AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0511910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0511910 MtrunA17_Chr3g0118771 93.561 497 29 1 1 497 1 494 0.0 974
Msa0511910 MtrunA17_Chr3g0118711 81.913 481 87 0 16 496 5 485 0.0 849
Msa0511910 MtrunA17_Chr3g0118751 86.373 477 36 2 21 497 3 450 0.0 847
Msa0511910 MtrunA17_Chr3g0118691 81.781 483 87 1 16 497 6 488 0.0 845
Msa0511910 MtrunA17_Chr3g0118671 81.513 476 88 0 21 496 3 478 0.0 836
Msa0511910 MtrunA17_Chr3g0118701 79.917 483 96 1 16 497 6 488 0.0 830
Msa0511910 MtrunA17_Chr3g0118661 66.667 480 159 1 18 497 7 485 0.0 652
Msa0511910 MtrunA17_Chr5g0426431 55.414 471 204 5 24 492 12 478 0.0 551
Msa0511910 MtrunA17_Chr3g0092641 54.449 472 209 5 23 492 11 478 0.0 542
Msa0511910 MtrunA17_Chr3g0118721 84.068 295 47 0 203 497 1 295 0.0 535
Msa0511910 MtrunA17_Chr3g0078841 51.163 473 227 3 22 492 8 478 0.0 518
Msa0511910 MtrunA17_Chr6g0454341 49.895 475 234 3 20 492 6 478 1.57e-178 509
Msa0511910 MtrunA17_Chr6g0454191 50.415 482 230 5 17 492 3 481 4.81e-178 508
Msa0511910 MtrunA17_Chr2g0278711 50.840 476 226 5 20 492 7 477 2.12e-176 504
Msa0511910 MtrunA17_Chr6g0454331 51.255 478 223 4 22 492 5 479 6.50e-176 503
Msa0511910 MtrunA17_Chr6g0454401 50.313 479 229 4 20 492 6 481 3.14e-173 496
Msa0511910 MtrunA17_Chr6g0454321 48.950 476 236 4 20 493 6 476 1.96e-172 500
Msa0511910 MtrunA17_Chr6g0454321 48.148 135 65 2 21 150 501 635 5.75e-30 124
Msa0511910 MtrunA17_Chr6g0453951 49.583 480 234 4 18 492 51 527 5.70e-172 495
Msa0511910 MtrunA17_Chr4g0050341 48.262 489 249 2 7 491 2 490 6.79e-172 493
Msa0511910 MtrunA17_Chr8g0336331 50.105 475 232 4 20 492 6 477 1.25e-171 492
Msa0511910 MtrunA17_Chr6g0454301 50.737 475 230 3 20 492 259 731 6.25e-171 499
Msa0511910 MtrunA17_Chr6g0454301 54.585 229 101 2 262 490 3 228 1.78e-84 275
Msa0511910 MtrunA17_Chr6g0454201 52.521 476 218 5 22 492 9 481 6.03e-170 488
Msa0511910 MtrunA17_Chr6g0454181 48.008 477 240 4 21 492 7 480 2.11e-169 486
Msa0511910 MtrunA17_Chr6g0454211 50.943 477 226 4 21 492 294 767 4.28e-168 493
Msa0511910 MtrunA17_Chr6g0454211 33.714 350 147 4 142 491 3 267 2.86e-56 200
Msa0511910 MtrunA17_Chr6g0454361 50.210 476 229 4 22 492 9 481 1.28e-167 482
Msa0511910 MtrunA17_Chr6g0453961 48.367 490 244 5 9 492 4 490 2.83e-166 479
Msa0511910 MtrunA17_Chr6g0454291 50.314 477 229 4 21 492 4 477 1.29e-165 477
Msa0511910 MtrunA17_Chr8g0359821 48.000 475 241 3 21 492 7 478 1.03e-164 474
Msa0511910 MtrunA17_Chr6g0454351 48.125 480 224 5 18 492 6 465 8.51e-164 472
Msa0511910 MtrunA17_Chr6g0452771 48.637 477 237 4 21 492 7 480 3.78e-158 458
Msa0511910 MtrunA17_Chr6g0454151 47.917 480 240 5 21 495 7 481 1.40e-156 454
Msa0511910 MtrunA17_Chr6g0454261 47.170 477 244 4 21 492 7 480 4.26e-156 452
Msa0511910 MtrunA17_Chr6g0454141 46.122 477 249 4 21 492 7 480 1.37e-154 449
Msa0511910 MtrunA17_Chr6g0454121 46.737 475 246 4 22 492 8 479 3.09e-153 445
Msa0511910 MtrunA17_Chr6g0454131 46.105 475 249 4 22 492 8 479 1.73e-150 438
Msa0511910 MtrunA17_Chr7g0217881 46.541 477 229 5 21 492 7 462 7.04e-150 436
Msa0511910 MtrunA17_Chr5g0423981 46.331 477 211 7 22 492 8 445 1.02e-145 425
