AlfalfaGEDB | MS.gene22667

M. sativa cultivar XinJiangDaYe / MS.gene22667

KEGG: K01807
GO: GO:0003674 GO:0003824 GO:0004751 GO:0006091 GO:0008150 GO:0008152 GO:0009052 GO:0009987 GO:0016853 GO:0016860 GO:0016861 GO:0044237 GO:0071704 GO:1901135
PFAM: PF06026.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22667.t1	AFK42539.1	100	203	0	0	12	214	74	276	1.10E-106	396

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22667.t1	Q9S726	78.3	203	44	0	12	214	70	272	5.0e-87	322.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22667.t1	G7L1U4	100.0	203	0	0	12	214	74	276	8.2e-107	396.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene22667	0.806888	6.61E-50	-1.69E-46
MS.gene049171	MS.gene22667	0.906101	2.12E-80	-1.69E-46
MS.gene049173	MS.gene22667	0.852273	5.14E-61	-1.69E-46
MS.gene049181	MS.gene22667	-0.802498	5.45E-49	-1.69E-46
MS.gene049217	MS.gene22667	0.8904	1.02E-73	-1.69E-46
MS.gene049222	MS.gene22667	0.928351	3.27E-92	-1.69E-46
MS.gene049232	MS.gene22667	0.898136	7.13E-77	-1.69E-46
MS.gene049285	MS.gene22667	0.938905	3.10E-99	-1.69E-46
MS.gene049320	MS.gene22667	0.947012	1.53E-105	-1.69E-46
MS.gene04939	MS.gene22667	0.859319	4.49E-63	-1.69E-46
MS.gene049427	MS.gene22667	0.814262	1.69E-51	-1.69E-46
MS.gene049609	MS.gene22667	0.880716	4.36E-70	-1.69E-46
MS.gene049627	MS.gene22667	0.859887	3.03E-63	-1.69E-46
MS.gene049633	MS.gene22667	0.900376	7.80E-78	-1.69E-46
MS.gene049805	MS.gene22667	0.853283	2.65E-61	-1.69E-46
MS.gene049865	MS.gene22667	0.827136	1.85E-54	-1.69E-46
MS.gene05010	MS.gene22667	0.904101	1.74E-79	-1.69E-46
MS.gene050163	MS.gene22667	0.937722	2.18E-98	-1.69E-46
MS.gene050165	MS.gene22667	0.935401	8.99E-97	-1.69E-46
MS.gene050170	MS.gene22667	0.864122	1.53E-64	-1.69E-46
MS.gene050216	MS.gene22667	0.840383	8.99E-58	-1.69E-46
MS.gene050323	MS.gene22667	0.887338	1.56E-72	-1.69E-46
MS.gene050333	MS.gene22667	0.899451	1.96E-77	-1.69E-46
MS.gene050381	MS.gene22667	-0.812069	5.10E-51	-1.69E-46
MS.gene050444	MS.gene22667	0.831258	1.85E-55	-1.69E-46
MS.gene050496	MS.gene22667	0.876174	1.72E-68	-1.69E-46
MS.gene050504	MS.gene22667	0.936234	2.40E-97	-1.69E-46
MS.gene050518	MS.gene22667	0.971548	2.45E-133	-1.69E-46
MS.gene050538	MS.gene22667	0.835013	2.15E-56	-1.69E-46
MS.gene050577	MS.gene22667	0.908619	1.40E-81	-1.69E-46
MS.gene050593	MS.gene22667	0.827113	1.87E-54	-1.69E-46
MS.gene050612	MS.gene22667	0.948433	9.53E-107	-1.69E-46
MS.gene050647	MS.gene22667	-0.800895	1.16E-48	-1.69E-46
MS.gene050662	MS.gene22667	0.85022	1.95E-60	-1.69E-46
MS.gene050675	MS.gene22667	0.923573	2.22E-89	-1.69E-46
MS.gene050686	MS.gene22667	0.808797	2.60E-50	-1.69E-46
MS.gene050690	MS.gene22667	0.84324	1.58E-58	-1.69E-46
MS.gene050699	MS.gene22667	0.934847	2.14E-96	-1.69E-46
MS.gene050747	MS.gene22667	0.87794	4.20E-69	-1.69E-46
MS.gene050772	MS.gene22667	0.911151	8.41E-83	-1.69E-46
MS.gene05080	MS.gene22667	0.89546	9.39E-76	-1.69E-46
MS.gene050868	MS.gene22667	0.884165	2.42E-71	-1.69E-46
MS.gene050871	MS.gene22667	0.882486	1.00E-70	-1.69E-46
