACCGAAACCAGATTTGA+AGG | 0.481017 | 8_3:+21356643 | Msa1281650:CDS |
| TGATTTATGGGTGTATATCC+AGG | 0.485907 | 8_3:-21354355 | None:intergenic |
| GAGGAAAGGAGGGAAGGAGT+GGG | 0.487432 | 8_3:+21354623 | Msa1281650:CDS |
| TGAAAGTTGAGAGGAAAGGA+GGG | 0.491312 | 8_3:+21354613 | Msa1281650:CDS |
| ACAGATTGGACTGCCTCCAT+TGG | 0.491471 | 8_3:+21357776 | Msa1281650:CDS |
| AAGAACCCCATGATATGTCT+TGG | 0.495350 | 8_3:-21354456 | None:intergenic |
| GCTGGTGAGTTTGGGATACA+CGG | 0.497630 | 8_3:+21354564 | Msa1281650:CDS |
| GAAAGGAGGGAAGGAGTGGG+TGG | 0.498908 | 8_3:+21354626 | Msa1281650:CDS |
| CTCCTTGGCGGCAACCATAC+CGG | 0.502506 | 8_3:-21353568 | None:intergenic |
| TTCTTGCTGTAGCTCCTTGG+CGG | 0.508210 | 8_3:-21353580 | None:intergenic |
| GTGAAAGTTGAGAGGAAAGG+AGG | 0.518575 | 8_3:+21354612 | Msa1281650:CDS |
| CGGGTTGACCCGATTTGAAA+CGG | 0.522315 | 8_3:+21354584 | Msa1281650:CDS |
| AGCTTGTCATACTCATGGTT+AGG | 0.525599 | 8_3:-21353412 | None:intergenic |
| TACAAGCCAAGTGGATTGCT+AGG | 0.525933 | 8_3:+21357281 | Msa1281650:CDS |
| AGTTGAGAGGAAAGGAGGGA+AGG | 0.527409 | 8_3:+21354617 | Msa1281650:CDS |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.527688 | 8_3:+21353534 | Msa1281650:CDS |
| ACAACCGCGTCGGAGGAACC+TGG | 0.530565 | 8_3:+21354337 | Msa1281650:CDS |
| CATTGGCTAGTGGAACAGAT+TGG | 0.533885 | 8_3:+21357762 | Msa1281650:CDS |
| CCCAATTTAACAATCAACAT+TGG | 0.536888 | 8_3:-21357944 | None:intergenic |
| TGGGTGGTTGAGTCAAGGGG+TGG | 0.539244 | 8_3:+21354642 | Msa1281650:CDS |
| ACCATTGAAGATAATCGTGT+TGG | 0.540422 | 8_3:+21357055 | Msa1281650:CDS |
| CGGAAACGTTCTTGGATCAC+CGG | 0.540881 | 8_3:-21354505 | None:intergenic |
| CCATTGAAGATAATCGTGTT+GGG | 0.541675 | 8_3:+21357056 | Msa1281650:CDS |
| TAAAGATTTCTATCAATCCA+TGG | 0.542834 | 8_3:+21357357 | Msa1281650:CDS |
| TGCCTCCATTGGAAGATTGG+AGG | 0.543061 | 8_3:+21357787 | Msa1281650:CDS |
| GAGAGCCATGGTGCTAGTGA+AGG | 0.545801 | 8_3:-21357103 | None:intergenic |
| GGCAACCATACCGGAGACTC+CGG | 0.546270 | 8_3:-21353559 | None:intergenic |
| TGGGTCTATGCTTAGAGGAT+CGG | 0.558879 | 8_3:-21354382 | None:intergenic |
| CGAAGCACTTCTTCATGACC+CGG | 0.562385 | 8_3:-21354525 | None:intergenic |
| CGGCGCCGGAGTCTCCGGTA+TGG | 0.563529 | 8_3:+21353554 | Msa1281650:CDS |
| ACAAGCCAAGTGGATTGCTA+GGG | 0.564142 | 8_3:+21357282 | Msa1281650:CDS |
| AGATATTGCAAGACTAGCAA+AGG | 0.564596 | 8_3:+21356604 | Msa1281650:CDS |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8_3:+21353540 | Msa1281650:CDS |
| GCCTCCATTGGAAGATTGGA+GGG | 0.569729 | 8_3:+21357788 | Msa1281650:CDS |
| GACCCGATTTGAAACGGAGG+TGG | 0.573131 | 8_3:+21354590 | Msa1281650:CDS |
| TTCCTCCTTCACTAGCACCA+TGG | 0.574851 | 8_3:+21357098 | Msa1281650:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.575571 | 8_3:-21356837 | None:intergenic |
| TAACCATGAGTATGACAAGC+TGG | 0.576655 | 8_3:+21353414 | Msa1281650:five_prime_UTR |
| GCCAAGGAGCTACAGCAAGA+AGG | 0.578883 | 8_3:+21353582 | Msa1281650:CDS |
| AGCCATGGTGCTAGTGAAGG+AGG | 0.579202 | 8_3:-21357100 | None:intergenic |
| ATAAGCATACACACTTGCAA+TGG | 0.579533 | 8_3:-21357421 | None:intergenic |
| AAGCGAATGAGTTTGACGCT+TGG | 0.580224 | 8_3:-21357395 | None:intergenic |
| GAGAAGAACAACCGCGTCGG+AGG | 0.581664 | 8_3:+21354330 | Msa1281650:intron |
| GATGCCATAATTCACTGTAC+AGG | 0.584145 | 8_3:+21356866 | Msa1281650:CDS |
| TCTCGGTTCCACAAAATGAC+CGG | 0.587827 | 8_3:-21354709 | None:intergenic |
| GTGGTGAAAGTTGAGAGGAA+AGG | 0.596110 | 8_3:+21354609 | Msa1281650:CDS |
| CGGAGGTGGTGAAAGTTGAG+AGG | 0.596521 | 8_3:+21354604 | Msa1281650:CDS |
| AATCTTCCAAGACATATCAT+GGG | 0.597490 | 8_3:+21354450 | Msa1281650:CDS |
| GAGTGGGTGGTTGAGTCAAG+GGG | 0.599919 | 8_3:+21354639 | Msa1281650:CDS |
| GATCCAGCTTGTCATACTCA+TGG | 0.602437 | 8_3:-21353417 | None:intergenic |
| CAATGTTGATTGTTAAATTG+GGG | 0.605226 | 8_3:+21357945 | Msa1281650:three_prime_UTR |
| CCAGGAACCACAGCAAGTCT+CGG | 0.606257 | 8_3:-21354726 | None:intergenic |
| ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8_3:+21356811 | Msa1281650:CDS |
| ATGCCATAATTCACTGTACA+GGG | 0.609312 | 8_3:+21356867 | Msa1281650:CDS |
| CGAAACCAGATTTGAAGGGT+AGG | 0.609593 | 8_3:+21356648 | Msa1281650:CDS |
| TTGTCCCTCCAATCTTCCAA+TGG | 0.611794 | 8_3:-21357792 | None:intergenic |
| CTGGTGAGTTTGGGATACAC+GGG | 0.612264 | 8_3:+21354565 | Msa1281650:CDS |
| GTCAGGGTGACTACAAACAT+TGG | 0.621125 | 8_3:+21357745 | Msa1281650:intron |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.623772 | 8_3:+21354674 | Msa1281650:CDS |
