Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558780 | XP_003630282.1 | 96.698 | 424 | 10 | 1 | 1 | 424 | 1 | 420 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558780 | sp|Q941D6|HDA14_ARATH | 71.537 | 397 | 107 | 1 | 34 | 424 | 27 | 423 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558780 | G7LE36 | 96.698 | 424 | 10 | 1 | 1 | 424 | 1 | 420 | 0.0 | 839 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0558780 | 0.805620 | 1.222269e-49 | -8.615850e-47 |
| Msa0002690 | Msa0558780 | 0.810253 | 1.263770e-50 | -8.615850e-47 |
| Msa0002700 | Msa0558780 | 0.810049 | 1.398439e-50 | -8.615850e-47 |
| Msa0007570 | Msa0558780 | 0.817838 | 2.679341e-52 | -8.615850e-47 |
| Msa0007810 | Msa0558780 | 0.815252 | 1.016717e-51 | -8.615850e-47 |
| Msa0011410 | Msa0558780 | 0.801921 | 7.167727e-49 | -8.615850e-47 |
| Msa0011440 | Msa0558780 | 0.816238 | 6.130934e-52 | -8.615850e-47 |
| Msa0011920 | Msa0558780 | 0.815181 | 1.054413e-51 | -8.615850e-47 |
| Msa0017300 | Msa0558780 | 0.803898 | 2.797921e-49 | -8.615850e-47 |
| Msa0033190 | Msa0558780 | 0.824766 | 6.755682e-54 | -8.615850e-47 |
| Msa0037180 | Msa0558780 | -0.803020 | 4.255126e-49 | -8.615850e-47 |
| Msa0037650 | Msa0558780 | 0.803564 | 3.282848e-49 | -8.615850e-47 |
| Msa0046020 | Msa0558780 | 0.814916 | 1.207412e-51 | -8.615850e-47 |
| Msa0053260 | Msa0558780 | 0.809087 | 2.250712e-50 | -8.615850e-47 |
| Msa0056230 | Msa0558780 | 0.803390 | 3.566796e-49 | -8.615850e-47 |
| Msa0065670 | Msa0558780 | 0.808434 | 3.103001e-50 | -8.615850e-47 |
| Msa0074860 | Msa0558780 | 0.832121 | 1.132202e-55 | -8.615850e-47 |
| Msa0075990 | Msa0558780 | 0.836800 | 7.565742e-57 | -8.615850e-47 |
| Msa0079840 | Msa0558780 | 0.828570 | 8.355084e-55 | -8.615850e-47 |
| Msa0081610 | Msa0558780 | 0.835533 | 1.588013e-56 | -8.615850e-47 |
| Msa0092220 | Msa0558780 | -0.808012 | 3.817893e-50 | -8.615850e-47 |
| Msa0095810 | Msa0558780 | 0.805761 | 1.142042e-49 | -8.615850e-47 |
| Msa0098500 | Msa0558780 | 0.840624 | 7.773127e-58 | -8.615850e-47 |
| Msa0110350 | Msa0558780 | 0.817001 | 4.135167e-52 | -8.615850e-47 |
| Msa0116780 | Msa0558780 | 0.814093 | 1.836279e-51 | -8.615850e-47 |
| Msa0127220 | Msa0558780 | 0.833233 | 5.998488e-56 | -8.615850e-47 |
| Msa0127350 | Msa0558780 | 0.823662 | 1.227906e-53 | -8.615850e-47 |
| Msa0127910 | Msa0558780 | 0.838843 | 2.260723e-57 | -8.615850e-47 |
| Msa0138990 | Msa0558780 | 0.820364 | 7.131097e-53 | -8.615850e-47 |
| Msa0154880 | Msa0558780 | 0.809646 | 1.706937e-50 | -8.615850e-47 |
| Msa0154890 | Msa0558780 | 0.814485 | 1.504039e-51 | -8.615850e-47 |
| Msa0158890 | Msa0558780 | 0.802124 | 6.511770e-49 | -8.615850e-47 |
| Msa0159240 | Msa0558780 | 0.810999 | 8.717192e-51 | -8.615850e-47 |
| Msa0163540 | Msa0558780 | 0.841270 | 5.261724e-58 | -8.615850e-47 |
| Msa0168770 | Msa0558780 | 0.808684 | 2.744118e-50 | -8.615850e-47 |
| Msa0173950 | Msa0558780 | 0.829909 | 3.954667e-55 | -8.615850e-47 |
| Msa0174060 | Msa0558780 | 0.817952 | 2.525140e-52 | -8.615850e-47 |
| Msa0186400 | Msa0558780 | 0.829324 | 5.487068e-55 | -8.615850e-47 |
| Msa0194750 | Msa0558780 | 0.804452 | 2.146014e-49 | -8.615850e-47 |
| Msa0199160 | Msa0558780 | 0.807051 | 6.105410e-50 | -8.615850e-47 |
| Msa0208040 | Msa0558780 | 0.806849 | 6.736658e-50 | -8.615850e-47 |
| Msa0209370 | Msa0558780 | 0.819065 | 1.412083e-52 | -8.615850e-47 |
| Msa0216150 | Msa0558780 | 0.821537 | 3.830681e-53 | -8.615850e-47 |
| Msa0225070 | Msa0558780 | 0.800681 | 1.285931e-48 | -8.615850e-47 |
| Msa0225790 | Msa0558780 | 0.801019 | 1.096901e-48 | -8.615850e-47 |
| Msa0229350 | Msa0558780 | 0.820688 | 6.010430e-53 | -8.615850e-47 |
| Msa0236690 | Msa0558780 | 0.811291 | 7.536375e-51 | -8.615850e-47 |
| Msa0237650 | Msa0558780 | 0.807374 | 5.215981e-50 | -8.615850e-47 |
| Msa0368450 | Msa0558780 | 0.825931 | 3.580876e-54 | -8.615850e-47 |
| Msa0385850 | Msa0558780 | 0.811279 | 7.581563e-51 | -8.615850e-47 |
| Msa0387630 | Msa0558780 | 0.851200 | 1.035889e-60 | -8.615850e-47 |
| Msa0389080 | Msa0558780 | 0.820243 | 7.602048e-53 | -8.615850e-47 |
| Msa0390590 | Msa0558780 | 0.839053 | 1.994352e-57 | -8.615850e-47 |
| Msa0402490 | Msa0558780 | 0.820486 | 6.686235e-53 | -8.615850e-47 |
| Msa0403740 | Msa0558780 | 0.807068 | 6.053318e-50 | -8.615850e-47 |
| Msa0412580 | Msa0558780 | 0.829435 | 5.155477e-55 | -8.615850e-47 |
| Msa0416430 | Msa0558780 | 0.811831 | 5.750788e-51 | -8.615850e-47 |
| Msa0427230 | Msa0558780 | 0.800547 | 1.369523e-48 | -8.615850e-47 |
| Msa0427890 | Msa0558780 | 0.806890 | 6.602930e-50 | -8.615850e-47 |
| Msa0428720 | Msa0558780 | 0.814148 | 1.785143e-51 | -8.615850e-47 |
| Msa0437820 | Msa0558780 | 0.818220 | 2.195972e-52 | -8.615850e-47 |
| Msa0449910 | Msa0558780 | 0.812818 | 3.501516e-51 | -8.615850e-47 |
| Msa0450230 | Msa0558780 | 0.812419 | 4.279801e-51 | -8.615850e-47 |
| Msa0450890 | Msa0558780 | 0.821940 | 3.091227e-53 | -8.615850e-47 |
| Msa0456450 | Msa0558780 | 0.816877 | 4.409311e-52 | -8.615850e-47 |
| Msa0457070 | Msa0558780 | 0.825202 | 5.331403e-54 | -8.615850e-47 |
| Msa0460510 | Msa0558780 | 0.809354 | 1.972008e-50 | -8.615850e-47 |
| Msa0461620 | Msa0558780 | 0.809219 | 2.107900e-50 | -8.615850e-47 |
| Msa0463030 | Msa0558780 | 0.814603 | 1.416450e-51 | -8.615850e-47 |
| Msa0473740 | Msa0558780 | 0.800414 | 1.457188e-48 | -8.615850e-47 |
| Msa0474120 | Msa0558780 | 0.809316 | 2.009982e-50 | -8.615850e-47 |
| Msa0476440 | Msa0558780 | 0.804829 | 1.790311e-49 | -8.615850e-47 |
| Msa0476570 | Msa0558780 | 0.805563 | 1.256966e-49 | -8.615850e-47 |
| Msa0476600 | Msa0558780 | 0.801659 | 8.110991e-49 | -8.615850e-47 |
| Msa0476890 | Msa0558780 | 0.801620 | 8.263519e-49 | -8.615850e-47 |
| Msa0240630 | Msa0558780 | 0.817825 | 2.696941e-52 | -8.615850e-47 |
| Msa0260640 | Msa0558780 | 0.802437 | 5.613943e-49 | -8.615850e-47 |
| Msa0261350 | Msa0558780 | 0.810367 | 1.193829e-50 | -8.615850e-47 |
| Msa0266140 | Msa0558780 | 0.814206 | 1.733468e-51 | -8.615850e-47 |
| Msa0267450 | Msa0558780 | 0.804321 | 2.285213e-49 | -8.615850e-47 |
| Msa0267510 | Msa0558780 | 0.808165 | 3.541940e-50 | -8.615850e-47 |
| Msa0269430 | Msa0558780 | 0.802858 | 4.595747e-49 | -8.615850e-47 |
| Msa0269660 | Msa0558780 | 0.821291 | 4.366283e-53 | -8.615850e-47 |
| Msa0270730 | Msa0558780 | 0.810408 | 1.170155e-50 | -8.615850e-47 |
| Msa0290590 | Msa0558780 | 0.804081 | 2.563707e-49 | -8.615850e-47 |
| Msa0292060 | Msa0558780 | 0.812105 | 5.010791e-51 | -8.615850e-47 |
| Msa0299130 | Msa0558780 | 0.816323 | 5.866437e-52 | -8.615850e-47 |
| Msa0304060 | Msa0558780 | 0.821325 | 4.286693e-53 | -8.615850e-47 |
| Msa0330240 | Msa0558780 | 0.828237 | 1.005261e-54 | -8.615850e-47 |
| Msa0331070 | Msa0558780 | 0.824307 | 8.664470e-54 | -8.615850e-47 |
| Msa0333350 | Msa0558780 | 0.807506 | 4.888926e-50 | -8.615850e-47 |
| Msa0334450 | Msa0558780 | 0.825239 | 5.224019e-54 | -8.615850e-47 |
| Msa0340700 | Msa0558780 | 0.816412 | 5.605940e-52 | -8.615850e-47 |
| Msa0362440 | Msa0558780 | 0.820395 | 7.017596e-53 | -8.615850e-47 |
| Msa0363180 | Msa0558780 | 0.824347 | 8.477479e-54 | -8.615850e-47 |
| Msa0364030 | Msa0558780 | 0.806765 | 7.018292e-50 | -8.615850e-47 |
| Msa0493180 | Msa0558780 | 0.802399 | 5.714890e-49 | -8.615850e-47 |
| Msa0497140 | Msa0558780 | 0.828482 | 8.771848e-55 | -8.615850e-47 |
| Msa0502900 | Msa0558780 | 0.821893 | 3.169281e-53 | -8.615850e-47 |
| Msa0507960 | Msa0558780 | 0.812480 | 4.150600e-51 | -8.615850e-47 |
| Msa0518150 | Msa0558780 | 0.807680 | 4.491829e-50 | -8.615850e-47 |
| Msa0521260 | Msa0558780 | 0.815261 | 1.012015e-51 | -8.615850e-47 |
| Msa0523420 | Msa0558780 | 0.831307 | 1.797672e-55 | -8.615850e-47 |
| Msa0526520 | Msa0558780 | 0.837883 | 3.995058e-57 | -8.615850e-47 |
| Msa0538050 | Msa0558780 | 0.826584 | 2.503572e-54 | -8.615850e-47 |
| Msa0545750 | Msa0558780 | 0.809534 | 1.804877e-50 | -8.615850e-47 |
| Msa0548160 | Msa0558780 | 0.802561 | 5.292940e-49 | -8.615850e-47 |
| Msa0550980 | Msa0558780 | 0.824555 | 7.574804e-54 | -8.615850e-47 |
| Msa0550990 | Msa0558780 | 0.807610 | 4.647615e-50 | -8.615850e-47 |
| Msa0557440 | Msa0558780 | 0.814719 | 1.334762e-51 | -8.615850e-47 |
| Msa0558010 | Msa0558780 | 0.846187 | 2.542344e-59 | -8.615850e-47 |
| Msa0558780 | Msa0558800 | 0.804654 | 1.947424e-49 | -8.615850e-47 |
| Msa0558780 | Msa0559440 | 0.813723 | 2.215244e-51 | -8.615850e-47 |
| Msa0558780 | Msa0560010 | 0.805812 | 1.113958e-49 | -8.615850e-47 |
| Msa0558780 | Msa0563230 | 0.824436 | 8.082228e-54 | -8.615850e-47 |
| Msa0558780 | Msa0567190 | 0.810740 | 9.918427e-51 | -8.615850e-47 |
| Msa0558780 | Msa0567420 | 0.808302 | 3.310233e-50 | -8.615850e-47 |
| Msa0558780 | Msa0568050 | 0.812724 | 3.671733e-51 | -8.615850e-47 |
| Msa0558780 | Msa0568300 | 0.823525 | 1.321612e-53 | -8.615850e-47 |
| Msa0558780 | Msa0569540 | 0.841573 | 4.377995e-58 | -8.615850e-47 |
| Msa0558780 | Msa0569580 | 0.876821 | 1.029339e-68 | -8.615850e-47 |
| Msa0558780 | Msa0569980 | 0.811221 | 7.804184e-51 | -8.615850e-47 |
| Msa0558780 | Msa0571900 | 0.834314 | 3.220601e-56 | -8.615850e-47 |
| Msa0558780 | Msa0572730 | 0.847379 | 1.200254e-59 | -8.615850e-47 |
| Msa0558780 | Msa0573940 | 0.822113 | 2.817919e-53 | -8.615850e-47 |