Msa0511910 MtrunA17_Chr6g0454251 47.342 395 200 4 21 410 4 395 5.85e-135 395
Msa0511910 MtrunA17_Chr5g0426401 51.923 312 143 5 184 492 4 311 1.41e-113 338
Msa0511910 MtrunA17_Chr6g0454271 52.414 290 135 2 203 492 1 287 2.25e-106 318
Msa0511910 MtrunA17_Chr8g0355011 39.646 396 189 5 102 492 12 362 1.14e-99 304
Msa0511910 MtrunA17_Chr5g0412131 35.477 482 271 11 23 489 11 467 3.91e-92 288
Msa0511910 MtrunA17_Chr3g0112771 34.958 472 271 10 25 492 13 452 1.37e-90 284
Msa0511910 MtrunA17_Chr6g0454221 54.506 233 104 2 262 494 3 233 1.16e-88 273
Msa0511910 MtrunA17_Chr6g0454171 40.774 336 148 5 161 492 22 310 2.57e-88 273
Msa0511910 MtrunA17_Chr5g0412111 33.884 484 279 11 21 489 2 459 2.50e-87 276
Msa0511910 MtrunA17_Chr5g0412101 34.647 482 276 10 23 489 11 468 1.92e-86 274
Msa0511910 MtrunA17_Chr3g0112761 34.958 472 275 11 24 492 8 450 8.55e-86 271
Msa0511910 MtrunA17_Chr4g0032331 33.264 484 279 12 22 496 6 454 3.35e-77 249
Msa0511910 MtrunA17_Chr5g0414331 31.984 494 279 12 17 495 6 457 6.58e-75 243
Msa0511910 MtrunA17_Chr5g0414321 32.245 490 283 13 17 495 4 455 4.54e-74 241
Msa0511910 MtrunA17_Chr7g0249981 30.879 489 290 12 20 497 21 472 6.60e-74 241
Msa0511910 MtrunA17_Chr6g0464921 30.913 482 294 10 18 491 5 455 2.61e-72 236
Msa0511910 MtrunA17_Chr6g0464881 30.943 488 283 11 20 492 7 455 3.01e-72 236
Msa0511910 MtrunA17_Chr7g0250001 29.622 476 301 8 22 493 4 449 5.06e-72 236
Msa0511910 MtrunA17_Chr3g0118731 92.727 110 8 0 76 185 28 137 4.60e-69 218
Msa0511910 MtrunA17_Chr8g0336271 46.250 240 126 2 20 257 6 244 6.27e-69 222
Msa0511910 MtrunA17_Chr8g0365811 31.526 498 285 16 5 480 483 946 6.65e-69 237
Msa0511910 MtrunA17_Chr8g0365811 28.903 474 285 14 19 466 3 450 3.83e-56 201
Msa0511910 MtrunA17_Chr3g0098111 28.776 490 319 11 20 497 4 475 9.62e-68 225
Msa0511910 MtrunA17_Chr6g0464871 30.898 479 291 11 24 494 23 469 1.11e-67 224
Msa0511910 MtrunA17_Chr7g0218831 31.635 471 278 12 23 488 5 436 2.64e-67 223
Msa0511910 MtrunA17_Chr7g0218811 30.149 471 286 12 23 488 14 446 3.89e-67 223
Msa0511910 MtrunA17_Chr7g0218821 30.544 478 286 13 23 488 4 447 5.59e-67 222
Msa0511910 MtrunA17_Chr6g0464841 31.315 479 283 12 24 491 11 454 1.24e-66 221
Msa0511910 MtrunA17_Chr7g0218841 31.992 472 276 14 23 488 5 437 1.25e-66 221
Msa0511910 MtrunA17_Chr1g0207861 30.833 480 301 12 24 491 8 468 3.49e-66 221
Msa0511910 MtrunA17_Chr7g0218791 30.913 482 280 15 23 490 4 446 5.18e-66 219
Msa0511910 MtrunA17_Chr1g0207971 29.106 481 299 12 24 494 8 456 7.25e-65 217
Msa0511910 MtrunA17_Chr1g0161351 29.622 503 316 13 6 491 16 497 1.15e-64 218
Msa0511910 MtrunA17_Chr1g0207981 30.498 482 301 10 24 492 13 473 6.79e-64 215
Msa0511910 MtrunA17_Chr6g0464861 31.381 478 285 11 23 491 10 453 7.25e-64 214
Msa0511910 MtrunA17_Chr6g0454371 54.651 172 77 1 321 492 1 171 1.09e-63 204
Msa0511910 MtrunA17_Chr6g0454231 45.259 232 125 1 20 249 246 477 7.26e-63 212
Msa0511910 MtrunA17_Chr6g0454231 42.188 256 106 4 238 492 5 219 9.89e-59 201
Msa0511910 MtrunA17_Chr4g0044511 30.400 500 293 14 18 491 34 504 1.06e-62 213
Msa0511910 MtrunA17_Chr5g0426411 57.317 164 69 1 21 183 9 172 5.45e-62 200
