Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0517260 | XP_003627754.1 | 73.148 | 432 | 14 | 3 | 1 | 330 | 1 | 432 | 0.0 | 605 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0517260 | sp|Q9SXD5|GSXL3_ARATH | 39.720 | 428 | 143 | 7 | 4 | 319 | 13 | 437 | 5.03e-95 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0517260 | G7LEJ5 | 73.148 | 432 | 14 | 3 | 1 | 330 | 1 | 432 | 0.0 | 605 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0517260 | -0.829111 | 6.178436e-55 | -8.615850e-47 |
| Msa0018610 | Msa0517260 | -0.806746 | 7.082959e-50 | -8.615850e-47 |
| Msa0027020 | Msa0517260 | -0.819509 | 1.119141e-52 | -8.615850e-47 |
| Msa0042210 | Msa0517260 | -0.817571 | 3.077748e-52 | -8.615850e-47 |
| Msa0047560 | Msa0517260 | -0.803611 | 3.210226e-49 | -8.615850e-47 |
| Msa0075080 | Msa0517260 | -0.817597 | 3.036744e-52 | -8.615850e-47 |
| Msa0075820 | Msa0517260 | -0.818710 | 1.700318e-52 | -8.615850e-47 |
| Msa0076590 | Msa0517260 | -0.814539 | 1.463035e-51 | -8.615850e-47 |
| Msa0080100 | Msa0517260 | -0.843234 | 1.588628e-58 | -8.615850e-47 |
| Msa0093360 | Msa0517260 | -0.812740 | 3.642085e-51 | -8.615850e-47 |
| Msa0098380 | Msa0517260 | 0.803825 | 2.897296e-49 | -8.615850e-47 |
| Msa0107830 | Msa0517260 | 0.832347 | 9.959215e-56 | -8.615850e-47 |
| Msa0117650 | Msa0517260 | 0.841354 | 5.000075e-58 | -8.615850e-47 |
| Msa0122930 | Msa0517260 | -0.817342 | 3.465112e-52 | -8.615850e-47 |
| Msa0129770 | Msa0517260 | 0.817469 | 3.244394e-52 | -8.615850e-47 |
| Msa0134060 | Msa0517260 | 0.804739 | 1.869186e-49 | -8.615850e-47 |
| Msa0136090 | Msa0517260 | 0.811249 | 7.692987e-51 | -8.615850e-47 |
| Msa0143640 | Msa0517260 | 0.824169 | 9.336898e-54 | -8.615850e-47 |
| Msa0145990 | Msa0517260 | -0.810775 | 9.745304e-51 | -8.615850e-47 |
| Msa0150620 | Msa0517260 | 0.825559 | 4.387050e-54 | -8.615850e-47 |
| Msa0162170 | Msa0517260 | -0.828646 | 8.008776e-55 | -8.615850e-47 |
| Msa0167160 | Msa0517260 | -0.807896 | 4.040919e-50 | -8.615850e-47 |
| Msa0167570 | Msa0517260 | -0.823220 | 1.557615e-53 | -8.615850e-47 |
| Msa0168470 | Msa0517260 | -0.811575 | 6.536925e-51 | -8.615850e-47 |
| Msa0185040 | Msa0517260 | 0.823929 | 1.062831e-53 | -8.615850e-47 |
| Msa0186240 | Msa0517260 | 0.801660 | 8.106448e-49 | -8.615850e-47 |
| Msa0196580 | Msa0517260 | -0.812440 | 4.234765e-51 | -8.615850e-47 |
| Msa0211590 | Msa0517260 | -0.804097 | 2.543985e-49 | -8.615850e-47 |
| Msa0224180 | Msa0517260 | -0.811721 | 6.075653e-51 | -8.615850e-47 |
| Msa0225080 | Msa0517260 | -0.801689 | 7.996172e-49 | -8.615850e-47 |
| Msa0238460 | Msa0517260 | -0.830131 | 3.489363e-55 | -8.615850e-47 |
| Msa0380470 | Msa0517260 | -0.817674 | 2.917350e-52 | -8.615850e-47 |
| Msa0382050 | Msa0517260 | -0.820119 | 8.118156e-53 | -8.615850e-47 |
| Msa0386230 | Msa0517260 | -0.814714 | 1.338569e-51 | -8.615850e-47 |
| Msa0390200 | Msa0517260 | 0.833011 | 6.811415e-56 | -8.615850e-47 |
| Msa0390760 | Msa0517260 | -0.809233 | 2.093872e-50 | -8.615850e-47 |
| Msa0427230 | Msa0517260 | -0.807149 | 5.821464e-50 | -8.615850e-47 |
| Msa0428720 | Msa0517260 | -0.800043 | 1.734238e-48 | -8.615850e-47 |
| Msa0429990 | Msa0517260 | -0.802773 | 4.784976e-49 | -8.615850e-47 |
| Msa0431550 | Msa0517260 | -0.809130 | 2.202571e-50 | -8.615850e-47 |
| Msa0433090 | Msa0517260 | 0.819604 | 1.064578e-52 | -8.615850e-47 |
| Msa0436660 | Msa0517260 | -0.800778 | 1.228499e-48 | -8.615850e-47 |
| Msa0439090 | Msa0517260 | -0.808402 | 3.152210e-50 | -8.615850e-47 |
| Msa0439130 | Msa0517260 | -0.802223 | 6.211150e-49 | -8.615850e-47 |
| Msa0444770 | Msa0517260 | -0.806100 | 9.693529e-50 | -8.615850e-47 |
| Msa0459930 | Msa0517260 | 0.800941 | 1.137972e-48 | -8.615850e-47 |
| Msa0473740 | Msa0517260 | -0.810460 | 1.139896e-50 | -8.615850e-47 |
| Msa0474660 | Msa0517260 | -0.825315 | 5.012367e-54 | -8.615850e-47 |
| Msa0476560 | Msa0517260 | -0.803986 | 2.682247e-49 | -8.615850e-47 |
| Msa0253230 | Msa0517260 | -0.807353 | 5.268379e-50 | -8.615850e-47 |
| Msa0260050 | Msa0517260 | 0.810725 | 9.991150e-51 | -8.615850e-47 |
| Msa0261020 | Msa0517260 | -0.815025 | 1.141938e-51 | -8.615850e-47 |
| Msa0266150 | Msa0517260 | -0.801312 | 9.553342e-49 | -8.615850e-47 |
| Msa0266330 | Msa0517260 | -0.812968 | 3.245440e-51 | -8.615850e-47 |
| Msa0275730 | Msa0517260 | 0.829053 | 6.381879e-55 | -8.615850e-47 |
| Msa0275980 | Msa0517260 | -0.808372 | 3.199038e-50 | -8.615850e-47 |
| Msa0310190 | Msa0517260 | 0.804420 | 2.179149e-49 | -8.615850e-47 |
| Msa0310270 | Msa0517260 | -0.800791 | 1.220862e-48 | -8.615850e-47 |
| Msa0312300 | Msa0517260 | 0.815470 | 9.092092e-52 | -8.615850e-47 |
| Msa0316080 | Msa0517260 | -0.821732 | 3.452323e-53 | -8.615850e-47 |
| Msa0317820 | Msa0517260 | -0.801419 | 9.084427e-49 | -8.615850e-47 |
| Msa0321240 | Msa0517260 | 0.820097 | 8.209557e-53 | -8.615850e-47 |
| Msa0340700 | Msa0517260 | -0.803013 | 4.268351e-49 | -8.615850e-47 |
| Msa0341950 | Msa0517260 | -0.813104 | 3.030397e-51 | -8.615850e-47 |
| Msa0345050 | Msa0517260 | 0.809582 | 1.762226e-50 | -8.615850e-47 |
| Msa0345890 | Msa0517260 | 0.800097 | 1.690574e-48 | -8.615850e-47 |
| Msa0350180 | Msa0517260 | 0.803549 | 3.306081e-49 | -8.615850e-47 |
| Msa0490740 | Msa0517260 | -0.812635 | 3.839639e-51 | -8.615850e-47 |
| Msa0492330 | Msa0517260 | -0.820294 | 7.402512e-53 | -8.615850e-47 |
| Msa0500580 | Msa0517260 | -0.822396 | 2.422910e-53 | -8.615850e-47 |
| Msa0506700 | Msa0517260 | -0.822464 | 2.336590e-53 | -8.615850e-47 |
| Msa0517260 | Msa0517820 | -0.805111 | 1.563255e-49 | -8.615850e-47 |
| Msa0517260 | Msa0522170 | 0.804783 | 1.829807e-49 | -8.615850e-47 |
| Msa0517260 | Msa0524710 | 0.838140 | 3.431280e-57 | -8.615850e-47 |
| Msa0517260 | Msa0543010 | -0.804395 | 2.205209e-49 | -8.615850e-47 |
| Msa0517260 | Msa0549700 | -0.811307 | 7.474754e-51 | -8.615850e-47 |
| Msa0517260 | Msa0561450 | -0.806343 | 8.612715e-50 | -8.615850e-47 |
| Msa0517260 | Msa0561830 | 0.836880 | 7.221630e-57 | -8.615850e-47 |
| Msa0517260 | Msa0566530 | 0.805431 | 1.339223e-49 | -8.615850e-47 |
| Msa0517260 | Msa0570050 | 0.801127 | 1.042363e-48 | -8.615850e-47 |
| Msa0517260 | Msa0580840 | 0.821493 | 3.921780e-53 | -8.615850e-47 |
| Msa0517260 | Msa0580890 | -0.803187 | 3.928302e-49 | -8.615850e-47 |
| Msa0517260 | Msa0583270 | -0.803095 | 4.105933e-49 | -8.615850e-47 |
| Msa0517260 | Msa0597370 | -0.818893 | 1.545531e-52 | -8.615850e-47 |
| Msa0517260 | Msa0597800 | 0.820436 | 6.867465e-53 | -8.615850e-47 |
| Msa0517260 | Msa0597820 | 0.828851 | 7.143866e-55 | -8.615850e-47 |
| Msa0517260 | Msa0603600 | -0.803074 | 4.147401e-49 | -8.615850e-47 |
| Msa0517260 | Msa0606340 | -0.802562 | 5.290433e-49 | -8.615850e-47 |
| Msa0517260 | Msa0606350 | -0.805234 | 1.473163e-49 | -8.615850e-47 |
| Msa0517260 | Msa0608720 | -0.812294 | 4.557561e-51 | -8.615850e-47 |
| Msa0517260 | Msa0614960 | 0.805738 | 1.154583e-49 | -8.615850e-47 |
| Msa0517260 | Msa0615460 | -0.803271 | 3.774161e-49 | -8.615850e-47 |
| Msa0517260 | Msa0619960 | -0.806402 | 8.372200e-50 | -8.615850e-47 |
| Msa0517260 | Msa0620050 | -0.805166 | 1.522153e-49 | -8.615850e-47 |
| Msa0517260 | Msa0624360 | -0.810943 | 8.966254e-51 | -8.615850e-47 |
| Msa0517260 | Msa0628200 | 0.801735 | 7.826210e-49 | -8.615850e-47 |
| Msa0517260 | Msa0637590 | 0.830095 | 3.561865e-55 | -8.615850e-47 |
| Msa0517260 | Msa0637700 | 0.825078 | 5.702946e-54 | -8.615850e-47 |
| Msa0517260 | Msa0652590 | 0.809628 | 1.722452e-50 | -8.615850e-47 |
| Msa0517260 | Msa0654850 | -0.812738 | 3.644404e-51 | -8.615850e-47 |
| Msa0517260 | Msa0655370 | 0.839239 | 1.784674e-57 | -8.615850e-47 |
| Msa0517260 | Msa0655980 | -0.803319 | 3.689271e-49 | -8.615850e-47 |