| Msa0558780 | Msa0576020 | 0.816718 | 4.787279e-52 | -8.615850e-47 |
| Msa0558780 | Msa0580410 | 0.832852 | 7.461375e-56 | -8.615850e-47 |
| Msa0558780 | Msa0580890 | 0.815588 | 8.559026e-52 | -8.615850e-47 |
| Msa0558780 | Msa0582270 | 0.814075 | 1.852859e-51 | -8.615850e-47 |
| Msa0558780 | Msa0583270 | 0.813807 | 2.122621e-51 | -8.615850e-47 |
| Msa0558780 | Msa0585720 | 0.824166 | 9.351610e-54 | -8.615850e-47 |
| Msa0558780 | Msa0585810 | 0.818519 | 1.878768e-52 | -8.615850e-47 |
| Msa0558780 | Msa0590620 | 0.844829 | 5.933292e-59 | -8.615850e-47 |
| Msa0558780 | Msa0605150 | 0.821370 | 4.186782e-53 | -8.615850e-47 |
| Msa0558780 | Msa0605210 | 0.804864 | 1.759913e-49 | -8.615850e-47 |
| Msa0558780 | Msa0606340 | 0.822336 | 2.501549e-53 | -8.615850e-47 |
| Msa0558780 | Msa0606350 | 0.817753 | 2.800377e-52 | -8.615850e-47 |
| Msa0558780 | Msa0610240 | 0.805631 | 1.215961e-49 | -8.615850e-47 |
| Msa0558780 | Msa0614060 | 0.831841 | 1.327706e-55 | -8.615850e-47 |
| Msa0558780 | Msa0616890 | 0.827886 | 1.220813e-54 | -8.615850e-47 |
| Msa0558780 | Msa0617470 | 0.815549 | 8.734260e-52 | -8.615850e-47 |
| Msa0558780 | Msa0621670 | 0.826213 | 3.069524e-54 | -8.615850e-47 |
| Msa0558780 | Msa0625900 | 0.806188 | 9.284481e-50 | -8.615850e-47 |
| Msa0558780 | Msa0626920 | -0.801993 | 6.927522e-49 | -8.615850e-47 |
| Msa0558780 | Msa0635070 | 0.804632 | 1.967982e-49 | -8.615850e-47 |
| Msa0558780 | Msa0638300 | 0.833319 | 5.710183e-56 | -8.615850e-47 |
| Msa0558780 | Msa0638550 | 0.839123 | 1.912332e-57 | -8.615850e-47 |
| Msa0558780 | Msa0641800 | 0.833455 | 5.279728e-56 | -8.615850e-47 |
| Msa0558780 | Msa0654400 | 0.834136 | 3.569287e-56 | -8.615850e-47 |
| Msa0558780 | Msa0654500 | 0.815813 | 7.628438e-52 | -8.615850e-47 |
| Msa0558780 | Msa0656570 | 0.834694 | 2.583978e-56 | -8.615850e-47 |
| Msa0558780 | Msa0658520 | 0.818225 | 2.190215e-52 | -8.615850e-47 |
| Msa0558780 | Msa0661540 | 0.836267 | 1.034366e-56 | -8.615850e-47 |
| Msa0558780 | Msa0662670 | 0.826415 | 2.747523e-54 | -8.615850e-47 |
| Msa0558780 | Msa0663580 | 0.827251 | 1.734445e-54 | -8.615850e-47 |
| Msa0558780 | Msa0663690 | 0.806812 | 6.858719e-50 | -8.615850e-47 |
| Msa0558780 | Msa0671300 | 0.815406 | 9.395012e-52 | -8.615850e-47 |
| Msa0558780 | Msa0676570 | 0.826468 | 2.668002e-54 | -8.615850e-47 |
| Msa0558780 | Msa0683200 | 0.816762 | 4.678020e-52 | -8.615850e-47 |
| Msa0558780 | Msa0685810 | 0.835360 | 1.756011e-56 | -8.615850e-47 |
| Msa0558780 | Msa0685860 | 0.822230 | 2.648038e-53 | -8.615850e-47 |
| Msa0558780 | Msa0688880 | 0.820857 | 5.496076e-53 | -8.615850e-47 |
| Msa0558780 | Msa0690100 | 0.836559 | 8.716237e-57 | -8.615850e-47 |
| Msa0558780 | Msa0697230 | 0.803887 | 2.812584e-49 | -8.615850e-47 |
| Msa0558780 | Msa0700250 | 0.810505 | 1.115074e-50 | -8.615850e-47 |
| Msa0558780 | Msa0700870 | 0.813675 | 2.269551e-51 | -8.615850e-47 |
| Msa0558780 | Msa0700930 | 0.815622 | 8.414147e-52 | -8.615850e-47 |
| Msa0558780 | Msa0701800 | 0.831022 | 2.112525e-55 | -8.615850e-47 |
| Msa0558780 | Msa0702020 | 0.828673 | 7.888473e-55 | -8.615850e-47 |
| Msa0558780 | Msa0702690 | 0.812445 | 4.225652e-51 | -8.615850e-47 |
| Msa0558780 | Msa0703430 | 0.810292 | 1.239501e-50 | -8.615850e-47 |
| Msa0558780 | Msa0708870 | 0.824219 | 9.087841e-54 | -8.615850e-47 |
| Msa0558780 | Msa0711110 | 0.802150 | 6.430702e-49 | -8.615850e-47 |
| Msa0558780 | Msa0717540 | 0.806000 | 1.017147e-49 | -8.615850e-47 |
| Msa0558780 | Msa0719330 | 0.805996 | 1.019196e-49 | -8.615850e-47 |
| Msa0558780 | Msa0729740 | 0.800440 | 1.440073e-48 | -8.615850e-47 |
| Msa0558780 | Msa0742370 | 0.802182 | 6.333610e-49 | -8.615850e-47 |
| Msa0558780 | Msa0745270 | 0.810151 | 1.329420e-50 | -8.615850e-47 |
| Msa0558780 | Msa0750490 | 0.846116 | 2.658061e-59 | -8.615850e-47 |
| Msa0558780 | Msa0754020 | 0.820658 | 6.106472e-53 | -8.615850e-47 |
| Msa0558780 | Msa0758880 | 0.807688 | 4.473491e-50 | -8.615850e-47 |
| Msa0558780 | Msa0762480 | 0.800501 | 1.398976e-48 | -8.615850e-47 |
| Msa0558780 | Msa0770050 | 0.812210 | 4.753886e-51 | -8.615850e-47 |
| Msa0558780 | Msa0770540 | 0.806198 | 9.242140e-50 | -8.615850e-47 |
| Msa0558780 | Msa0772160 | 0.833414 | 5.408162e-56 | -8.615850e-47 |
| Msa0558780 | Msa0779450 | 0.821964 | 3.050479e-53 | -8.615850e-47 |
| Msa0558780 | Msa0793130 | 0.812799 | 3.535134e-51 | -8.615850e-47 |
| Msa0558780 | Msa0795910 | 0.829924 | 3.920355e-55 | -8.615850e-47 |
| Msa0558780 | Msa0801320 | 0.822717 | 2.039821e-53 | -8.615850e-47 |
| Msa0558780 | Msa0801630 | 0.804336 | 2.268975e-49 | -8.615850e-47 |
| Msa0558780 | Msa0807100 | 0.828078 | 1.097901e-54 | -8.615850e-47 |
| Msa0558780 | Msa0829210 | 0.804100 | 2.540218e-49 | -8.615850e-47 |
| Msa0558780 | Msa0829250 | 0.825627 | 4.228261e-54 | -8.615850e-47 |
| Msa0558780 | Msa0833030 | 0.810678 | 1.022944e-50 | -8.615850e-47 |
| Msa0558780 | Msa0833360 | 0.827424 | 1.576759e-54 | -8.615850e-47 |
| Msa0558780 | Msa0842370 | 0.809001 | 2.347784e-50 | -8.615850e-47 |
| Msa0558780 | Msa0860630 | 0.808056 | 3.736100e-50 | -8.615850e-47 |
| Msa0558780 | Msa0866060 | 0.803716 | 3.052332e-49 | -8.615850e-47 |
| Msa0558780 | Msa0869320 | 0.831279 | 1.826099e-55 | -8.615850e-47 |
| Msa0558780 | Msa0869420 | 0.809567 | 1.775242e-50 | -8.615850e-47 |
| Msa0558780 | Msa0872800 | 0.804763 | 1.847809e-49 | -8.615850e-47 |
| Msa0558780 | Msa0876680 | 0.803095 | 4.105975e-49 | -8.615850e-47 |
| Msa0558780 | Msa0906100 | 0.807193 | 5.696560e-50 | -8.615850e-47 |
| Msa0558780 | Msa0924840 | 0.807039 | 6.142192e-50 | -8.615850e-47 |
| Msa0558780 | Msa0924980 | 0.803872 | 2.833492e-49 | -8.615850e-47 |
| Msa0558780 | Msa0925030 | 0.817838 | 2.679469e-52 | -8.615850e-47 |
| Msa0558780 | Msa0925630 | 0.811596 | 6.468844e-51 | -8.615850e-47 |
| Msa0558780 | Msa0931000 | 0.809404 | 1.924137e-50 | -8.615850e-47 |
| Msa0558780 | Msa0931550 | 0.803121 | 4.054577e-49 | -8.615850e-47 |
| Msa0558780 | Msa0934290 | 0.839132 | 1.902139e-57 | -8.615850e-47 |
| Msa0558780 | Msa0941320 | 0.827288 | 1.699599e-54 | -8.615850e-47 |
| Msa0558780 | Msa0947550 | 0.858942 | 5.823962e-63 | -8.615850e-47 |
| Msa0558780 | Msa0956600 | 0.839008 | 2.049016e-57 | -8.615850e-47 |
| Msa0558780 | Msa0971690 | 0.813860 | 2.066859e-51 | -8.615850e-47 |
| Msa0558780 | Msa0971780 | 0.844360 | 7.935949e-59 | -8.615850e-47 |
| Msa0558780 | Msa0998660 | 0.818374 | 2.026262e-52 | -8.615850e-47 |
| Msa0558780 | Msa1002550 | 0.800496 | 1.402702e-48 | -8.615850e-47 |
| Msa0558780 | Msa1004300 | 0.844589 | 6.882894e-59 | -8.615850e-47 |
| Msa0558780 | Msa1014550 | 0.815213 | 1.037207e-51 | -8.615850e-47 |
| Msa0558780 | Msa1020160 | 0.822781 | 1.971840e-53 | -8.615850e-47 |
| Msa0558780 | Msa1025440 | 0.814657 | 1.378267e-51 | -8.615850e-47 |
| Msa0558780 | Msa1031190 | 0.803214 | 3.879637e-49 | -8.615850e-47 |
| Msa0558780 | Msa1032790 | 0.800866 | 1.178773e-48 | -8.615850e-47 |
| Msa0558780 | Msa1038610 | 0.804308 | 2.299353e-49 | -8.615850e-47 |
| Msa0558780 | Msa1039150 | 0.823131 | 1.633400e-53 | -8.615850e-47 |
| Msa0558780 | Msa1042420 | 0.815065 | 1.119130e-51 | -8.615850e-47 |
| Msa0558780 | Msa1044050 | 0.821079 | 4.884162e-53 | -8.615850e-47 |
| Msa0558780 | Msa1055520 | 0.851320 | 9.581694e-61 | -8.615850e-47 |
| Msa0558780 | Msa1070370 | 0.801273 | 9.733306e-49 | -8.615850e-47 |
| Msa0558780 | Msa1078210 | 0.819455 | 1.151065e-52 | -8.615850e-47 |
| Msa0558780 | Msa1078590 | 0.819868 | 9.263560e-53 | -8.615850e-47 |
| Msa0558780 | Msa1078760 | 0.825991 | 3.465592e-54 | -8.615850e-47 |
| Msa0558780 | Msa1081520 | 0.820255 | 7.556715e-53 | -8.615850e-47 |
| Msa0558780 | Msa1084210 | 0.827327 | 1.663623e-54 | -8.615850e-47 |
| Msa0558780 | Msa1088000 | 0.829883 | 4.012222e-55 | -8.615850e-47 |
| Msa0558780 | Msa1088400 | 0.824907 | 6.257463e-54 | -8.615850e-47 |
| Msa0558780 | Msa1090020 | 0.804656 | 1.945414e-49 | -8.615850e-47 |
| Msa0558780 | Msa1102410 | 0.804214 | 2.405685e-49 | -8.615850e-47 |
| Msa0558780 | Msa1104020 | 0.803161 | 3.978631e-49 | -8.615850e-47 |
| Msa0558780 | Msa1112210 | 0.817057 | 4.016780e-52 | -8.615850e-47 |
| Msa0558780 | Msa1117770 | 0.836078 | 1.155219e-56 | -8.615850e-47 |
| Msa0558780 | Msa1119420 | 0.809545 | 1.794724e-50 | -8.615850e-47 |
| Msa0558780 | Msa1121720 | 0.834266 | 3.309871e-56 | -8.615850e-47 |
| Msa0558780 | Msa1123440 | 0.831201 | 1.909303e-55 | -8.615850e-47 |
| Msa0558780 | Msa1128230 | 0.826165 | 3.151064e-54 | -8.615850e-47 |
| Msa0558780 | Msa1129120 | 0.816038 | 6.793567e-52 | -8.615850e-47 |
| Msa0558780 | Msa1130910 | 0.803589 | 3.243594e-49 | -8.615850e-47 |
| Msa0558780 | Msa1132880 | 0.829613 | 4.667901e-55 | -8.615850e-47 |
| Msa0558780 | Msa1134420 | 0.853972 | 1.677315e-61 | -8.615850e-47 |
| Msa0558780 | Msa1134430 | 0.825337 | 4.951718e-54 | -8.615850e-47 |
| Msa0558780 | Msa1144380 | 0.810922 | 9.057643e-51 | -8.615850e-47 |
| Msa0558780 | Msa1156120 | 0.803275 | 3.768307e-49 | -8.615850e-47 |
| Msa0558780 | Msa1158180 | 0.804773 | 1.838614e-49 | -8.615850e-47 |
| Msa0558780 | Msa1161550 | 0.803694 | 3.084654e-49 | -8.615850e-47 |
| Msa0558780 | Msa1166470 | 0.802521 | 5.394537e-49 | -8.615850e-47 |
| Msa0558780 | Msa1169590 | 0.817867 | 2.638428e-52 | -8.615850e-47 |