MS.gene050876	MS.gene22667	0.893683	5.00E-75	-1.69E-46
MS.gene05087	MS.gene22667	0.833726	4.52E-56	-1.69E-46
MS.gene050883	MS.gene22667	-0.802588	5.22E-49	-1.69E-46
MS.gene050904	MS.gene22667	0.882496	9.92E-71	-1.69E-46
MS.gene050950	MS.gene22667	0.883355	4.81E-71	-1.69E-46
MS.gene050986	MS.gene22667	0.935526	7.38E-97	-1.69E-46
MS.gene05100	MS.gene22667	0.892242	1.90E-74	-1.69E-46
MS.gene051127	MS.gene22667	-0.810794	9.65E-51	-1.69E-46
MS.gene051138	MS.gene22667	-0.803934	2.75E-49	-1.69E-46
MS.gene051228	MS.gene22667	0.829612	4.67E-55	-1.69E-46
MS.gene051268	MS.gene22667	0.847099	1.43E-59	-1.69E-46
MS.gene051317	MS.gene22667	0.90409	1.76E-79	-1.69E-46
MS.gene051364	MS.gene22667	-0.823678	1.22E-53	-1.69E-46
MS.gene051366	MS.gene22667	-0.820732	5.87E-53	-1.69E-46
MS.gene051387	MS.gene22667	0.80157	8.46E-49	-1.69E-46
MS.gene051509	MS.gene22667	0.821577	3.75E-53	-1.69E-46
MS.gene051551	MS.gene22667	0.895119	1.30E-75	-1.69E-46
MS.gene051666	MS.gene22667	0.840657	7.62E-58	-1.69E-46
MS.gene051694	MS.gene22667	0.835079	2.07E-56	-1.69E-46
MS.gene051734	MS.gene22667	0.804573	2.02E-49	-1.69E-46
MS.gene051810	MS.gene22667	0.910008	3.03E-82	-1.69E-46
MS.gene051838	MS.gene22667	0.818223	2.19E-52	-1.69E-46
MS.gene051858	MS.gene22667	0.854011	1.63E-61	-1.69E-46
MS.gene051874	MS.gene22667	0.801291	9.65E-49	-1.69E-46
MS.gene051949	MS.gene22667	0.863252	2.84E-64	-1.69E-46
MS.gene052164	MS.gene22667	0.880755	4.23E-70	-1.69E-46
MS.gene052271	MS.gene22667	0.859738	3.36E-63	-1.69E-46
MS.gene052379	MS.gene22667	0.839904	1.20E-57	-1.69E-46
MS.gene052482	MS.gene22667	0.889921	1.57E-73	-1.69E-46
MS.gene052486	MS.gene22667	0.894956	1.51E-75	-1.69E-46
MS.gene052503	MS.gene22667	0.852658	4.00E-61	-1.69E-46
MS.gene052504	MS.gene22667	0.815598	8.51E-52	-1.69E-46
MS.gene052506	MS.gene22667	0.848352	6.48E-60	-1.69E-46
MS.gene052615	MS.gene22667	0.884995	1.19E-71	-1.69E-46
MS.gene052670	MS.gene22667	0.830812	2.38E-55	-1.69E-46
MS.gene052822	MS.gene22667	0.862661	4.33E-64	-1.69E-46
MS.gene052823	MS.gene22667	0.851034	1.15E-60	-1.69E-46
MS.gene052825	MS.gene22667	0.846491	2.10E-59	-1.69E-46
MS.gene052870	MS.gene22667	0.807606	4.66E-50	-1.69E-46
MS.gene052872	MS.gene22667	0.821442	4.03E-53	-1.69E-46
MS.gene052916	MS.gene22667	0.868268	7.41E-66	-1.69E-46
MS.gene052966	MS.gene22667	0.884208	2.33E-71	-1.69E-46
MS.gene053009	MS.gene22667	0.842776	2.10E-58	-1.69E-46
MS.gene053104	MS.gene22667	0.81599	6.96E-52	-1.69E-46
MS.gene053117	MS.gene22667	0.807334	5.32E-50	-1.69E-46
MS.gene053203	MS.gene22667	0.892315	1.78E-74	-1.69E-46
MS.gene053207	MS.gene22667	0.874386	7.04E-68	-1.69E-46
MS.gene053213	MS.gene22667	0.924277	8.73E-90	-1.69E-46
MS.gene053286	MS.gene22667	0.92619	6.59E-91	-1.69E-46
MS.gene053322	MS.gene22667	0.819247	1.28E-52	-1.69E-46
MS.gene053420	MS.gene22667	-0.813612	2.34E-51	-1.69E-46
MS.gene053436	MS.gene22667	0.852987	3.22E-61	-1.69E-46
MS.gene053479	MS.gene22667	0.830055	3.64E-55	-1.69E-46
MS.gene053480	MS.gene22667	0.836265	1.04E-56	-1.69E-46
MS.gene053561	MS.gene22667	-0.806986	6.30E-50	-1.69E-46