| TGACTACAAACATTGGCTAG+TGG | 0.629841 | 8_3:+21357752 | Msa1281650:CDS |
| TCCCTCCAATCTTCCAATGG+AGG | 0.630473 | 8_3:-21357789 | None:intergenic |
| AGACCGAAACCAGATTTGAA+GGG | 0.637200 | 8_3:+21356644 | Msa1281650:CDS |
| TGATTGAGTTACAAGCCAAG+TGG | 0.640201 | 8_3:+21357272 | Msa1281650:CDS |
| TTGTTTCTAGGAAAGGAATG+TGG | 0.641337 | 8_3:-21357021 | None:intergenic |
| TGTGGAACCGAGACTTGCTG+TGG | 0.641366 | 8_3:+21354719 | Msa1281650:CDS |
| TAAAACCCTAGCAATCCACT+TGG | 0.647424 | 8_3:-21357287 | None:intergenic |
| TTGTCATACTCATGGTTAGG+TGG | 0.651534 | 8_3:-21353409 | None:intergenic |
| ATATCCAGGTTCCTCCGACG+CGG | 0.654542 | 8_3:-21354341 | None:intergenic |
| AAACCAATGAAAGAGAGCCA+TGG | 0.673851 | 8_3:-21357115 | None:intergenic |
| AGATGGATTCTCTACTCATG+CGG | 0.676981 | 8_3:+21356844 | Msa1281650:CDS |
| ATCTTCCAAGACATATCATG+GGG | 0.677371 | 8_3:+21354451 | Msa1281650:CDS |
| TGGGATGCTATCATACAGAG+TGG | 0.690605 | 8_3:+21357888 | Msa1281650:CDS |
| TATGAGAAGAACAACCGCGT+CGG | 0.700640 | 8_3:+21354327 | Msa1281650:intron |
| GTTGACCCGATTTGAAACGG+AGG | 0.721505 | 8_3:+21354587 | Msa1281650:CDS |
| AGATTTCTATCAATCCATGG+AGG | 0.738259 | 8_3:+21357360 | Msa1281650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATAATCTTTTTTTTTTTTT+TGG | - | chr8_3:21355023-21355042 | None:intergenic | 10.0% |
| !! | AAATAATTCAAATATTACTT+TGG | + | chr8_3:21355763-21355782 | Msa1281650:intron | 10.0% |
| !! | AATAATTCAAATATTACTTT+GGG | + | chr8_3:21355764-21355783 | Msa1281650:intron | 10.0% |
| !! | ATTAATAGTGTTTATATAAT+GGG | - | chr8_3:21356074-21356093 | None:intergenic | 10.0% |
| !! | ATATATATAATTAATGATTG+AGG | + | chr8_3:21356967-21356986 | Msa1281650:intron | 10.0% |
| !! | AAATTAATAATAAATTATCG+TGG | + | chr8_3:21357229-21357248 | Msa1281650:intron | 10.0% |
| !! | TTGAAGGATTATTTATATAT+TGG | - | chr8_3:21355099-21355118 | None:intergenic | 15.0% |
| !!! | AAAAATATTTTTTACTCTGA+AGG | + | chr8_3:21355465-21355484 | Msa1281650:intron | 15.0% |
| !!! | AAAATATTTTTTACTCTGAA+GGG | + | chr8_3:21355466-21355485 | Msa1281650:intron | 15.0% |
| !! | AATTAATATATGAGAAACTT+TGG | + | chr8_3:21355736-21355755 | Msa1281650:intron | 15.0% |
| !! | ATTAATATATGAGAAACTTT+GGG | + | chr8_3:21355737-21355756 | Msa1281650:intron | 15.0% |
| !!! | AAAATATTTTAGGAAACTTA+GGG | + | chr8_3:21355901-21355920 | Msa1281650:intron | 15.0% |
| !! | CATTAATAGTGTTTATATAA+TGG | - | chr8_3:21356075-21356094 | None:intergenic | 15.0% |
| !! | AGTAGATTGAAAAAAAATAA+TGG | - | chr8_3:21356124-21356143 | None:intergenic | 15.0% |
| !! | AAAAATAAATTACTTTGTGT+TGG | - | chr8_3:21356216-21356235 | None:intergenic | 15.0% |
| !!! | TACATTTTTTACATTTTCTT+TGG | + | chr8_3:21356263-21356282 | Msa1281650:intron | 15.0% |
| !!! | ACATTTTTTACATTTTCTTT+GGG | + | chr8_3:21356264-21356283 | Msa1281650:intron | 15.0% |
| !! | TTAAGTAGAAATTATCAATT+AGG | - | chr8_3:21356534-21356553 | None:intergenic | 15.0% |
| !! | AGAAAAATATGTGAAAATTA+AGG | - | chr8_3:21356919-21356938 | None:intergenic | 15.0% |
| !!! | AATTTTTTCCCTTCTTTAAT+GGG | - | chr8_3:21353857-21353876 | None:intergenic | 20.0% |
| !! | TGTAAAATAATTTATCAGTG+AGG | + | chr8_3:21354099-21354118 | Msa1281650:intron | 20.0% |
| !! | ATATAATAATCGGTATACTA+TGG | - | chr8_3:21354185-21354204 | None:intergenic | 20.0% |
| !! | TTCAGATTACTTGATTAAAT+AGG | + | chr8_3:21354851-21354870 | Msa1281650:intron | 20.0% |
| !!! | AACATTCATGACTAATTTTA+AGG | - | chr8_3:21354967-21354986 | None:intergenic | 20.0% |
| !! | AACGTAATGAATAAAAAAGT+TGG | - | chr8_3:21355064-21355083 | None:intergenic | 20.0% |
| !!! | AAATTGCACATTTGAAATTA+AGG | + | chr8_3:21355156-21355175 | Msa1281650:intron | 20.0% |
| !!! | AATTGCACATTTGAAATTAA+GGG | + | chr8_3:21355157-21355176 | Msa1281650:intron | 20.0% |
| !! | TATTATTCTTGTATGTGTTA+CGG | - | chr8_3:21355295-21355314 | None:intergenic | 20.0% |
| !!! | AGATTTTTAGAAGTCTTTTT+CGG | + | chr8_3:21355666-21355685 | Msa1281650:intron | 20.0% |
| !!! | CTAAGTTTCCTAAAATATTT+TGG | - | chr8_3:21355902-21355921 | None:intergenic | 20.0% |
| !!! | CAAAATATTTTAGGAAACTT+AGG | + | chr8_3:21355900-21355919 | Msa1281650:intron | 20.0% |
| !!! | CATTTTTTACATTTTCTTTG+GGG | + | chr8_3:21356265-21356284 | Msa1281650:intron | 20.0% |
| !!! | ATTTTTTACATTTTCTTTGG+GGG | + | chr8_3:21356266-21356285 | Msa1281650:intron | 20.0% |
| !!! | ATTGATAATTTCTACTTAAC+AGG | + | chr8_3:21356535-21356554 | Msa1281650:intron | 20.0% |
| !!! | AAATTTTACATACCAAAGTA+TGG | - | chr8_3:21356703-21356722 | None:intergenic | 20.0% |