Msa0511910 MtrunA17_Chr1g0207951 30.000 480 297 12 24 494 124 573 1.14e-61 218
Msa0511910 MtrunA17_Chr1g0207951 27.789 493 303 13 24 497 656 1114 8.21e-58 207
Msa0511910 MtrunA17_Chr1g0207831 29.376 497 291 14 25 497 9 469 9.39e-61 206
Msa0511910 MtrunA17_Chr8g0377921 29.012 486 298 13 23 488 2 460 9.26e-60 203
Msa0511910 MtrunA17_Chr6g0453981 40.948 232 134 2 142 373 3 231 9.52e-59 194
Msa0511910 MtrunA17_Chr3g0121991 29.675 492 305 16 20 491 75 545 3.63e-58 201
Msa0511910 MtrunA17_Chr8g0380531 28.092 477 305 13 24 491 10 457 4.36e-58 199
Msa0511910 MtrunA17_Chr3g0122001 29.039 489 312 13 20 491 482 952 3.59e-57 204
Msa0511910 MtrunA17_Chr3g0122001 28.659 492 311 13 20 491 2 473 2.26e-55 199
Msa0511910 MtrunA17_Chr5g0393591 30.063 479 264 11 24 491 17 435 1.04e-56 195
Msa0511910 MtrunA17_Chr5g0401721 28.340 494 304 17 25 495 9 475 1.25e-56 196
Msa0511910 MtrunA17_Chr7g0249931 28.333 480 300 12 24 493 40 485 1.96e-56 195
Msa0511910 MtrunA17_Chr4g0053321 29.065 492 305 14 20 495 20 483 2.26e-56 195
Msa0511910 MtrunA17_Chr8g0336261 58.696 138 56 1 321 458 1 137 3.60e-56 183
Msa0511910 MtrunA17_Chr4g0053501 29.012 486 303 15 24 495 11 468 5.73e-56 194
Msa0511910 MtrunA17_Chr6g0453941 48.168 191 96 2 162 351 75 263 1.71e-55 187
Msa0511910 MtrunA17_Chr5g0431441 29.752 484 292 15 24 493 18 467 5.72e-55 191
Msa0511910 MtrunA17_Chr5g0431401 29.278 485 280 16 24 491 10 448 1.39e-54 189
Msa0511910 MtrunA17_Chr8g0377941 28.257 499 300 16 17 494 3 464 2.68e-54 189
Msa0511910 MtrunA17_Chr6g0454281 48.187 193 95 2 17 204 3 195 2.71e-54 181
Msa0511910 MtrunA17_Chr7g0243931 30.059 509 284 16 22 491 15 490 9.59e-54 188
Msa0511910 MtrunA17_Chr5g0431361 29.046 482 288 15 24 491 12 453 1.89e-53 186
Msa0511910 MtrunA17_Chr1g0207931 36.437 247 146 3 241 480 244 486 1.97e-53 187
Msa0511910 MtrunA17_Chr7g0275681 30.174 517 286 16 16 494 4 483 2.58e-53 187
Msa0511910 MtrunA17_Chr5g0431371 29.668 482 282 15 24 491 10 448 5.59e-53 185
Msa0511910 MtrunA17_Chr7g0265041 29.365 504 306 12 23 496 10 493 1.20e-52 185
Msa0511910 MtrunA17_Chr8g0366391 29.762 504 310 16 18 497 3 486 1.31e-52 185
Msa0511910 MtrunA17_Chr7g0243681 29.240 513 287 17 17 491 5 479 3.98e-52 184
Msa0511910 MtrunA17_Chr7g0243951 28.770 504 296 14 22 491 9 483 8.94e-52 183
Msa0511910 MtrunA17_Chr8g0373301 29.496 417 249 9 90 487 72 462 1.25e-51 182
Msa0511910 MtrunA17_Chr4g0072771 26.316 475 311 11 21 489 22 463 7.99e-51 180
Msa0511910 MtrunA17_Chr5g0431421 28.747 487 282 15 24 492 10 449 1.12e-50 179
Msa0511910 MtrunA17_Chr5g0440421 29.045 513 300 19 21 493 7 495 2.01e-50 179
Msa0511910 MtrunA17_Chr7g0243631 30.178 507 282 19 24 491 13 486 2.82e-50 179
Msa0511910 MtrunA17_Chr8g0336741 29.218 486 283 17 20 479 9 459 4.13e-50 178
Msa0511910 MtrunA17_Chr7g0243771 30.375 507 277 18 24 491 6 475 1.30e-49 177
Msa0511910 MtrunA17_Chr7g0243801 29.541 501 297 15 20 491 3 476 1.65e-49 177
Msa0511910 MtrunA17_Chr6g0449931 30.357 504 277 17 22 491 4 467 3.70e-49 175
Msa0511910 MtrunA17_Chr6g0462571 31.593 364 207 10 139 487 121 457 4.13e-49 175
Msa0511910 MtrunA17_Chr7g0249961 35.417 240 136 5 262 493 33 261 5.75e-49 169