MS.gene053574	MS.gene22667	0.897533	1.28E-76	-1.69E-46
MS.gene053579	MS.gene22667	0.80243	5.63E-49	-1.69E-46
MS.gene053626	MS.gene22667	0.876052	1.90E-68	-1.69E-46
MS.gene053632	MS.gene22667	0.879035	1.73E-69	-1.69E-46
MS.gene053633	MS.gene22667	0.848067	7.76E-60	-1.69E-46
MS.gene053824	MS.gene22667	0.859023	5.51E-63	-1.69E-46
MS.gene053916	MS.gene22667	0.853472	2.34E-61	-1.69E-46
MS.gene054003	MS.gene22667	0.837854	4.07E-57	-1.69E-46
MS.gene054374	MS.gene22667	0.832913	7.21E-56	-1.69E-46
MS.gene054408	MS.gene22667	0.857139	2.00E-62	-1.69E-46
MS.gene054595	MS.gene22667	0.882891	7.12E-71	-1.69E-46
MS.gene054600	MS.gene22667	0.900722	5.51E-78	-1.69E-46
MS.gene054638	MS.gene22667	0.816459	5.47E-52	-1.69E-46
MS.gene054642	MS.gene22667	0.931912	1.87E-94	-1.69E-46
MS.gene054706	MS.gene22667	-0.827739	1.32E-54	-1.69E-46
MS.gene05470	MS.gene22667	0.893746	4.72E-75	-1.69E-46
MS.gene054927	MS.gene22667	0.833392	5.48E-56	-1.69E-46
MS.gene054954	MS.gene22667	0.944259	2.71E-103	-1.69E-46
MS.gene05505	MS.gene22667	0.814771	1.30E-51	-1.69E-46
MS.gene055154	MS.gene22667	-0.83344	5.33E-56	-1.69E-46
MS.gene055206	MS.gene22667	0.849013	4.25E-60	-1.69E-46
MS.gene055212	MS.gene22667	0.806862	6.69E-50	-1.69E-46
MS.gene055224	MS.gene22667	0.830045	3.66E-55	-1.69E-46
MS.gene055289	MS.gene22667	0.802642	5.09E-49	-1.69E-46
MS.gene055362	MS.gene22667	0.929878	3.69E-93	-1.69E-46
MS.gene055397	MS.gene22667	0.828485	8.76E-55	-1.69E-46
MS.gene055499	MS.gene22667	0.829631	4.62E-55	-1.69E-46
MS.gene055502	MS.gene22667	0.926401	4.94E-91	-1.69E-46
MS.gene055577	MS.gene22667	0.911901	3.59E-83	-1.69E-46
MS.gene055634	MS.gene22667	0.841141	5.69E-58	-1.69E-46
MS.gene055636	MS.gene22667	0.818417	1.98E-52	-1.69E-46
MS.gene055638	MS.gene22667	0.837529	4.93E-57	-1.69E-46
MS.gene055647	MS.gene22667	0.838909	2.17E-57	-1.69E-46
MS.gene055722	MS.gene22667	0.87159	6.09E-67	-1.69E-46
MS.gene055748	MS.gene22667	0.900662	5.86E-78	-1.69E-46
MS.gene055750	MS.gene22667	0.89601	5.56E-76	-1.69E-46
MS.gene055751	MS.gene22667	0.904772	8.65E-80	-1.69E-46
MS.gene055776	MS.gene22667	0.901073	3.87E-78	-1.69E-46
MS.gene055849	MS.gene22667	0.882493	9.95E-71	-1.69E-46
MS.gene05589	MS.gene22667	0.878563	2.54E-69	-1.69E-46
MS.gene05592	MS.gene22667	0.825529	4.46E-54	-1.69E-46
MS.gene055941	MS.gene22667	0.863806	1.91E-64	-1.69E-46
MS.gene055956	MS.gene22667	-0.804128	2.51E-49	-1.69E-46
MS.gene056040	MS.gene22667	0.825323	4.99E-54	-1.69E-46
MS.gene056046	MS.gene22667	0.84692	1.60E-59	-1.69E-46
MS.gene056083	MS.gene22667	0.864644	1.05E-64	-1.69E-46
MS.gene056166	MS.gene22667	0.81119	7.93E-51	-1.69E-46
MS.gene056374	MS.gene22667	0.884937	1.25E-71	-1.69E-46
MS.gene056409	MS.gene22667	0.817515	3.17E-52	-1.69E-46
MS.gene056446	MS.gene22667	0.818191	2.23E-52	-1.69E-46
MS.gene056449	MS.gene22667	0.819467	1.14E-52	-1.69E-46
MS.gene056450	MS.gene22667	0.827293	1.69E-54	-1.69E-46
MS.gene056487	MS.gene22667	0.823647	1.24E-53	-1.69E-46
MS.gene056504	MS.gene22667	0.916021	2.94E-85	-1.69E-46
MS.gene056510	MS.gene22667	0.938292	8.57E-99	-1.69E-46