| !!! | TTGGTATGTAAAATTTGTTA+TGG | + | chr8_3:21356707-21356726 | Msa1281650:intron | 20.0% |
| !! | ATTAAATGTGTATATGAAGA+TGG | + | chr8_3:21356806-21356825 | Msa1281650:CDS | 20.0% |
| !! | CATATAAATCATAATATGAC+AGG | + | chr8_3:21356990-21357009 | Msa1281650:intron | 20.0% |
| !!! | TTATTTTTCTTGTTACTTCA+TGG | + | chr8_3:21357440-21357459 | Msa1281650:intron | 20.0% |
| !! | ACAATTGTCAAATTTGTAAT+TGG | - | chr8_3:21357667-21357686 | None:intergenic | 20.0% |
| !! | TACAAATTTGACAATTGTAA+AGG | + | chr8_3:21357669-21357688 | Msa1281650:intron | 20.0% |
| !! | ACAAATTTGACAATTGTAAA+GGG | + | chr8_3:21357670-21357689 | Msa1281650:intron | 20.0% |
| !! | ATTTACAAAATTACTTTGTC+AGG | + | chr8_3:21357728-21357747 | Msa1281650:intron | 20.0% |
| !! | TTTACAAAATTACTTTGTCA+GGG | + | chr8_3:21357729-21357748 | Msa1281650:intron | 20.0% |
| !!! | GAATTTTTTCCCTTCTTTAA+TGG | - | chr8_3:21353858-21353877 | None:intergenic | 25.0% |
| ! | CGTGGTTCAAATATAATAAT+CGG | - | chr8_3:21354195-21354214 | None:intergenic | 25.0% |
| !! | TTCGCAACTTTAAAAGAATT+CGG | - | chr8_3:21354255-21354274 | None:intergenic | 25.0% |
| ! | CAAAATGAATATGATTTACC+TGG | - | chr8_3:21354818-21354837 | None:intergenic | 25.0% |
| ! | CTTGATTAAATAGGCTAAAA+CGG | + | chr8_3:21354860-21354879 | Msa1281650:intron | 25.0% |
| !! | CATACTTTTGTATATGTGAA+AGG | - | chr8_3:21354944-21354963 | None:intergenic | 25.0% |
| ! | AAATTAGTCATGAATGTTCA+AGG | + | chr8_3:21354969-21354988 | Msa1281650:intron | 25.0% |
| ! | AATAATCCTTCAAACCAATT+TGG | + | chr8_3:21355106-21355125 | Msa1281650:intron | 25.0% |
| ! | GTAACACATACAAGAATAAT+AGG | + | chr8_3:21355294-21355313 | Msa1281650:intron | 25.0% |
| ! | ACAAAACATCTTAAAAAGAG+CGG | - | chr8_3:21355424-21355443 | None:intergenic | 25.0% |
| ! | AGAGACATTATATCTAGAAA+TGG | + | chr8_3:21355536-21355555 | Msa1281650:intron | 25.0% |
| !! | TTTCTTCTTTTCTTCCTTTT+TGG | - | chr8_3:21355645-21355664 | None:intergenic | 25.0% |
| !! | AATAGTGTTTATATAATGGG+AGG | - | chr8_3:21356071-21356090 | None:intergenic | 25.0% |
| !!! | ACTAGTTCTATACACAATAT+AGG | + | chr8_3:21356148-21356167 | Msa1281650:intron | 25.0% |
| ! | GAAAGTTAAAAGACTAAACA+CGG | - | chr8_3:21356177-21356196 | None:intergenic | 25.0% |
| !!! | TTTTTTACATTTTCTTTGGG+GGG | + | chr8_3:21356267-21356286 | Msa1281650:intron | 25.0% |
| !!! | ACAAAAATCAAGGTCTTATT+TGG | - | chr8_3:21356406-21356425 | None:intergenic | 25.0% |
| ! | TTACTGCTAAACAAAAATCA+AGG | - | chr8_3:21356416-21356435 | None:intergenic | 25.0% |
| ! | TAAACCACTTTAGTAAATCA+AGG | - | chr8_3:21356489-21356508 | None:intergenic | 25.0% |
| ! | TGATTTACTAAAGTGGTTTA+TGG | + | chr8_3:21356489-21356508 | Msa1281650:intron | 25.0% |
| ! | GATTTACTAAAGTGGTTTAT+GGG | + | chr8_3:21356490-21356509 | Msa1281650:intron | 25.0% |
| !!! | TAACAGGTTGTGATTTTAAT+TGG | + | chr8_3:21356551-21356570 | Msa1281650:intron | 25.0% |
| !!! | AACAGGTTGTGATTTTAATT+GGG | + | chr8_3:21356552-21356571 | Msa1281650:intron | 25.0% |
| ! | CAATATATGTTTCCATACTT+TGG | + | chr8_3:21356688-21356707 | Msa1281650:CDS | 25.0% |
| ! | ATCAATTAGGAATTTAGAAG+AGG | - | chr8_3:21356944-21356963 | None:intergenic | 25.0% |
| !!! | TTTCATTGGTTTAACCTATA+AGG | + | chr8_3:21357126-21357145 | Msa1281650:CDS | 25.0% |
| ! | GAAGTTTGTATTAACCTTAT+AGG | - | chr8_3:21357143-21357162 | None:intergenic | 25.0% |
| ! | TAAAGATTTCTATCAATCCA+TGG | + | chr8_3:21357357-21357376 | Msa1281650:CDS | 25.0% |
| !! | ATAGGCCTTCTTAATTTTAA+TGG | + | chr8_3:21357610-21357629 | Msa1281650:intron | 25.0% |
| ! | TTGCTCCATTAAAATTAAGA+AGG | - | chr8_3:21357618-21357637 | None:intergenic | 25.0% |
| !!! | TCTTAATTTTAATGGAGCAA+TGG | + | chr8_3:21357618-21357637 | Msa1281650:intron | 25.0% |
| ! | ATGAATGGGATGATAATTAT+TGG | + | chr8_3:21357868-21357887 | Msa1281650:CDS | 25.0% |
| ! | TGAATGGGATGATAATTATT+GGG | + | chr8_3:21357869-21357888 | Msa1281650:CDS | 25.0% |
| !! | TCCAATGTTGATTGTTAAAT+TGG | + | chr8_3:21357943-21357962 | Msa1281650:three_prime_UTR | 25.0% |
| !! | CCAATGTTGATTGTTAAATT+GGG | + | chr8_3:21357944-21357963 | Msa1281650:three_prime_UTR | 25.0% |
| !! | CAATGTTGATTGTTAAATTG+GGG | + | chr8_3:21357945-21357964 | Msa1281650:three_prime_UTR | 25.0% |
| CTAAAACAATCTTGTCTTGA+TGG | + | chr8_3:21353515-21353534 | Msa1281650:exon | 30.0% | |
| TCAGATGAATTATGTGACTA+TGG | - | chr8_3:21353635-21353654 | None:intergenic | 30.0% | |
| AATTCTCTCCCTTCTTTAAT+AGG | - | chr8_3:21353891-21353910 | None:intergenic | 30.0% | |