| Msa0558780 | Msa1171640 | 0.807311 | 5.378805e-50 | -8.615850e-47 |
| Msa0558780 | Msa1181370 | 0.824626 | 7.288088e-54 | -8.615850e-47 |
| Msa0558780 | Msa1184100 | 0.804624 | 1.975958e-49 | -8.615850e-47 |
| Msa0558780 | Msa1191530 | 0.810346 | 1.206346e-50 | -8.615850e-47 |
| Msa0558780 | Msa1194480 | 0.804351 | 2.252319e-49 | -8.615850e-47 |
| Msa0558780 | Msa1199540 | 0.832955 | 7.034001e-56 | -8.615850e-47 |
| Msa0558780 | Msa1209990 | 0.818527 | 1.871592e-52 | -8.615850e-47 |
| Msa0558780 | Msa1212150 | 0.814061 | 1.865891e-51 | -8.615850e-47 |
| Msa0558780 | Msa1212210 | 0.816050 | 6.752390e-52 | -8.615850e-47 |
| Msa0558780 | Msa1213470 | 0.810516 | 1.108805e-50 | -8.615850e-47 |
| Msa0558780 | Msa1225240 | 0.800401 | 1.466253e-48 | -8.615850e-47 |
| Msa0558780 | Msa1228600 | 0.810856 | 9.361150e-51 | -8.615850e-47 |
| Msa0558780 | Msa1236120 | 0.820221 | 7.691598e-53 | -8.615850e-47 |
| Msa0558780 | Msa1236190 | 0.834972 | 2.199313e-56 | -8.615850e-47 |
| Msa0558780 | Msa1244430 | 0.800811 | 1.209736e-48 | -8.615850e-47 |
| Msa0558780 | Msa1247200 | 0.805490 | 1.301710e-49 | -8.615850e-47 |
| Msa0558780 | Msa1260520 | 0.823487 | 1.348902e-53 | -8.615850e-47 |
| Msa0558780 | Msa1260640 | 0.834415 | 3.037525e-56 | -8.615850e-47 |
| Msa0558780 | Msa1266120 | 0.809708 | 1.655592e-50 | -8.615850e-47 |
| Msa0558780 | Msa1266750 | 0.804666 | 1.936530e-49 | -8.615850e-47 |
| Msa0558780 | Msa1273620 | 0.820372 | 7.101277e-53 | -8.615850e-47 |
| Msa0558780 | Msa1277270 | 0.822871 | 1.878138e-53 | -8.615850e-47 |
| Msa0558780 | Msa1279200 | 0.827617 | 1.416953e-54 | -8.615850e-47 |
| Msa0558780 | Msa1279250 | 0.832944 | 7.079792e-56 | -8.615850e-47 |
| Msa0558780 | Msa1291070 | 0.806147 | 9.473452e-50 | -8.615850e-47 |
| Msa0558780 | Msa1298480 | 0.818465 | 1.932890e-52 | -8.615850e-47 |
| Msa0558780 | Msa1300370 | 0.813386 | 2.627412e-51 | -8.615850e-47 |
| Msa0558780 | Msa1305970 | 0.832474 | 9.262492e-56 | -8.615850e-47 |
| Msa0558780 | Msa1315880 | 0.813358 | 2.665352e-51 | -8.615850e-47 |
| Msa0558780 | Msa1326780 | 0.803854 | 2.857551e-49 | -8.615850e-47 |
| Msa0558780 | Msa1328680 | 0.815329 | 9.773852e-52 | -8.615850e-47 |
| Msa0558780 | Msa1331720 | 0.804503 | 2.094103e-49 | -8.615850e-47 |
| Msa0558780 | Msa1341710 | 0.815550 | 8.729812e-52 | -8.615850e-47 |
| Msa0558780 | Msa1342360 | 0.817120 | 3.888216e-52 | -8.615850e-47 |
| Msa0558780 | Msa1342460 | 0.825803 | 3.841226e-54 | -8.615850e-47 |
| Msa0558780 | Msa1348180 | 0.803290 | 3.740129e-49 | -8.615850e-47 |
| Msa0558780 | Msa1356100 | 0.832723 | 8.031083e-56 | -8.615850e-47 |
| Msa0558780 | Msa1360070 | 0.809896 | 1.508656e-50 | -8.615850e-47 |
| Msa0558780 | Msa1361580 | 0.802828 | 4.660890e-49 | -8.615850e-47 |
| Msa0558780 | Msa1363310 | 0.839364 | 1.656269e-57 | -8.615850e-47 |
| Msa0558780 | Msa1367690 | 0.819470 | 1.141812e-52 | -8.615850e-47 |
| Msa0558780 | Msa1373310 | 0.814858 | 1.243498e-51 | -8.615850e-47 |
| Msa0558780 | Msa1373420 | 0.812132 | 4.944684e-51 | -8.615850e-47 |
| Msa0558780 | Msa1375980 | 0.807200 | 5.677663e-50 | -8.615850e-47 |
| Msa0558780 | Msa1377980 | 0.846467 | 2.132347e-59 | -8.615850e-47 |
| Msa0558780 | Msa1382100 | 0.821877 | 3.196225e-53 | -8.615850e-47 |
| Msa0558780 | Msa1384410 | 0.832528 | 8.978495e-56 | -8.615850e-47 |
| Msa0558780 | Msa1386580 | 0.840001 | 1.131086e-57 | -8.615850e-47 |
| Msa0558780 | Msa1386910 | 0.812316 | 4.506880e-51 | -8.615850e-47 |
| Msa0558780 | Msa1388720 | 0.816171 | 6.344610e-52 | -8.615850e-47 |
| Msa0558780 | Msa1389670 | 0.841931 | 3.522718e-58 | -8.615850e-47 |
| Msa0558780 | Msa1395380 | 0.811167 | 8.015601e-51 | -8.615850e-47 |
| Msa0558780 | Msa1397560 | 0.810039 | 1.405445e-50 | -8.615850e-47 |
| Msa0558780 | Msa1398450 | 0.801518 | 8.668740e-49 | -8.615850e-47 |
| Msa0558780 | Msa1408230 | 0.814195 | 1.743727e-51 | -8.615850e-47 |
| Msa0558780 | Msa1408280 | 0.844091 | 9.371344e-59 | -8.615850e-47 |
| Msa0558780 | Msa1408860 | 0.827825 | 1.263198e-54 | -8.615850e-47 |
| Msa0558780 | Msa1410480 | 0.822081 | 2.866643e-53 | -8.615850e-47 |
| Msa0558780 | Msa1410500 | 0.823835 | 1.118028e-53 | -8.615850e-47 |
| Msa0558780 | Msa1414780 | 0.811520 | 6.718169e-51 | -8.615850e-47 |
| Msa0558780 | Msa1415510 | 0.803244 | 3.824146e-49 | -8.615850e-47 |
| Msa0558780 | Msa1421520 | 0.805070 | 1.594342e-49 | -8.615850e-47 |
| Msa0558780 | Msa1423560 | 0.802184 | 6.329205e-49 | -8.615850e-47 |
| Msa0558780 | Msa1424490 | 0.806300 | 8.794068e-50 | -8.615850e-47 |
| Msa0558780 | Msa1432100 | 0.809125 | 2.208601e-50 | -8.615850e-47 |
| Msa0558780 | Msa1432730 | 0.825665 | 4.140749e-54 | -8.615850e-47 |
| Msa0558780 | Msa1440140 | 0.801520 | 8.662036e-49 | -8.615850e-47 |
| Msa0558780 | Msa1444130 | 0.824087 | 9.761512e-54 | -8.615850e-47 |
| Msa0558780 | Msa1444690 | 0.819913 | 9.048046e-53 | -8.615850e-47 |
| Msa0558780 | Msa1451200 | 0.800762 | 1.237777e-48 | -8.615850e-47 |
| Msa0558780 | Msa1454300 | 0.814090 | 1.839219e-51 | -8.615850e-47 |
| Msa0558780 | Msa1459130 | 0.839457 | 1.566495e-57 | -8.615850e-47 |
| Msa0558780 | Msa1459680 | 0.829114 | 6.167719e-55 | -8.615850e-47 |
| Msa0558780 | Msa1461840 | 0.805690 | 1.181726e-49 | -8.615850e-47 |
| Msa0558780 | Msa1462210 | 0.802732 | 4.879336e-49 | -8.615850e-47 |
| Msa0558780 | Msa1464470 | 0.811293 | 7.527906e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558780 | MtrunA17_Chr8g0384361 | 100.000 | 238 | 0 | 0 | 187 | 424 | 1 | 238 | 5.03e-178 | 496 |
| Msa0558780 | MtrunA17_Chr8g0384371 | 92.265 | 181 | 10 | 1 | 1 | 181 | 1 | 177 | 4.79e-116 | 337 |
| Msa0558780 | MtrunA17_Chr4g0061411 | 32.203 | 354 | 212 | 8 | 49 | 393 | 10 | 344 | 2.20e-49 | 177 |
| Msa0558780 | MtrunA17_Chr4g0062751 | 36.491 | 285 | 160 | 8 | 119 | 399 | 251 | 518 | 9.36e-43 | 158 |
| Msa0558780 | MtrunA17_Chr2g0321941 | 31.746 | 315 | 192 | 6 | 79 | 388 | 48 | 344 | 1.70e-42 | 154 |
| Msa0558780 | MtrunA17_Chr5g0393401 | 28.261 | 230 | 147 | 5 | 118 | 340 | 71 | 289 | 8.09e-19 | 88.6 |
| Msa0558780 | MtrunA17_Chr3g0146071 | 28.571 | 231 | 147 | 6 | 117 | 340 | 67 | 286 | 8.41e-19 | 88.6 |
| Msa0558780 | MtrunA17_Chr3g0117101 | 25.685 | 292 | 183 | 7 | 65 | 341 | 282 | 554 | 1.25e-18 | 88.6 |
| Msa0558780 | MtrunA17_Chr4g0027021 | 29.677 | 155 | 105 | 2 | 202 | 354 | 136 | 288 | 5.58e-16 | 79.3 |
| Msa0558780 | MtrunA17_Chr1g0151631 | 26.354 | 277 | 173 | 11 | 118 | 387 | 83 | 335 | 3.86e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558780 | AT4G33470.1 | 71.537 | 397 | 107 | 1 | 34 | 424 | 27 | 423 | 0.0 | 601 |
| Msa0558780 | AT5G61060.1 | 32.394 | 355 | 210 | 10 | 79 | 422 | 44 | 379 | 9.41e-49 | 176 |
| Msa0558780 | AT5G61060.2 | 32.113 | 355 | 215 | 9 | 79 | 422 | 44 | 383 | 1.16e-48 | 176 |
| Msa0558780 | AT5G61070.1 | 35.636 | 275 | 156 | 8 | 157 | 422 | 150 | 412 | 2.11e-45 | 167 |
| Msa0558780 | AT3G18520.4 | 45.588 | 204 | 102 | 5 | 192 | 391 | 266 | 464 | 2.60e-45 | 164 |
| Msa0558780 | AT3G18520.1 | 45.588 | 204 | 102 | 5 | 192 | 391 | 266 | 464 | 2.78e-45 | 165 |
| Msa0558780 | AT1G08460.1 | 29.745 | 353 | 219 | 8 | 79 | 423 | 37 | 368 | 4.02e-45 | 160 |
| Msa0558780 | AT3G18520.2 | 45.588 | 204 | 102 | 5 | 192 | 391 | 266 | 464 | 4.74e-45 | 164 |
| Msa0558780 | AT3G18520.3 | 45.503 | 189 | 94 | 5 | 192 | 376 | 266 | 449 | 3.01e-39 | 147 |
| Msa0558780 | AT1G08460.2 | 32.296 | 257 | 147 | 7 | 79 | 327 | 37 | 274 | 8.48e-35 | 132 |
| Msa0558780 | AT4G38130.2 | 28.261 | 230 | 149 | 5 | 117 | 340 | 66 | 285 | 4.87e-18 | 86.3 |
| Msa0558780 | AT5G63110.1 | 34.043 | 141 | 90 | 2 | 202 | 341 | 152 | 290 | 7.82e-18 | 85.9 |
| Msa0558780 | AT4G38130.1 | 28.261 | 230 | 149 | 5 | 117 | 340 | 66 | 285 | 9.41e-18 | 85.9 |
| Msa0558780 | AT3G44680.1 | 28.241 | 216 | 140 | 6 | 202 | 412 | 136 | 341 | 2.02e-16 | 81.3 |
| Msa0558780 | AT5G35600.1 | 25.514 | 243 | 155 | 7 | 110 | 340 | 52 | 280 | 2.38e-13 | 71.6 |
Find 129 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTCTTCATACAAAATATT+TGG | 0.067233 | 4_1:-57795871 | None:intergenic |
| CATGCAAGAGCCTATGTTTC+TGG | 0.144607 | 4_1:+57792255 | Msa0558780:CDS |
| TTCTGGATAATCAATAATTA+AGG | 0.146848 | 4_1:-57791071 | None:intergenic |
| CAAGGGATTTACTTGCTTAA+TGG | 0.182162 | 4_1:-57795990 | None:intergenic |
| ACTTGTTTACATGATGATTA+AGG | 0.248181 | 4_1:-57791304 | None:intergenic |
| GACATCATTCTTGTTTCTGC+TGG | 0.267199 | 4_1:+57795421 | Msa0558780:CDS |
| TTATTCAGTTGCTCCATCTA+TGG | 0.271819 | 4_1:+57791430 | Msa0558780:CDS |
| CTTCCTCTTCCTGGAGGTTC+AGG | 0.276489 | 4_1:+57795334 | Msa0558780:CDS |
| GACACATTTCGTGCTCTTCT+TGG | 0.276981 | 4_1:+57795817 | Msa0558780:CDS |
| CAAAAGTGAAGTTCTTATTC+AGG | 0.290303 | 4_1:-57796139 | None:intergenic |
| ACACATTTCGTGCTCTTCTT+GGG | 0.305035 | 4_1:+57795818 | Msa0558780:CDS |
| AATCATGGTGCAGACCTTTC+AGG | 0.312463 | 4_1:+57793096 | Msa0558780:intron |
| CAGAAGCCCATAGGTCCTTT+TGG | 0.312668 | 4_1:-57793913 | None:intergenic |
| GGAACTCTAAAATGTGATTC+TGG | 0.327663 | 4_1:-57791562 | None:intergenic |
| ACATTAAATCTTCCTCTTCC+TGG | 0.333702 | 4_1:+57795325 | Msa0558780:CDS |
| CTTATTGTCGTTGATGGTTC+GGG | 0.337854 | 4_1:+57792958 | Msa0558780:CDS |
| ATCCAGAAAGAAAATTTGTT+TGG | 0.347787 | 4_1:+57791086 | Msa0558780:five_prime_UTR |