| Msa0517260 | Msa0673620 | -0.821317 | 4.304916e-53 | -8.615850e-47 |
| Msa0517260 | Msa0695250 | -0.807398 | 5.154296e-50 | -8.615850e-47 |
| Msa0517260 | Msa0698510 | -0.806784 | 6.952060e-50 | -8.615850e-47 |
| Msa0517260 | Msa0698680 | -0.806642 | 7.449493e-50 | -8.615850e-47 |
| Msa0517260 | Msa0699170 | 0.817786 | 2.752832e-52 | -8.615850e-47 |
| Msa0517260 | Msa0699200 | -0.821522 | 3.862043e-53 | -8.615850e-47 |
| Msa0517260 | Msa0718770 | 0.804485 | 2.111621e-49 | -8.615850e-47 |
| Msa0517260 | Msa0727230 | 0.834033 | 3.787851e-56 | -8.615850e-47 |
| Msa0517260 | Msa0729740 | -0.814297 | 1.655212e-51 | -8.615850e-47 |
| Msa0517260 | Msa0739820 | -0.833681 | 4.638030e-56 | -8.615850e-47 |
| Msa0517260 | Msa0743370 | 0.807025 | 6.181372e-50 | -8.615850e-47 |
| Msa0517260 | Msa0751490 | -0.806270 | 8.923257e-50 | -8.615850e-47 |
| Msa0517260 | Msa0751510 | 0.824608 | 7.359721e-54 | -8.615850e-47 |
| Msa0517260 | Msa0755550 | -0.801286 | 9.673538e-49 | -8.615850e-47 |
| Msa0517260 | Msa0766910 | -0.809135 | 2.197088e-50 | -8.615850e-47 |
| Msa0517260 | Msa0784780 | -0.808653 | 2.786998e-50 | -8.615850e-47 |
| Msa0517260 | Msa0792490 | -0.804149 | 2.480895e-49 | -8.615850e-47 |
| Msa0517260 | Msa0795320 | 0.806398 | 8.385323e-50 | -8.615850e-47 |
| Msa0517260 | Msa0799150 | -0.807147 | 5.827019e-50 | -8.615850e-47 |
| Msa0517260 | Msa0802600 | 0.841140 | 5.692897e-58 | -8.615850e-47 |
| Msa0517260 | Msa0813710 | 0.800767 | 1.234963e-48 | -8.615850e-47 |
| Msa0517260 | Msa0820130 | -0.801672 | 8.060966e-49 | -8.615850e-47 |
| Msa0517260 | Msa0829250 | -0.813386 | 2.627358e-51 | -8.615850e-47 |
| Msa0517260 | Msa0829990 | 0.837014 | 6.673320e-57 | -8.615850e-47 |
| Msa0517260 | Msa0848270 | 0.809535 | 1.803753e-50 | -8.615850e-47 |
| Msa0517260 | Msa0855260 | 0.805235 | 1.472378e-49 | -8.615850e-47 |
| Msa0517260 | Msa0858250 | -0.809026 | 2.319013e-50 | -8.615850e-47 |
| Msa0517260 | Msa0868500 | -0.819461 | 1.147709e-52 | -8.615850e-47 |
| Msa0517260 | Msa0868510 | -0.815645 | 8.314865e-52 | -8.615850e-47 |
| Msa0517260 | Msa0868520 | -0.811607 | 6.432379e-51 | -8.615850e-47 |
| Msa0517260 | Msa0874750 | 0.820884 | 5.417326e-53 | -8.615850e-47 |
| Msa0517260 | Msa0882480 | -0.814557 | 1.450199e-51 | -8.615850e-47 |
| Msa0517260 | Msa0910560 | 0.805075 | 1.590119e-49 | -8.615850e-47 |
| Msa0517260 | Msa0925940 | 0.820599 | 6.298782e-53 | -8.615850e-47 |
| Msa0517260 | Msa0933320 | -0.804888 | 1.739874e-49 | -8.615850e-47 |
| Msa0517260 | Msa0941410 | -0.812957 | 3.264113e-51 | -8.615850e-47 |
| Msa0517260 | Msa0941420 | -0.823625 | 1.252376e-53 | -8.615850e-47 |
| Msa0517260 | Msa0945160 | -0.806078 | 9.794917e-50 | -8.615850e-47 |
| Msa0517260 | Msa0958960 | -0.807882 | 4.068507e-50 | -8.615850e-47 |
| Msa0517260 | Msa0964400 | -0.803145 | 4.009525e-49 | -8.615850e-47 |
| Msa0517260 | Msa0971100 | -0.800026 | 1.748113e-48 | -8.615850e-47 |
| Msa0517260 | Msa0973010 | -0.814541 | 1.462013e-51 | -8.615850e-47 |
| Msa0517260 | Msa0978540 | -0.831401 | 1.704979e-55 | -8.615850e-47 |
| Msa0517260 | Msa0978550 | -0.818211 | 2.205996e-52 | -8.615850e-47 |
| Msa0517260 | Msa0978560 | -0.815725 | 7.979648e-52 | -8.615850e-47 |
| Msa0517260 | Msa0984230 | -0.808584 | 2.882541e-50 | -8.615850e-47 |
| Msa0517260 | Msa0993710 | 0.802259 | 6.108400e-49 | -8.615850e-47 |
| Msa0517260 | Msa1002550 | -0.816720 | 4.780584e-52 | -8.615850e-47 |
| Msa0517260 | Msa1007900 | 0.814565 | 1.444438e-51 | -8.615850e-47 |
| Msa0517260 | Msa1027910 | 0.810880 | 9.252328e-51 | -8.615850e-47 |
| Msa0517260 | Msa1028890 | -0.800013 | 1.758996e-48 | -8.615850e-47 |
| Msa0517260 | Msa1030210 | 0.824270 | 8.841320e-54 | -8.615850e-47 |
| Msa0517260 | Msa1031190 | -0.815050 | 1.127202e-51 | -8.615850e-47 |
| Msa0517260 | Msa1035050 | 0.831550 | 1.566528e-55 | -8.615850e-47 |
| Msa0517260 | Msa1037440 | -0.815526 | 8.836790e-52 | -8.615850e-47 |
| Msa0517260 | Msa1045750 | -0.809894 | 1.509627e-50 | -8.615850e-47 |
| Msa0517260 | Msa1047390 | -0.804613 | 1.985891e-49 | -8.615850e-47 |
| Msa0517260 | Msa1058550 | -0.809029 | 2.315969e-50 | -8.615850e-47 |
| Msa0517260 | Msa1062290 | 0.802431 | 5.630079e-49 | -8.615850e-47 |
| Msa0517260 | Msa1069250 | 0.811696 | 6.153362e-51 | -8.615850e-47 |
| Msa0517260 | Msa1070370 | -0.813519 | 2.456770e-51 | -8.615850e-47 |
| Msa0517260 | Msa1075090 | 0.809818 | 1.567918e-50 | -8.615850e-47 |
| Msa0517260 | Msa1076530 | -0.803938 | 2.744661e-49 | -8.615850e-47 |
| Msa0517260 | Msa1078120 | -0.820516 | 6.583530e-53 | -8.615850e-47 |
| Msa0517260 | Msa1084890 | 0.823623 | 1.253710e-53 | -8.615850e-47 |
| Msa0517260 | Msa1085820 | 0.826667 | 2.392302e-54 | -8.615850e-47 |
| Msa0517260 | Msa1095880 | -0.807717 | 4.411215e-50 | -8.615850e-47 |
| Msa0517260 | Msa1102410 | -0.821263 | 4.431555e-53 | -8.615850e-47 |
| Msa0517260 | Msa1107220 | 0.803404 | 3.543255e-49 | -8.615850e-47 |
| Msa0517260 | Msa1119420 | -0.808786 | 2.609716e-50 | -8.615850e-47 |
| Msa0517260 | Msa1120580 | 0.812772 | 3.583444e-51 | -8.615850e-47 |
| Msa0517260 | Msa1120960 | 0.840230 | 9.852353e-58 | -8.615850e-47 |
| Msa0517260 | Msa1123260 | -0.813415 | 2.589271e-51 | -8.615850e-47 |
| Msa0517260 | Msa1130150 | -0.812542 | 4.023397e-51 | -8.615850e-47 |
| Msa0517260 | Msa1131120 | 0.812006 | 5.267129e-51 | -8.615850e-47 |
| Msa0517260 | Msa1131300 | -0.807807 | 4.220989e-50 | -8.615850e-47 |
| Msa0517260 | Msa1134800 | -0.807941 | 3.952728e-50 | -8.615850e-47 |
| Msa0517260 | Msa1134840 | -0.804903 | 1.727673e-49 | -8.615850e-47 |
| Msa0517260 | Msa1136630 | 0.812534 | 4.040580e-51 | -8.615850e-47 |
| Msa0517260 | Msa1136690 | 0.823680 | 1.216098e-53 | -8.615850e-47 |
| Msa0517260 | Msa1136760 | 0.832497 | 9.138841e-56 | -8.615850e-47 |
| Msa0517260 | Msa1137750 | 0.807188 | 5.710798e-50 | -8.615850e-47 |
| Msa0517260 | Msa1148100 | -0.804959 | 1.681434e-49 | -8.615850e-47 |
| Msa0517260 | Msa1156100 | -0.812372 | 4.382044e-51 | -8.615850e-47 |
| Msa0517260 | Msa1158180 | -0.811431 | 7.025210e-51 | -8.615850e-47 |
| Msa0517260 | Msa1161060 | -0.810335 | 1.212962e-50 | -8.615850e-47 |
| Msa0517260 | Msa1185270 | 0.827405 | 1.592808e-54 | -8.615850e-47 |
| Msa0517260 | Msa1186150 | 0.866287 | 3.183949e-65 | -8.615850e-47 |
| Msa0517260 | Msa1186430 | 0.805726 | 1.161559e-49 | -8.615850e-47 |
| Msa0517260 | Msa1190300 | -0.804016 | 2.644401e-49 | -8.615850e-47 |
| Msa0517260 | Msa1191270 | 0.825047 | 5.799000e-54 | -8.615850e-47 |
| Msa0517260 | Msa1202110 | 0.800070 | 1.712612e-48 | -8.615850e-47 |
| Msa0517260 | Msa1203320 | -0.821540 | 3.825123e-53 | -8.615850e-47 |
| Msa0517260 | Msa1211610 | 0.806862 | 6.694279e-50 | -8.615850e-47 |
| Msa0517260 | Msa1222900 | -0.814724 | 1.331628e-51 | -8.615850e-47 |
| Msa0517260 | Msa1223990 | 0.816352 | 5.780130e-52 | -8.615850e-47 |
| Msa0517260 | Msa1228260 | -0.808136 | 3.591438e-50 | -8.615850e-47 |
| Msa0517260 | Msa1239190 | 0.805822 | 1.108625e-49 | -8.615850e-47 |
| Msa0517260 | Msa1239210 | 0.810895 | 9.179062e-51 | -8.615850e-47 |
| Msa0517260 | Msa1244940 | -0.801420 | 9.079724e-49 | -8.615850e-47 |
| Msa0517260 | Msa1254870 | 0.803322 | 3.683522e-49 | -8.615850e-47 |
| Msa0517260 | Msa1259570 | 0.810871 | 9.293028e-51 | -8.615850e-47 |
| Msa0517260 | Msa1269730 | -0.805411 | 1.352678e-49 | -8.615850e-47 |
| Msa0517260 | Msa1271220 | -0.808220 | 3.446467e-50 | -8.615850e-47 |
| Msa0517260 | Msa1279060 | 0.805160 | 1.526489e-49 | -8.615850e-47 |
| Msa0517260 | Msa1281650 | 0.864314 | 1.328926e-64 | -8.615850e-47 |
| Msa0517260 | Msa1299480 | 0.800551 | 1.366485e-48 | -8.615850e-47 |
| Msa0517260 | Msa1303400 | 0.812537 | 4.033972e-51 | -8.615850e-47 |