Msa0511910 MtrunA17_Chr7g0265141 28.544 522 288 18 18 492 3 486 1.02e-48 174
Msa0511910 MtrunA17_Chr7g0243861 28.320 512 305 16 14 491 4 487 1.24e-48 174
Msa0511910 MtrunA17_Chr8g0339631 29.274 427 243 12 77 480 67 457 1.36e-48 174
Msa0511910 MtrunA17_Chr7g0232401 26.489 487 292 14 24 480 6 456 1.39e-48 174
Msa0511910 MtrunA17_Chr7g0232411 27.455 499 290 17 24 490 6 464 3.54e-48 172
Msa0511910 MtrunA17_Chr1g0153451 28.144 501 295 17 24 495 6 470 3.55e-48 172
Msa0511910 MtrunA17_Chr7g0232391 28.373 504 279 20 24 490 6 464 8.28e-48 172
Msa0511910 MtrunA17_Chr4g0060511 28.571 504 297 15 24 491 11 487 9.30e-48 172
Msa0511910 MtrunA17_Chr8g0374931 28.629 496 295 14 27 491 14 481 1.31e-47 171
Msa0511910 MtrunA17_Chr5g0419761 28.150 508 314 14 19 496 4 490 1.45e-47 171
Msa0511910 MtrunA17_Chr8g0336691 35.556 270 142 7 238 487 1118 1375 2.78e-47 176
Msa0511910 MtrunA17_Chr8g0336691 25.859 495 298 14 24 487 13 469 1.13e-46 174
Msa0511910 MtrunA17_Chr8g0336691 28.421 475 269 17 24 480 480 901 1.86e-43 165
Msa0511910 MtrunA17_Chr6g0486251 26.585 489 298 14 25 487 7 460 5.04e-47 169
Msa0511910 MtrunA17_Chr6g0486201 26.585 489 298 14 25 487 7 460 5.04e-47 169
Msa0511910 MtrunA17_Chr4g0014061 29.400 500 283 18 25 491 10 472 5.69e-47 169
Msa0511910 MtrunA17_Chr8g0335141 28.600 500 299 18 17 491 2 468 5.88e-47 169
Msa0511910 MtrunA17_Chr7g0232331 26.482 506 297 18 20 491 2 466 6.99e-47 169
Msa0511910 MtrunA17_Chr6g0462531 27.755 490 285 15 22 480 2 453 1.06e-46 169
Msa0511910 MtrunA17_Chr8g0336651 27.902 491 291 15 24 487 6 460 1.24e-46 174
Msa0511910 MtrunA17_Chr8g0336651 27.721 487 287 16 24 480 781 1232 1.45e-45 171
Msa0511910 MtrunA17_Chr8g0336651 31.395 258 137 5 238 487 545 770 1.09e-35 142
Msa0511910 MtrunA17_Chr6g0462521 27.291 491 290 13 22 489 2 448 1.44e-46 168
Msa0511910 MtrunA17_Chr8g0335161 27.291 502 304 17 20 495 2 468 1.51e-46 168
Msa0511910 MtrunA17_Chr4g0072761 26.059 472 307 11 24 489 15 450 1.76e-46 167
Msa0511910 MtrunA17_Chr7g0243871 28.458 506 294 15 18 491 3 472 2.02e-46 168
Msa0511910 MtrunA17_Chr7g0275511 29.328 491 288 15 23 487 14 471 2.16e-46 168
Msa0511910 MtrunA17_Chr4g0044501 28.400 500 307 17 24 497 10 484 2.28e-46 168
Msa0511910 MtrunA17_Chr7g0243781 27.379 515 291 16 18 491 3 475 4.93e-46 167
Msa0511910 MtrunA17_Chr8g0336731 30.769 377 220 10 130 488 134 487 5.44e-46 167
Msa0511910 MtrunA17_Chr5g0419771 26.946 501 313 13 24 493 36 514 5.54e-46 167
Msa0511910 MtrunA17_Chr6g0462541 30.628 382 221 8 122 487 106 459 7.59e-46 166
Msa0511910 MtrunA17_Chr6g0459311 27.016 496 295 17 21 487 10 467 8.67e-46 166
Msa0511910 MtrunA17_Chr5g0448551 25.843 445 294 10 21 459 4 418 8.78e-46 166
Msa0511910 MtrunA17_Chr5g0442561 27.559 508 300 17 21 494 2 475 1.01e-45 166
Msa0511910 MtrunA17_Chr7g0265101 28.628 503 319 14 18 495 3 490 1.01e-45 167
Msa0511910 MtrunA17_Chr3g0106231 27.699 491 277 15 24 492 18 452 1.79e-45 165
Msa0511910 MtrunA17_Chr2g0294931 28.313 498 306 13 21 491 8 481 4.41e-45 165
Msa0511910 MtrunA17_Chr2g0294921 29.376 497 290 16 27 491 163 630 5.71e-45 167
Msa0511910 MtrunA17_Chr1g0159551 26.752 471 285 14 29 480 19 448 9.54e-45 163