| AACTCAATGAAAAATATGCG+AGG | + | chr8_3:21353949-21353968 | Msa1281650:intron | 30.0% | |
| AATCTTCCAAGACATATCAT+GGG | + | chr8_3:21354450-21354469 | Msa1281650:CDS | 30.0% | |
| !! | TATTAGCCAAATTGGTTTGA+AGG | - | chr8_3:21355115-21355134 | None:intergenic | 30.0% |
| CTTGTCTTTATTAGCCAAAT+TGG | - | chr8_3:21355123-21355142 | None:intergenic | 30.0% | |
| !! | TACGTTGTTTTCAAAACCAA+TGG | - | chr8_3:21355219-21355238 | None:intergenic | 30.0% |
| TGTCTCTTCGAAATTAAGAA+TGG | - | chr8_3:21355523-21355542 | None:intergenic | 30.0% | |
| CGTAAGAACACTCTTAATTA+AGG | + | chr8_3:21355587-21355606 | Msa1281650:intron | 30.0% | |
| ! | GCTGTGTTCCAAAATATTTT+AGG | + | chr8_3:21355891-21355910 | Msa1281650:intron | 30.0% |
| AGTACATAATTATGTGAACG+AGG | - | chr8_3:21356033-21356052 | None:intergenic | 30.0% | |
| TAATTATGTACTCCCTTTAG+AGG | + | chr8_3:21356041-21356060 | Msa1281650:intron | 30.0% | |
| TGTTTGTGATCTATCTAATG+TGG | + | chr8_3:21356093-21356112 | Msa1281650:intron | 30.0% | |
| TATTGTGTATAGAACTAGTG+TGG | - | chr8_3:21356147-21356166 | None:intergenic | 30.0% | |
| AAGACCTTGATTTACTAAAG+TGG | + | chr8_3:21356482-21356501 | Msa1281650:intron | 30.0% | |
| TTTATGGGATGTTCAATCTT+TGG | + | chr8_3:21356505-21356524 | Msa1281650:intron | 30.0% | |
| ATTCCTTTCCTAGAAACAAA+TGG | + | chr8_3:21357025-21357044 | Msa1281650:CDS | 30.0% | |
| ! | TTACTGTTCCATTTGTTTCT+AGG | - | chr8_3:21357036-21357055 | None:intergenic | 30.0% |
| AATAATAAATTATCGTGGCC+AGG | + | chr8_3:21357234-21357253 | Msa1281650:intron | 30.0% | |
| TTTGACAATTGTAAAGGGTA+AGG | + | chr8_3:21357675-21357694 | Msa1281650:intron | 30.0% | |
| ACGAAATGTTTAGAGATGAA+TGG | + | chr8_3:21357853-21357872 | Msa1281650:CDS | 30.0% | |
| CGAAATGTTTAGAGATGAAT+GGG | + | chr8_3:21357854-21357873 | Msa1281650:CDS | 30.0% | |
| CCCAATTTAACAATCAACAT+TGG | - | chr8_3:21357947-21357966 | None:intergenic | 30.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr8_3:21353534-21353553 | Msa1281650:CDS | 35.0% | |
| !! | CTTTCTTTAGTCTTTTGAGC+TGG | - | chr8_3:21353766-21353785 | None:intergenic | 35.0% |
| CAGCTCAAAAGACTAAAGAA+AGG | + | chr8_3:21353764-21353783 | Msa1281650:intron | 35.0% | |
| !! | TTTTCCCTTCTTTAATGGGT+GGG | - | chr8_3:21353853-21353872 | None:intergenic | 35.0% |
| ! | TTTTTCCCTTCTTTAATGGG+TGG | - | chr8_3:21353854-21353873 | None:intergenic | 35.0% |
| AAAGAAGGGAAAAAATTCCC+TGG | + | chr8_3:21353860-21353879 | Msa1281650:intron | 35.0% | |
| TCAATGAAAAATATGCGAGG+AGG | + | chr8_3:21353952-21353971 | Msa1281650:intron | 35.0% | |
| CAATGAAAAATATGCGAGGA+GGG | + | chr8_3:21353953-21353972 | Msa1281650:intron | 35.0% | |
| TAAAAGAATTCGGTACGTGA+GGG | - | chr8_3:21354245-21354264 | None:intergenic | 35.0% | |
| TTAAAAGAATTCGGTACGTG+AGG | - | chr8_3:21354246-21354265 | None:intergenic | 35.0% | |
| TTGTTCTTCTCATAGTCACA+CGG | - | chr8_3:21354321-21354340 | None:intergenic | 35.0% | |
| TGATTTATGGGTGTATATCC+AGG | - | chr8_3:21354358-21354377 | None:intergenic | 35.0% | |
| CATGATATGTCTTGGAAGAT+TGG | - | chr8_3:21354451-21354470 | None:intergenic | 35.0% | |
| CAATCTTCCAAGACATATCA+TGG | + | chr8_3:21354449-21354468 | Msa1281650:CDS | 35.0% | |
| ATCTTCCAAGACATATCATG+GGG | + | chr8_3:21354451-21354470 | Msa1281650:CDS | 35.0% | |
| !!! | TGAAGAAGTGCTTCGTTTTT+TGG | + | chr8_3:21354533-21354552 | Msa1281650:CDS | 35.0% |
| ! | CCACTAAAGTTTTCAATACC+AGG | - | chr8_3:21354747-21354766 | None:intergenic | 35.0% |
| ! | CCTGGTATTGAAAACTTTAG+TGG | + | chr8_3:21354744-21354763 | Msa1281650:CDS | 35.0% |
| CGGAAAACATGTATGCAAAT+AGG | + | chr8_3:21354880-21354899 | Msa1281650:intron | 35.0% | |
| ATGGTAGAGGCGATAAAAAT+AGG | - | chr8_3:21355200-21355219 | None:intergenic | 35.0% | |
| ! | ATTTTTATCGCCTCTACCAT+TGG | + | chr8_3:21355200-21355219 | Msa1281650:intron | 35.0% |
| ! | GTTTTCAAAACCAATGGTAG+AGG | - | chr8_3:21355213-21355232 | None:intergenic | 35.0% |
| !!! | TCTTCCTTTTTGGTTTGTGT+TGG | - | chr8_3:21355635-21355654 | None:intergenic | 35.0% |
| !!! | CTTTTTTGTCTCGTAAGTGT+AGG | - | chr8_3:21356465-21356484 | None:intergenic | 35.0% |
| !!! | GTTGTGATTTTAATTGGGCT+AGG | + | chr8_3:21356557-21356576 | Msa1281650:CDS | 35.0% |
| AGATATTGCAAGACTAGCAA+AGG | + | chr8_3:21356604-21356623 | Msa1281650:CDS | 35.0% | |
| ATGTGTATATGAAGATGGCT+TGG | + | chr8_3:21356811-21356830 | Msa1281650:CDS | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | - | chr8_3:21356840-21356859 | None:intergenic | 35.0% | |
| ATGCCATAATTCACTGTACA+GGG | + | chr8_3:21356867-21356886 | Msa1281650:CDS | 35.0% | |