| Msa0517260 | Msa1303690 | -0.806251 | 9.005342e-50 | -8.615850e-47 |
| Msa0517260 | Msa1317740 | 0.805848 | 1.094990e-49 | -8.615850e-47 |
| Msa0517260 | Msa1319100 | 0.803114 | 4.069129e-49 | -8.615850e-47 |
| Msa0517260 | Msa1320160 | 0.813846 | 2.081880e-51 | -8.615850e-47 |
| Msa0517260 | Msa1325260 | -0.806951 | 6.408716e-50 | -8.615850e-47 |
| Msa0517260 | Msa1328430 | 0.803254 | 3.806552e-49 | -8.615850e-47 |
| Msa0517260 | Msa1330080 | -0.816492 | 5.379085e-52 | -8.615850e-47 |
| Msa0517260 | Msa1341710 | -0.803844 | 2.871829e-49 | -8.615850e-47 |
| Msa0517260 | Msa1350590 | -0.813407 | 2.599796e-51 | -8.615850e-47 |
| Msa0517260 | Msa1357570 | 0.800622 | 1.322142e-48 | -8.615850e-47 |
| Msa0517260 | Msa1363170 | -0.808803 | 2.588236e-50 | -8.615850e-47 |
| Msa0517260 | Msa1364690 | 0.839314 | 1.706295e-57 | -8.615850e-47 |
| Msa0517260 | Msa1372460 | -0.806558 | 7.759901e-50 | -8.615850e-47 |
| Msa0517260 | Msa1373930 | -0.804159 | 2.468912e-49 | -8.615850e-47 |
| Msa0517260 | Msa1390200 | 0.815002 | 1.155191e-51 | -8.615850e-47 |
| Msa0517260 | Msa1395250 | 0.822611 | 2.159465e-53 | -8.615850e-47 |
| Msa0517260 | Msa1395380 | -0.808119 | 3.621595e-50 | -8.615850e-47 |
| Msa0517260 | Msa1398140 | 0.824130 | 9.536838e-54 | -8.615850e-47 |
| Msa0517260 | Msa1405040 | -0.846877 | 1.648292e-59 | -8.615850e-47 |
| Msa0517260 | Msa1408230 | -0.809730 | 1.637428e-50 | -8.615850e-47 |
| Msa0517260 | Msa1415510 | -0.803316 | 3.695442e-49 | -8.615850e-47 |
| Msa0517260 | Msa1437590 | 0.837830 | 4.122873e-57 | -8.615850e-47 |
| Msa0517260 | Msa1453890 | 0.826304 | 2.920051e-54 | -8.615850e-47 |
| Msa0517260 | Msa1454300 | -0.806626 | 7.509194e-50 | -8.615850e-47 |
| Msa0517260 | Msa1455200 | 0.825996 | 3.456382e-54 | -8.615850e-47 |
| Msa0517260 | Msa1462700 | -0.835496 | 1.622670e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0517260 | MtrunA17_Chr8g0352461 | 73.148 | 432 | 14 | 3 | 1 | 330 | 1 | 432 | 0.0 | 605 |
| Msa0517260 | MtrunA17_Chr8g0352481 | 67.053 | 431 | 41 | 2 | 1 | 330 | 1 | 431 | 0.0 | 563 |
| Msa0517260 | MtrunA17_Chr5g0399001 | 39.907 | 431 | 147 | 8 | 4 | 325 | 33 | 460 | 2.55e-91 | 280 |
| Msa0517260 | MtrunA17_Chr3g0091441 | 30.856 | 444 | 180 | 13 | 4 | 330 | 13 | 446 | 1.36e-51 | 177 |
| Msa0517260 | MtrunA17_Chr3g0139441 | 28.272 | 191 | 107 | 6 | 6 | 192 | 41 | 205 | 4.97e-15 | 75.5 |
| Msa0517260 | MtrunA17_Chr2g0301471 | 26.923 | 208 | 100 | 6 | 3 | 183 | 13 | 195 | 1.37e-14 | 74.3 |
| Msa0517260 | MtrunA17_Chr2g0301661 | 27.404 | 208 | 99 | 7 | 3 | 183 | 13 | 195 | 6.77e-14 | 72.4 |
| Msa0517260 | MtrunA17_Chr2g0304651 | 27.751 | 209 | 99 | 7 | 3 | 183 | 4 | 188 | 6.64e-13 | 69.3 |
| Msa0517260 | MtrunA17_Chr2g0305211 | 25.000 | 208 | 104 | 7 | 4 | 183 | 5 | 188 | 2.04e-11 | 64.7 |
| Msa0517260 | MtrunA17_Chr2g0305231 | 25.000 | 208 | 104 | 7 | 4 | 183 | 5 | 188 | 2.04e-11 | 64.7 |
| Msa0517260 | MtrunA17_Chr2g0304721 | 26.794 | 209 | 101 | 7 | 3 | 183 | 4 | 188 | 2.76e-11 | 64.3 |
| Msa0517260 | MtrunA17_Chr1g0148801 | 23.280 | 189 | 115 | 6 | 6 | 192 | 18 | 178 | 4.39e-11 | 63.5 |
| Msa0517260 | MtrunA17_Chr7g0268621 | 25.641 | 195 | 112 | 6 | 4 | 192 | 6 | 173 | 4.69e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0517260 | AT1G62620.1 | 39.720 | 428 | 143 | 7 | 4 | 319 | 13 | 437 | 5.11e-96 | 292 |
| Msa0517260 | AT1G63370.1 | 39.486 | 428 | 144 | 7 | 4 | 319 | 13 | 437 | 1.98e-94 | 288 |
| Msa0517260 | AT1G12140.1 | 40.330 | 424 | 147 | 4 | 2 | 319 | 11 | 434 | 8.08e-94 | 286 |
| Msa0517260 | AT1G12140.3 | 40.330 | 424 | 147 | 4 | 2 | 319 | 11 | 434 | 8.08e-94 | 286 |
| Msa0517260 | AT1G65860.1 | 36.817 | 421 | 160 | 4 | 4 | 318 | 13 | 433 | 2.48e-92 | 283 |
| Msa0517260 | AT1G62540.3 | 40.199 | 403 | 153 | 5 | 4 | 318 | 13 | 415 | 2.81e-92 | 282 |
| Msa0517260 | AT1G12200.1 | 39.627 | 429 | 144 | 8 | 4 | 319 | 14 | 440 | 8.04e-92 | 281 |
| Msa0517260 | AT1G12160.1 | 37.156 | 436 | 153 | 7 | 4 | 318 | 12 | 447 | 4.01e-91 | 280 |
| Msa0517260 | AT1G12140.2 | 39.858 | 424 | 147 | 5 | 2 | 319 | 11 | 432 | 2.60e-90 | 277 |
| Msa0517260 | AT1G62540.1 | 38.480 | 421 | 153 | 5 | 4 | 318 | 13 | 433 | 2.59e-89 | 275 |
| Msa0517260 | AT1G62560.1 | 36.493 | 422 | 161 | 5 | 4 | 318 | 13 | 434 | 4.90e-89 | 274 |
| Msa0517260 | AT1G62580.2 | 39.529 | 425 | 147 | 7 | 4 | 319 | 14 | 437 | 5.30e-89 | 274 |
| Msa0517260 | AT1G62600.1 | 38.876 | 427 | 150 | 5 | 4 | 319 | 13 | 439 | 9.56e-89 | 273 |
| Msa0517260 | AT1G62570.1 | 38.005 | 421 | 155 | 4 | 4 | 318 | 13 | 433 | 4.59e-86 | 266 |
| Msa0517260 | AT1G12130.1 | 38.170 | 448 | 148 | 9 | 4 | 327 | 13 | 455 | 3.40e-85 | 265 |
| Msa0517260 | AT1G62620.2 | 40.000 | 375 | 116 | 5 | 4 | 269 | 13 | 387 | 4.30e-83 | 257 |
| Msa0517260 | AT1G62560.2 | 37.401 | 377 | 129 | 5 | 4 | 273 | 13 | 389 | 4.49e-80 | 249 |
| Msa0517260 | AT1G62600.2 | 39.523 | 377 | 117 | 5 | 4 | 269 | 13 | 389 | 2.96e-77 | 242 |
| Msa0517260 | AT1G63340.1 | 38.560 | 389 | 161 | 7 | 4 | 319 | 14 | 397 | 1.84e-75 | 238 |
| Msa0517260 | AT5G61290.1 | 35.185 | 432 | 157 | 7 | 4 | 318 | 16 | 441 | 2.28e-73 | 234 |
| Msa0517260 | AT1G63370.2 | 44.928 | 276 | 93 | 4 | 4 | 220 | 13 | 288 | 1.85e-70 | 223 |
| Msa0517260 | AT1G12200.2 | 45.683 | 278 | 89 | 5 | 4 | 220 | 14 | 290 | 2.54e-68 | 218 |
| Msa0517260 | AT5G07800.1 | 33.487 | 433 | 167 | 9 | 3 | 318 | 15 | 443 | 5.62e-66 | 215 |
| Msa0517260 | AT1G62580.3 | 44.755 | 286 | 89 | 5 | 4 | 220 | 14 | 299 | 3.34e-65 | 210 |
| Msa0517260 | AT1G62580.1 | 44.755 | 286 | 89 | 5 | 4 | 220 | 14 | 299 | 1.86e-64 | 212 |
| Msa0517260 | AT1G62580.1 | 39.604 | 101 | 58 | 2 | 221 | 319 | 371 | 470 | 7.88e-17 | 81.6 |
| Msa0517260 | AT1G62540.2 | 44.689 | 273 | 95 | 4 | 4 | 220 | 13 | 285 | 1.73e-63 | 209 |
| Msa0517260 | AT1G62540.2 | 40.816 | 98 | 58 | 0 | 221 | 318 | 361 | 458 | 4.11e-21 | 94.0 |
| Msa0517260 | AT1G63390.1 | 59.441 | 143 | 50 | 2 | 4 | 138 | 13 | 155 | 1.02e-43 | 148 |
| Msa0517260 | AT1G19250.1 | 31.401 | 207 | 92 | 7 | 3 | 183 | 12 | 194 | 3.88e-16 | 79.7 |
| Msa0517260 | AT5G45180.1 | 29.612 | 206 | 95 | 9 | 3 | 183 | 12 | 192 | 1.94e-11 | 65.1 |
| Msa0517260 | AT4G13260.2 | 24.868 | 189 | 116 | 5 | 6 | 192 | 30 | 194 | 8.58e-11 | 62.4 |
Find 105 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCAATCCATGGAGGAAAA+TGG | 0.199770 | 3_4:+68759960 | Msa0517260:CDS |
| GAGGATCAGAGTCTGATTTA+TGG | 0.233873 | 3_4:-68755534 | None:intergenic |
| CTAAAACAATCTTGTCTTGA+TGG | 0.239083 | 3_4:+68755387 | Msa0517260:exon |
| ATGAATGGGATGATAATTAT+TGG | 0.261638 | 3_4:+68760456 | Msa0517260:CDS |
| CGGTGATCCAAGAACGTTTC+CGG | 0.270104 | 3_4:+68755672 | Msa0517260:CDS |
| TCATGACCCGGAAACGTTCT+TGG | 0.312023 | 3_4:-68755679 | None:intergenic |
| CCGAGACTTGCTGTGGTTCC+TGG | 0.312779 | 3_4:+68755889 | Msa0517260:CDS |
| GCAGGTGAGTTTGGAATTCA+TGG | 0.327882 | 3_4:+68755730 | Msa0517260:CDS |
| CTGGTTGGGTCTATGCTTAG+AGG | 0.342999 | 3_4:-68755553 | None:intergenic |
| TCCACCATCTCTTCTTCATT+AGG | 0.344321 | 3_4:-68759921 | None:intergenic |
| CACAACCTCCGTTTCAAATC+GGG | 0.355594 | 3_4:-68755758 | None:intergenic |
| AGGATCAGAGTCTGATTTAT+GGG | 0.356943 | 3_4:-68755533 | None:intergenic |
| GGCTGCCTCCATTGGAAGAT+TGG | 0.357111 | 3_4:+68760372 | Msa0517260:CDS |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.361488 | 3_4:-68755568 | None:intergenic |
| TTACCCTGTACAGTGAATTA+TGG | 0.368004 | 3_4:-68757031 | None:intergenic |
| TCACAACCTCCGTTTCAAAT+CGG | 0.383633 | 3_4:-68755759 | None:intergenic |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 3_4:-68755567 | None:intergenic |
| TTGAGAGGAAAGGGAAGGAC+TGG | 0.404651 | 3_4:+68755785 | Msa0517260:CDS |
| CAATCTTCCAAGACATATCA+TGG | 0.411970 | 3_4:+68755615 | Msa0517260:CDS |