Msa0511910 MtrunA17_Chr7g0232341 26.916 509 291 19 20 491 2 466 1.26e-44 163
Msa0511910 MtrunA17_Chr8g0339451 29.469 414 233 11 91 480 74 452 1.76e-44 162
Msa0511910 MtrunA17_Chr6g0462551 33.113 302 173 7 200 487 174 460 2.80e-44 162
Msa0511910 MtrunA17_Chr1g0179901 26.969 508 305 20 24 493 16 495 3.23e-44 162
Msa0511910 MtrunA17_Chr5g0428081 27.049 488 311 12 27 491 14 479 6.14e-44 161
Msa0511910 MtrunA17_Chr8g0339461 31.135 379 214 12 130 484 109 464 6.65e-44 161
Msa0511910 MtrunA17_Chr5g0442601 27.713 516 299 17 18 494 398 878 1.04e-43 165
Msa0511910 MtrunA17_Chr5g0442601 35.556 180 95 3 264 432 164 333 2.82e-27 116
Msa0511910 MtrunA17_Chr4g0066221 28.600 493 298 14 27 491 14 480 1.49e-43 160
Msa0511910 MtrunA17_Chr5g0442581 26.938 516 303 15 21 497 2 482 1.50e-43 161
Msa0511910 MtrunA17_Chr8g0374971 28.543 501 287 15 27 491 15 480 1.57e-43 160
Msa0511910 MtrunA17_Chr8g0334851 27.345 501 284 17 22 484 4 462 2.07e-43 160
Msa0511910 MtrunA17_Chr5g0442541 28.937 508 282 20 21 492 2 466 2.24e-43 159
Msa0511910 MtrunA17_Chr7g0232311 31.818 308 175 6 200 488 169 460 2.28e-43 159
Msa0511910 MtrunA17_Chr7g0235051 30.178 507 262 23 17 490 5 452 5.82e-43 158
Msa0511910 MtrunA17_Chr5g0442521 27.505 509 290 17 21 488 2 472 6.94e-43 158
Msa0511910 MtrunA17_Chr8g0361371 27.613 507 285 19 21 488 4 467 7.78e-43 158
Msa0511910 MtrunA17_Chr8g0347281 28.008 482 286 15 23 480 17 461 9.11e-43 158
Msa0511910 MtrunA17_Chr7g0243761 27.778 486 291 14 24 491 11 454 9.14e-43 158
Msa0511910 MtrunA17_Chr8g0339601 32.042 284 158 7 219 479 47 318 1.01e-42 154
Msa0511910 MtrunA17_Chr8g0347271 27.673 477 294 12 23 480 18 462 1.16e-42 158
Msa0511910 MtrunA17_Chr1g0173121 25.050 499 291 14 25 491 15 462 1.40e-42 157
Msa0511910 MtrunA17_Chr7g0265151 25.838 507 327 15 19 496 2 488 2.48e-42 157
Msa0511910 MtrunA17_Chr4g0066281 27.088 491 293 14 27 491 15 466 2.67e-42 157
Msa0511910 MtrunA17_Chr8g0374941 28.685 502 285 20 27 491 952 1417 3.13e-42 161
Msa0511910 MtrunA17_Chr8g0374941 27.160 486 281 19 27 475 14 463 4.45e-36 143
Msa0511910 MtrunA17_Chr8g0374941 27.766 479 283 16 27 473 479 926 7.81e-36 142
Msa0511910 MtrunA17_Chr8g0374901 29.259 499 284 17 27 491 15 478 3.50e-42 157
Msa0511910 MtrunA17_Chr3g0079731 26.494 502 302 15 25 489 7 478 5.40e-42 156
Msa0511910 MtrunA17_Chr5g0448521 26.901 513 292 19 21 494 2 470 7.91e-42 155
Msa0511910 MtrunA17_Chr8g0334861 26.721 494 304 15 21 490 3 462 1.30e-41 155
Msa0511910 MtrunA17_Chr7g0265051 27.539 512 311 17 18 495 3 488 1.86e-41 155
Msa0511910 MtrunA17_Chr4g0066261 27.181 493 306 16 27 491 14 481 1.87e-41 155
Msa0511910 MtrunA17_Chr5g0442511 27.327 505 276 16 18 488 43 490 3.52e-41 154
Msa0511910 MtrunA17_Chr6g0454111 43.558 163 89 2 180 341 23 183 6.10e-41 145
Msa0511910 MtrunA17_Chr4g0011051 27.364 497 320 13 22 492 7 488 6.98e-41 153
Msa0511910 MtrunA17_Chr5g0401851 26.181 508 297 17 26 491 12 483 9.54e-41 152
Msa0511910 MtrunA17_Chr1g0153461 37.557 221 113 6 297 495 2 219 9.73e-41 145
Msa0511910 MtrunA17_Chr4g0066201 27.699 491 296 14 27 493 21 476 1.22e-40 152
Msa0511910 MtrunA17_Chr8g0350881 28.063 506 287 15 25 491 13 480 7.88e-40 150