| TTACCCTGTACAGTGAATTA+TGG | - | chr8_3:21356873-21356892 | None:intergenic | 35.0% | |
| !! | TTGTTTCTAGGAAAGGAATG+TGG | - | chr8_3:21357024-21357043 | None:intergenic | 35.0% |
| !! | GTTCCATTTGTTTCTAGGAA+AGG | - | chr8_3:21357031-21357050 | None:intergenic | 35.0% |
| ACCATTGAAGATAATCGTGT+TGG | + | chr8_3:21357055-21357074 | Msa1281650:CDS | 35.0% | |
| CCATTGAAGATAATCGTGTT+GGG | + | chr8_3:21357056-21357075 | Msa1281650:CDS | 35.0% | |
| GGAAAAACGTGTTTGTATAG+TGG | - | chr8_3:21357082-21357101 | None:intergenic | 35.0% | |
| TTCATCATCTCTTCTTCATC+AGG | - | chr8_3:21357331-21357350 | None:intergenic | 35.0% | |
| AGATTTCTATCAATCCATGG+AGG | + | chr8_3:21357360-21357379 | Msa1281650:CDS | 35.0% | |
| TATCAATCCATGGAGGAAAA+TGG | + | chr8_3:21357367-21357386 | Msa1281650:CDS | 35.0% | |
| ATCAATCCATGGAGGAAAAT+GGG | + | chr8_3:21357368-21357387 | Msa1281650:CDS | 35.0% | |
| ATAAGCATACACACTTGCAA+TGG | - | chr8_3:21357424-21357443 | None:intergenic | 35.0% | |
| ACAATTGTAAAGGGTAAGGT+AGG | + | chr8_3:21357679-21357698 | Msa1281650:intron | 35.0% | |
| TTGTCATACTCATGGTTAGG+TGG | - | chr8_3:21353412-21353431 | None:intergenic | 40.0% | |
| AGCTTGTCATACTCATGGTT+AGG | - | chr8_3:21353415-21353434 | None:intergenic | 40.0% | |
| TAACCATGAGTATGACAAGC+TGG | + | chr8_3:21353414-21353433 | Msa1281650:five_prime_UTR | 40.0% | |
| !! | CCTTGCGAATTTTAACGAAC+CGG | - | chr8_3:21353713-21353732 | None:intergenic | 40.0% |
| CCAGTGAATTATTTACTGGC+GGG | - | chr8_3:21353829-21353848 | None:intergenic | 40.0% | |
| GCCAGTGAATTATTTACTGG+CGG | - | chr8_3:21353830-21353849 | None:intergenic | 40.0% | |
| ! | TTTCCCTTCTTTAATGGGTG+GGG | - | chr8_3:21353852-21353871 | None:intergenic | 40.0% |
| TCTCCCTTCTTTAATAGGTG+GGG | - | chr8_3:21353886-21353905 | None:intergenic | 40.0% | |
| CTCTCCCTTCTTTAATAGGT+GGG | - | chr8_3:21353887-21353906 | None:intergenic | 40.0% | |
| TCTCTCCCTTCTTTAATAGG+TGG | - | chr8_3:21353888-21353907 | None:intergenic | 40.0% | |
| AAAGAAGGGAGAGAATTCAC+TGG | + | chr8_3:21353894-21353913 | Msa1281650:intron | 40.0% | |
| TTCCCATTCCTTTAGTAGGT+GGG | - | chr8_3:21353921-21353940 | None:intergenic | 40.0% | |
| ! | ACATCGACTACTTAGCAACA+TGG | - | chr8_3:21354008-21354027 | None:intergenic | 40.0% |
| ATGTTGCTAAGTAGTCGATG+TGG | + | chr8_3:21354007-21354026 | Msa1281650:intron | 40.0% | |
| TGTTGCTAAGTAGTCGATGT+GGG | + | chr8_3:21354008-21354027 | Msa1281650:intron | 40.0% | |
| TCAGTGCTTTCATATCAGTG+AGG | + | chr8_3:21354052-21354071 | Msa1281650:intron | 40.0% | |
| AAAAGAATTCGGTACGTGAG+GGG | - | chr8_3:21354244-21354263 | None:intergenic | 40.0% | |
| AGGATCGGAGTCTGATTTAT+GGG | - | chr8_3:21354370-21354389 | None:intergenic | 40.0% | |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | - | chr8_3:21354404-21354423 | None:intergenic | 40.0% |
| AAGAACCCCATGATATGTCT+TGG | - | chr8_3:21354459-21354478 | None:intergenic | 40.0% | |
| !!! | AGAAGTGCTTCGTTTTTTGG+AGG | + | chr8_3:21354536-21354555 | Msa1281650:CDS | 40.0% |
| !!! | CGTTTTTTGGAGGATTTTGC+TGG | + | chr8_3:21354546-21354565 | Msa1281650:CDS | 40.0% |
| ! | AGGATTTTGCTGGTGAGTTT+GGG | + | chr8_3:21354556-21354575 | Msa1281650:CDS | 40.0% |
| TGAAAGTTGAGAGGAAAGGA+GGG | + | chr8_3:21354613-21354632 | Msa1281650:CDS | 40.0% | |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr8_3:21354674-21354693 | Msa1281650:CDS | 40.0% |
| TCCTCATTCTTTCAAAGACC+AGG | + | chr8_3:21354797-21354816 | Msa1281650:CDS | 40.0% | |
| ! | ACCTGGTCTTTGAAAGAATG+AGG | - | chr8_3:21354801-21354820 | None:intergenic | 40.0% |
| ACATCTTAAAAAGAGCGGCT+TGG | - | chr8_3:21355419-21355438 | None:intergenic | 40.0% | |
| !!! | TAGAAGTCTTTTTCGGTGTG+TGG | + | chr8_3:21355673-21355692 | Msa1281650:intron | 40.0% |
| !! | TTTACATTTTCTTTGGGGGG+TGG | + | chr8_3:21356270-21356289 | Msa1281650:intron | 40.0% |
| CGCTTTCATACAACGTGTTA+GGG | - | chr8_3:21356312-21356331 | None:intergenic | 40.0% | |
| CCTAACACGTTGTATGAAAG+CGG | + | chr8_3:21356310-21356329 | Msa1281650:intron | 40.0% | |
| AAGACCGAAACCAGATTTGA+AGG | + | chr8_3:21356643-21356662 | Msa1281650:CDS | 40.0% | |
| AGACCGAAACCAGATTTGAA+GGG | + | chr8_3:21356644-21356663 | Msa1281650:CDS | 40.0% | |
| ! | CTACCCTTCAAATCTGGTTT+CGG | - | chr8_3:21356650-21356669 | None:intergenic | 40.0% |
| AACTTCCTACCCTTCAAATC+TGG | - | chr8_3:21356656-21356675 | None:intergenic | 40.0% | |
| ! | AGATGGATTCTCTACTCATG+CGG | + | chr8_3:21356844-21356863 | Msa1281650:CDS | 40.0% |