| ATCAATCCATGGAGGAAAAT+GGG | 0.434145 | 3_4:+68759961 | Msa0517260:CDS |
| CCTGGTATTGAAAACTTTGG+TGG | 0.434447 | 3_4:+68755907 | Msa0517260:CDS |
| GGTGATCCAAGAACGTTTCC+GGG | 0.437865 | 3_4:+68755673 | Msa0517260:CDS |
| ACAGATTGGGCTGCCTCCAT+TGG | 0.441401 | 3_4:+68760364 | Msa0517260:CDS |
| TTGTGAAAGTTGAGAGGAAA+GGG | 0.443373 | 3_4:+68755776 | Msa0517260:CDS |
| GAAGCGGTTGTTGTATGTTC+CGG | 0.443409 | 3_4:+68755853 | Msa0517260:CDS |
| TGGATCACCGGATTCTCGCT+TGG | 0.443511 | 3_4:-68755659 | None:intergenic |
| CGGATTCTCGCTTGGACAAA+GGG | 0.444441 | 3_4:-68755651 | None:intergenic |
| GGACTGGGTGGTTGAGTCTA+GGG | 0.447799 | 3_4:+68755801 | Msa0517260:CDS |
| CCTTTGTCCAAGCGAGAATC+CGG | 0.450017 | 3_4:+68755652 | Msa0517260:CDS |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 3_4:+68756988 | Msa0517260:CDS |
| GCCTTCCTGCTGTAGCTCCT+TGG | 0.455974 | 3_4:-68755455 | None:intergenic |
| GCTGCTGTGAACTGTTTCTC+TGG | 0.457113 | 3_4:-68755572 | None:intergenic |
| TTGGAGGGACAATATGTTGA+TGG | 0.458426 | 3_4:+68760391 | Msa0517260:CDS |
| CATTGGCTAGTGGAACAGAT+TGG | 0.461510 | 3_4:+68760350 | Msa0517260:CDS |
| AGGACTGGGTGGTTGAGTCT+AGG | 0.462432 | 3_4:+68755800 | Msa0517260:CDS |
| CATGATATGTCTTGGAAGAT+TGG | 0.466055 | 3_4:-68755614 | None:intergenic |
| ATTAAATGGGTATATGAAGA+TGG | 0.468772 | 3_4:+68756967 | Msa0517260:CDS |
| CTCCGGTATGGTTGCCGCCA+AGG | 0.471770 | 3_4:+68755438 | Msa0517260:CDS |
| GTGATCGGCGCCGGAGTCTC+CGG | 0.474098 | 3_4:+68755421 | Msa0517260:CDS |
| CCGGATTCTCGCTTGGACAA+AGG | 0.477123 | 3_4:-68755652 | None:intergenic |
| TGAATGGGATGATAATTATT+GGG | 0.478067 | 3_4:+68760457 | Msa0517260:CDS |
| TGATTTATGGGTGTATATCC+AGG | 0.485907 | 3_4:-68755521 | None:intergenic |
| TGAAATGTTTAGAGATGAAT+GGG | 0.486215 | 3_4:+68760442 | Msa0517260:CDS |
| ATTGGCTAGTGGAACAGATT+GGG | 0.486382 | 3_4:+68760351 | Msa0517260:CDS |
| TCCTCATTCTTTCAAAGACC+AGG | 0.488385 | 3_4:+68755960 | Msa0517260:CDS |
| TGAGAGGAAAGGGAAGGACT+GGG | 0.494040 | 3_4:+68755786 | Msa0517260:CDS |
| AAGAACCCCATGATATGTCT+TGG | 0.495350 | 3_4:-68755622 | None:intergenic |
| TGGGTTGACCCGATTTGAAA+CGG | 0.496788 | 3_4:+68755750 | Msa0517260:CDS |
| CTCCTTGGCGGCAACCATAC+CGG | 0.502506 | 3_4:-68755440 | None:intergenic |
| ATAAGCGTACACACTTGTAA+TGG | 0.511154 | 3_4:-68760014 | None:intergenic |
| ATGAAATGTTTAGAGATGAA+TGG | 0.514327 | 3_4:+68760441 | Msa0517260:CDS |
| TTTACCTAATGAAGAAGAGA+TGG | 0.521069 | 3_4:+68759917 | Msa0517260:CDS |
| AGCTTGTCATACTCATGGTT+AGG | 0.525599 | 3_4:-68755284 | None:intergenic |
| TACAAGCCAAGTGGATTGCT+AGG | 0.525933 | 3_4:+68759874 | Msa0517260:CDS |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.527688 | 3_4:+68755406 | Msa0517260:CDS |
| TGCCTCCATTGGAAGATTGG+AGG | 0.528808 | 3_4:+68760375 | Msa0517260:CDS |
| GTTCCTGGTATTGAAAACTT+TGG | 0.530343 | 3_4:+68755904 | Msa0517260:CDS |
| ACAACCGCGTCGGAGGAACC+TGG | 0.530565 | 3_4:+68755503 | Msa0517260:CDS |
| GATGCCATAATTCACTGTAC+AGG | 0.531205 | 3_4:+68757027 | Msa0517260:CDS |
| TGCCGCCAAGGAGCTACAGC+AGG | 0.535450 | 3_4:+68755450 | Msa0517260:CDS |
| CAGGTGAGTTTGGAATTCAT+GGG | 0.536690 | 3_4:+68755731 | Msa0517260:CDS |
| CGGAAACGTTCTTGGATCAC+CGG | 0.540881 | 3_4:-68755671 | None:intergenic |
| TAAAGATTTCTATCAATCCA+TGG | 0.542834 | 3_4:+68759950 | Msa0517260:CDS |
| TTCCTGCTGTAGCTCCTTGG+CGG | 0.544190 | 3_4:-68755452 | None:intergenic |
| TTGTCATACTCATGGTTAGG+TGG | 0.544927 | 3_4:-68755281 | None:intergenic |
| GGCAACCATACCGGAGACTC+CGG | 0.546270 | 3_4:-68755431 | None:intergenic |
| TGTCATACTCATGGTTAGGT+GGG | 0.559411 | 3_4:-68755280 | None:intergenic |
| CGAAGCACTTCTTCATGACC+CGG | 0.562385 | 3_4:-68755691 | None:intergenic |
| CGGCGCCGGAGTCTCCGGTA+TGG | 0.563529 | 3_4:+68755426 | Msa0517260:CDS |
| ACAAGCCAAGTGGATTGCTA+GGG | 0.564142 | 3_4:+68759875 | Msa0517260:CDS |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 3_4:+68755412 | Msa0517260:CDS |
| ACCTGGTCTTTGAAAGAATG+AGG | 0.566279 | 3_4:-68755961 | None:intergenic |
| GCCTCCATTGGAAGATTGGA+GGG | 0.571840 | 3_4:+68760376 | Msa0517260:CDS |
| ATGGGTATATGAAGATGGCT+TGG | 0.572954 | 3_4:+68756972 | Msa0517260:CDS |
| GAGAAGAACAACCGCGTCGG+AGG | 0.573075 | 3_4:+68755496 | Msa0517260:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.575571 | 3_4:-68756998 | None:intergenic |
| TAACCATGAGTATGACAAGC+TGG | 0.576655 | 3_4:+68755286 | Msa0517260:five_prime_UTR |
| AAGTGAATGAGTTTGACGCT+TGG | 0.585404 | 3_4:-68759988 | None:intergenic |
| TCTCGGTTCTACAAAATGAC+CGG | 0.590082 | 3_4:-68755872 | None:intergenic |
| CGGAGGTTGTGAAAGTTGAG+AGG | 0.596521 | 3_4:+68755770 | Msa0517260:CDS |
| AATCTTCCAAGACATATCAT+GGG | 0.597490 | 3_4:+68755616 | Msa0517260:CDS |
| GTTGTGAAAGTTGAGAGGAA+AGG | 0.600631 | 3_4:+68755775 | Msa0517260:CDS |
| GATCCAGCTTGTCATACTCA+TGG | 0.602437 | 3_4:-68755289 | None:intergenic |
| CCAGGAACCACAGCAAGTCT+CGG | 0.606257 | 3_4:-68755889 | None:intergenic |
| ACCTAATGAAGAAGAGATGG+TGG | 0.606348 | 3_4:+68759920 | Msa0517260:CDS |
| GACTGGGTGGTTGAGTCTAG+GGG | 0.610465 | 3_4:+68755802 | Msa0517260:CDS |
| TTGTCCCTCCAATCTTCCAA+TGG | 0.611794 | 3_4:-68760380 | None:intergenic |
| TGTAGAACCGAGACTTGCTG+TGG | 0.612501 | 3_4:+68755882 | Msa0517260:CDS |
| GCCAAGGAGCTACAGCAGGA+AGG | 0.614388 | 3_4:+68755454 | Msa0517260:CDS |
| GTCAGGGTGACTACAAACAT+TGG | 0.621125 | 3_4:+68760333 | Msa0517260:intron |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.623772 | 3_4:+68755837 | Msa0517260:CDS |
| ATGCCATAATTCACTGTACA+GGG | 0.625503 | 3_4:+68757028 | Msa0517260:CDS |
| TGACTACAAACATTGGCTAG+TGG | 0.629841 | 3_4:+68760340 | Msa0517260:CDS |
| TCCCTCCAATCTTCCAATGG+AGG | 0.630473 | 3_4:-68760377 | None:intergenic |
| GAAAGTTGAGAGGAAAGGGA+AGG | 0.634946 | 3_4:+68755780 | Msa0517260:CDS |
| GAGGAAAGGGAAGGACTGGG+TGG | 0.638915 | 3_4:+68755789 | Msa0517260:CDS |
| TGATTGAGTTACAAGCCAAG+TGG | 0.640201 | 3_4:+68759865 | Msa0517260:CDS |
| TAAAACCCTAGCAATCCACT+TGG | 0.647424 | 3_4:-68759880 | None:intergenic |
| TGGGTGGTTGAGTCTAGGGG+AGG | 0.649211 | 3_4:+68755805 | Msa0517260:CDS |
| ATATCCAGGTTCCTCCGACG+CGG | 0.654542 | 3_4:-68755507 | None:intergenic |
| TTTGAGAAGAACAACCGCGT+CGG | 0.657447 | 3_4:+68755493 | Msa0517260:CDS |
| ATCTTCCAAGACATATCATG+GGG | 0.677371 | 3_4:+68755617 | Msa0517260:CDS |
| TGGGATGCTATCATACAGAG+TGG | 0.690605 | 3_4:+68760476 | Msa0517260:CDS |
| GTTGACCCGATTTGAAACGG+AGG | 0.693725 | 3_4:+68755753 | Msa0517260:CDS |
| AGATTTCTATCAATCCATGG+AGG | 0.738259 | 3_4:+68759953 | Msa0517260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATCTTTTTTTTTTTTTG+TGG | - | chr3_4:68756184-68756203 | None:intergenic | 10.0% |
| !!! | TATTTTTTTCCAATATAAAT+AGG | + | chr3_4:68756249-68756268 | Msa0517260:intron | 10.0% |
| !!! | AAAAAAAATTCAAGTTTATA+GGG | - | chr3_4:68757303-68757322 | None:intergenic | 10.0% |
| !!! | AAAAAAAAATTCAAGTTTAT+AGG | - | chr3_4:68757304-68757323 | None:intergenic | 10.0% |
| !!! | AAATTATATCATTAATTTGA+AGG | - | chr3_4:68759061-68759080 | None:intergenic | 10.0% |
| !! | AACGTAATAAATAAAAAAGT+TGG | - | chr3_4:68756226-68756245 | None:intergenic | 15.0% |
| !!! | TAGAATTTTCCTATTTATAT+TGG | - | chr3_4:68756261-68756280 | None:intergenic | 15.0% |
| !! | ATATAAATAGGAAAATTCTA+TGG | + | chr3_4:68756261-68756280 | Msa0517260:intron | 15.0% |
| !! | TTGGTATGTAAAATTTATTA+TGG | + | chr3_4:68756868-68756887 | Msa0517260:intron | 15.0% |
| !! | AGAAAAATATGTGAAAATTA+AGG | - | chr3_4:68757080-68757099 | None:intergenic | 15.0% |
| !! | ATTGATCAAATAAATCTTTA+TGG | + | chr3_4:68757370-68757389 | Msa0517260:intron | 15.0% |
| !! | AGGTATTAAAAATTGTAAAT+TGG | + | chr3_4:68757690-68757709 | Msa0517260:intron | 15.0% |
| !!! | TGATATAATTTTTATAATGC+AGG | + | chr3_4:68759070-68759089 | Msa0517260:intron | 15.0% |