Msa0511910 MtrunA17_Chr7g0218311 26.667 495 303 15 27 491 19 483 1.65e-39 149
Msa0511910 MtrunA17_Chr2g0329111 26.132 486 303 13 20 477 2 459 1.86e-39 149
Msa0511910 MtrunA17_Chr5g0416741 25.896 502 322 15 18 491 4 483 1.89e-39 149
Msa0511910 MtrunA17_Chr5g0410941 25.866 491 311 12 27 491 26 489 2.69e-39 149
Msa0511910 MtrunA17_Chr6g0463851 27.800 500 295 17 27 491 14 482 3.89e-39 148
Msa0511910 MtrunA17_Chr5g0442491 26.265 514 301 15 21 494 2 477 4.15e-39 148
Msa0511910 MtrunA17_Chr7g0265111 26.347 501 314 18 24 492 39 516 6.86e-39 148
Msa0511910 MtrunA17_Chr8g0334831 28.200 500 245 23 21 461 3 447 1.40e-38 147
Msa0511910 MtrunA17_Chr4g0044521 27.310 487 300 19 25 489 10 464 1.47e-38 146
Msa0511910 MtrunA17_Chr4g0066131 25.992 504 293 15 25 491 14 474 4.88e-38 145
Msa0511910 MtrunA17_Chr4g0066151 26.411 496 301 15 25 491 19 479 5.19e-38 145
Msa0511910 MtrunA17_Chr8g0339441 36.715 207 112 4 298 485 217 423 1.58e-37 142
Msa0511910 MtrunA17_Chr5g0432731 30.128 312 187 8 194 493 6 298 1.70e-37 139
Msa0511910 MtrunA17_Chr5g0420801 26.694 487 311 19 20 491 3 458 4.44e-37 142
Msa0511910 MtrunA17_Chr6g0463891 27.291 491 314 14 25 491 13 484 6.16e-37 142
Msa0511910 MtrunA17_Chr6g0463861 27.163 497 293 18 27 491 14 473 7.20e-37 142
Msa0511910 MtrunA17_Chr5g0403641 31.034 290 153 9 240 496 235 510 2.36e-36 141
Msa0511910 MtrunA17_Chr7g0243851 33.226 310 173 10 211 491 138 442 3.82e-36 139
Msa0511910 MtrunA17_Chr4g0044481 27.273 429 252 12 18 435 21 400 3.86e-36 139
Msa0511910 MtrunA17_Chr8g0370941 24.016 508 315 14 24 489 8 486 4.16e-36 140
Msa0511910 MtrunA17_Chr5g0416821 25.523 478 326 12 25 491 15 473 9.54e-36 139
Msa0511910 MtrunA17_Chr5g0429681 25.752 532 269 19 21 495 41 503 9.89e-36 139
Msa0511910 MtrunA17_Chr3g0118741 94.828 58 3 0 21 78 3 60 3.45e-35 125
Msa0511910 MtrunA17_Chr7g0241801 28.416 461 257 22 21 468 6 406 4.82e-35 135
Msa0511910 MtrunA17_Chr5g0429711 26.572 493 311 16 20 495 7 465 1.02e-34 135
Msa0511910 MtrunA17_Chr8g0355221 25.918 490 321 14 25 491 16 486 1.63e-34 135
Msa0511910 MtrunA17_Chr2g0294941 28.493 365 217 11 133 473 17 361 2.81e-34 132
Msa0511910 MtrunA17_Chr4g0042891 26.423 492 303 19 24 490 7 464 7.58e-34 133
Msa0511910 MtrunA17_Chr7g0243711 36.449 214 118 6 295 491 104 316 8.01e-34 130
Msa0511910 MtrunA17_Chr1g0165701 25.205 488 324 13 25 491 16 483 8.03e-34 133
Msa0511910 MtrunA17_Chr2g0302961 24.704 506 302 15 22 491 3 465 1.03e-33 132
Msa0511910 MtrunA17_Chr8g0361411 26.694 487 309 18 18 491 2 453 1.51e-33 132
Msa0511910 MtrunA17_Chr1g0196851 25.562 489 267 19 24 472 49 480 1.25e-32 130
Msa0511910 MtrunA17_Chr3g0106251 28.852 305 187 8 197 492 11 294 1.28e-32 126
Msa0511910 MtrunA17_Chr3g0079711 37.500 184 96 4 325 489 3 186 1.75e-32 122
Msa0511910 MtrunA17_Chr4g0042931 26.923 494 296 21 24 490 7 462 3.19e-32 128
Msa0511910 MtrunA17_Chr2g0307961 26.946 501 306 20 16 492 5 469 3.92e-32 128
Msa0511910 MtrunA17_Chr4g0066171 25.253 495 298 13 27 491 24 476 4.02e-32 128
Msa0511910 MtrunA17_Chr7g0241781 27.564 468 260 22 21 472 6 410 6.23e-32 127
Msa0511910 MtrunA17_Chr2g0302991 28.477 302 180 7 211 491 176 462 1.86e-31 126