| CGTCATGCTCAGCGTGTTCA+TGG | 0.349689 | 4_1:+57793964 | Msa0558780:CDS |
| ACTTATTGTCGTTGATGGTT+CGG | 0.352826 | 4_1:+57792957 | Msa0558780:CDS |
| GCTCTTCATACAAAATATTT+GGG | 0.352989 | 4_1:-57795870 | None:intergenic |
| ACCTGATTGTGGCCCATAGA+TGG | 0.365380 | 4_1:-57791443 | None:intergenic |
| TCCATCTATGGGCCACAATC+AGG | 0.365718 | 4_1:+57791442 | Msa0558780:CDS |
| GAGAGCGAGGAAGGTAGGAG+GGG | 0.377260 | 4_1:-57791153 | None:intergenic |
| TGGAGGGCAGTGAGAATTGC+AGG | 0.379250 | 4_1:-57791583 | None:intergenic |
| AAAGGTGTGAAGAAATGTTT+AGG | 0.380313 | 4_1:+57791344 | Msa0558780:CDS |
| AAATTTGATGAGGTGGGTGC+TGG | 0.381934 | 4_1:+57795286 | Msa0558780:CDS |
| AAGGGACTTATTGTCGTTGA+TGG | 0.384109 | 4_1:+57792952 | Msa0558780:CDS |
| GGAGAGCGAGGAAGGTAGGA+GGG | 0.384362 | 4_1:-57791154 | None:intergenic |
| CGCCATTCCAAAAGGACCTA+TGG | 0.385432 | 4_1:+57793906 | Msa0558780:CDS |
| TGGAAGAATCAGAGAAATAA+AGG | 0.387450 | 4_1:+57791326 | Msa0558780:CDS |
| TCTGGATAATCAATAATTAA+GGG | 0.392844 | 4_1:-57791070 | None:intergenic |
| AAGAAGGAGGAGAGCGAGGA+AGG | 0.396407 | 4_1:-57791162 | None:intergenic |
| TTGAAGTGAGCTTCATTTGT+TGG | 0.400600 | 4_1:-57791603 | None:intergenic |
| ATGCAAGAGCCTATGTTTCT+GGG | 0.402764 | 4_1:+57792256 | Msa0558780:CDS |
| AGGAGGAGAGCGAGGAAGGT+AGG | 0.403116 | 4_1:-57791158 | None:intergenic |
| GATGAGGTGGGTGCTGGGGA+TGG | 0.407309 | 4_1:+57795292 | Msa0558780:CDS |
| AGGAGAGCGAGGAAGGTAGG+AGG | 0.408299 | 4_1:-57791155 | None:intergenic |
| ACAGGTTATGGATCAAGCTT+TGG | 0.409172 | 4_1:+57792927 | Msa0558780:intron |
| ACCCACCTCATCAAATTTGC+CGG | 0.409422 | 4_1:-57795281 | None:intergenic |
| GTTGAGACGACCCTGGATAA+TGG | 0.409889 | 4_1:-57795968 | None:intergenic |
| TCATCAAATTTGCCGGTACC+TGG | 0.425503 | 4_1:-57795274 | None:intergenic |
| TAAGCAAGTAAATCCCTTGA+TGG | 0.427506 | 4_1:+57795994 | Msa0558780:three_prime_UTR |
| GAAGAAGAAGGAGGAGAGCG+AGG | 0.438696 | 4_1:-57791166 | None:intergenic |
| GCTAATCTTCAATTAACAAC+GGG | 0.447179 | 4_1:+57795676 | Msa0558780:CDS |
| AAGGTAGGAGGGGAGGTGCA+TGG | 0.447265 | 4_1:-57791143 | None:intergenic |
| TGATGATTAAGGATAAAGAT+TGG | 0.449045 | 4_1:-57791293 | None:intergenic |
| ATCAAAACATGCCATTATCC+AGG | 0.450276 | 4_1:+57795957 | Msa0558780:three_prime_UTR |
| TTTGGAATGGCGTGATGTCC+TGG | 0.452922 | 4_1:-57793895 | None:intergenic |
| CTATGTTTCTGGGCTTGAAA+AGG | 0.464599 | 4_1:+57792266 | Msa0558780:CDS |
| ACATCATTCTTGTTTCTGCT+GGG | 0.466289 | 4_1:+57795422 | Msa0558780:CDS |
| TCTTCTTCCTTCTCCTCATA+CGG | 0.467635 | 4_1:+57791181 | Msa0558780:CDS |
| AATTTGATGAGGTGGGTGCT+GGG | 0.470063 | 4_1:+57795287 | Msa0558780:CDS |
| AAAAGTGAAGTTCTTATTCA+GGG | 0.471591 | 4_1:-57796138 | None:intergenic |
| TATTCAGTTGCTCCATCTAT+GGG | 0.475551 | 4_1:+57791431 | Msa0558780:CDS |
| TCAATAGTAGCAGCTGGTGC+TGG | 0.476526 | 4_1:+57793121 | Msa0558780:CDS |
| TTTGATGTTCACCACGGGAA+TGG | 0.481143 | 4_1:+57794012 | Msa0558780:CDS |
| GCTCAGGATGGAAGCTATCC+AGG | 0.481149 | 4_1:+57795256 | Msa0558780:intron |
| ATGACTCAATAGCTGAATAG+AGG | 0.483825 | 4_1:-57791396 | None:intergenic |
| AGCTTACTTGATGGAAGGAA+AGG | 0.484055 | 4_1:-57794074 | None:intergenic |
| CACATTTCGTGCTCTTCTTG+GGG | 0.488682 | 4_1:+57795819 | Msa0558780:CDS |
| ATTTCGTTTGTCAGGTATGA+TGG | 0.492454 | 4_1:+57795634 | Msa0558780:intron |
| AACTAGCAAAAGACTTATGT+GGG | 0.492815 | 4_1:+57795731 | Msa0558780:CDS |
| CAACTAGCAAAAGACTTATG+TGG | 0.495347 | 4_1:+57795730 | Msa0558780:CDS |
| CTGAGCATGACGAGCTGCAA+TGG | 0.497183 | 4_1:-57793953 | None:intergenic |
| TCTTCTTGGGGACAAAAGCT+TGG | 0.502408 | 4_1:+57795831 | Msa0558780:CDS |
| CCCACTTGTCCCATAAAAGA+AGG | 0.502524 | 4_1:+57796088 | Msa0558780:three_prime_UTR |
| GAGAGAGAGAGTACCGTATG+AGG | 0.506612 | 4_1:-57791194 | None:intergenic |
| TTCAGCTATTGAGTCATGCT+CGG | 0.507714 | 4_1:+57791402 | Msa0558780:CDS |
| TACCGGCAAATTTGATGAGG+TGG | 0.518143 | 4_1:+57795279 | Msa0558780:CDS |
| AGCGAGGAAGGTAGGAGGGG+AGG | 0.521835 | 4_1:-57791150 | None:intergenic |
| GTGGGTGCTGGGGATGGTGA+AGG | 0.527108 | 4_1:+57795298 | Msa0558780:CDS |
| GAGAGTACCGTATGAGGAGA+AGG | 0.528103 | 4_1:-57791188 | None:intergenic |
| ACAGGTTGATAATGCCATCA+AGG | 0.528350 | 4_1:-57796008 | None:intergenic |
| GGACATCACGCCATTCCAAA+AGG | 0.528420 | 4_1:+57793898 | Msa0558780:CDS |
| CTTATAGCTTACTTGATGGA+AGG | 0.536704 | 4_1:-57794079 | None:intergenic |
| GTTAATTGAAGATTAGCTAG+TGG | 0.538185 | 4_1:-57795670 | None:intergenic |
| GTTTGGCGCTGCTGCTGCTG+CGG | 0.539309 | 4_1:+57791103 | Msa0558780:five_prime_UTR |
| CTTAATGGTTGAGACGACCC+TGG | 0.539459 | 4_1:-57795975 | None:intergenic |
| GCAGTATCACCTGAACCTCC+AGG | 0.541210 | 4_1:-57795343 | None:intergenic |
| ATGGATCAAGCTTTGGAGAA+GGG | 0.542742 | 4_1:+57792934 | Msa0558780:CDS |
| ACAAATGAAGCTCACTTCAA+AGG | 0.545527 | 4_1:+57791606 | Msa0558780:CDS |
| TCACCTGAACCTCCAGGAAG+AGG | 0.547363 | 4_1:-57795337 | None:intergenic |
| GCCATTCCAAAAGGACCTAT+GGG | 0.549537 | 4_1:+57793907 | Msa0558780:CDS |
| TTGTGCTCAAAGATTTAAGC+CGG | 0.553693 | 4_1:+57795399 | Msa0558780:CDS |
| CAGGAGTCAATAGTAGCAGC+TGG | 0.555060 | 4_1:+57793115 | Msa0558780:CDS |
| GAGGAGAAGGAAGAAGAAGG+AGG | 0.556724 | 4_1:-57791175 | None:intergenic |
| TTAATCATCATGTAAACAAG+TGG | 0.557141 | 4_1:+57791306 | Msa0558780:CDS |
| GCAGAAACAAGAATGATGTC+CGG | 0.559247 | 4_1:-57795418 | None:intergenic |
| GATGGAAGCTATCCAGGTAC+CGG | 0.560974 | 4_1:+57795262 | Msa0558780:CDS |
| GCAATGTCATCGGTAGAAGC+AGG | 0.562346 | 4_1:-57792225 | None:intergenic |
| GATCACCACTGAGTCAACTA+AGG | 0.563005 | 4_1:-57793149 | None:intergenic |
| CAAGTCTCTTTCATATTCAG+TGG | 0.567575 | 4_1:+57795792 | Msa0558780:CDS |
| AGCTAATCTTCAATTAACAA+CGG | 0.571327 | 4_1:+57795675 | Msa0558780:CDS |
| GGCTTAAATCTTTGAGCACA+AGG | 0.573135 | 4_1:-57795397 | None:intergenic |
| TATGGATCAAGCTTTGGAGA+AGG | 0.575070 | 4_1:+57792933 | Msa0558780:CDS |
| AAGTGAGCTTCATTTGTTGG+AGG | 0.580694 | 4_1:-57791600 | None:intergenic |
| ATTTGATGAGGTGGGTGCTG+GGG | 0.581878 | 4_1:+57795288 | Msa0558780:CDS |
| TATGAGGAGAAGGAAGAAGA+AGG | 0.588664 | 4_1:-57791178 | None:intergenic |
| AGTGAGCTTCATTTGTTGGA+GGG | 0.589485 | 4_1:-57791599 | None:intergenic |
| TCGACTTTGATGTTCACCAC+GGG | 0.590785 | 4_1:+57794007 | Msa0558780:CDS |
| CATCATTTGTTCCATTCCCG+TGG | 0.594263 | 4_1:-57794023 | None:intergenic |
| TTATGCATGATTCAGTTCCG+TGG | 0.595575 | 4_1:+57792171 | Msa0558780:intron |
| TGACTCAATAGCTGAATAGA+GGG | 0.601357 | 4_1:-57791395 | None:intergenic |
| CAGGTTGATAATGCCATCAA+GGG | 0.608726 | 4_1:-57796007 | None:intergenic |
| TTAAATCTTCCTCTTCCTGG+AGG | 0.612077 | 4_1:+57795328 | Msa0558780:CDS |
| TGCTACTATTGACTCCTGAA+AGG | 0.616068 | 4_1:-57793110 | None:intergenic |
| TCAAAACATGCCATTATCCA+GGG | 0.616704 | 4_1:+57795958 | Msa0558780:three_prime_UTR |
| ACCACAGCAATCTTGCACGA+TGG | 0.617721 | 4_1:-57796115 | None:intergenic |
| CTTATCAATGCAAAACCAGT+GGG | 0.618120 | 4_1:-57793868 | None:intergenic |
| ACCGGCAAATTTGATGAGGT+GGG | 0.619088 | 4_1:+57795280 | Msa0558780:CDS |
| ATCAATGCAAAACCAGTGGG+TGG | 0.619217 | 4_1:-57793865 | None:intergenic |
| ATGCACACTTGCAATGTCAT+CGG | 0.619609 | 4_1:-57792235 | None:intergenic |
| ACAGTGGAAGTAGCATATGT+TGG | 0.624738 | 4_1:-57792982 | None:intergenic |
| GATTCAGTTCCGTGGCTCTG+AGG | 0.633784 | 4_1:+57792179 | Msa0558780:intron |
| ATAATGAAAGATCCACCCAC+TGG | 0.638098 | 4_1:+57793853 | Msa0558780:CDS |
| AGATTAAGCAAGCTATTCAG+AGG | 0.639466 | 4_1:+57795902 | Msa0558780:CDS |
| GTTCAACGACCTCAGAGCCA+CGG | 0.650360 | 4_1:-57792188 | None:intergenic |
| AGGAAGAGGAAGATTTAATG+TGG | 0.653031 | 4_1:-57795323 | None:intergenic |
| TCTTATCAATGCAAAACCAG+TGG | 0.657521 | 4_1:-57793869 | None:intergenic |
| TTTGCATTGATAAGACCACC+AGG | 0.661033 | 4_1:+57793877 | Msa0558780:CDS |
| AGGTACCGGCAAATTTGATG+AGG | 0.666762 | 4_1:+57795276 | Msa0558780:CDS |
| ATCGACTTTGATGTTCACCA+CGG | 0.667897 | 4_1:+57794006 | Msa0558780:CDS |
| TCCATCGTGCAAGATTGCTG+TGG | 0.684973 | 4_1:+57796114 | Msa0558780:three_prime_UTR |
| ATTAGCCTTAGTTGACTCAG+TGG | 0.692844 | 4_1:+57793144 | Msa0558780:CDS |
| CTAGCAAAAGACTTATGTGG+GGG | 0.704013 | 4_1:+57795733 | Msa0558780:CDS |
| ACTAGCAAAAGACTTATGTG+GGG | 0.708262 | 4_1:+57795732 | Msa0558780:CDS |
| GGAATGGCGTGATGTCCTGG+TGG | 0.728966 | 4_1:-57793892 | None:intergenic |
| TAGCTAGTGGATCTAACACG+TGG | 0.729738 | 4_1:-57795657 | None:intergenic |
| ATTGTGCAGAAACCTGATTG+TGG | 0.764552 | 4_1:-57791454 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATATAGTAGTAATA+AGG | - | chr4_1:57794748-57794767 | None:intergenic | 10.0% |
| !! | ATTTAATAACTTCAATTTAA+TGG | + | chr4_1:57795234-57795253 | Msa0558780:intron | 10.0% |
| !! | TTAAAATTAACGAAAGAAAA+TGG | - | chr4_1:57791983-57792002 | None:intergenic | 15.0% |
| !! | TAGAAAATACAATTATTCTA+TGG | + | chr4_1:57793031-57793050 | Msa0558780:intron | 15.0% |
| !!! | TGATAATCTATGTTTTATTT+TGG | + | chr4_1:57793199-57793218 | Msa0558780:intron | 15.0% |
| !!! | GATAATCTATGTTTTATTTT+GGG | + | chr4_1:57793200-57793219 | Msa0558780:intron | 15.0% |
| !!! | ATAATCTATGTTTTATTTTG+GGG | + | chr4_1:57793201-57793220 | Msa0558780:intron | 15.0% |
| !! | TTTATATCTCTTAAGAAATT+TGG | - | chr4_1:57793681-57793700 | None:intergenic | 15.0% |
| !! | AAATTGAAAGAAAAAAAACA+TGG | - | chr4_1:57794377-57794396 | None:intergenic | 15.0% |