| !!! | AGATAATTTTTTTACAAAGA+AGG | - | chr3_4:68759144-68759163 | None:intergenic | 15.0% |
| !! | ATATTTCATATTTATCAACA+AGG | - | chr3_4:68759171-68759190 | None:intergenic | 15.0% |
| !!! | AATAGAATTTTTATGACAAT+AGG | + | chr3_4:68759256-68759275 | Msa0517260:intron | 15.0% |
| !!! | TATAAATTTTTAAGTTTAGG+AGG | + | chr3_4:68759331-68759350 | Msa0517260:intron | 15.0% |
| !! | TAATTATATACAGAGTAAAT+AGG | - | chr3_4:68759534-68759553 | None:intergenic | 15.0% |
| !! | AAATTAATAAAAAATTGTCG+TGG | + | chr3_4:68759822-68759841 | Msa0517260:intron | 15.0% |
| !!! | TTATTTTTCTCTTCATTTTA+CGG | + | chr3_4:68760033-68760052 | Msa0517260:intron | 15.0% |
| !!! | AACATTCATGACTAATTTTA+AGG | - | chr3_4:68756129-68756148 | None:intergenic | 20.0% |
| !!! | TACAAGTACTATTTTATTGT+TGG | - | chr3_4:68756534-68756553 | None:intergenic | 20.0% |
| !! | TGTTAAGTAGAAATTATCAA+GGG | - | chr3_4:68756697-68756716 | None:intergenic | 20.0% |
| !!! | AAATTTTACATACCAAAGTA+TGG | - | chr3_4:68756864-68756883 | None:intergenic | 20.0% |
| !! | ATCAATTAGAAATTTAGAAG+AGG | - | chr3_4:68757105-68757124 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGTTAACTGTTTA+CGG | + | chr3_4:68757230-68757249 | Msa0517260:intron | 20.0% |
| !! | ATTGGTCATATAAATCTTTA+TGG | + | chr3_4:68757412-68757431 | Msa0517260:intron | 20.0% |
| !!! | TAACCTATGAATTTTCTTTA+TGG | - | chr3_4:68757560-68757579 | None:intergenic | 20.0% |
| !! | AATTTGCAACTTAATTATGT+TGG | + | chr3_4:68757620-68757639 | Msa0517260:intron | 20.0% |
| !! | TTATAAAGTTACATCATCAT+TGG | + | chr3_4:68757749-68757768 | Msa0517260:intron | 20.0% |
| !! | ATTACACAGAAAATTGTTTA+AGG | - | chr3_4:68758650-68758669 | None:intergenic | 20.0% |
| !! | GCCATATCTATTAAATAAAA+AGG | + | chr3_4:68759097-68759116 | Msa0517260:intron | 20.0% |
| !!! | GCCTTTTTATTTAATAGATA+TGG | - | chr3_4:68759101-68759120 | None:intergenic | 20.0% |
| !!! | AAATAAAAAGGCTTTTAGTT+TGG | + | chr3_4:68759109-68759128 | Msa0517260:intron | 20.0% |
| !!! | ATTTTTCTGTTAACTGTTTA+CGG | - | chr3_4:68757230-68757249 | None:intergenic | 20.0% |
| !! | CAGTTAACAGAAAAATTTAA+CGG | + | chr3_4:68759407-68759426 | Msa0517260:intron | 20.0% |
| !!! | TTTGAAGTTTTGTTAATTTC+AGG | + | chr3_4:68759470-68759489 | Msa0517260:intron | 20.0% |
| !!! | TTGAAGTTTTGTTAATTTCA+GGG | + | chr3_4:68759471-68759490 | Msa0517260:intron | 20.0% |
| !!! | ATTAACGAAACTTACAATTT+TGG | + | chr3_4:68759498-68759517 | Msa0517260:intron | 20.0% |
| !! | CTGTATATAATTAATGATTG+AGG | + | chr3_4:68759541-68759560 | Msa0517260:intron | 20.0% |
| !! | CATATAAATCATAATATGAC+AGG | + | chr3_4:68759564-68759583 | Msa0517260:intron | 20.0% |
| !! | ACAATTGTCAAATTTGTAAT+TGG | - | chr3_4:68760255-68760274 | None:intergenic | 20.0% |
| !! | TACAAATTTGACAATTGTAA+AGG | + | chr3_4:68760257-68760276 | Msa0517260:intron | 20.0% |
| !! | ACAAATTTGACAATTGTAAA+GGG | + | chr3_4:68760258-68760277 | Msa0517260:intron | 20.0% |
| !! | ATTTACAAAATTACTTTGTC+AGG | + | chr3_4:68760316-68760335 | Msa0517260:intron | 20.0% |
| !! | TTTACAAAATTACTTTGTCA+GGG | + | chr3_4:68760317-68760336 | Msa0517260:intron | 20.0% |
| ! | TTCAGATTACTTGATTGAAT+AGG | + | chr3_4:68756014-68756033 | Msa0517260:intron | 25.0% |
| !! | CATACTTTTGTATATGTGAA+AGG | - | chr3_4:68756106-68756125 | None:intergenic | 25.0% |
| ! | AAATTAGTCATGAATGTTCA+AGG | + | chr3_4:68756131-68756150 | Msa0517260:intron | 25.0% |
| !! | GATGAATTGATGATAATATG+AGG | - | chr3_4:68756389-68756408 | None:intergenic | 25.0% |
| ! | AATTAGATTAAGTGTAGTCT+TGG | - | chr3_4:68756418-68756437 | None:intergenic | 25.0% |
| ! | CTGTTAAGTAGAAATTATCA+AGG | - | chr3_4:68756698-68756717 | None:intergenic | 25.0% |
| !! | CTTGATAATTTCTACTTAAC+AGG | + | chr3_4:68756696-68756715 | Msa0517260:intron | 25.0% |
| !!! | TAACAGGTTGTGATTTTAAT+TGG | + | chr3_4:68756712-68756731 | Msa0517260:intron | 25.0% |
| !!! | AACAGGTTGTGATTTTAATT+GGG | + | chr3_4:68756713-68756732 | Msa0517260:intron | 25.0% |
| ! | CAATATATGTTTCCATACTT+TGG | + | chr3_4:68756849-68756868 | Msa0517260:intron | 25.0% |
| ! | ATTAAATGGGTATATGAAGA+TGG | + | chr3_4:68756967-68756986 | Msa0517260:CDS | 25.0% |
| ! | ATTAACGTTATGCAATTTCA+GGG | - | chr3_4:68759443-68759462 | None:intergenic | 25.0% |
| ! | CAGTTAACAGAAAAATTTGA+CGG | - | chr3_4:68757226-68757245 | None:intergenic | 25.0% |
| !!! | CTTTAATATCTTTTGAGTCA+AGG | - | chr3_4:68757333-68757352 | None:intergenic | 25.0% |
| ! | CTTGACTCAAAAGATATTAA+AGG | + | chr3_4:68757331-68757350 | Msa0517260:intron | 25.0% |
| ! | GTCATATAAATCTTTATGGA+AGG | + | chr3_4:68757416-68757435 | Msa0517260:intron | 25.0% |
| !!! | AGACTTTTTTTTACACAAGT+TGG | + | chr3_4:68757479-68757498 | Msa0517260:intron | 25.0% |
| ! | TGTCCATAAAGAAAATTCAT+AGG | + | chr3_4:68757554-68757573 | Msa0517260:intron | 25.0% |
| ! | GTTATCATCAAAACTCTTTA+AGG | - | chr3_4:68757669-68757688 | None:intergenic | 25.0% |
| !!! | AAAGAGTTTTGATGATAACA+AGG | + | chr3_4:68757670-68757689 | Msa0517260:intron | 25.0% |
| ! | TAATATTTGTTCAAGTGTAC+AGG | + | chr3_4:68757719-68757738 | Msa0517260:intron | 25.0% |
| !! | AACAACAAAAATTTGAAGCT+TGG | + | chr3_4:68757801-68757820 | Msa0517260:intron | 25.0% |
| !! | ATAAGGAATGGATTTCAAAT+TGG | + | chr3_4:68758300-68758319 | Msa0517260:intron | 25.0% |
| !! | ATTTCAAATTGGTTCTTCAT+AGG | + | chr3_4:68758311-68758330 | Msa0517260:intron | 25.0% |
| !!! | CTGTGTAATTTTGTTTAGTT+AGG | + | chr3_4:68758661-68758680 | Msa0517260:intron | 25.0% |
| ! | AATATATGCCAAAGAAATCA+TGG | - | chr3_4:68759220-68759239 | None:intergenic | 25.0% |
| !! | AGAACTGAATGTATGATTTT+TGG | + | chr3_4:68759296-68759315 | Msa0517260:intron | 25.0% |
| ! | TTAACAGAAAAATTTAACGG+AGG | + | chr3_4:68759410-68759429 | Msa0517260:intron | 25.0% |
| ! | TAACAGAAAAATTTAACGGA+GGG | + | chr3_4:68759411-68759430 | Msa0517260:intron | 25.0% |
| ! | ATTAACGTTATGCAATTTCA+GGG | + | chr3_4:68759443-68759462 | Msa0517260:intron | 25.0% |
| !!! | TGAAGTTTTGTTAATTTCAG+GGG | + | chr3_4:68759472-68759491 | Msa0517260:intron | 25.0% |
| ! | GAAGTTTGTATTAACCTTAA+AGG | - | chr3_4:68759717-68759736 | None:intergenic | 25.0% |
| ! | TAAAGATTTCTATCAATCCA+TGG | + | chr3_4:68759950-68759969 | Msa0517260:CDS | 25.0% |
| !! | ATAGGCCTTCTTAATTTTAA+TGG | + | chr3_4:68760202-68760221 | Msa0517260:intron | 25.0% |
| ! | TTGCTCCATTAAAATTAAGA+AGG | - | chr3_4:68760210-68760229 | None:intergenic | 25.0% |
| !!! | TCTTAATTTTAATGGAGCAA+TGG | + | chr3_4:68760210-68760229 | Msa0517260:intron | 25.0% |
| ! | ATGAAATGTTTAGAGATGAA+TGG | + | chr3_4:68760441-68760460 | Msa0517260:CDS | 25.0% |
| ! | TGAAATGTTTAGAGATGAAT+GGG | + | chr3_4:68760442-68760461 | Msa0517260:CDS | 25.0% |
| ! | ATGAATGGGATGATAATTAT+TGG | + | chr3_4:68760456-68760475 | Msa0517260:CDS | 25.0% |
| ! | TGAATGGGATGATAATTATT+GGG | + | chr3_4:68760457-68760476 | Msa0517260:CDS | 25.0% |
| CTAAAACAATCTTGTCTTGA+TGG | + | chr3_4:68755387-68755406 | Msa0517260:exon | 30.0% | |
| AATCTTCCAAGACATATCAT+GGG | + | chr3_4:68755616-68755635 | Msa0517260:CDS | 30.0% | |
| CAAAATGAATATGATGTACC+TGG | - | chr3_4:68755981-68756000 | None:intergenic | 30.0% | |
| CTTGATTGAATAGGCTAAAA+CGG | + | chr3_4:68756023-68756042 | Msa0517260:intron | 30.0% | |
| CGGAAAATATGTATGCAAAT+AGG | + | chr3_4:68756043-68756062 | Msa0517260:intron | 30.0% | |
| ATGTCATTATACAAACAGTG+GGG | - | chr3_4:68756354-68756373 | None:intergenic | 30.0% | |
| GATGTCATTATACAAACAGT+GGG | - | chr3_4:68756355-68756374 | None:intergenic | 30.0% | |
| TGATGTCATTATACAAACAG+TGG | - | chr3_4:68756356-68756375 | None:intergenic | 30.0% | |
| TCTTAAGTGTTACACTTTGT+GGG | - | chr3_4:68756469-68756488 | None:intergenic | 30.0% | |
| ACGAAACTTACAATTTCAGA+GGG | - | chr3_4:68757159-68757178 | None:intergenic | 30.0% | |