Msa0511910 MtrunA17_Chr8g0369341 24.449 499 317 16 20 491 3 468 2.58e-31 126
Msa0511910 MtrunA17_Chr8g0336251 27.505 469 277 16 24 465 7 439 2.69e-31 125
Msa0511910 MtrunA17_Chr8g0336321 27.505 469 277 16 24 465 7 439 2.94e-31 125
Msa0511910 MtrunA17_Chr2g0278721 28.486 502 290 23 24 496 517 978 1.09e-29 123
Msa0511910 MtrunA17_Chr2g0278721 25.641 468 295 17 20 468 10 443 1.03e-27 117
Msa0511910 MtrunA17_Chr4g0029131 24.204 471 293 15 24 472 12 440 1.14e-29 122
Msa0511910 MtrunA17_Chr7g0243911 33.040 227 114 7 271 480 4 209 1.56e-29 115
Msa0511910 MtrunA17_Chr8g0367221 27.371 464 276 20 24 462 798 1225 1.58e-29 123
Msa0511910 MtrunA17_Chr8g0367221 27.928 444 249 21 24 442 12 409 2.51e-27 116
Msa0511910 MtrunA17_Chr8g0367221 25.431 464 295 21 24 467 1288 1720 2.10e-24 107
Msa0511910 MtrunA17_Chr1g0207881 42.149 121 64 1 366 480 253 373 1.85e-29 119
Msa0511910 MtrunA17_Chr1g0207881 25.253 297 168 11 24 307 8 263 7.53e-12 67.0
Msa0511910 MtrunA17_Chr4g0029151 23.861 461 307 12 24 472 20 448 4.41e-29 119
Msa0511910 MtrunA17_Chr8g0382021 31.658 199 120 4 298 480 279 477 9.00e-29 119
Msa0511910 MtrunA17_Chr7g0243611 34.513 226 124 8 238 444 76 296 9.17e-29 115
Msa0511910 MtrunA17_Chr6g0466831 25.662 491 305 18 24 495 18 467 1.11e-28 118
Msa0511910 MtrunA17_Chr7g0243811 25.352 426 250 13 36 438 1 381 1.69e-28 116
Msa0511910 MtrunA17_Chr6g0464091 27.294 425 262 17 24 434 18 409 4.70e-28 116
Msa0511910 MtrunA17_Chr2g0302851 26.395 466 280 17 24 468 16 439 2.44e-27 114
Msa0511910 MtrunA17_Chr6g0466841 25.918 490 305 19 24 495 18 467 3.33e-27 114
Msa0511910 MtrunA17_Chr5g0427561 55.952 84 37 0 409 492 2 85 3.32e-26 102
Msa0511910 MtrunA17_Chr7g0232351 27.163 416 230 18 24 409 6 378 1.89e-25 107
Msa0511910 MtrunA17_Chr4g0069611 24.947 473 278 16 24 468 15 438 4.12e-25 107
Msa0511910 MtrunA17_Chr8g0337381 44.628 121 61 2 371 487 3 121 9.80e-25 99.4
Msa0511910 MtrunA17_Chr6g0482061 24.532 481 314 13 24 479 11 467 1.14e-24 107
Msa0511910 MtrunA17_Chr2g0278741 26.271 472 287 18 20 468 92 525 1.49e-24 107
Msa0511910 MtrunA17_Chr4g0040691 23.434 495 309 19 24 492 8 458 1.70e-23 103
Msa0511910 MtrunA17_Chr5g0409591 28.455 246 145 8 240 458 212 453 1.84e-23 103
Msa0511910 MtrunA17_Chr5g0431431 30.078 256 155 7 194 447 110 343 2.18e-23 101
Msa0511910 MtrunA17_Chr6g0454381 33.813 139 92 0 142 280 3 141 4.48e-23 95.1
Msa0511910 MtrunA17_Chr6g0454391 64.062 64 23 0 384 447 11 74 7.18e-23 94.0
Msa0511910 MtrunA17_Chr2g0283041 25.107 466 289 20 24 468 7 433 1.36e-22 100
Msa0511910 MtrunA17_Chr5g0427571 29.870 231 150 6 238 460 42 268 1.24e-21 95.5
Msa0511910 MtrunA17_Chr8g0357361 30.049 203 132 5 234 434 57 251 1.89e-21 94.0
Msa0511910 MtrunA17_Chr3g0092031 31.953 169 105 4 301 463 6 170 3.51e-21 91.7
Msa0511910 MtrunA17_Chr7g0250021 25.648 347 212 11 24 361 12 321 1.91e-20 92.4
Msa0511910 MtrunA17_Chr7g0231631 28.346 254 173 6 242 491 11 259 2.05e-20 91.3
Msa0511910 MtrunA17_Chr4g0040711 24.171 422 275 14 24 434 8 395 2.73e-20 93.6
Msa0511910 MtrunA17_Chr4g0066141 35.669 157 84 4 352 491 195 351 9.11e-20 90.9
Msa0511910 MtrunA17_Chr4g0039881 29.787 235 145 7 242 468 193 415 1.11e-18 88.6