MS.gene056549	MS.gene22667	0.86236	5.35E-64	-1.69E-46
MS.gene056550	MS.gene22667	-0.8357	1.44E-56	-1.69E-46
MS.gene056610	MS.gene22667	0.845826	3.19E-59	-1.69E-46
MS.gene056657	MS.gene22667	0.944285	2.58E-103	-1.69E-46
MS.gene056692	MS.gene22667	0.889028	3.49E-73	-1.69E-46
MS.gene056878	MS.gene22667	0.805555	1.26E-49	-1.69E-46
MS.gene056898	MS.gene22667	0.83255	8.87E-56	-1.69E-46
MS.gene057076	MS.gene22667	0.858527	7.75E-63	-1.69E-46
MS.gene057086	MS.gene22667	0.802194	6.30E-49	-1.69E-46
MS.gene057129	MS.gene22667	0.842056	3.26E-58	-1.69E-46
MS.gene057246	MS.gene22667	0.802332	5.90E-49	-1.69E-46
MS.gene057331	MS.gene22667	0.859762	3.30E-63	-1.69E-46
MS.gene057416	MS.gene22667	0.886745	2.62E-72	-1.69E-46
MS.gene05753	MS.gene22667	0.814409	1.56E-51	-1.69E-46
MS.gene057658	MS.gene22667	0.830402	3.00E-55	-1.69E-46
MS.gene057734	MS.gene22667	0.807789	4.26E-50	-1.69E-46
MS.gene057831	MS.gene22667	0.900746	5.38E-78	-1.69E-46
MS.gene057857	MS.gene22667	0.810859	9.35E-51	-1.69E-46
MS.gene057872	MS.gene22667	0.849029	4.20E-60	-1.69E-46
MS.gene05787	MS.gene22667	0.847254	1.30E-59	-1.69E-46
MS.gene057926	MS.gene22667	0.810078	1.38E-50	-1.69E-46
MS.gene057986	MS.gene22667	0.80603	1.00E-49	-1.69E-46
MS.gene058019	MS.gene22667	0.839219	1.81E-57	-1.69E-46
MS.gene058130	MS.gene22667	0.849309	3.51E-60	-1.69E-46
MS.gene058157	MS.gene22667	0.801589	8.38E-49	-1.69E-46
MS.gene058175	MS.gene22667	-0.801734	7.83E-49	-1.69E-46
MS.gene058334	MS.gene22667	-0.870052	1.95E-66	-1.69E-46
MS.gene058335	MS.gene22667	0.823962	1.04E-53	-1.69E-46
MS.gene058338	MS.gene22667	0.845607	3.65E-59	-1.69E-46
MS.gene05837	MS.gene22667	0.872204	3.81E-67	-1.69E-46
MS.gene058419	MS.gene22667	0.937046	6.54E-98	-1.69E-46
MS.gene058544	MS.gene22667	0.895893	6.21E-76	-1.69E-46
MS.gene058719	MS.gene22667	0.863073	3.23E-64	-1.69E-46
MS.gene058723	MS.gene22667	0.882562	9.39E-71	-1.69E-46
MS.gene058773	MS.gene22667	0.91663	1.41E-85	-1.69E-46
MS.gene058838	MS.gene22667	0.858593	7.41E-63	-1.69E-46
MS.gene05883	MS.gene22667	0.840846	6.80E-58	-1.69E-46
MS.gene059022	MS.gene22667	0.930672	1.16E-93	-1.69E-46
MS.gene059023	MS.gene22667	0.889701	1.91E-73	-1.69E-46
MS.gene059029	MS.gene22667	0.880506	5.19E-70	-1.69E-46
MS.gene059079	MS.gene22667	0.844209	8.71E-59	-1.69E-46
MS.gene05912	MS.gene22667	0.855379	6.56E-62	-1.69E-46
MS.gene05913	MS.gene22667	0.872392	3.30E-67	-1.69E-46
MS.gene05914	MS.gene22667	0.812373	4.38E-51	-1.69E-46
MS.gene059181	MS.gene22667	0.833004	6.84E-56	-1.69E-46
MS.gene05934	MS.gene22667	0.845932	2.98E-59	-1.69E-46
MS.gene059367	MS.gene22667	0.845416	4.12E-59	-1.69E-46
MS.gene059526	MS.gene22667	-0.838262	3.19E-57	-1.69E-46
MS.gene059536	MS.gene22667	0.830998	2.14E-55	-1.69E-46
MS.gene059667	MS.gene22667	0.834842	2.37E-56	-1.69E-46
MS.gene059677	MS.gene22667	0.945489	2.77E-104	-1.69E-46
MS.gene059703	MS.gene22667	-0.807526	4.84E-50	-1.69E-46
MS.gene059718	MS.gene22667	0.921659	2.69E-88	-1.69E-46
MS.gene059756	MS.gene22667	0.887689	1.14E-72	-1.69E-46
MS.gene059801	MS.gene22667	0.858179	9.84E-63	-1.69E-46