| TTAACGTTATGCAATTTCAG+GGG | - | chr3_4:68759444-68759463 | None:intergenic | 30.0% | |
| GATTAACGTTATGCAATTTC+AGG | - | chr3_4:68759442-68759461 | None:intergenic | 30.0% | |
| TAACAGAAAAATTTGACGGA+GGG | - | chr3_4:68757222-68757241 | None:intergenic | 30.0% | |
| TTAACAGAAAAATTTGACGG+AGG | - | chr3_4:68757223-68757242 | None:intergenic | 30.0% | |
| ATGTATGTTTATGCAGCTAT+TGG | + | chr3_4:68757394-68757413 | Msa0517260:intron | 30.0% | |
| CATAGGTTAATATCTACACA+AGG | + | chr3_4:68757571-68757590 | Msa0517260:intron | 30.0% | |
| AATGAGCAAATAAAGAGCAA+AGG | + | chr3_4:68757777-68757796 | Msa0517260:intron | 30.0% | |
| TCTTTCACACCTCTATATAA+AGG | + | chr3_4:68758420-68758439 | Msa0517260:intron | 30.0% | |
| AACACTTGATATACAATCAG+AGG | - | chr3_4:68758624-68758643 | None:intergenic | 30.0% | |
| TAATCAGAATCTAAATGCAG+CGG | - | chr3_4:68758929-68758948 | None:intergenic | 30.0% | |
| TGACAAAACCATGATTTCTT+TGG | + | chr3_4:68759209-68759228 | Msa0517260:intron | 30.0% | |
| CACATAAGTGCAAAATTTCA+GGG | + | chr3_4:68759361-68759380 | Msa0517260:intron | 30.0% | |
| ACATAAGTGCAAAATTTCAG+GGG | + | chr3_4:68759362-68759381 | Msa0517260:intron | 30.0% | |
| AACAGAAAAATTTAACGGAG+GGG | + | chr3_4:68759412-68759431 | Msa0517260:intron | 30.0% | |
| GATTAACGTTATGCAATTTC+AGG | + | chr3_4:68759442-68759461 | Msa0517260:intron | 30.0% | |
| TTAACGTTATGCAATTTCAG+GGG | + | chr3_4:68759444-68759463 | Msa0517260:intron | 30.0% | |
| !!! | GAAGTTTTGTTAATTTCAGG+GGG | + | chr3_4:68759473-68759492 | Msa0517260:intron | 30.0% |
| ! | AACGAAACTTACAATTTTGG+AGG | + | chr3_4:68759501-68759520 | Msa0517260:intron | 30.0% |
| ! | ACGAAACTTACAATTTTGGA+GGG | + | chr3_4:68759502-68759521 | Msa0517260:intron | 30.0% |
| ATTCCTTTCCTAGAAACAAA+TGG | + | chr3_4:68759599-68759618 | Msa0517260:intron | 30.0% | |
| ! | TTACTGTTCCATTTGTTTCT+AGG | - | chr3_4:68759610-68759629 | None:intergenic | 30.0% |
| !! | TTTCATTGGTTTGACCTTTA+AGG | + | chr3_4:68759700-68759719 | Msa0517260:intron | 30.0% |
| AATAAAAAATTGTCGTGGCT+AGG | + | chr3_4:68759827-68759846 | Msa0517260:intron | 30.0% | |
| TTTACCTAATGAAGAAGAGA+TGG | + | chr3_4:68759917-68759936 | Msa0517260:CDS | 30.0% | |
| TTTGACAATTGTAAAGGGTA+AGG | + | chr3_4:68760263-68760282 | Msa0517260:intron | 30.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | + | chr3_4:68755406-68755425 | Msa0517260:CDS | 35.0% | |
| TGATTTATGGGTGTATATCC+AGG | - | chr3_4:68755524-68755543 | None:intergenic | 35.0% | |
| AGGATCAGAGTCTGATTTAT+GGG | - | chr3_4:68755536-68755555 | None:intergenic | 35.0% | |
| CATGATATGTCTTGGAAGAT+TGG | - | chr3_4:68755617-68755636 | None:intergenic | 35.0% | |
| CAATCTTCCAAGACATATCA+TGG | + | chr3_4:68755615-68755634 | Msa0517260:CDS | 35.0% | |
| ATCTTCCAAGACATATCATG+GGG | + | chr3_4:68755617-68755636 | Msa0517260:CDS | 35.0% | |
| TTGTGAAAGTTGAGAGGAAA+GGG | + | chr3_4:68755776-68755795 | Msa0517260:CDS | 35.0% | |
| ! | GTTCCTGGTATTGAAAACTT+TGG | + | chr3_4:68755904-68755923 | Msa0517260:CDS | 35.0% |
| TGTCATTATACAAACAGTGG+GGG | - | chr3_4:68756353-68756372 | None:intergenic | 35.0% | |
| TGTTACGCTTAAAACAAGGT+AGG | - | chr3_4:68756445-68756464 | None:intergenic | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | chr3_4:68756468-68756487 | None:intergenic | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | chr3_4:68756470-68756489 | None:intergenic | 35.0% | |
| TAGTAATGCTTGCAACATCT+TGG | - | chr3_4:68756560-68756579 | None:intergenic | 35.0% | |
| AATTATCAAGGGAGCTTCTA+CGG | - | chr3_4:68756686-68756705 | None:intergenic | 35.0% | |
| !!! | GTTGTGATTTTAATTGGGCT+AGG | + | chr3_4:68756718-68756737 | Msa0517260:intron | 35.0% |
| AGATATTGCAAGACTAGCAA+AGG | + | chr3_4:68756765-68756784 | Msa0517260:intron | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | - | chr3_4:68757001-68757020 | None:intergenic | 35.0% | |
| ATGCCATAATTCACTGTACA+GGG | + | chr3_4:68757028-68757047 | Msa0517260:CDS | 35.0% | |
| TTACCCTGTACAGTGAATTA+TGG | - | chr3_4:68757034-68757053 | None:intergenic | 35.0% | |
| CGAAACTTACAATTTCAGAG+GGG | - | chr3_4:68757158-68757177 | None:intergenic | 35.0% | |
| GACGAAACTTACAATTTCAG+AGG | - | chr3_4:68757160-68757179 | None:intergenic | 35.0% | |
| TAACGTTATGCAATTTCAGG+GGG | - | chr3_4:68759445-68759464 | None:intergenic | 35.0% | |
| AACAGAAAAATTTGACGGAG+GGG | - | chr3_4:68757221-68757240 | None:intergenic | 35.0% | |
| ACATAAGTGCCAAATTTCAG+GGG | - | chr3_4:68757272-68757291 | None:intergenic | 35.0% | |
| CACATAAGTGCCAAATTTCA+GGG | - | chr3_4:68757273-68757292 | None:intergenic | 35.0% | |
| TACACAAGGAAGAAGAAACA+AGG | + | chr3_4:68757585-68757604 | Msa0517260:intron | 35.0% | |
| ! | GTTTGTGTTTTCGAATCCAA+TGG | - | chr3_4:68758083-68758102 | None:intergenic | 35.0% |
| GGATTCGAAAACACAAACAA+AGG | + | chr3_4:68758085-68758104 | Msa0517260:intron | 35.0% | |
| !! | GGATTAGTGAAGTTTTGCAA+CGG | + | chr3_4:68758106-68758125 | Msa0517260:intron | 35.0% |
| ! | TTTTGCAACGGTCATTTCAA+AGG | + | chr3_4:68758118-68758137 | Msa0517260:intron | 35.0% |
| AAGAAAACAGCTCCAGAATA+CGG | + | chr3_4:68758251-68758270 | Msa0517260:intron | 35.0% | |
| CATAGATGTTCCTTTGGATA+AGG | + | chr3_4:68758283-68758302 | Msa0517260:intron | 35.0% | |
| ATGTTCCTTTGGATAAGGAA+TGG | + | chr3_4:68758288-68758307 | Msa0517260:intron | 35.0% | |
| GAAATCCATTCCTTATCCAA+AGG | - | chr3_4:68758296-68758315 | None:intergenic | 35.0% | |
| ! | CAATGATCTTTTGCCTGATT+TGG | - | chr3_4:68758344-68758363 | None:intergenic | 35.0% |
| CAAATCAGGCAAAAGATCAT+TGG | + | chr3_4:68758342-68758361 | Msa0517260:intron | 35.0% | |
| GTCTTCACTCCTTTATATAG+AGG | - | chr3_4:68758432-68758451 | None:intergenic | 35.0% | |
| TCATGCATTACCAAATCTCT+AGG | - | chr3_4:68758454-68758473 | None:intergenic | 35.0% | |
| GAACAATTTCAGCAGAGATT+TGG | - | chr3_4:68758513-68758532 | None:intergenic | 35.0% | |
| CAAATCAGATACAGACTCAA+TGG | - | chr3_4:68758590-68758609 | None:intergenic | 35.0% | |
| TTGATTGTGTTCTTGAGCAA+AGG | + | chr3_4:68758719-68758738 | Msa0517260:intron | 35.0% | |
| TACTCATAGTGAAATCTCCT+TGG | + | chr3_4:68758813-68758832 | Msa0517260:intron | 35.0% | |
| ACGACACAAAGCAATTATAC+TGG | - | chr3_4:68758881-68758900 | None:intergenic | 35.0% | |
| ! | GATCAGTGTGTTCAGTTTTT+AGG | + | chr3_4:68758979-68758998 | Msa0517260:intron | 35.0% |
| TGAGAAAAAACACAAGAAGG+GGG | - | chr3_4:68759038-68759057 | None:intergenic | 35.0% | |
| GTGAGAAAAAACACAAGAAG+GGG | - | chr3_4:68759039-68759058 | None:intergenic | 35.0% | |
| GGTGAGAAAAAACACAAGAA+GGG | - | chr3_4:68759040-68759059 | None:intergenic | 35.0% | |
| AGGTGAGAAAAAACACAAGA+AGG | - | chr3_4:68759041-68759060 | None:intergenic | 35.0% | |
| GCACATAAGTGCAAAATTTC+AGG | + | chr3_4:68759360-68759379 | Msa0517260:intron | 35.0% | |
| CATAAGTGCAAAATTTCAGG+GGG | + | chr3_4:68759363-68759382 | Msa0517260:intron | 35.0% | |
| ATAAGTGCAAAATTTCAGGG+GGG | + | chr3_4:68759364-68759383 | Msa0517260:intron | 35.0% | |
| ACAGAAAAATTTAACGGAGG+GGG | + | chr3_4:68759413-68759432 | Msa0517260:intron | 35.0% | |
| TAACGTTATGCAATTTCAGG+GGG | + | chr3_4:68759445-68759464 | Msa0517260:intron | 35.0% | |
| !! | TTGTTTCTAGGAAAGGAATG+TGG | - | chr3_4:68759598-68759617 | None:intergenic | 35.0% |
| !! | GTTCCATTTGTTTCTAGGAA+AGG | - | chr3_4:68759605-68759624 | None:intergenic | 35.0% |
| ACCATTGAAGATAATCGTGT+TGG | + | chr3_4:68759629-68759648 | Msa0517260:intron | 35.0% | |
| CCATTGAAGATAATCGTGTT+GGG | + | chr3_4:68759630-68759649 | Msa0517260:intron | 35.0% | |
| GGAAAAACGTGTTTGTATAG+TGG | - | chr3_4:68759656-68759675 | None:intergenic | 35.0% | |
| AGATTTCTATCAATCCATGG+AGG | + | chr3_4:68759953-68759972 | Msa0517260:CDS | 35.0% | |
| TATCAATCCATGGAGGAAAA+TGG | + | chr3_4:68759960-68759979 | Msa0517260:CDS | 35.0% | |
| ATCAATCCATGGAGGAAAAT+GGG | + | chr3_4:68759961-68759980 | Msa0517260:CDS | 35.0% | |