| GATGCCATAATTCACTGTAC+AGG | + | chr8_3:21356866-21356885 | Msa1281650:CDS | 40.0% | |
| CCCAACACGATTATCTTCAA+TGG | - | chr8_3:21357059-21357078 | None:intergenic | 40.0% | |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr8_3:21357118-21357137 | None:intergenic | 40.0% | |
| TCACACTGAAAGCAATTTCC+TGG | - | chr8_3:21357255-21357274 | None:intergenic | 40.0% | |
| TGATTGAGTTACAAGCCAAG+TGG | + | chr8_3:21357272-21357291 | Msa1281650:CDS | 40.0% | |
| TAAAACCCTAGCAATCCACT+TGG | - | chr8_3:21357290-21357309 | None:intergenic | 40.0% | |
| !! | TGGATTGCTAGGGTTTTATC+TGG | + | chr8_3:21357292-21357311 | Msa1281650:CDS | 40.0% |
| !! | TGCTAGGGTTTTATCTGGTA+AGG | + | chr8_3:21357297-21357316 | Msa1281650:CDS | 40.0% |
| ! | TGACTACAAACATTGGCTAG+TGG | + | chr8_3:21357752-21357771 | Msa1281650:CDS | 40.0% |
| TTGGAGGGACAATATGTTGA+TGG | + | chr8_3:21357803-21357822 | Msa1281650:CDS | 40.0% | |
| GATCCAGCTTGTCATACTCA+TGG | - | chr8_3:21353420-21353439 | None:intergenic | 45.0% | |
| TCTCAAAAACGACGACGTTG+TGG | - | chr8_3:21353608-21353627 | None:intergenic | 45.0% | |
| ! | CCGGTTCGTTAAAATTCGCA+AGG | + | chr8_3:21353710-21353729 | Msa1281650:intron | 45.0% |
| CCCGCCAGTAAATAATTCAC+TGG | + | chr8_3:21353826-21353845 | Msa1281650:intron | 45.0% | |
| GGGGCCAGTGAATTATTTAC+TGG | - | chr8_3:21353833-21353852 | None:intergenic | 45.0% | |
| TTCTTTAATAGGTGGGGCCA+GGG | - | chr8_3:21353880-21353899 | None:intergenic | 45.0% | |
| TGGCCCCACCTATTAAAGAA+GGG | + | chr8_3:21353880-21353899 | Msa1281650:intron | 45.0% | |
| TCCCATTCCTTTAGTAGGTG+GGG | - | chr8_3:21353920-21353939 | None:intergenic | 45.0% | |
| CTTCCCATTCCTTTAGTAGG+TGG | - | chr8_3:21353922-21353941 | None:intergenic | 45.0% | |
| TATACAGAGTCGGTACGCTT+AGG | - | chr8_3:21354220-21354239 | None:intergenic | 45.0% | |
| AAAGAATTCGGTACGTGAGG+GGG | - | chr8_3:21354243-21354262 | None:intergenic | 45.0% | |
| TATGAGAAGAACAACCGCGT+CGG | + | chr8_3:21354327-21354346 | Msa1281650:intron | 45.0% | |
| GAGGATCGGAGTCTGATTTA+TGG | - | chr8_3:21354371-21354390 | None:intergenic | 45.0% | |
| TGGGTCTATGCTTAGAGGAT+CGG | - | chr8_3:21354385-21354404 | None:intergenic | 45.0% | |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | - | chr8_3:21354405-21354424 | None:intergenic | 45.0% |
| ! | GAGGATTTTGCTGGTGAGTT+TGG | + | chr8_3:21354555-21354574 | Msa1281650:CDS | 45.0% |
| TCACCACCTCCGTTTCAAAT+CGG | - | chr8_3:21354596-21354615 | None:intergenic | 45.0% | |
| GTGGTGAAAGTTGAGAGGAA+AGG | + | chr8_3:21354609-21354628 | Msa1281650:CDS | 45.0% | |
| GTGAAAGTTGAGAGGAAAGG+AGG | + | chr8_3:21354612-21354631 | Msa1281650:CDS | 45.0% | |
| !! | TGTGTGTTCCGGTCATTTTG+TGG | + | chr8_3:21354701-21354720 | Msa1281650:CDS | 45.0% |
| TCTCGGTTCCACAAAATGAC+CGG | - | chr8_3:21354712-21354731 | None:intergenic | 45.0% | |
| CTCGCCAACACAAACCAAAA+AGG | + | chr8_3:21355628-21355647 | Msa1281650:intron | 45.0% | |
| ! | ATGGGAGGTGTACCTCTAAA+GGG | - | chr8_3:21356056-21356075 | None:intergenic | 45.0% |
| ! | AATGGGAGGTGTACCTCTAA+AGG | - | chr8_3:21356057-21356076 | None:intergenic | 45.0% |
| TCATACAACGTGTTAGGGCT+CGG | - | chr8_3:21356307-21356326 | None:intergenic | 45.0% | |
| CCGCTTTCATACAACGTGTT+AGG | - | chr8_3:21356313-21356332 | None:intergenic | 45.0% | |
| CGAAACCAGATTTGAAGGGT+AGG | + | chr8_3:21356648-21356667 | Msa1281650:CDS | 45.0% | |
| !! | TACAAGCCAAGTGGATTGCT+AGG | + | chr8_3:21357281-21357300 | Msa1281650:CDS | 45.0% |
| !! | ACAAGCCAAGTGGATTGCTA+GGG | + | chr8_3:21357282-21357301 | Msa1281650:CDS | 45.0% |
| AGCGAATGAGTTTGACGCTT+GGG | - | chr8_3:21357397-21357416 | None:intergenic | 45.0% | |
| AAGCGAATGAGTTTGACGCT+TGG | - | chr8_3:21357398-21357417 | None:intergenic | 45.0% | |
| GTCAGGGTGACTACAAACAT+TGG | + | chr8_3:21357745-21357764 | Msa1281650:intron | 45.0% | |
| ! | CATTGGCTAGTGGAACAGAT+TGG | + | chr8_3:21357762-21357781 | Msa1281650:CDS | 45.0% |
| TTGTCCCTCCAATCTTCCAA+TGG | - | chr8_3:21357795-21357814 | None:intergenic | 45.0% | |
| TGGGATGCTATCATACAGAG+TGG | + | chr8_3:21357888-21357907 | Msa1281650:CDS | 45.0% | |
| !!! | TAAAAAAGAATTTTTATTTA+CGG | + | chr8_3:21355375-21355394 | Msa1281650:intron | 5.0% |
| !! | TTATATATATAATATCAATT+AGG | - | chr8_3:21356957-21356976 | None:intergenic | 5.0% |
| !! | TTTAAATTAAAAAAATCAAT+AGG | + | chr8_3:21357592-21357611 | Msa1281650:intron | 5.0% |
| ! | TTCTTGCTGTAGCTCCTTGG+CGG | - | chr8_3:21353583-21353602 | None:intergenic | 50.0% |
| !! | TTCGTGAAAGTACCGCGAAC+CGG | - | chr8_3:21353690-21353709 | None:intergenic | 50.0% |