MS.gene059837	MS.gene22667	0.856768	2.57E-62	-1.69E-46
MS.gene059865	MS.gene22667	0.935842	4.48E-97	-1.69E-46
MS.gene059902	MS.gene22667	0.851996	6.17E-61	-1.69E-46
MS.gene059960	MS.gene22667	0.834729	2.53E-56	-1.69E-46
MS.gene06000	MS.gene22667	0.845388	4.19E-59	-1.69E-46
MS.gene060193	MS.gene22667	0.800469	1.42E-48	-1.69E-46
MS.gene060337	MS.gene22667	-0.823228	1.55E-53	-1.69E-46
MS.gene060482	MS.gene22667	0.850468	1.67E-60	-1.69E-46
MS.gene060526	MS.gene22667	0.827624	1.41E-54	-1.69E-46
MS.gene060595	MS.gene22667	-0.836495	9.05E-57	-1.69E-46
MS.gene060703	MS.gene22667	0.902352	1.06E-78	-1.69E-46
MS.gene060728	MS.gene22667	0.807644	4.57E-50	-1.69E-46
MS.gene060762	MS.gene22667	0.916974	9.33E-86	-1.69E-46
MS.gene060778	MS.gene22667	0.871893	4.83E-67	-1.69E-46
MS.gene06077	MS.gene22667	0.910643	1.49E-82	-1.69E-46
MS.gene060804	MS.gene22667	0.811521	6.72E-51	-1.69E-46
MS.gene060818	MS.gene22667	0.80141	9.12E-49	-1.69E-46
MS.gene060823	MS.gene22667	-0.819313	1.24E-52	-1.69E-46
MS.gene060835	MS.gene22667	0.834087	3.67E-56	-1.69E-46
MS.gene06092	MS.gene22667	0.866157	3.50E-65	-1.69E-46
MS.gene06097	MS.gene22667	0.807989	3.86E-50	-1.69E-46
MS.gene060982	MS.gene22667	0.916883	1.04E-85	-1.69E-46
MS.gene061041	MS.gene22667	0.805338	1.40E-49	-1.69E-46
MS.gene061134	MS.gene22667	0.867524	1.28E-65	-1.69E-46
MS.gene061150	MS.gene22667	0.900809	5.05E-78	-1.69E-46
MS.gene061171	MS.gene22667	0.844528	7.15E-59	-1.69E-46
MS.gene061200	MS.gene22667	0.850492	1.64E-60	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22667.t1	MTR_7g114900	100.000	203	0	0	12	214	74	276	3.71e-147	410
MS.gene22667.t1	MTR_1g108440	66.010	203	68	1	12	213	61	263	6.70e-93	273
MS.gene22667.t1	MTR_2g032540	25.234	214	145	5	12	213	73	283	2.47e-18	81.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene22667.t1	AT3G04790	78.325	203	44	0	12	214	70	272	1.87e-116	333
MS.gene22667.t1	AT2G01290	61.084	203	79	0	12	214	58	260	7.03e-87	258
MS.gene22667.t1	AT1G71100	59.903	207	78	1	12	213	54	260	1.11e-80	242
MS.gene22667.t1	AT5G44520	30.556	216	134	5	12	214	62	274	7.12e-22	91.3
MS.gene22667.t1	AT5G44520	30.556	216	134	5	12	214	92	304	1.23e-21	91.3

Find 62 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATTTCTCAACCTTGTTAA+AGG	0.149369	7.2:+2402701	MS.gene22667:CDS
GTTGAGAAGTTCGCCGAGTT+TGG	0.275002	7.2:-2402537	None:intergenic
TGGTATTCCTCTCTCTGTTC+TGG	0.303086	7.2:+2402628	MS.gene22667:CDS
AGCTTGTTCTTCGGTGCGTT+TGG	0.324267	7.2:-2402597	None:intergenic
TGCTCTCCTCCGTGAGAAAA+TGG	0.332089	7.2:+2402733	MS.gene22667:CDS
GTTGGAAATATAATTTGATT+AGG	0.342353	7.2:+2402861	MS.gene22667:CDS
GTCATCATTGCTGGTAAAAC+TGG	0.347429	7.2:+2403088	MS.gene22667:CDS
AGCAGCATTTGCATCTCTAA+TGG	0.354451	7.2:-2402999	None:intergenic
TGGTCCTCGGCCTCGGCAAC+CGG	0.371558	7.2:+2402491	MS.gene22667:CDS
AGCGGCATGGTCCTCGGCCT+CGG	0.401792	7.2:+2402484	MS.gene22667:CDS
TTCTTCGGTGCGTTTGGAAG+TGG	0.409826	7.2:-2402591	None:intergenic
GCTACCTCTGTCATCATTGC+TGG	0.413073	7.2:+2403079	MS.gene22667:CDS
GCTGAGATTTCGTCGCTTGA+AGG	0.433006	7.2:+2403025	MS.gene22667:CDS