| ATAAGCGTACACACTTGTAA+TGG | - | chr3_4:68760017-68760036 | None:intergenic | 35.0% | |
| ACAATTGTAAAGGGTAAGGT+AGG | + | chr3_4:68760267-68760286 | Msa0517260:intron | 35.0% | |
| TGTCATACTCATGGTTAGGT+GGG | - | chr3_4:68755283-68755302 | None:intergenic | 40.0% | |
| TTGTCATACTCATGGTTAGG+TGG | - | chr3_4:68755284-68755303 | None:intergenic | 40.0% | |
| AGCTTGTCATACTCATGGTT+AGG | - | chr3_4:68755287-68755306 | None:intergenic | 40.0% | |
| TAACCATGAGTATGACAAGC+TGG | + | chr3_4:68755286-68755305 | Msa0517260:five_prime_UTR | 40.0% | |
| GAGGATCAGAGTCTGATTTA+TGG | - | chr3_4:68755537-68755556 | None:intergenic | 40.0% | |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | - | chr3_4:68755570-68755589 | None:intergenic | 40.0% |
| AAGAACCCCATGATATGTCT+TGG | - | chr3_4:68755625-68755644 | None:intergenic | 40.0% | |
| !!! | TGAAGAAGTGCTTCGTTTTC+TGG | + | chr3_4:68755699-68755718 | Msa0517260:CDS | 40.0% |
| ! | CAGGTGAGTTTGGAATTCAT+GGG | + | chr3_4:68755731-68755750 | Msa0517260:CDS | 40.0% |
| TCACAACCTCCGTTTCAAAT+CGG | - | chr3_4:68755762-68755781 | None:intergenic | 40.0% | |
| GTTGTGAAAGTTGAGAGGAA+AGG | + | chr3_4:68755775-68755794 | Msa0517260:CDS | 40.0% | |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | + | chr3_4:68755837-68755856 | Msa0517260:CDS | 40.0% |
| TCTCGGTTCTACAAAATGAC+CGG | - | chr3_4:68755875-68755894 | None:intergenic | 40.0% | |
| ! | CCACCAAAGTTTTCAATACC+AGG | - | chr3_4:68755910-68755929 | None:intergenic | 40.0% |
| ! | CCTGGTATTGAAAACTTTGG+TGG | + | chr3_4:68755907-68755926 | Msa0517260:CDS | 40.0% |
| TCCTCATTCTTTCAAAGACC+AGG | + | chr3_4:68755960-68755979 | Msa0517260:CDS | 40.0% | |
| ! | ACCTGGTCTTTGAAAGAATG+AGG | - | chr3_4:68755964-68755983 | None:intergenic | 40.0% |
| AAGACCGAAACCAGATTTGA+AGG | + | chr3_4:68756804-68756823 | Msa0517260:intron | 40.0% | |
| AGACCGAAACCAGATTTGAA+GGG | + | chr3_4:68756805-68756824 | Msa0517260:intron | 40.0% | |
| ! | CTACCCTTCAAATCTGGTTT+CGG | - | chr3_4:68756811-68756830 | None:intergenic | 40.0% |
| AACTTCCTACCCTTCAAATC+TGG | - | chr3_4:68756817-68756836 | None:intergenic | 40.0% | |
| ATGGGTATATGAAGATGGCT+TGG | + | chr3_4:68756972-68756991 | Msa0517260:CDS | 40.0% | |
| GATGCCATAATTCACTGTAC+AGG | + | chr3_4:68757027-68757046 | Msa0517260:CDS | 40.0% | |
| ATAAGTGCCAAATTTCAGGG+GGG | - | chr3_4:68757270-68757289 | None:intergenic | 40.0% | |
| CATAAGTGCCAAATTTCAGG+GGG | - | chr3_4:68757271-68757290 | None:intergenic | 40.0% | |
| GCACATAAGTGCCAAATTTC+AGG | - | chr3_4:68757274-68757293 | None:intergenic | 40.0% | |
| AGGAAGAAGAAACAAGGCTT+AGG | + | chr3_4:68757591-68757610 | Msa0517260:intron | 40.0% | |
| TTCAGTAACAAGTTGCCTTC+AGG | - | chr3_4:68757832-68757851 | None:intergenic | 40.0% | |
| TTCAGAAGCGACTTAACTTC+AGG | - | chr3_4:68757868-68757887 | None:intergenic | 40.0% | |
| !! | GTTAAGTCGCTTCTGAAGTA+AGG | + | chr3_4:68757871-68757890 | Msa0517260:intron | 40.0% |
| !! | CTTCAGAAGCACTATTCTTC+AGG | - | chr3_4:68757922-68757941 | None:intergenic | 40.0% |
| ! | ATAGTGCTTCTGAAGACAAG+AGG | + | chr3_4:68757927-68757946 | Msa0517260:intron | 40.0% |
| TGGTGAAATAGCTTCTGATG+AGG | - | chr3_4:68757994-68758013 | None:intergenic | 40.0% | |
| TCAATGCAAAAGCTGTCCAT+TGG | + | chr3_4:68758064-68758083 | Msa0517260:intron | 40.0% | |
| !! | GTCATTTCAAAGGCGTTTGA+AGG | + | chr3_4:68758128-68758147 | Msa0517260:intron | 40.0% |
| ! | GAAGGCATGTGCTTACAATT+TGG | + | chr3_4:68758146-68758165 | Msa0517260:intron | 40.0% |
| ! | ACAAAACAGAGTAGTGGAGA+AGG | - | chr3_4:68758215-68758234 | None:intergenic | 40.0% |
| ! | TGTTTTCTTGTCTTGTAGCG+TGG | - | chr3_4:68758240-68758259 | None:intergenic | 40.0% |
| ATCCAAAGGAACATCTATGC+AGG | - | chr3_4:68758282-68758301 | None:intergenic | 40.0% | |
| CATAGGACAACAACCAAATC+AGG | + | chr3_4:68758328-68758347 | Msa0517260:intron | 40.0% | |
| AAGCTTCAACAACGACTCTT+TGG | + | chr3_4:68758374-68758393 | Msa0517260:intron | 40.0% | |
| ! | AAATCTCCTTGGAAGTGCAA+GGG | + | chr3_4:68758824-68758843 | Msa0517260:intron | 40.0% |
| GAGAAAAAACACAAGAAGGG+GGG | - | chr3_4:68759037-68759056 | None:intergenic | 40.0% | |
| CCCAACACGATTATCTTCAA+TGG | - | chr3_4:68759633-68759652 | None:intergenic | 40.0% | |
| AAACCAATGAAAGAGAGCCA+TGG | - | chr3_4:68759692-68759711 | None:intergenic | 40.0% | |
| TGATTGAGTTACAAGCCAAG+TGG | + | chr3_4:68759865-68759884 | Msa0517260:CDS | 40.0% | |
| TAAAACCCTAGCAATCCACT+TGG | - | chr3_4:68759883-68759902 | None:intergenic | 40.0% | |
| !! | TGGATTGCTAGGGTTTTATC+TGG | + | chr3_4:68759885-68759904 | Msa0517260:CDS | 40.0% |
| !! | TGCTAGGGTTTTATCTGGTA+AGG | + | chr3_4:68759890-68759909 | Msa0517260:CDS | 40.0% |
| ACCTAATGAAGAAGAGATGG+TGG | + | chr3_4:68759920-68759939 | Msa0517260:CDS | 40.0% | |
| TCCACCATCTCTTCTTCATT+AGG | - | chr3_4:68759924-68759943 | None:intergenic | 40.0% | |
| AAGTGAATGAGTTTGACGCT+TGG | - | chr3_4:68759991-68760010 | None:intergenic | 40.0% | |
| ! | TGACTACAAACATTGGCTAG+TGG | + | chr3_4:68760340-68760359 | Msa0517260:CDS | 40.0% |
| ATTGGCTAGTGGAACAGATT+GGG | + | chr3_4:68760351-68760370 | Msa0517260:CDS | 40.0% | |
| TTGGAGGGACAATATGTTGA+TGG | + | chr3_4:68760391-68760410 | Msa0517260:CDS | 40.0% | |
| GATCCAGCTTGTCATACTCA+TGG | - | chr3_4:68755292-68755311 | None:intergenic | 45.0% | |
| TCTCAAAAACGACGACGTTG+TGG | - | chr3_4:68755480-68755499 | None:intergenic | 45.0% | |
| TTTGAGAAGAACAACCGCGT+CGG | + | chr3_4:68755493-68755512 | Msa0517260:CDS | 45.0% | |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | - | chr3_4:68755571-68755590 | None:intergenic | 45.0% |
| !!! | AGAAGTGCTTCGTTTTCTGG+AGG | + | chr3_4:68755702-68755721 | Msa0517260:CDS | 45.0% |
| !! | CGTTTTCTGGAGGATTTTGC+AGG | + | chr3_4:68755712-68755731 | Msa0517260:CDS | 45.0% |
| ! | GAGGATTTTGCAGGTGAGTT+TGG | + | chr3_4:68755721-68755740 | Msa0517260:CDS | 45.0% |
| ! | GCAGGTGAGTTTGGAATTCA+TGG | + | chr3_4:68755730-68755749 | Msa0517260:CDS | 45.0% |
| ! | TGGGTTGACCCGATTTGAAA+CGG | + | chr3_4:68755750-68755769 | Msa0517260:CDS | 45.0% |
| CACAACCTCCGTTTCAAATC+GGG | - | chr3_4:68755761-68755780 | None:intergenic | 45.0% | |
| GAAAGTTGAGAGGAAAGGGA+AGG | + | chr3_4:68755780-68755799 | Msa0517260:CDS | 45.0% | |
| GAAGCGGTTGTTGTATGTTC+CGG | + | chr3_4:68755853-68755872 | Msa0517260:CDS | 45.0% | |
| ! | GGGGTGTTACGCTTAAAACA+AGG | - | chr3_4:68756449-68756468 | None:intergenic | 45.0% |
| ! | CAAATCTGGTTTCGGTCTTG+TGG | - | chr3_4:68756803-68756822 | None:intergenic | 45.0% |
| CGAAACCAGATTTGAAGGGT+AGG | + | chr3_4:68756809-68756828 | Msa0517260:intron | 45.0% | |
| CAAATACCCCCCCTGAAATT+TGG | + | chr3_4:68757260-68757279 | Msa0517260:intron | 45.0% | |
| TAAGTGCCAAATTTCAGGGG+GGG | - | chr3_4:68757269-68757288 | None:intergenic | 45.0% | |
| TTCAGGAGCAGCTTTACTTC+AGG | - | chr3_4:68757905-68757924 | None:intergenic | 45.0% | |
| ! | TGATGCAGCTTCTGATGATG+TGG | - | chr3_4:68757961-68757980 | None:intergenic | 45.0% |
| ACCAGAAGCTGAATCTCAAC+TGG | + | chr3_4:68758010-68758029 | Msa0517260:intron | 45.0% | |
| TCCAGTTGAGATTCAGCTTC+TGG | - | chr3_4:68758014-68758033 | None:intergenic | 45.0% | |
| ! | AAACAGAGTAGTGGAGAAGG+TGG | - | chr3_4:68758212-68758231 | None:intergenic | 45.0% |
| GTGGACACAAAACAGAGTAG+TGG | - | chr3_4:68758221-68758240 | None:intergenic | 45.0% | |
| GGAGTGAAGACCTAGAGATT+TGG | + | chr3_4:68758441-68758460 | Msa0517260:intron | 45.0% | |
| TTGCTTGTGTGCTTGAGCAT+TGG | + | chr3_4:68758749-68758768 | Msa0517260:intron | 45.0% | |
| ! | GAAATCTCCTTGGAAGTGCA+AGG | + | chr3_4:68758823-68758842 | Msa0517260:intron | 45.0% |
| ! | AATCTCCTTGGAAGTGCAAG+GGG | + | chr3_4:68758825-68758844 | Msa0517260:intron | 45.0% |
| !! | TACTGGTTCCTTCCACAATC+CGG | - | chr3_4:68758864-68758883 | None:intergenic | 45.0% |