| !! | TCTGGATAATCAATAATTAA+GGG | - | chr4_1:57791073-57791092 | None:intergenic | 20.0% |
| !! | TTCTGGATAATCAATAATTA+AGG | - | chr4_1:57791074-57791093 | None:intergenic | 20.0% |
| !!! | AAAATTAGGTATTGAAGTTA+TGG | - | chr4_1:57791481-57791500 | None:intergenic | 20.0% |
| !! | GAGTTTAATAATACTTTGTT+TGG | + | chr4_1:57791731-57791750 | Msa0558780:intron | 20.0% |
| !!! | TAATAATACTTTGTTTGGAA+AGG | + | chr4_1:57791736-57791755 | Msa0558780:intron | 20.0% |
| !! | AAATAACTTATGTTTGAACT+GGG | - | chr4_1:57791941-57791960 | None:intergenic | 20.0% |
| !! | AAAATAACTTATGTTTGAAC+TGG | - | chr4_1:57791942-57791961 | None:intergenic | 20.0% |
| !! | GATTTGTATTTCAAACAAAT+AGG | - | chr4_1:57792012-57792031 | None:intergenic | 20.0% |
| !! | AAATACAAATCAACTTCAAT+GGG | + | chr4_1:57792021-57792040 | Msa0558780:intron | 20.0% |
| !! | TAAATAATGTCATCAAAGTA+TGG | - | chr4_1:57792103-57792122 | None:intergenic | 20.0% |
| !! | TGATGACATTATTTAGTAAT+TGG | + | chr4_1:57792108-57792127 | Msa0558780:intron | 20.0% |
| !!! | AGGTTTTGTATTCTAAATTA+TGG | + | chr4_1:57792335-57792354 | Msa0558780:intron | 20.0% |
| !!! | AAAACATAGTTGATATAGAT+TGG | - | chr4_1:57792624-57792643 | None:intergenic | 20.0% |
| !! | AGAATAAATTAGTCAAAACA+TGG | - | chr4_1:57792757-57792776 | None:intergenic | 20.0% |
| !! | TATTCTATGGAAATTCATAA+TGG | + | chr4_1:57793044-57793063 | Msa0558780:intron | 20.0% |
| !!! | AATTTAATTCTGGAAAATAG+GGG | - | chr4_1:57793591-57793610 | None:intergenic | 20.0% |
| !!! | CAATTTAATTCTGGAAAATA+GGG | - | chr4_1:57793592-57793611 | None:intergenic | 20.0% |
| !!! | ACAATTTAATTCTGGAAAAT+AGG | - | chr4_1:57793593-57793612 | None:intergenic | 20.0% |
| !! | GCTAAAATACAATTTAATTC+TGG | - | chr4_1:57793601-57793620 | None:intergenic | 20.0% |
| !! | TAAATGTTTCAAGAATTGTA+TGG | + | chr4_1:57793758-57793777 | Msa0558780:intron | 20.0% |
| !!! | TATTTTCTTGTTTTCCTTAT+TGG | + | chr4_1:57794122-57794141 | Msa0558780:intron | 20.0% |
| !! | AAAATGAAAAAGAAATATCC+TGG | + | chr4_1:57794182-57794201 | Msa0558780:intron | 20.0% |
| !! | AAATGAAAAAGAAATATCCT+GGG | + | chr4_1:57794183-57794202 | Msa0558780:intron | 20.0% |
| !! | TGAATATGTAAATGAGAAAT+AGG | + | chr4_1:57794547-57794566 | Msa0558780:intron | 20.0% |
| !! | AAATATAGTAGTAATAAGGA+TGG | - | chr4_1:57794744-57794763 | None:intergenic | 20.0% |
| !! | TACAAAATAATAGTATAAGC+AGG | + | chr4_1:57795050-57795069 | Msa0558780:intron | 20.0% |
| !!! | TTTGATTTGATTTTTCATTC+AGG | + | chr4_1:57795556-57795575 | Msa0558780:intron | 20.0% |
| !! | ATCCAGAAAGAAAATTTGTT+TGG | + | chr4_1:57791086-57791105 | Msa0558780:five_prime_UTR | 25.0% |
| ! | TGATGATTAAGGATAAAGAT+TGG | - | chr4_1:57791296-57791315 | None:intergenic | 25.0% |
| ! | ACTTGTTTACATGATGATTA+AGG | - | chr4_1:57791307-57791326 | None:intergenic | 25.0% |
| ! | TTAATCATCATGTAAACAAG+TGG | + | chr4_1:57791306-57791325 | Msa0558780:CDS | 25.0% |
| ! | ATTGTGATTCTAACAATAAC+AGG | + | chr4_1:57791531-57791550 | Msa0558780:intron | 25.0% |
| ! | AGAGAAAATTAGATCATACA+AGG | - | chr4_1:57791773-57791792 | None:intergenic | 25.0% |
| ! | CTTCATATTCAATCTACTAT+CGG | + | chr4_1:57791833-57791852 | Msa0558780:intron | 25.0% |
| !!! | TAGTCTATTTAAGCTTTGTT+TGG | - | chr4_1:57791910-57791929 | None:intergenic | 25.0% |
| ! | AAGAAAATGGTGATATATTC+TGG | - | chr4_1:57791970-57791989 | None:intergenic | 25.0% |
| ! | GAAATACAAATCAACTTCAA+TGG | + | chr4_1:57792020-57792039 | Msa0558780:intron | 25.0% |
| !! | TAAAAGGAAGTATGAGATAA+AGG | - | chr4_1:57792445-57792464 | None:intergenic | 25.0% |
| ! | TTCTTTAACCAAGTAAGAAT+TGG | - | chr4_1:57792484-57792503 | None:intergenic | 25.0% |
| ! | TGCTCTTTCTATAAATTCTA+GGG | + | chr4_1:57792592-57792611 | Msa0558780:intron | 25.0% |
| ! | TGAAGTTTGAACAAAAAAGA+AGG | - | chr4_1:57792787-57792806 | None:intergenic | 25.0% |
| ! | AGAATAAAATAGTTTCCGAT+AGG | - | chr4_1:57793281-57793300 | None:intergenic | 25.0% |
| !! | GAAACTATTTTATTCTCTGT+TGG | + | chr4_1:57793285-57793304 | Msa0558780:intron | 25.0% |
| !! | TTTATTCTCTGTTGGAATTT+TGG | + | chr4_1:57793293-57793312 | Msa0558780:intron | 25.0% |
| !! | AAGCATTTTCAGTCAATATT+TGG | - | chr4_1:57793329-57793348 | None:intergenic | 25.0% |
| ! | CCATTTAAAGGTAAAAAGAA+AGG | - | chr4_1:57793366-57793385 | None:intergenic | 25.0% |
| !! | CCTTTCTTTTTACCTTTAAA+TGG | + | chr4_1:57793363-57793382 | Msa0558780:intron | 25.0% |
| !! | TCTTTTTACCTTTAAATGGT+TGG | + | chr4_1:57793367-57793386 | Msa0558780:intron | 25.0% |
| !! | CTTTTTACCTTTAAATGGTT+GGG | + | chr4_1:57793368-57793387 | Msa0558780:intron | 25.0% |
| !! | TTTTTACCTTTAAATGGTTG+GGG | + | chr4_1:57793369-57793388 | Msa0558780:intron | 25.0% |
| !!! | TAGCTTAAGTTTTAGAAACA+TGG | + | chr4_1:57793519-57793538 | Msa0558780:intron | 25.0% |
| !!! | AAGAGATATAAAAGTATTCC+AGG | + | chr4_1:57793689-57793708 | Msa0558780:intron | 25.0% |
| !!! | AGAGATATAAAAGTATTCCA+GGG | + | chr4_1:57793690-57793709 | Msa0558780:intron | 25.0% |
| ! | TTAAAGTTGAATCAAAGATC+GGG | - | chr4_1:57794460-57794479 | None:intergenic | 25.0% |
| ! | CTTAAAGTTGAATCAAAGAT+CGG | - | chr4_1:57794461-57794480 | None:intergenic | 25.0% |
| ! | TACATATGGTCCTAATTATT+CGG | + | chr4_1:57794786-57794805 | Msa0558780:intron | 25.0% |
| ! | GATTGGAGACATTAATATAT+TGG | - | chr4_1:57794944-57794963 | None:intergenic | 25.0% |
| !!! | GAAGTTCTGTTTTTTCAAAA+TGG | + | chr4_1:57795086-57795105 | Msa0558780:intron | 25.0% |
| ! | AGTGTGCTAATTATGAAAAA+AGG | + | chr4_1:57795179-57795198 | Msa0558780:intron | 25.0% |
| ! | CATAATTATCAAAGCAAAGA+TGG | + | chr4_1:57795462-57795481 | Msa0558780:intron | 25.0% |
| ! | TCCATATGTAAAAACAACAT+TGG | - | chr4_1:57795604-57795623 | None:intergenic | 25.0% |
| ! | AGCTAATCTTCAATTAACAA+CGG | + | chr4_1:57795675-57795694 | Msa0558780:CDS | 25.0% |
| !! | TTTTGCTAGTTGTTTAATAC+TGG | - | chr4_1:57795722-57795741 | None:intergenic | 25.0% |
| ! | GCTCTTCATACAAAATATTT+GGG | - | chr4_1:57795873-57795892 | None:intergenic | 25.0% |
| ! | AAAAGTGAAGTTCTTATTCA+GGG | - | chr4_1:57796141-57796160 | None:intergenic | 25.0% |
| TGGAAGAATCAGAGAAATAA+AGG | + | chr4_1:57791326-57791345 | Msa0558780:CDS | 30.0% | |
| ! | AAAGGTGTGAAGAAATGTTT+AGG | + | chr4_1:57791344-57791363 | Msa0558780:CDS | 30.0% |
| AGTTCAGTTCAGACAAAATT+AGG | - | chr4_1:57791495-57791514 | None:intergenic | 30.0% | |
| TTGAGTAAAATTAGTGGTTG+AGG | - | chr4_1:57791811-57791830 | None:intergenic | 30.0% | |
| !! | GAAGTGTTGAGTAAAATTAG+TGG | - | chr4_1:57791817-57791836 | None:intergenic | 30.0% |
| TTTAGACAGAATTACTCCAT+AGG | + | chr4_1:57792417-57792436 | Msa0558780:intron | 30.0% | |
| TAAGAATTGGACAGAAAAGT+GGG | - | chr4_1:57792471-57792490 | None:intergenic | 30.0% | |
| ! | TTTTCTGTCCAATTCTTACT+TGG | + | chr4_1:57792473-57792492 | Msa0558780:intron | 30.0% |
| AGAATTTATAGAAAGAGCAG+AGG | - | chr4_1:57792591-57792610 | None:intergenic | 30.0% | |
| CTGCTCTTTCTATAAATTCT+AGG | + | chr4_1:57792591-57792610 | Msa0558780:intron | 30.0% | |
| ! | TGTTCAGAAGTACACATTAT+AGG | - | chr4_1:57792649-57792668 | None:intergenic | 30.0% |
| ACAGTGATGATATAACATCA+AGG | + | chr4_1:57792720-57792739 | Msa0558780:intron | 30.0% | |
| ! | CAAATGATTTTACCATGACA+TGG | + | chr4_1:57792861-57792880 | Msa0558780:intron | 30.0% |
| !!! | ATCTATGTTTTATTTTGGGG+AGG | + | chr4_1:57793204-57793223 | Msa0558780:intron | 30.0% |
| !!! | TCTATGTTTTATTTTGGGGA+GGG | + | chr4_1:57793205-57793224 | Msa0558780:intron | 30.0% |
| ! | TTTTACCTTTAAATGGTTGG+GGG | + | chr4_1:57793370-57793389 | Msa0558780:intron | 30.0% |
| CTAAAACTTAAGCTAGAATG+TGG | - | chr4_1:57793514-57793533 | None:intergenic | 30.0% | |
| CAAGAATTGTATGGAACTAA+TGG | + | chr4_1:57793767-57793786 | Msa0558780:intron | 30.0% | |
| TCTTATTCGATTTCACATTC+AGG | + | chr4_1:57793816-57793835 | Msa0558780:intron | 30.0% | |
| CAAACTTATAGCTTACTTGA+TGG | - | chr4_1:57794086-57794105 | None:intergenic | 30.0% | |
| !!! | TGCTATTTCATTTTTGCGAA+TGG | - | chr4_1:57794160-57794179 | None:intergenic | 30.0% |
| AAAAAAAACATGGATGCCAT+GGG | - | chr4_1:57794367-57794386 | None:intergenic | 30.0% | |
| TAAAGTTGAATCAAAGATCG+GGG | - | chr4_1:57794459-57794478 | None:intergenic | 30.0% | |
| !! | AATAGTTTGCTGAAAGATCT+TGG | + | chr4_1:57794516-57794535 | Msa0558780:intron | 30.0% |
| AGGAAGATATTGAAGAACAA+AGG | + | chr4_1:57794567-57794586 | Msa0558780:intron | 30.0% | |
| ATATTGAAGAACAAAGGCTT+CGG | + | chr4_1:57794573-57794592 | Msa0558780:intron | 30.0% | |
| GATGCACTAACAAATACATA+TGG | + | chr4_1:57794772-57794791 | Msa0558780:intron | 30.0% | |
| ACATATGGTCCTAATTATTC+GGG | + | chr4_1:57794787-57794806 | Msa0558780:intron | 30.0% | |
| CTATTAGACATGTATATGTC+AGG | - | chr4_1:57794819-57794838 | None:intergenic | 30.0% | |
| CTGACATATACATGTCTAAT+AGG | + | chr4_1:57794817-57794836 | Msa0558780:intron | 30.0% | |
| ACATATACATGTCTAATAGG+CGG | + | chr4_1:57794820-57794839 | Msa0558780:intron | 30.0% | |
| TTTATAGTATGCTGATATGC+AGG | - | chr4_1:57794980-57794999 | None:intergenic | 30.0% | |
| TAACTTCAATTTAATGGCTC+AGG | + | chr4_1:57795240-57795259 | Msa0558780:intron | 30.0% | |
| AATTAAGTTTGTAACTGTGC+TGG | - | chr4_1:57795525-57795544 | None:intergenic | 30.0% | |
| !!! | GCCAATGTTGTTTTTACATA+TGG | + | chr4_1:57795600-57795619 | Msa0558780:intron | 30.0% |