TTAGAATTATCAGTAACATA+TGG	0.433220	7.2:-2402947	None:intergenic
GACGAAGGCGGCGGTGGAGC+CGG	0.434905	7.2:-2402510	None:intergenic
GCAGCATTTGCATCTCTAAT+GGG	0.454829	7.2:-2402998	None:intergenic
GTCTCTGGTCTCGGTGGAAG+CGG	0.462851	7.2:+2402806	MS.gene22667:CDS
ACGAAACTGGTCTCTGGTCT+CGG	0.463473	7.2:+2402797	MS.gene22667:CDS
CTCAACCTTGTTAAAGGCCG+CGG	0.475097	7.2:+2402707	MS.gene22667:CDS
CCTTTAACAAGGTTGAGAAA+TGG	0.475449	7.2:-2402701	None:intergenic
GGTGGTCGATGATACGAAAC+TGG	0.476820	7.2:+2402784	MS.gene22667:CDS
GGAGACGACGAAGGCGGCGG+TGG	0.479468	7.2:-2402516	None:intergenic
ATTAGAGATGCAAATGCTGC+TGG	0.490372	7.2:+2403001	MS.gene22667:CDS
CAAGAATTGTTCAAAGAAGA+AGG	0.494177	7.2:+2402887	MS.gene22667:CDS
GAAGAACAAGCTCGTTCTCT+TGG	0.494473	7.2:+2402608	MS.gene22667:CDS
GTCAAAAGCGGCATGGTCCT+CGG	0.496677	7.2:+2402478	MS.gene22667:CDS
CGGTTTAGCGATGCCGGTGG+AGG	0.498139	7.2:+2402826	MS.gene22667:CDS
AAGAGAACGAGCTTGTTCTT+CGG	0.503417	7.2:-2402606	None:intergenic
CTTGAAGGTGTCGTCGAGCA+TGG	0.504176	7.2:+2403040	MS.gene22667:CDS
GGAGCCGGTTGCCGAGGCCG+AGG	0.504214	7.2:-2402495	None:intergenic
TCTTCGGTGCGTTTGGAAGT+GGG	0.512477	7.2:-2402590	None:intergenic
TGGAAGCGGTTTAGCGATGC+CGG	0.518745	7.2:+2402820	MS.gene22667:CDS
GATGATACGAAACTGGTCTC+TGG	0.522213	7.2:+2402791	MS.gene22667:CDS
CACCGCCGCGGCCTTTAACA+AGG	0.522675	7.2:-2402712	None:intergenic
GCATGGTTTGTTCTTGAACA+TGG	0.523331	7.2:+2403057	MS.gene22667:CDS
CGTCTCGATCTCGCCATCGA+CGG	0.527285	7.2:+2402662	MS.gene22667:CDS
GGCGGTGGAGCCGGTTGCCG+AGG	0.528429	7.2:-2402501	None:intergenic
GATGATGTTGGTGAGTTCGC+CGG	0.539899	7.2:-2402561	None:intergenic
GCCTTCGTCGTCTCCAAACT+CGG	0.546205	7.2:+2402524	MS.gene22667:CDS
GGCGAACTCACCAACATCAT+CGG	0.560538	7.2:+2402563	MS.gene22667:CDS
CAAAACTGAACAACCTCCAC+CGG	0.562915	7.2:-2402839	None:intergenic
TTTGGAGACGACGAAGGCGG+CGG	0.566766	7.2:-2402519	None:intergenic
GCCGTTGAATATGTCAAAAG+CGG	0.580001	7.2:+2402466	None:intergenic
CACGACGAATTTATCAGAAG+CGG	0.584428	7.2:-2402762	None:intergenic
TTATCGTCCAGAACAGAGAG+AGG	0.606235	7.2:-2402635	None:intergenic
TTCTGATAAATTCGTCGTGG+TGG	0.606783	7.2:+2402766	MS.gene22667:CDS
GACTTCATCAGCACCGTCGA+TGG	0.609689	7.2:-2402675	None:intergenic
AGTGGGAACGCCGATGATGT+TGG	0.637767	7.2:-2402573	None:intergenic
AAGCGGTTTAGCGATGCCGG+TGG	0.640481	7.2:+2402823	MS.gene22667:CDS
GCCGAGTTTGGAGACGACGA+AGG	0.645857	7.2:-2402525	None:intergenic
CGTTGATGCGAAATTGAGAG+TGG	0.649594	7.2:+2402910	MS.gene22667:CDS
AAATTGAGAGTGGATGAAAG+TGG	0.649838	7.2:+2402920	MS.gene22667:CDS
TGAATATGTCAAAAGCGGCA+TGG	0.650597	7.2:+2402471	None:intergenic
GAGTTTGGAGACGACGAAGG+CGG	0.656291	7.2:-2402522	None:intergenic
CTCGGCGAACTTCTCAACTC+CGG	0.656946	7.2:+2402542	MS.gene22667:CDS
CGCTTCTGATAAATTCGTCG+TGG	0.657924	7.2:+2402763	MS.gene22667:CDS
AACCTTGTTAAAGGCCGCGG+CGG	0.661052	7.2:+2402710	MS.gene22667:CDS
CACGGAGGAGAGCACCGCCG+CGG	0.668975	7.2:-2402724	None:intergenic
AAACTGGTCTCTGGTCTCGG+TGG	0.677817	7.2:+2402800	MS.gene22667:CDS
TTTACCAGCAATGATGACAG+AGG	0.680041	7.2:-2403083	None:intergenic