| TTCGCGGTACTTTCACGAAC+CGG | + | chr8_3:21353691-21353710 | Msa1281650:intron | 50.0% | |
| TGGCCCCACCCATTAAAGAA+GGG | + | chr8_3:21353846-21353865 | Msa1281650:intron | 50.0% | |
| CTTCTTTAATAGGTGGGGCC+AGG | - | chr8_3:21353881-21353900 | None:intergenic | 50.0% | |
| CTGGCCCCACCTATTAAAGA+AGG | + | chr8_3:21353879-21353898 | Msa1281650:intron | 50.0% | |
| GCCCCACCTACTAAAGGAAT+GGG | + | chr8_3:21353916-21353935 | Msa1281650:intron | 50.0% | |
| GCGCTTCCCATTCCTTTAGT+AGG | - | chr8_3:21353925-21353944 | None:intergenic | 50.0% | |
| ATTCGCTTCGGTACGTGGTA+CGG | - | chr8_3:21354292-21354311 | None:intergenic | 50.0% | |
| ACACGGTTCGCAATTCGCTT+CGG | - | chr8_3:21354304-21354323 | None:intergenic | 50.0% | |
| CTGGTTGGGTCTATGCTTAG+AGG | - | chr8_3:21354390-21354409 | None:intergenic | 50.0% | |
| ! | GCTGCTGTGAACTGTTTCTC+TGG | - | chr8_3:21354409-21354428 | None:intergenic | 50.0% |
| CGGATTCTCGCTTGGACAAA+GGG | - | chr8_3:21354488-21354507 | None:intergenic | 50.0% | |
| CCTTTGTCCAAGCGAGAATC+CGG | + | chr8_3:21354486-21354505 | Msa1281650:CDS | 50.0% | |
| CGGAAACGTTCTTGGATCAC+CGG | - | chr8_3:21354508-21354527 | None:intergenic | 50.0% | |
| CGGTGATCCAAGAACGTTTC+CGG | + | chr8_3:21354506-21354525 | Msa1281650:CDS | 50.0% | |
| GGTGATCCAAGAACGTTTCC+GGG | + | chr8_3:21354507-21354526 | Msa1281650:CDS | 50.0% | |
| TCATGACCCGGAAACGTTCT+TGG | - | chr8_3:21354516-21354535 | None:intergenic | 50.0% | |
| ! | CGAAGCACTTCTTCATGACC+CGG | - | chr8_3:21354528-21354547 | None:intergenic | 50.0% |
| ! | GCTGGTGAGTTTGGGATACA+CGG | + | chr8_3:21354564-21354583 | Msa1281650:CDS | 50.0% |
| ! | CTGGTGAGTTTGGGATACAC+GGG | + | chr8_3:21354565-21354584 | Msa1281650:CDS | 50.0% |
| ! | CGGGTTGACCCGATTTGAAA+CGG | + | chr8_3:21354584-21354603 | Msa1281650:CDS | 50.0% |
| ! | GTTGACCCGATTTGAAACGG+AGG | + | chr8_3:21354587-21354606 | Msa1281650:CDS | 50.0% |
| CACCACCTCCGTTTCAAATC+GGG | - | chr8_3:21354595-21354614 | None:intergenic | 50.0% | |
| AGTTGAGAGGAAAGGAGGGA+AGG | + | chr8_3:21354617-21354636 | Msa1281650:CDS | 50.0% | |
| GAAGCGGTTGTTGTGTGTTC+CGG | + | chr8_3:21354690-21354709 | Msa1281650:CDS | 50.0% | |
| CGGTAACACTTCATGTCGCT+CGG | - | chr8_3:21355275-21355294 | None:intergenic | 50.0% | |
| !! | TTTCTTTGGGGGGTGGATTG+TGG | + | chr8_3:21356277-21356296 | Msa1281650:intron | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | + | chr8_3:21356827-21356846 | Msa1281650:CDS | 50.0% |
| TTCCTCCTTCACTAGCACCA+TGG | + | chr8_3:21357098-21357117 | Msa1281650:CDS | 50.0% | |
| GCACCATGGCTCTCTTTCAT+TGG | + | chr8_3:21357112-21357131 | Msa1281650:CDS | 50.0% | |
| ! | GGGTAACCCATTTTCCTCCA+TGG | - | chr8_3:21357377-21357396 | None:intergenic | 50.0% |
| ACAGATTGGACTGCCTCCAT+TGG | + | chr8_3:21357776-21357795 | Msa1281650:CDS | 50.0% | |
| GACTGCCTCCATTGGAAGAT+TGG | + | chr8_3:21357784-21357803 | Msa1281650:CDS | 50.0% | |
| TGCCTCCATTGGAAGATTGG+AGG | + | chr8_3:21357787-21357806 | Msa1281650:CDS | 50.0% | |
| GCCTCCATTGGAAGATTGGA+GGG | + | chr8_3:21357788-21357807 | Msa1281650:CDS | 50.0% | |
| TCCCTCCAATCTTCCAATGG+AGG | - | chr8_3:21357792-21357811 | None:intergenic | 50.0% | |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr8_3:21353540-21353559 | Msa1281650:CDS | 55.0% | |
| GCCAAGGAGCTACAGCAAGA+AGG | + | chr8_3:21353582-21353601 | Msa1281650:CDS | 55.0% | |
| ! | GCCTTCTTGCTGTAGCTCCT+TGG | - | chr8_3:21353586-21353605 | None:intergenic | 55.0% |
| CTGGCCCCACCCATTAAAGA+AGG | + | chr8_3:21353845-21353864 | Msa1281650:intron | 55.0% | |
| TCACTGGCCCCACCTACTAA+AGG | + | chr8_3:21353910-21353929 | Msa1281650:intron | 55.0% | |
| GGCCCCACCTACTAAAGGAA+TGG | + | chr8_3:21353915-21353934 | Msa1281650:intron | 55.0% | |
| AGTCGGTACGCTTAGGTTCG+TGG | - | chr8_3:21354213-21354232 | None:intergenic | 55.0% | |
| ! | CGTGAGGGGGTATACAGAGT+CGG | - | chr8_3:21354230-21354249 | None:intergenic | 55.0% |
| TTCGGTACGTGGTACGGGTT+CGG | - | chr8_3:21354286-21354305 | None:intergenic | 55.0% | |
| TTCGCTTCGGTACGTGGTAC+GGG | - | chr8_3:21354291-21354310 | None:intergenic | 55.0% | |
| TCGCAATTCGCTTCGGTACG+TGG | - | chr8_3:21354297-21354316 | None:intergenic | 55.0% | |
| ATATCCAGGTTCCTCCGACG+CGG | - | chr8_3:21354344-21354363 | None:intergenic | 55.0% | |
| CCGGATTCTCGCTTGGACAA+AGG | - | chr8_3:21354489-21354508 | None:intergenic | 55.0% | |
| TGGATCACCGGATTCTCGCT+TGG | - | chr8_3:21354496-21354515 | None:intergenic | 55.0% | |
| ! | GACCCGATTTGAAACGGAGG+TGG | + | chr8_3:21354590-21354609 | Msa1281650:CDS | 55.0% |