| ! | GTTAATTGAAGATTAGCTAG+TGG | - | chr4_1:57795673-57795692 | None:intergenic | 30.0% |
| GCTAATCTTCAATTAACAAC+GGG | + | chr4_1:57795676-57795695 | Msa0558780:CDS | 30.0% | |
| AACTAGCAAAAGACTTATGT+GGG | + | chr4_1:57795731-57795750 | Msa0558780:CDS | 30.0% | |
| GGCTCTTCATACAAAATATT+TGG | - | chr4_1:57795874-57795893 | None:intergenic | 30.0% | |
| !!! | GCTTGCTTAATCTTTTTTGT+TGG | - | chr4_1:57795895-57795914 | None:intergenic | 30.0% |
| !! | TTTTGATTCTCAACATCACA+GGG | - | chr4_1:57795944-57795963 | None:intergenic | 30.0% |
| !! | AAGATTTTGATGCTAGATAC+AGG | - | chr4_1:57796029-57796048 | None:intergenic | 30.0% |
| CAAAAGTGAAGTTCTTATTC+AGG | - | chr4_1:57796142-57796161 | None:intergenic | 30.0% | |
| ! | CGCCAAACAAATTTTCTTTC+TGG | - | chr4_1:57791091-57791110 | None:intergenic | 35.0% |
| TGACTCAATAGCTGAATAGA+GGG | - | chr4_1:57791398-57791417 | None:intergenic | 35.0% | |
| ATGACTCAATAGCTGAATAG+AGG | - | chr4_1:57791399-57791418 | None:intergenic | 35.0% | |
| TTATTCAGTTGCTCCATCTA+TGG | + | chr4_1:57791430-57791449 | Msa0558780:CDS | 35.0% | |
| TATTCAGTTGCTCCATCTAT+GGG | + | chr4_1:57791431-57791450 | Msa0558780:CDS | 35.0% | |
| !! | GGAACTCTAAAATGTGATTC+TGG | - | chr4_1:57791565-57791584 | None:intergenic | 35.0% |
| TTGAAGTGAGCTTCATTTGT+TGG | - | chr4_1:57791606-57791625 | None:intergenic | 35.0% | |
| ACAAATGAAGCTCACTTCAA+AGG | + | chr4_1:57791606-57791625 | Msa0558780:CDS | 35.0% | |
| AATGGGCAATCTGTGATTAT+AGG | + | chr4_1:57792038-57792057 | Msa0558780:intron | 35.0% | |
| TGTGATTATAGGTTTGTGCA+TGG | + | chr4_1:57792049-57792068 | Msa0558780:intron | 35.0% | |
| GTGATTATAGGTTTGTGCAT+GGG | + | chr4_1:57792050-57792069 | Msa0558780:intron | 35.0% | |
| CATATGAAATAGCTGAAGGA+AGG | - | chr4_1:57792311-57792330 | None:intergenic | 35.0% | |
| CTCACATATGAAATAGCTGA+AGG | - | chr4_1:57792315-57792334 | None:intergenic | 35.0% | |
| ! | TCAGCTATTTCATATGTGAG+AGG | + | chr4_1:57792315-57792334 | Msa0558780:intron | 35.0% |
| GTATGAGATAAAGGAACCTA+TGG | - | chr4_1:57792436-57792455 | None:intergenic | 35.0% | |
| AAGAATTGGACAGAAAAGTG+GGG | - | chr4_1:57792470-57792489 | None:intergenic | 35.0% | |
| GTAAGAATTGGACAGAAAAG+TGG | - | chr4_1:57792472-57792491 | None:intergenic | 35.0% | |
| TAAAAATAGCAGTGACAGAG+AGG | + | chr4_1:57792506-57792525 | Msa0558780:intron | 35.0% | |
| !!! | CTGGTGATTCCTTGTTTTTT+CGG | + | chr4_1:57792545-57792564 | Msa0558780:intron | 35.0% |
| AACTTCACATCACTAACTGT+TGG | + | chr4_1:57792800-57792819 | Msa0558780:intron | 35.0% | |
| !! | GGCATAGGTTTTGATACTTA+TGG | + | chr4_1:57792821-57792840 | Msa0558780:intron | 35.0% |
| AGAACAAGAATTCCATGTCA+TGG | - | chr4_1:57792876-57792895 | None:intergenic | 35.0% | |
| !! | ACTTATTGTCGTTGATGGTT+CGG | + | chr4_1:57792957-57792976 | Msa0558780:CDS | 35.0% |
| TACTATGCTCAAGCTTATTG+TGG | + | chr4_1:57793008-57793027 | Msa0558780:intron | 35.0% | |
| ! | ACATTTTTGCGTGCTTATTG+TGG | + | chr4_1:57793072-57793091 | Msa0558780:intron | 35.0% |
| CATAGATTATCACCAAGAGA+TGG | - | chr4_1:57793191-57793210 | None:intergenic | 35.0% | |
| !!! | CTATGTTTTATTTTGGGGAG+GGG | + | chr4_1:57793206-57793225 | Msa0558780:intron | 35.0% |
| TCTTATAGTGATGTGCCTAT+CGG | + | chr4_1:57793263-57793282 | Msa0558780:intron | 35.0% | |
| !!! | TGTATTTTAGCACAAGCTGA+AGG | + | chr4_1:57793610-57793629 | Msa0558780:intron | 35.0% |
| TACCAAAAGCTTAGGCTATT+AGG | - | chr4_1:57793722-57793741 | None:intergenic | 35.0% | |
| ! | AATAGCCTAAGCTTTTGGTA+TGG | + | chr4_1:57793722-57793741 | Msa0558780:intron | 35.0% |
| ATCAACCATACCAAAAGCTT+AGG | - | chr4_1:57793730-57793749 | None:intergenic | 35.0% | |
| CTTATCAATGCAAAACCAGT+GGG | - | chr4_1:57793871-57793890 | None:intergenic | 35.0% | |
| TCTTATCAATGCAAAACCAG+TGG | - | chr4_1:57793872-57793891 | None:intergenic | 35.0% | |
| !! | CTTCTGCATTTTTGGAAATG+TGG | + | chr4_1:57793930-57793949 | Msa0558780:CDS | 35.0% |
| AAGGAAAGGAAAAATACGTC+TGG | - | chr4_1:57794063-57794082 | None:intergenic | 35.0% | |
| CTTATAGCTTACTTGATGGA+AGG | - | chr4_1:57794082-57794101 | None:intergenic | 35.0% | |
| GGCTATTACAAACACCAATA+AGG | - | chr4_1:57794139-57794158 | None:intergenic | 35.0% | |
| !! | AGAGAAATGCTTTGAGTTGA+GGG | - | chr4_1:57794242-57794261 | None:intergenic | 35.0% |
| AGAAAAGTGAGGATATAGAG+GGG | - | chr4_1:57794275-57794294 | None:intergenic | 35.0% | |
| GAGAAAAGTGAGGATATAGA+GGG | - | chr4_1:57794276-57794295 | None:intergenic | 35.0% | |
| GAAAAAAAACATGGATGCCA+TGG | - | chr4_1:57794368-57794387 | None:intergenic | 35.0% | |
| AAAGTTGAATCAAAGATCGG+GGG | - | chr4_1:57794458-57794477 | None:intergenic | 35.0% | |
| ATATATGTCAATTGCCTTGC+TGG | - | chr4_1:57794608-57794627 | None:intergenic | 35.0% | |
| !! | GGTTGGTTAATTTGTTCAGT+TGG | - | chr4_1:57794651-57794670 | None:intergenic | 35.0% |
| CTAGATTCTCTAATTCCTAG+CGG | - | chr4_1:57794672-57794691 | None:intergenic | 35.0% | |
| !! | TTTGTTCATGTGGTTTGGTT+GGG | - | chr4_1:57794700-57794719 | None:intergenic | 35.0% |
| ! | TGCATGAATGTTTTCCTGTA+GGG | - | chr4_1:57794863-57794882 | None:intergenic | 35.0% |
| TAATAGTATAAGCAGGCACA+TGG | + | chr4_1:57795057-57795076 | Msa0558780:intron | 35.0% | |
| !! | TTTTTCAAAATGGTCCCTTG+AGG | + | chr4_1:57795096-57795115 | Msa0558780:intron | 35.0% |
| ! | TTTTCAAAATGGTCCCTTGA+GGG | + | chr4_1:57795097-57795116 | Msa0558780:intron | 35.0% |
| TTCAATTTAATGGCTCAGGA+TGG | + | chr4_1:57795244-57795263 | Msa0558780:intron | 35.0% | |
| AGGAAGAGGAAGATTTAATG+TGG | - | chr4_1:57795326-57795345 | None:intergenic | 35.0% | |
| ACATTAAATCTTCCTCTTCC+TGG | + | chr4_1:57795325-57795344 | Msa0558780:CDS | 35.0% | |
| TTGTGCTCAAAGATTTAAGC+CGG | + | chr4_1:57795399-57795418 | Msa0558780:CDS | 35.0% | |
| !! | ACATCATTCTTGTTTCTGCT+GGG | + | chr4_1:57795422-57795441 | Msa0558780:CDS | 35.0% |
| TTCATGTGATTTCGTTTGTC+AGG | + | chr4_1:57795626-57795645 | Msa0558780:intron | 35.0% | |
| ATTTCGTTTGTCAGGTATGA+TGG | + | chr4_1:57795634-57795653 | Msa0558780:intron | 35.0% | |
| CAACTAGCAAAAGACTTATG+TGG | + | chr4_1:57795730-57795749 | Msa0558780:CDS | 35.0% | |
| ACTAGCAAAAGACTTATGTG+GGG | + | chr4_1:57795732-57795751 | Msa0558780:CDS | 35.0% | |
| ! | CGATGTGTATTTTTCTTGGA+AGG | + | chr4_1:57795757-57795776 | Msa0558780:CDS | 35.0% |
| ! | TGTGTATTTTTCTTGGAAGG+AGG | + | chr4_1:57795760-57795779 | Msa0558780:CDS | 35.0% |
| CAAGTCTCTTTCATATTCAG+TGG | + | chr4_1:57795792-57795811 | Msa0558780:CDS | 35.0% | |
| AGATTAAGCAAGCTATTCAG+AGG | + | chr4_1:57795902-57795921 | Msa0558780:CDS | 35.0% | |
| !!! | GTTTTGATTCTCAACATCAC+AGG | - | chr4_1:57795945-57795964 | None:intergenic | 35.0% |
| ATCAAAACATGCCATTATCC+AGG | + | chr4_1:57795957-57795976 | Msa0558780:three_prime_UTR | 35.0% | |
| TCAAAACATGCCATTATCCA+GGG | + | chr4_1:57795958-57795977 | Msa0558780:three_prime_UTR | 35.0% | |
| CAAGGGATTTACTTGCTTAA+TGG | - | chr4_1:57795993-57796012 | None:intergenic | 35.0% | |
| TAAGCAAGTAAATCCCTTGA+TGG | + | chr4_1:57795994-57796013 | Msa0558780:three_prime_UTR | 35.0% | |
| !!! | GATGGATTGCCTTCTTTTAT+GGG | - | chr4_1:57796100-57796119 | None:intergenic | 35.0% |
| TATGAGGAGAAGGAAGAAGA+AGG | - | chr4_1:57791181-57791200 | None:intergenic | 40.0% | |
| TCTTCTTCCTTCTCCTCATA+CGG | + | chr4_1:57791181-57791200 | Msa0558780:CDS | 40.0% | |
| ATGACCCAAAATTGTGCTTG+TGG | + | chr4_1:57791245-57791264 | Msa0558780:intron | 40.0% | |
| ! | CACACCACAAGCACAATTTT+GGG | - | chr4_1:57791252-57791271 | None:intergenic | 40.0% |
| TTGGTTTCCCTGTTATACCA+CGG | - | chr4_1:57791277-57791296 | None:intergenic | 40.0% | |
| TTCAGCTATTGAGTCATGCT+CGG | + | chr4_1:57791402-57791421 | Msa0558780:CDS | 40.0% | |
| ATTGTGCAGAAACCTGATTG+TGG | - | chr4_1:57791457-57791476 | None:intergenic | 40.0% | |
| ! | AGTGAGCTTCATTTGTTGGA+GGG | - | chr4_1:57791602-57791621 | None:intergenic | 40.0% |
| ! | AAGTGAGCTTCATTTGTTGG+AGG | - | chr4_1:57791603-57791622 | None:intergenic | 40.0% |
| GATAGTCGATGAGCTTATAG+CGG | - | chr4_1:57791875-57791894 | None:intergenic | 40.0% | |
| TTATGCATGATTCAGTTCCG+TGG | + | chr4_1:57792171-57792190 | Msa0558780:intron | 40.0% | |
| ATGCACACTTGCAATGTCAT+CGG | - | chr4_1:57792238-57792257 | None:intergenic | 40.0% | |
| ATGCAAGAGCCTATGTTTCT+GGG | + | chr4_1:57792256-57792275 | Msa0558780:CDS | 40.0% | |
| !! | CTTTTCAAGCCCAGAAACAT+AGG | - | chr4_1:57792268-57792287 | None:intergenic | 40.0% |
| !! | CTATGTTTCTGGGCTTGAAA+AGG | + | chr4_1:57792266-57792285 | Msa0558780:CDS | 40.0% |
| ACAGAAAAGTGGGGCATAAA+AGG | - | chr4_1:57792461-57792480 | None:intergenic | 40.0% | |
| CGAAAAAACAAGGAATCACC+AGG | - | chr4_1:57792547-57792566 | None:intergenic | 40.0% | |
| !!! | CTTGTTTTTTCGGCTGCTAT+GGG | + | chr4_1:57792555-57792574 | Msa0558780:intron | 40.0% |
| GATGATATAACATCAAGGCG+AGG | + | chr4_1:57792725-57792744 | Msa0558780:intron | 40.0% | |
| ACATCACTAACTGTTGGCAT+AGG | + | chr4_1:57792806-57792825 | Msa0558780:intron | 40.0% | |
| TCCTGAACCTTTACAGGTTA+TGG | + | chr4_1:57792915-57792934 | Msa0558780:intron | 40.0% | |
| TCCATAACCTGTAAAGGTTC+AGG | - | chr4_1:57792919-57792938 | None:intergenic | 40.0% | |
| GCTTGATCCATAACCTGTAA+AGG | - | chr4_1:57792925-57792944 | None:intergenic | 40.0% | |
| ACAGGTTATGGATCAAGCTT+TGG | + | chr4_1:57792927-57792946 | Msa0558780:intron | 40.0% | |