TCTCCTCCGTGAGAAAATGG+TGG	0.693512	7.2:+2402736	MS.gene22667:CDS
TCGATGGCGAGATCGAGACG+AGG	0.700409	7.2:-2402659	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GTTGGAAATATAATTTGATT+AGG	+	chr7.2:2402861-2402880	MS.gene22667:CDS	20.0%
!!	TTAGAATTATCAGTAACATA+TGG	-	chr7.2:2402950-2402969	None:intergenic	20.0%
	CAAGAATTGTTCAAAGAAGA+AGG	+	chr7.2:2402887-2402906	MS.gene22667:CDS	30.0%
	AAATTGAGAGTGGATGAAAG+TGG	+	chr7.2:2402920-2402939	MS.gene22667:CDS	35.0%
	CCATTTCTCAACCTTGTTAA+AGG	+	chr7.2:2402701-2402720	MS.gene22667:CDS	35.0%
	CCTTTAACAAGGTTGAGAAA+TGG	-	chr7.2:2402704-2402723	None:intergenic	35.0%
	AGCAGCATTTGCATCTCTAA+TGG	-	chr7.2:2403002-2403021	None:intergenic	40.0%
	ATTAGAGATGCAAATGCTGC+TGG	+	chr7.2:2403001-2403020	MS.gene22667:CDS	40.0%
	CACGACGAATTTATCAGAAG+CGG	-	chr7.2:2402765-2402784	None:intergenic	40.0%
	GCAGCATTTGCATCTCTAAT+GGG	-	chr7.2:2403001-2403020	None:intergenic	40.0%
	GTCATCATTGCTGGTAAAAC+TGG	+	chr7.2:2403088-2403107	MS.gene22667:CDS	40.0%
	TTCTGATAAATTCGTCGTGG+TGG	+	chr7.2:2402766-2402785	MS.gene22667:CDS	40.0%
	TTTACCAGCAATGATGACAG+AGG	-	chr7.2:2403086-2403105	None:intergenic	40.0%
!	AAGAGAACGAGCTTGTTCTT+CGG	-	chr7.2:2402609-2402628	None:intergenic	40.0%
!!	GCATGGTTTGTTCTTGAACA+TGG	+	chr7.2:2403057-2403076	MS.gene22667:CDS	40.0%
!!	TGGAGGTTGTTCAGTTTTGT+TGG	+	chr7.2:2402843-2402862	MS.gene22667:CDS	40.0%
	CAAAACTGAACAACCTCCAC+CGG	-	chr7.2:2402842-2402861	None:intergenic	45.0%
	CGCTTCTGATAAATTCGTCG+TGG	+	chr7.2:2402763-2402782	MS.gene22667:CDS	45.0%
	CGTTGATGCGAAATTGAGAG+TGG	+	chr7.2:2402910-2402929	MS.gene22667:CDS	45.0%
	GAAGAACAAGCTCGTTCTCT+TGG	+	chr7.2:2402608-2402627	MS.gene22667:CDS	45.0%
	TGGTATTCCTCTCTCTGTTC+TGG	+	chr7.2:2402628-2402647	MS.gene22667:CDS	45.0%
	TTATCGTCCAGAACAGAGAG+AGG	-	chr7.2:2402638-2402657	None:intergenic	45.0%
!	GATGATACGAAACTGGTCTC+TGG	+	chr7.2:2402791-2402810	MS.gene22667:CDS	45.0%
	CTCAACCTTGTTAAAGGCCG+CGG	+	chr7.2:2402707-2402726	MS.gene22667:CDS	50.0%
	GCTACCTCTGTCATCATTGC+TGG	+	chr7.2:2403079-2403098	MS.gene22667:CDS	50.0%
	GCTGAGATTTCGTCGCTTGA+AGG	+	chr7.2:2403025-2403044	MS.gene22667:CDS	50.0%
	GGCGAACTCACCAACATCAT+CGG	+	chr7.2:2402563-2402582	MS.gene22667:CDS	50.0%
	GGTGGTCGATGATACGAAAC+TGG	+	chr7.2:2402784-2402803	MS.gene22667:CDS	50.0%
	GTTGAGAAGTTCGCCGAGTT+TGG	-	chr7.2:2402540-2402559	None:intergenic	50.0%
	TCTCCTCCGTGAGAAAATGG+TGG	+	chr7.2:2402736-2402755	MS.gene22667:CDS	50.0%
	TGCTCTCCTCCGTGAGAAAA+TGG	+	chr7.2:2402733-2402752	MS.gene22667:CDS	50.0%
!	ACGAAACTGGTCTCTGGTCT+CGG	+	chr7.2:2402797-2402816	MS.gene22667:CDS	50.0%
!	AGCTTGTTCTTCGGTGCGTT+TGG	-	chr7.2:2402600-2402619	None:intergenic	50.0%
!	CGGCTTCCACCATTTTCTCA+CGG	-	chr7.2:2402745-2402764	None:intergenic	50.0%
!	CTTCCACCATTTTCTCACGG+AGG	-	chr7.2:2402742-2402761	None:intergenic	50.0%
!	GATGATGTTGGTGAGTTCGC+CGG	-	chr7.2:2402564-2402583	None:intergenic	50.0%
!	TCTTCGGTGCGTTTGGAAGT+GGG	-	chr7.2:2402593-2402612	None:intergenic	50.0%
!	TTCTTCGGTGCGTTTGGAAG+TGG	-	chr7.2:2402594-2402613	None:intergenic	50.0%
	AACCTTGTTAAAGGCCGCGG+CGG	+	chr7.2:2402710-2402729	MS.gene22667:CDS	55.0%