| CGGAGGTGGTGAAAGTTGAG+AGG | + | chr8_3:21354604-21354623 | Msa1281650:CDS | 55.0% | |
| AGAGGAAAGGAGGGAAGGAG+TGG | + | chr8_3:21354622-21354641 | Msa1281650:CDS | 55.0% | |
| GAGGAAAGGAGGGAAGGAGT+GGG | + | chr8_3:21354623-21354642 | Msa1281650:CDS | 55.0% | |
| AGGAGTGGGTGGTTGAGTCA+AGG | + | chr8_3:21354637-21354656 | Msa1281650:CDS | 55.0% | |
| GGAGTGGGTGGTTGAGTCAA+GGG | + | chr8_3:21354638-21354657 | Msa1281650:CDS | 55.0% | |
| GAGTGGGTGGTTGAGTCAAG+GGG | + | chr8_3:21354639-21354658 | Msa1281650:CDS | 55.0% | |
| !! | TGTGGAACCGAGACTTGCTG+TGG | + | chr8_3:21354719-21354738 | Msa1281650:CDS | 55.0% |
| CCAGGAACCACAGCAAGTCT+CGG | - | chr8_3:21354729-21354748 | None:intergenic | 55.0% | |
| ! | AGCCATGGTGCTAGTGAAGG+AGG | - | chr8_3:21357103-21357122 | None:intergenic | 55.0% |
| ! | GAGAGCCATGGTGCTAGTGA+AGG | - | chr8_3:21357106-21357125 | None:intergenic | 55.0% |
| GGCAACCATACCGGAGACTC+CGG | - | chr8_3:21353562-21353581 | None:intergenic | 60.0% | |
| CTCCTTGGCGGCAACCATAC+CGG | - | chr8_3:21353571-21353590 | None:intergenic | 60.0% | |
| AGAGCCTGAGAACCGCGAAC+CGG | + | chr8_3:21353654-21353673 | Msa1281650:intron | 60.0% | |
| TCGGTACGTGGTACGGGTTC+GGG | - | chr8_3:21354285-21354304 | None:intergenic | 60.0% | |
| GAGAAGAACAACCGCGTCGG+AGG | + | chr8_3:21354330-21354349 | Msa1281650:intron | 60.0% | |
| GAAAGGAGGGAAGGAGTGGG+TGG | + | chr8_3:21354626-21354645 | Msa1281650:CDS | 60.0% | |
| TGGGTGGTTGAGTCAAGGGG+TGG | + | chr8_3:21354642-21354661 | Msa1281650:CDS | 60.0% | |
| !! | CCGAGACTTGCTGTGGTTCC+TGG | + | chr8_3:21354726-21354745 | Msa1281650:CDS | 60.0% |
| CTCCGGTATGGTTGCCGCCA+AGG | + | chr8_3:21353566-21353585 | Msa1281650:CDS | 65.0% | |
| !! | CGAACCGGTTCGCGGTTCTC+AGG | - | chr8_3:21353661-21353680 | None:intergenic | 65.0% |
| GTGGTACGGGTTCGGGTACG+CGG | - | chr8_3:21354278-21354297 | None:intergenic | 65.0% | |
| ACAACCGCGTCGGAGGAACC+TGG | + | chr8_3:21354337-21354356 | Msa1281650:CDS | 65.0% | |
| ! | GTGATCGGCGCCGGAGTCTC+CGG | + | chr8_3:21353549-21353568 | Msa1281650:CDS | 70.0% |
| !! | GGTTCGCGCGAACCGGTTCG+CGG | - | chr8_3:21353675-21353694 | None:intergenic | 70.0% |
| !! | GCGAACCGGTTCGCGCGAAC+CGG | + | chr8_3:21353668-21353687 | Msa1281650:intron | 70.0% |
| !! | GCGAACCGGTTCGCGCGAAC+CGG | - | chr8_3:21353668-21353687 | None:intergenic | 70.0% |
| !! | GGTTCGCGCGAACCGGTTCG+CGG | + | chr8_3:21353675-21353694 | Msa1281650:intron | 70.0% |
| ! | CGGCGCCGGAGTCTCCGGTA+TGG | + | chr8_3:21353554-21353573 | Msa1281650:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 21353405 | 21358076 | 21353405 | ID=Msa1281650;Name=Msa1281650 |
| chr8_3 | mRNA | 21353405 | 21358076 | 21353405 | ID=Msa1281650-mRNA-1;Parent=Msa1281650;Name=Msa1281650-mRNA-1;_AED=0.11;_eAED=0.11;_QI=129|1|1|1|0.83|0.71|7|153|432 |
| chr8_3 | exon | 21353405 | 21353626 | 21353405 | ID=Msa1281650-mRNA-1:exon:7767;Parent=Msa1281650-mRNA-1 |
| chr8_3 | exon | 21354333 | 21354818 | 21354333 | ID=Msa1281650-mRNA-1:exon:7768;Parent=Msa1281650-mRNA-1 |
| chr8_3 | exon | 21356557 | 21356709 | 21356557 | ID=Msa1281650-mRNA-1:exon:7769;Parent=Msa1281650-mRNA-1 |
| chr8_3 | exon | 21356806 | 21356888 | 21356806 | ID=Msa1281650-mRNA-1:exon:7770;Parent=Msa1281650-mRNA-1 |
| chr8_3 | exon | 21357012 | 21357147 | 21357012 | ID=Msa1281650-mRNA-1:exon:7771;Parent=Msa1281650-mRNA-1 |
| chr8_3 | exon | 21357256 | 21357429 | 21357256 | ID=Msa1281650-mRNA-1:exon:7772;Parent=Msa1281650-mRNA-1 |
| chr8_3 | exon | 21357750 | 21358076 | 21357750 | ID=Msa1281650-mRNA-1:exon:7773;Parent=Msa1281650-mRNA-1 |
| chr8_3 | five_prime_UTR | 21353405 | 21353533 | 21353405 | ID=Msa1281650-mRNA-1:five_prime_utr;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21353534 | 21353626 | 21353534 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21354333 | 21354818 | 21354333 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21356557 | 21356709 | 21356557 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21356806 | 21356888 | 21356806 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21357012 | 21357147 | 21357012 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21357256 | 21357429 | 21357256 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | CDS | 21357750 | 21357923 | 21357750 | ID=Msa1281650-mRNA-1:cds;Parent=Msa1281650-mRNA-1 |
| chr8_3 | three_prime_UTR | 21357924 | 21358076 | 21357924 | ID=Msa1281650-mRNA-1:three_prime_utr;Parent=Msa1281650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