| !! | TATGGATCAAGCTTTGGAGA+AGG | + | chr4_1:57792933-57792952 | Msa0558780:CDS | 40.0% |
| !! | ATGGATCAAGCTTTGGAGAA+GGG | + | chr4_1:57792934-57792953 | Msa0558780:CDS | 40.0% |
| AAGGGACTTATTGTCGTTGA+TGG | + | chr4_1:57792952-57792971 | Msa0558780:CDS | 40.0% | |
| !! | CTTATTGTCGTTGATGGTTC+GGG | + | chr4_1:57792958-57792977 | Msa0558780:CDS | 40.0% |
| ACAGTGGAAGTAGCATATGT+TGG | - | chr4_1:57792985-57793004 | None:intergenic | 40.0% | |
| CTTGAGCATAGTACTTACAG+TGG | - | chr4_1:57793001-57793020 | None:intergenic | 40.0% | |
| CGTGCTTATTGTGGTAATCA+TGG | + | chr4_1:57793081-57793100 | Msa0558780:intron | 40.0% | |
| !! | TGCTACTATTGACTCCTGAA+AGG | - | chr4_1:57793113-57793132 | None:intergenic | 40.0% |
| !! | ATTAGCCTTAGTTGACTCAG+TGG | + | chr4_1:57793144-57793163 | Msa0558780:CDS | 40.0% |
| TAAGTGCCTCTATAAGCAAG+TGG | + | chr4_1:57793544-57793563 | Msa0558780:intron | 40.0% | |
| TCTTGACCACTTGCTTATAG+AGG | - | chr4_1:57793553-57793572 | None:intergenic | 40.0% | |
| TGTCTAGTCTCAATCCCAAA+CGG | + | chr4_1:57793643-57793662 | Msa0558780:intron | 40.0% | |
| CAAAAGCTTAGGCTATTAGG+TGG | - | chr4_1:57793719-57793738 | None:intergenic | 40.0% | |
| ! | CACCTAATAGCCTAAGCTTT+TGG | + | chr4_1:57793717-57793736 | Msa0558780:intron | 40.0% |
| ATAATGAAAGATCCACCCAC+TGG | + | chr4_1:57793853-57793872 | Msa0558780:CDS | 40.0% | |
| ! | TTTGCATTGATAAGACCACC+AGG | + | chr4_1:57793877-57793896 | Msa0558780:CDS | 40.0% |
| ! | ATCGACTTTGATGTTCACCA+CGG | + | chr4_1:57794006-57794025 | Msa0558780:CDS | 40.0% |
| AGCTTACTTGATGGAAGGAA+AGG | - | chr4_1:57794077-57794096 | None:intergenic | 40.0% | |
| ATATCCTGGGATCTATTGAG+AGG | + | chr4_1:57794196-57794215 | Msa0558780:intron | 40.0% | |
| !! | GAGAGAAATGCTTTGAGTTG+AGG | - | chr4_1:57794243-57794262 | None:intergenic | 40.0% |
| AAAAGTGAGGATATAGAGGG+GGG | - | chr4_1:57794273-57794292 | None:intergenic | 40.0% | |
| GAAAAGTGAGGATATAGAGG+GGG | - | chr4_1:57794274-57794293 | None:intergenic | 40.0% | |
| GGAGAAAAGTGAGGATATAG+AGG | - | chr4_1:57794277-57794296 | None:intergenic | 40.0% | |
| ! | GCAAGCTCAGCATTTTGTTA+AGG | + | chr4_1:57794327-57794346 | Msa0558780:intron | 40.0% |
| AAGTTGAATCAAAGATCGGG+GGG | - | chr4_1:57794457-57794476 | None:intergenic | 40.0% | |
| TTCGGTTGTAAATTCCAGCA+AGG | + | chr4_1:57794591-57794610 | Msa0558780:intron | 40.0% | |
| GAACAAATTAACCAACCGCT+AGG | + | chr4_1:57794654-57794673 | Msa0558780:intron | 40.0% | |
| ATTCTCTAATTCCTAGCGGT+TGG | - | chr4_1:57794668-57794687 | None:intergenic | 40.0% | |
| !! | GTTTGTTCATGTGGTTTGGT+TGG | - | chr4_1:57794701-57794720 | None:intergenic | 40.0% |
| GGTTGTTTGTTCATGTGGTT+TGG | - | chr4_1:57794705-57794724 | None:intergenic | 40.0% | |
| ! | CATTGGGTTGTTTGTTCATG+TGG | - | chr4_1:57794710-57794729 | None:intergenic | 40.0% |
| GATGGCAGATGTAAGTCATT+GGG | - | chr4_1:57794726-57794745 | None:intergenic | 40.0% | |
| GTAGGGAGGCTAATATTAGA+AGG | - | chr4_1:57794846-57794865 | None:intergenic | 40.0% | |
| ! | TCTAATATTAGCCTCCCTAC+AGG | + | chr4_1:57794846-57794865 | Msa0558780:intron | 40.0% |
| ! | ATGAATGTTTTCCTGTAGGG+AGG | - | chr4_1:57794860-57794879 | None:intergenic | 40.0% |
| ! | CTGCATGAATGTTTTCCTGT+AGG | - | chr4_1:57794864-57794883 | None:intergenic | 40.0% |
| CAGGAAAACATTCATGCAGT+CGG | + | chr4_1:57794865-57794884 | Msa0558780:intron | 40.0% | |
| TATGCTGATATGCAGGAGTT+TGG | - | chr4_1:57794973-57794992 | None:intergenic | 40.0% | |
| TTTCAAAATGGTCCCTTGAG+GGG | + | chr4_1:57795098-57795117 | Msa0558780:intron | 40.0% | |
| TTAAATCTTCCTCTTCCTGG+AGG | + | chr4_1:57795328-57795347 | Msa0558780:CDS | 40.0% | |
| GGCTTAAATCTTTGAGCACA+AGG | - | chr4_1:57795400-57795419 | None:intergenic | 40.0% | |
| GCAGAAACAAGAATGATGTC+CGG | - | chr4_1:57795421-57795440 | None:intergenic | 40.0% | |
| !! | GACATCATTCTTGTTTCTGC+TGG | + | chr4_1:57795421-57795440 | Msa0558780:CDS | 40.0% |
| CTAGCAAAAGACTTATGTGG+GGG | + | chr4_1:57795733-57795752 | Msa0558780:CDS | 40.0% | |
| ! | GGGACGATGTGTATTTTTCT+TGG | + | chr4_1:57795753-57795772 | Msa0558780:CDS | 40.0% |
| ACACATTTCGTGCTCTTCTT+GGG | + | chr4_1:57795818-57795837 | Msa0558780:CDS | 40.0% | |
| !! | CAGGTTGATAATGCCATCAA+GGG | - | chr4_1:57796010-57796029 | None:intergenic | 40.0% |
| !! | ACAGGTTGATAATGCCATCA+AGG | - | chr4_1:57796011-57796030 | None:intergenic | 40.0% |
| ! | CCTTCTTTTATGGGACAAGT+GGG | - | chr4_1:57796091-57796110 | None:intergenic | 40.0% |
| !!! | CGATGGATTGCCTTCTTTTA+TGG | - | chr4_1:57796101-57796120 | None:intergenic | 40.0% |
| ! | CCACACCACAAGCACAATTT+TGG | - | chr4_1:57791253-57791272 | None:intergenic | 45.0% |
| CCAAAATTGTGCTTGTGGTG+TGG | + | chr4_1:57791250-57791269 | Msa0558780:intron | 45.0% | |
| CATGCAAGAGCCTATGTTTC+TGG | + | chr4_1:57792255-57792274 | Msa0558780:CDS | 45.0% | |
| TCACCAGGTATTTGAGAGTC+TGG | - | chr4_1:57792532-57792551 | None:intergenic | 45.0% | |
| CCATAGCAGCCGAAAAAACA+AGG | - | chr4_1:57792557-57792576 | None:intergenic | 45.0% | |
| !!! | CCTTGTTTTTTCGGCTGCTA+TGG | + | chr4_1:57792554-57792573 | Msa0558780:intron | 45.0% |
| TTCCTCTCCTGAACCTTTAC+AGG | + | chr4_1:57792909-57792928 | Msa0558780:intron | 45.0% | |
| AACCTGTAAAGGTTCAGGAG+AGG | - | chr4_1:57792914-57792933 | None:intergenic | 45.0% | |
| AATCATGGTGCAGACCTTTC+AGG | + | chr4_1:57793096-57793115 | Msa0558780:intron | 45.0% | |
| GATCACCACTGAGTCAACTA+AGG | - | chr4_1:57793152-57793171 | None:intergenic | 45.0% | |
| AACCTAGCATGTCCATCTCT+TGG | + | chr4_1:57793176-57793195 | Msa0558780:intron | 45.0% | |
| TTTAAATGGTTGGGGGCAGT+GGG | + | chr4_1:57793377-57793396 | Msa0558780:intron | 45.0% | |
| GACGCTTACGAAGCAAAATG+GGG | - | chr4_1:57793440-57793459 | None:intergenic | 45.0% | |
| GGACGCTTACGAAGCAAAAT+GGG | - | chr4_1:57793441-57793460 | None:intergenic | 45.0% | |
| AGGACGCTTACGAAGCAAAA+TGG | - | chr4_1:57793442-57793461 | None:intergenic | 45.0% | |
| ! | TCCTATGCATTCTGAGTTGG+TGG | + | chr4_1:57793458-57793477 | Msa0558780:intron | 45.0% |
| TCCACCAACTCAGAATGCAT+AGG | - | chr4_1:57793462-57793481 | None:intergenic | 45.0% | |
| GGATCACACAAAAGCCGTTT+GGG | - | chr4_1:57793660-57793679 | None:intergenic | 45.0% | |
| TGGATCACACAAAAGCCGTT+TGG | - | chr4_1:57793661-57793680 | None:intergenic | 45.0% | |
| AAGCTTAGGCTATTAGGTGG+AGG | - | chr4_1:57793716-57793735 | None:intergenic | 45.0% | |
| ATCAATGCAAAACCAGTGGG+TGG | - | chr4_1:57793868-57793887 | None:intergenic | 45.0% | |
| GCCATTCCAAAAGGACCTAT+GGG | + | chr4_1:57793907-57793926 | Msa0558780:CDS | 45.0% | |
| CCAAAAATGCAGAAGCCCAT+AGG | - | chr4_1:57793925-57793944 | None:intergenic | 45.0% | |
| ! | CCTATGGGCTTCTGCATTTT+TGG | + | chr4_1:57793922-57793941 | Msa0558780:CDS | 45.0% |
| TCGACTTTGATGTTCACCAC+GGG | + | chr4_1:57794007-57794026 | Msa0558780:CDS | 45.0% | |
| TTTGATGTTCACCACGGGAA+TGG | + | chr4_1:57794012-57794031 | Msa0558780:CDS | 45.0% | |
| CATCATTTGTTCCATTCCCG+TGG | - | chr4_1:57794026-57794045 | None:intergenic | 45.0% | |
| CAGAAGTTAGTGGGAGAGAA+GGG | - | chr4_1:57794308-57794327 | None:intergenic | 45.0% | |
| CTGAGCTTGCAGAAGTTAGT+GGG | - | chr4_1:57794317-57794336 | None:intergenic | 45.0% | |
| AAACATGGATGCCATGGGTT+TGG | - | chr4_1:57794362-57794381 | None:intergenic | 45.0% | |
| AGTTGAATCAAAGATCGGGG+GGG | - | chr4_1:57794456-57794475 | None:intergenic | 45.0% | |
| GGATGGCAGATGTAAGTCAT+TGG | - | chr4_1:57794727-57794746 | None:intergenic | 45.0% | |
| AGGCACATGCCCGAATAATT+AGG | - | chr4_1:57794799-57794818 | None:intergenic | 45.0% | |
| !! | ATATGCAGGAGTTTGGTGCA+AGG | - | chr4_1:57794966-57794985 | None:intergenic | 45.0% |
| ATGTGCAAGTGCAAACAGAG+TGG | - | chr4_1:57795023-57795042 | None:intergenic | 45.0% | |
| ATAAGCAGGCACATGGCATT+TGG | + | chr4_1:57795064-57795083 | Msa0558780:intron | 45.0% | |
| TTCAAAATGGTCCCTTGAGG+GGG | + | chr4_1:57795099-57795118 | Msa0558780:intron | 45.0% | |
| TCATCAAATTTGCCGGTACC+TGG | - | chr4_1:57795277-57795296 | None:intergenic | 45.0% | |
| !! | AGGTACCGGCAAATTTGATG+AGG | + | chr4_1:57795276-57795295 | Msa0558780:CDS | 45.0% |
| TACCGGCAAATTTGATGAGG+TGG | + | chr4_1:57795279-57795298 | Msa0558780:CDS | 45.0% | |
| ACCGGCAAATTTGATGAGGT+GGG | + | chr4_1:57795280-57795299 | Msa0558780:CDS | 45.0% | |
| ACCCACCTCATCAAATTTGC+CGG | - | chr4_1:57795284-57795303 | None:intergenic | 45.0% | |
| AAATTTGATGAGGTGGGTGC+TGG | + | chr4_1:57795286-57795305 | Msa0558780:CDS | 45.0% | |
| AATTTGATGAGGTGGGTGCT+GGG | + | chr4_1:57795287-57795306 | Msa0558780:CDS | 45.0% | |
| ! | TAGCTAGTGGATCTAACACG+TGG | - | chr4_1:57795660-57795679 | None:intergenic | 45.0% |
| GACACATTTCGTGCTCTTCT+TGG | + | chr4_1:57795817-57795836 | Msa0558780:CDS | 45.0% | |
| CACATTTCGTGCTCTTCTTG+GGG | + | chr4_1:57795819-57795838 | Msa0558780:CDS | 45.0% | |
| TCTTCTTGGGGACAAAAGCT+TGG | + | chr4_1:57795831-57795850 | Msa0558780:CDS | 45.0% | |
| CCCACTTGTCCCATAAAAGA+AGG | + | chr4_1:57796088-57796107 | Msa0558780:three_prime_UTR | 45.0% | |
| ! | GCCTTCTTTTATGGGACAAG+TGG | - | chr4_1:57796092-57796111 | None:intergenic | 45.0% |
| GAGGAGAAGGAAGAAGAAGG+AGG | - | chr4_1:57791178-57791197 | None:intergenic | 50.0% | |
| !! | GAGAGTACCGTATGAGGAGA+AGG | - | chr4_1:57791191-57791210 | None:intergenic | 50.0% |
| !! | GAGAGAGAGAGTACCGTATG+AGG | - | chr4_1:57791197-57791216 | None:intergenic | 50.0% |