	AGTGGGAACGCCGATGATGT+TGG	-	chr7.2:2402576-2402595	None:intergenic	55.0%
	CTCGGCGAACTTCTCAACTC+CGG	+	chr7.2:2402542-2402561	MS.gene22667:CDS	55.0%
	GACTTCATCAGCACCGTCGA+TGG	-	chr7.2:2402678-2402697	None:intergenic	55.0%
	GAGTTTGGAGACGACGAAGG+CGG	-	chr7.2:2402525-2402544	None:intergenic	55.0%
	GCCTTCGTCGTCTCCAAACT+CGG	+	chr7.2:2402524-2402543	MS.gene22667:CDS	55.0%
	GTCAAAAGCGGCATGGTCCT+CGG	+	chr7.2:2402478-2402497	MS.gene22667:CDS	55.0%
	TGGAAGCGGTTTAGCGATGC+CGG	+	chr7.2:2402820-2402839	MS.gene22667:CDS	55.0%
!	AAACTGGTCTCTGGTCTCGG+TGG	+	chr7.2:2402800-2402819	MS.gene22667:CDS	55.0%
!!	CTTGAAGGTGTCGTCGAGCA+TGG	+	chr7.2:2403040-2403059	MS.gene22667:CDS	55.0%
	AAGCGGTTTAGCGATGCCGG+TGG	+	chr7.2:2402823-2402842	MS.gene22667:CDS	60.0%
	CGTCTCGATCTCGCCATCGA+CGG	+	chr7.2:2402662-2402681	MS.gene22667:CDS	60.0%
	GCCGAGTTTGGAGACGACGA+AGG	-	chr7.2:2402528-2402547	None:intergenic	60.0%
	GTCTCTGGTCTCGGTGGAAG+CGG	+	chr7.2:2402806-2402825	MS.gene22667:CDS	60.0%
	TCGATGGCGAGATCGAGACG+AGG	-	chr7.2:2402662-2402681	None:intergenic	60.0%
	TTTGGAGACGACGAAGGCGG+CGG	-	chr7.2:2402522-2402541	None:intergenic	60.0%
	CACCGCCGCGGCCTTTAACA+AGG	-	chr7.2:2402715-2402734	None:intergenic	65.0%
	CGGTTTAGCGATGCCGGTGG+AGG	+	chr7.2:2402826-2402845	MS.gene22667:CDS	65.0%
	AGCGGCATGGTCCTCGGCCT+CGG	+	chr7.2:2402484-2402503	MS.gene22667:CDS	70.0%
	TGGTCCTCGGCCTCGGCAAC+CGG	+	chr7.2:2402491-2402510	MS.gene22667:CDS	70.0%
	GACGAAGGCGGCGGTGGAGC+CGG	-	chr7.2:2402513-2402532	None:intergenic	75.0%
	GGAGACGACGAAGGCGGCGG+TGG	-	chr7.2:2402519-2402538	None:intergenic	75.0%
!!	CACGGAGGAGAGCACCGCCG+CGG	-	chr7.2:2402727-2402746	None:intergenic	75.0%
!	GGAGCCGGTTGCCGAGGCCG+AGG	-	chr7.2:2402498-2402517	None:intergenic	80.0%
!	GGCGGTGGAGCCGGTTGCCG+AGG	-	chr7.2:2402504-2402523	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	2402476	2403117	2402476	ID=MS.gene22667
chr7.2	mRNA	2402476	2403117	2402476	ID=MS.gene22667.t1;Parent=MS.gene22667
chr7.2	exon	2402476	2403117	2402476	ID=MS.gene22667.t1.exon1;Parent=MS.gene22667.t1
chr7.2	CDS	2402476	2403117	2402476	ID=cds.MS.gene22667.t1;Parent=MS.gene22667.t1

Gene Sequence

>MS.gene22667

ATGTCAAAAGCGGCATGGTCCTCGGCCTCGGCAACCGGCTCCACCGCCGCCTTCGTCGTCTCCAAACTCGGCGAACTTCTCAACTCCGGCGAACTCACCAACATCATCGGCGTTCCCACTTCCAAACGCACCGAAGAACAAGCTCGTTCTCTTGGTATTCCTCTCTCTGTTCTGGACGATAATCCTCGTCTCGATCTCGCCATCGACGGTGCTGATGAAGTCGATCCATTTCTCAACCTTGTTAAAGGCCGCGGCGGTGCTCTCCTCCGTGAGAAAATGGTGGAAGCCGCTTCTGATAAATTCGTCGTGGTGGTCGATGATACGAAACTGGTCTCTGGTCTCGGTGGAAGCGGTTTAGCGATGCCGGTGGAGGTTGTTCAGTTTTGTTGGAAATATAATTTGATTAGGCTACAAGAATTGTTCAAAGAAGAAGGCGTTGATGCGAAATTGAGAGTGGATGAAAGTGGAAAACCATATGTTACTGATAATTCTAATTACATTGTTGATTTGTATTTTAAGACTCCCATTAGAGATGCAAATGCTGCTGGAGCTGAGATTTCGTCGCTTGAAGGTGTCGTCGAGCATGGTTTGTTCTTGAACATGGCTACCTCTGTCATCATTGCTGGTAAAACTGGTGTTGAA

Protein sequence

>MS.gene22667.t1

MSKAAWSSASATGSTAAFVVSKLGELLNSGELTNIIGVPTSKRTEEQARSLGIPLSVLDDNPRLDLAIDGADEVDPFLNLVKGRGGALLREKMVEAASDKFVVVVDDTKLVSGLGGSGLAMPVEVVQFCWKYNLIRLQELFKEEGVDAKLRVDESGKPYVTDNSNYIVDLYFKTPIRDANAAGAEISSLEGVVEHGLFLNMATSVIIAGKTGVE