| ! | ACACGTTTTTCCTCCTTCAC+TGG | + | chr3_4:68759664-68759683 | Msa0517260:intron | 45.0% |
| !! | TACAAGCCAAGTGGATTGCT+AGG | + | chr3_4:68759874-68759893 | Msa0517260:CDS | 45.0% |
| !! | ACAAGCCAAGTGGATTGCTA+GGG | + | chr3_4:68759875-68759894 | Msa0517260:CDS | 45.0% |
| ! | GGATAACCCATTTTCCTCCA+TGG | - | chr3_4:68759970-68759989 | None:intergenic | 45.0% |
| GTCAGGGTGACTACAAACAT+TGG | + | chr3_4:68760333-68760352 | Msa0517260:intron | 45.0% | |
| ! | CATTGGCTAGTGGAACAGAT+TGG | + | chr3_4:68760350-68760369 | Msa0517260:CDS | 45.0% |
| TTGTCCCTCCAATCTTCCAA+TGG | - | chr3_4:68760383-68760402 | None:intergenic | 45.0% | |
| TGGGATGCTATCATACAGAG+TGG | + | chr3_4:68760476-68760495 | Msa0517260:CDS | 45.0% | |
| !!! | ATTTATTTTTTTAGATTAAA+TGG | + | chr3_4:68756953-68756972 | Msa0517260:intron | 5.0% |
| !!! | TTTATTTTTTTAGATTAAAT+GGG | + | chr3_4:68756954-68756973 | Msa0517260:intron | 5.0% |
| !!! | AAATATAAATTTTTAAGTTT+AGG | + | chr3_4:68759328-68759347 | Msa0517260:intron | 5.0% |
| !! | TTTAAATTAAAAAAATCAAT+AGG | + | chr3_4:68760184-68760203 | Msa0517260:intron | 5.0% |
| CTGGTTGGGTCTATGCTTAG+AGG | - | chr3_4:68755556-68755575 | None:intergenic | 50.0% | |
| ! | GCTGCTGTGAACTGTTTCTC+TGG | - | chr3_4:68755575-68755594 | None:intergenic | 50.0% |
| CGGATTCTCGCTTGGACAAA+GGG | - | chr3_4:68755654-68755673 | None:intergenic | 50.0% | |
| CCTTTGTCCAAGCGAGAATC+CGG | + | chr3_4:68755652-68755671 | Msa0517260:CDS | 50.0% | |
| CGGAAACGTTCTTGGATCAC+CGG | - | chr3_4:68755674-68755693 | None:intergenic | 50.0% | |
| CGGTGATCCAAGAACGTTTC+CGG | + | chr3_4:68755672-68755691 | Msa0517260:CDS | 50.0% | |
| GGTGATCCAAGAACGTTTCC+GGG | + | chr3_4:68755673-68755692 | Msa0517260:CDS | 50.0% | |
| TCATGACCCGGAAACGTTCT+TGG | - | chr3_4:68755682-68755701 | None:intergenic | 50.0% | |
| ! | CGAAGCACTTCTTCATGACC+CGG | - | chr3_4:68755694-68755713 | None:intergenic | 50.0% |
| ! | GTTGACCCGATTTGAAACGG+AGG | + | chr3_4:68755753-68755772 | Msa0517260:CDS | 50.0% |
| CGGAGGTTGTGAAAGTTGAG+AGG | + | chr3_4:68755770-68755789 | Msa0517260:CDS | 50.0% | |
| TTGAGAGGAAAGGGAAGGAC+TGG | + | chr3_4:68755785-68755804 | Msa0517260:CDS | 50.0% | |
| TGAGAGGAAAGGGAAGGACT+GGG | + | chr3_4:68755786-68755805 | Msa0517260:CDS | 50.0% | |
| !! | TGTAGAACCGAGACTTGCTG+TGG | + | chr3_4:68755882-68755901 | Msa0517260:CDS | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | + | chr3_4:68756988-68757007 | Msa0517260:CDS | 50.0% |
| ! | GCTTCTGATGATGTGGCTTC+TGG | - | chr3_4:68757954-68757973 | None:intergenic | 50.0% |
| CGCCTGCATAGATGTTCCTT+TGG | + | chr3_4:68758277-68758296 | Msa0517260:intron | 50.0% | |
| ! | ACAACGACTCTTTGGTGTGC+TGG | + | chr3_4:68758382-68758401 | Msa0517260:intron | 50.0% |
| TCTTGCAGTTGTGCTTGAGC+AGG | + | chr3_4:68758689-68758708 | Msa0517260:intron | 50.0% | |
| ! | ATCTCCTTGGAAGTGCAAGG+GGG | + | chr3_4:68758826-68758845 | Msa0517260:intron | 50.0% |
| ACTGGACTACTTCCGGATTG+TGG | + | chr3_4:68758849-68758868 | Msa0517260:intron | 50.0% | |
| GACTACTTCCGGATTGTGGA+AGG | + | chr3_4:68758853-68758872 | Msa0517260:intron | 50.0% | |
| GCACCATGGCTCTCTTTCAT+TGG | + | chr3_4:68759686-68759705 | Msa0517260:intron | 50.0% | |
| TGCCTCCATTGGAAGATTGG+AGG | + | chr3_4:68760375-68760394 | Msa0517260:CDS | 50.0% | |
| GCCTCCATTGGAAGATTGGA+GGG | + | chr3_4:68760376-68760395 | Msa0517260:CDS | 50.0% | |
| TCCCTCCAATCTTCCAATGG+AGG | - | chr3_4:68760380-68760399 | None:intergenic | 50.0% | |
| AAAGTTGCAGTGATCGGCGC+CGG | + | chr3_4:68755412-68755431 | Msa0517260:CDS | 55.0% | |
| TTCCTGCTGTAGCTCCTTGG+CGG | - | chr3_4:68755455-68755474 | None:intergenic | 55.0% | |
| ATATCCAGGTTCCTCCGACG+CGG | - | chr3_4:68755510-68755529 | None:intergenic | 55.0% | |
| CCGGATTCTCGCTTGGACAA+AGG | - | chr3_4:68755655-68755674 | None:intergenic | 55.0% | |
| TGGATCACCGGATTCTCGCT+TGG | - | chr3_4:68755662-68755681 | None:intergenic | 55.0% | |
| AGGACTGGGTGGTTGAGTCT+AGG | + | chr3_4:68755800-68755819 | Msa0517260:CDS | 55.0% | |
| GGACTGGGTGGTTGAGTCTA+GGG | + | chr3_4:68755801-68755820 | Msa0517260:CDS | 55.0% | |
| GACTGGGTGGTTGAGTCTAG+GGG | + | chr3_4:68755802-68755821 | Msa0517260:CDS | 55.0% | |
| CCAGGAACCACAGCAAGTCT+CGG | - | chr3_4:68755892-68755911 | None:intergenic | 55.0% | |
| GGAGCTTCTACGGTGCAGTT+AGG | - | chr3_4:68756676-68756695 | None:intergenic | 55.0% | |
| TGAAGCTTGGACGCTCCTGA+AGG | + | chr3_4:68757814-68757833 | Msa0517260:intron | 55.0% | |
| ATGCAGGCGAAGCCGTATTC+TGG | - | chr3_4:68758266-68758285 | None:intergenic | 55.0% | |
| AAGGGGGACTGGACTACTTC+CGG | + | chr3_4:68758842-68758861 | Msa0517260:intron | 55.0% | |
| TTCCTCCTTCACTGGCACCA+TGG | + | chr3_4:68759672-68759691 | Msa0517260:intron | 55.0% | |
| ACAGATTGGGCTGCCTCCAT+TGG | + | chr3_4:68760364-68760383 | Msa0517260:CDS | 55.0% | |
| GGCTGCCTCCATTGGAAGAT+TGG | + | chr3_4:68760372-68760391 | Msa0517260:CDS | 55.0% | |
| GGCAACCATACCGGAGACTC+CGG | - | chr3_4:68755434-68755453 | None:intergenic | 60.0% | |
| CTCCTTGGCGGCAACCATAC+CGG | - | chr3_4:68755443-68755462 | None:intergenic | 60.0% | |
| GCCAAGGAGCTACAGCAGGA+AGG | + | chr3_4:68755454-68755473 | Msa0517260:CDS | 60.0% | |
| GCCTTCCTGCTGTAGCTCCT+TGG | - | chr3_4:68755458-68755477 | None:intergenic | 60.0% | |
| GAGAAGAACAACCGCGTCGG+AGG | + | chr3_4:68755496-68755515 | Msa0517260:CDS | 60.0% | |
| GAGGAAAGGGAAGGACTGGG+TGG | + | chr3_4:68755789-68755808 | Msa0517260:CDS | 60.0% | |
| TGGGTGGTTGAGTCTAGGGG+AGG | + | chr3_4:68755805-68755824 | Msa0517260:CDS | 60.0% | |
| !! | CCGAGACTTGCTGTGGTTCC+TGG | + | chr3_4:68755889-68755908 | Msa0517260:CDS | 60.0% |
| CAGTCCCCCTTGCACTTCCA+AGG | - | chr3_4:68758833-68758852 | None:intergenic | 60.0% | |
| ! | CTTGGAAGTGCAAGGGGGAC+TGG | + | chr3_4:68758831-68758850 | Msa0517260:intron | 60.0% |
| ! | AGCCATGGTGCCAGTGAAGG+AGG | - | chr3_4:68759677-68759696 | None:intergenic | 60.0% |
| ! | GAGAGCCATGGTGCCAGTGA+AGG | - | chr3_4:68759680-68759699 | None:intergenic | 60.0% |
| CTCCGGTATGGTTGCCGCCA+AGG | + | chr3_4:68755438-68755457 | Msa0517260:CDS | 65.0% | |
| TGCCGCCAAGGAGCTACAGC+AGG | + | chr3_4:68755450-68755469 | Msa0517260:CDS | 65.0% | |
| ACAACCGCGTCGGAGGAACC+TGG | + | chr3_4:68755503-68755522 | Msa0517260:CDS | 65.0% | |
| ! | GTGATCGGCGCCGGAGTCTC+CGG | + | chr3_4:68755421-68755440 | Msa0517260:CDS | 70.0% |
| ! | CGGCGCCGGAGTCTCCGGTA+TGG | + | chr3_4:68755426-68755445 | Msa0517260:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 68755277 | 68760511 | 68755277 | ID=Msa0517260;Name=Msa0517260 |
| chr3_4 | mRNA | 68755277 | 68760511 | 68755277 | ID=Msa0517260-mRNA-1;Parent=Msa0517260;Name=Msa0517260-mRNA-1;_AED=0.15;_eAED=0.15;_QI=129|0|0.25|1|1|1|4|0|330 |
| chr3_4 | exon | 68755277 | 68755981 | 68755277 | ID=Msa0517260-mRNA-1:exon:18213;Parent=Msa0517260-mRNA-1 |
| chr3_4 | exon | 68756967 | 68757049 | 68756967 | ID=Msa0517260-mRNA-1:exon:18214;Parent=Msa0517260-mRNA-1 |
| chr3_4 | exon | 68759863 | 68760022 | 68759863 | ID=Msa0517260-mRNA-1:exon:18215;Parent=Msa0517260-mRNA-1 |
| chr3_4 | exon | 68760338 | 68760511 | 68760338 | ID=Msa0517260-mRNA-1:exon:18216;Parent=Msa0517260-mRNA-1 |
| chr3_4 | five_prime_UTR | 68755277 | 68755405 | 68755277 | ID=Msa0517260-mRNA-1:five_prime_utr;Parent=Msa0517260-mRNA-1 |
| chr3_4 | CDS | 68755406 | 68755981 | 68755406 | ID=Msa0517260-mRNA-1:cds;Parent=Msa0517260-mRNA-1 |
| chr3_4 | CDS | 68756967 | 68757049 | 68756967 | ID=Msa0517260-mRNA-1:cds;Parent=Msa0517260-mRNA-1 |
| chr3_4 | CDS | 68759863 | 68760022 | 68759863 | ID=Msa0517260-mRNA-1:cds;Parent=Msa0517260-mRNA-1 |
| chr3_4 | CDS | 68760338 | 68760511 | 68760338 | ID=Msa0517260-mRNA-1:cds;Parent=Msa0517260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