| GTGTGGACCGTGGTATAACA+GGG | + | chr4_1:57791267-57791286 | Msa0558780:intron | 50.0% | |
| TCCATCTATGGGCCACAATC+AGG | + | chr4_1:57791442-57791461 | Msa0558780:CDS | 50.0% | |
| ACCTGATTGTGGCCCATAGA+TGG | - | chr4_1:57791446-57791465 | None:intergenic | 50.0% | |
| GCAATGTCATCGGTAGAAGC+AGG | - | chr4_1:57792228-57792247 | None:intergenic | 50.0% | |
| AGGCCAGACTCTCAAATACC+TGG | + | chr4_1:57792526-57792545 | Msa0558780:intron | 50.0% | |
| CAGGAGTCAATAGTAGCAGC+TGG | + | chr4_1:57793115-57793134 | Msa0558780:CDS | 50.0% | |
| TCAATAGTAGCAGCTGGTGC+TGG | + | chr4_1:57793121-57793140 | Msa0558780:CDS | 50.0% | |
| CACCAAGAGATGGACATGCT+AGG | - | chr4_1:57793181-57793200 | None:intergenic | 50.0% | |
| GAGGGGTAAGTGAGTGGATA+TGG | + | chr4_1:57793223-57793242 | Msa0558780:intron | 50.0% | |
| CACTGCCCCCAACCATTTAA+AGG | - | chr4_1:57793378-57793397 | None:intergenic | 50.0% | |
| CTTTAAATGGTTGGGGGCAG+TGG | + | chr4_1:57793376-57793395 | Msa0558780:intron | 50.0% | |
| TTAAATGGTTGGGGGCAGTG+GGG | + | chr4_1:57793378-57793397 | Msa0558780:intron | 50.0% | |
| GCGTCCTATGCATTCTGAGT+TGG | + | chr4_1:57793455-57793474 | Msa0558780:intron | 50.0% | |
| TCTGGAAAATAGGGGCAGCA+AGG | - | chr4_1:57793583-57793602 | None:intergenic | 50.0% | |
| ! | TTTGGAATGGCGTGATGTCC+TGG | - | chr4_1:57793898-57793917 | None:intergenic | 50.0% |
| GGACATCACGCCATTCCAAA+AGG | + | chr4_1:57793898-57793917 | Msa0558780:CDS | 50.0% | |
| CGCCATTCCAAAAGGACCTA+TGG | + | chr4_1:57793906-57793925 | Msa0558780:CDS | 50.0% | |
| !! | GCCCATAGGTCCTTTTGGAA+TGG | - | chr4_1:57793911-57793930 | None:intergenic | 50.0% |
| ! | CAGAAGCCCATAGGTCCTTT+TGG | - | chr4_1:57793916-57793935 | None:intergenic | 50.0% |
| CAGACCTCTCAATAGATCCC+AGG | - | chr4_1:57794203-57794222 | None:intergenic | 50.0% | |
| GAGTTCTGCGGAGAAAAGTG+AGG | - | chr4_1:57794286-57794305 | None:intergenic | 50.0% | |
| GCAGAAGTTAGTGGGAGAGA+AGG | - | chr4_1:57794309-57794328 | None:intergenic | 50.0% | |
| GCTGAGCTTGCAGAAGTTAG+TGG | - | chr4_1:57794318-57794337 | None:intergenic | 50.0% | |
| GGCTCAAACATCCAAACCCA+TGG | + | chr4_1:57794348-57794367 | Msa0558780:intron | 50.0% | |
| !! | TCATGTGGTTTGGTTGGGAG+AGG | - | chr4_1:57794695-57794714 | None:intergenic | 50.0% |
| !! | CAGGAGTTTGGTGCAAGGAT+TGG | - | chr4_1:57794961-57794980 | None:intergenic | 50.0% |
| AAGTGCAAACAGAGTGGAGG+GGG | - | chr4_1:57795017-57795036 | None:intergenic | 50.0% | |
| CAAGTGCAAACAGAGTGGAG+GGG | - | chr4_1:57795018-57795037 | None:intergenic | 50.0% | |
| GCAAGTGCAAACAGAGTGGA+GGG | - | chr4_1:57795019-57795038 | None:intergenic | 50.0% | |
| TGCAAGTGCAAACAGAGTGG+AGG | - | chr4_1:57795020-57795039 | None:intergenic | 50.0% | |
| GATGGAAGCTATCCAGGTAC+CGG | + | chr4_1:57795262-57795281 | Msa0558780:CDS | 50.0% | |
| ! | ATTTGATGAGGTGGGTGCTG+GGG | + | chr4_1:57795288-57795307 | Msa0558780:CDS | 50.0% |
| GTTGAGACGACCCTGGATAA+TGG | - | chr4_1:57795971-57795990 | None:intergenic | 50.0% | |
| CTTAATGGTTGAGACGACCC+TGG | - | chr4_1:57795978-57795997 | None:intergenic | 50.0% | |
| TCCATCGTGCAAGATTGCTG+TGG | + | chr4_1:57796114-57796133 | Msa0558780:three_prime_UTR | 50.0% | |
| ACCACAGCAATCTTGCACGA+TGG | - | chr4_1:57796118-57796137 | None:intergenic | 50.0% | |
| AAGAAGGAGGAGAGCGAGGA+AGG | - | chr4_1:57791165-57791184 | None:intergenic | 55.0% | |
| GAAGAAGAAGGAGGAGAGCG+AGG | - | chr4_1:57791169-57791188 | None:intergenic | 55.0% | |
| GGTGTGGACCGTGGTATAAC+AGG | + | chr4_1:57791266-57791285 | Msa0558780:intron | 55.0% | |
| TGGAGGGCAGTGAGAATTGC+AGG | - | chr4_1:57791586-57791605 | None:intergenic | 55.0% | |
| ! | GATTCAGTTCCGTGGCTCTG+AGG | + | chr4_1:57792179-57792198 | Msa0558780:intron | 55.0% |
| GTTCAACGACCTCAGAGCCA+CGG | - | chr4_1:57792191-57792210 | None:intergenic | 55.0% | |
| TTTGGGGAGGGGTAAGTGAG+TGG | + | chr4_1:57793217-57793236 | Msa0558780:intron | 55.0% | |
| TAAATGGTTGGGGGCAGTGG+GGG | + | chr4_1:57793379-57793398 | Msa0558780:intron | 55.0% | |
| CTGAGCATGACGAGCTGCAA+TGG | - | chr4_1:57793956-57793975 | None:intergenic | 55.0% | |
| CGTCATGCTCAGCGTGTTCA+TGG | + | chr4_1:57793964-57793983 | Msa0558780:CDS | 55.0% | |
| TGGGAGAGAAGGGAGTTCTG+CGG | - | chr4_1:57794298-57794317 | None:intergenic | 55.0% | |
| AAAATGGTCCCTTGAGGGGG+AGG | + | chr4_1:57795102-57795121 | Msa0558780:intron | 55.0% | |
| AAATGGTCCCTTGAGGGGGA+GGG | + | chr4_1:57795103-57795122 | Msa0558780:intron | 55.0% | |
| GCTCAGGATGGAAGCTATCC+AGG | + | chr4_1:57795256-57795275 | Msa0558780:intron | 55.0% | |
| CTTCCTCTTCCTGGAGGTTC+AGG | + | chr4_1:57795334-57795353 | Msa0558780:CDS | 55.0% | |
| TCACCTGAACCTCCAGGAAG+AGG | - | chr4_1:57795340-57795359 | None:intergenic | 55.0% | |
| GCAGTATCACCTGAACCTCC+AGG | - | chr4_1:57795346-57795365 | None:intergenic | 55.0% | |
| ! | AAGGTAGGAGGGGAGGTGCA+TGG | - | chr4_1:57791146-57791165 | None:intergenic | 60.0% |
| GAGAGCGAGGAAGGTAGGAG+GGG | - | chr4_1:57791156-57791175 | None:intergenic | 60.0% | |
| GGAGAGCGAGGAAGGTAGGA+GGG | - | chr4_1:57791157-57791176 | None:intergenic | 60.0% | |
| AGGAGAGCGAGGAAGGTAGG+AGG | - | chr4_1:57791158-57791177 | None:intergenic | 60.0% | |
| AGGAGGAGAGCGAGGAAGGT+AGG | - | chr4_1:57791161-57791180 | None:intergenic | 60.0% | |
| TGTGCTTGTGGTGTGGACCG+TGG | + | chr4_1:57791257-57791276 | Msa0558780:intron | 60.0% | |
| AGGCTATTAGGTGGAGGCCC+TGG | - | chr4_1:57793710-57793729 | None:intergenic | 60.0% | |
| GGAATGGCGTGATGTCCTGG+TGG | - | chr4_1:57793895-57793914 | None:intergenic | 60.0% | |
| AATGGTCCCTTGAGGGGGAG+GGG | + | chr4_1:57795104-57795123 | Msa0558780:intron | 60.0% | |
| ! | GGGGAGGGGGCTTGGTAATT+GGG | + | chr4_1:57795118-57795137 | Msa0558780:intron | 60.0% |
| ! | GAGGGGGCTTGGTAATTGGG+CGG | + | chr4_1:57795121-57795140 | Msa0558780:intron | 60.0% |
| ! | AGGGGGCTTGGTAATTGGGC+GGG | + | chr4_1:57795122-57795141 | Msa0558780:intron | 60.0% |
| ! | GCTTGGTAATTGGGCGGGGA+AGG | + | chr4_1:57795127-57795146 | Msa0558780:intron | 60.0% |
| GTTTGGCGCTGCTGCTGCTG+CGG | + | chr4_1:57791103-57791122 | Msa0558780:five_prime_UTR | 65.0% | |
| AGCGAGGAAGGTAGGAGGGG+AGG | - | chr4_1:57791153-57791172 | None:intergenic | 65.0% | |
| ATGGTCCCTTGAGGGGGAGG+GGG | + | chr4_1:57795105-57795124 | Msa0558780:intron | 65.0% | |
| ! | GGGGGAGGGGGCTTGGTAAT+TGG | + | chr4_1:57795117-57795136 | Msa0558780:intron | 65.0% |
| ! | GGGGGCTTGGTAATTGGGCG+GGG | + | chr4_1:57795123-57795142 | Msa0558780:intron | 65.0% |
| !! | GATGAGGTGGGTGCTGGGGA+TGG | + | chr4_1:57795292-57795311 | Msa0558780:CDS | 65.0% |
| !! | GTGGGTGCTGGGGATGGTGA+AGG | + | chr4_1:57795298-57795317 | Msa0558780:CDS | 65.0% |
| CCAAGCCCCCTCCCCCTCAA+GGG | - | chr4_1:57795113-57795132 | None:intergenic | 70.0% | |
| ACCAAGCCCCCTCCCCCTCA+AGG | - | chr4_1:57795114-57795133 | None:intergenic | 70.0% | |
| CCCTTGAGGGGGAGGGGGCT+TGG | + | chr4_1:57795110-57795129 | Msa0558780:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 57791038 | 57796210 | 57791038 | ID=Msa0558780;Name=Msa0558780 |
| chr4_1 | mRNA | 57791038 | 57796210 | 57791038 | ID=Msa0558780-mRNA-1;Parent=Msa0558780;Name=Msa0558780-mRNA-1;_AED=0.19;_eAED=0.19;_QI=107|1|1|1|1|1|9|262|424 |
| chr4_1 | exon | 57791038 | 57791202 | 57791038 | ID=Msa0558780-mRNA-1:exon:17546;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57791288 | 57791463 | 57791288 | ID=Msa0558780-mRNA-1:exon:17547;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57791553 | 57791627 | 57791553 | ID=Msa0558780-mRNA-1:exon:17548;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57792186 | 57792287 | 57792186 | ID=Msa0558780-mRNA-1:exon:17549;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57792931 | 57793002 | 57792931 | ID=Msa0558780-mRNA-1:exon:17550;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57793109 | 57793165 | 57793109 | ID=Msa0558780-mRNA-1:exon:17551;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57793838 | 57794089 | 57793838 | ID=Msa0558780-mRNA-1:exon:17552;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57795262 | 57795443 | 57795262 | ID=Msa0558780-mRNA-1:exon:17553;Parent=Msa0558780-mRNA-1 |
| chr4_1 | exon | 57795648 | 57796210 | 57795648 | ID=Msa0558780-mRNA-1:exon:17554;Parent=Msa0558780-mRNA-1 |
| chr4_1 | five_prime_UTR | 57791038 | 57791144 | 57791038 | ID=Msa0558780-mRNA-1:five_prime_utr;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57791145 | 57791202 | 57791145 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57791288 | 57791463 | 57791288 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57791553 | 57791627 | 57791553 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57792186 | 57792287 | 57792186 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57792931 | 57793002 | 57792931 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57793109 | 57793165 | 57793109 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57793838 | 57794089 | 57793838 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57795262 | 57795443 | 57795262 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | CDS | 57795648 | 57795948 | 57795648 | ID=Msa0558780-mRNA-1:cds;Parent=Msa0558780-mRNA-1 |
| chr4_1 | three_prime_UTR | 57795949 | 57796210 | 57795949 | ID=Msa0558780-mRNA-1:three_prime_utr;Parent=Msa0558780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