Msa0511910 MtrunA17_Chr2g0319791 24.516 465 296 21 14 462 4 429 1.80e-18 87.8
Msa0511910 MtrunA17_Chr2g0319801 22.976 457 299 13 24 462 8 429 2.13e-18 87.8
Msa0511910 MtrunA17_Chr2g0319731 23.441 465 287 16 24 462 25 446 4.30e-18 87.0
Msa0511910 MtrunA17_Chr4g0029161 21.702 470 278 15 24 472 12 412 7.85e-18 85.9
Msa0511910 MtrunA17_Chr2g0319751 23.307 502 305 21 24 494 485 937 6.13e-17 84.3
Msa0511910 MtrunA17_Chr2g0319751 23.353 501 280 22 24 493 8 435 3.63e-15 78.6
Msa0511910 MtrunA17_Chr2g0319761 28.986 207 137 5 295 492 253 458 7.32e-17 82.8
Msa0511910 MtrunA17_Chr7g0243731 47.059 68 35 1 368 434 6 73 8.41e-15 69.7
Msa0511910 MtrunA17_Chr1g0207911 25.301 249 169 7 25 269 9 244 2.47e-13 70.1
Msa0511910 MtrunA17_Chr2g0321331 29.012 162 90 5 309 462 94 238 1.72e-11 64.7
Msa0511910 MtrunA17_Chr7g0267931 67.568 37 11 1 29 64 25 61 7.86e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0511910 AT1G22380.1 51.681 476 228 2 18 492 7 481 0.0 537
Msa0511910 AT1G22360.1 50.000 474 235 2 20 492 6 478 0.0 523
Msa0511910 AT1G22340.1 48.536 478 245 1 19 495 8 485 0.0 517
Msa0511910 AT1G22400.1 49.790 476 236 3 19 492 8 482 0.0 517
Msa0511910 AT1G22370.2 50.630 476 228 3 18 492 7 476 4.45e-179 511
Msa0511910 AT1G22360.2 48.523 474 230 3 20 492 6 466 8.51e-175 500
Msa0511910 AT1G78270.1 46.751 477 250 4 18 492 7 481 1.95e-162 469
Msa0511910 AT1G22370.1 49.671 304 151 2 190 492 4 306 1.06e-102 310
Msa0511910 AT3G46660.1 37.526 477 255 13 25 491 15 458 5.81e-86 272
Msa0511910 AT5G59590.1 34.526 475 275 11 21 491 7 449 3.32e-84 267
Msa0511910 AT3G46690.1 36.555 476 265 11 21 491 6 449 5.71e-84 267
Msa0511910 AT2G36970.1 31.762 488 298 9 18 491 4 470 7.85e-84 268
Msa0511910 AT3G11340.1 33.962 477 279 9 18 492 3 445 1.08e-83 266
Msa0511910 AT5G59580.1 34.874 476 277 10 22 495 7 451 2.21e-83 265
Msa0511910 AT3G46650.1 35.368 475 252 11 22 493 8 430 3.10e-83 265
Msa0511910 AT3G46670.1 35.220 477 265 13 24 494 9 447 3.72e-83 265
Msa0511910 AT5G38010.1 34.447 479 278 9 19 491 5 453 6.64e-83 264
Msa0511910 AT5G38040.1 35.054 465 264 11 32 491 18 449 2.95e-82 262
Msa0511910 AT3G46680.1 35.095 473 270 12 21 488 6 446 8.12e-82 261
Msa0511910 AT3G21560.1 31.944 504 290 14 8 491 2 472 4.52e-78 253
Msa0511910 AT5G05880.1 32.484 471 279 11 24 488 8 445 6.92e-78 251
Msa0511910 AT3G46700.1 33.827 473 277 10 21 491 6 444 6.09e-76 246
Msa0511910 AT5G05890.1 33.053 475 275 11 24 488 8 449 5.16e-75 244
Msa0511910 AT4G15500.1 31.557 488 292 12 19 492 4 463 6.19e-74 241
Msa0511910 AT3G46720.1 32.985 479 273 11 19 491 4 440 1.45e-72 237
Msa0511910 AT5G05900.1 30.947 475 280 11 24 488 8 444 5.71e-72 236
Msa0511910 AT4G15480.1 31.687 486 288 14 24 491 19 478 9.31e-72 236
Msa0511910 AT2G28080.1 32.278 474 289 10 28 492 22 472 1.23e-71 236
Msa0511910 AT5G05870.1 31.723 476 288 11 24 491 8 454 1.50e-71 235
Msa0511910 AT4G15490.1 32.460 496 280 14 20 492 4 467 1.34e-70 233
Msa0511910 AT3G55710.1 31.568 491 279 16 24 496 8 459 1.54e-69 229
Msa0511910 AT2G26480.1 32.000 475 287 11 21 492 5 446 1.42e-68 227
Msa0511910 AT5G05860.1 32.278 474 282 10 24 492 9 448 4.50e-68 225
Msa0511910 AT3G55700.1 29.814 483 294 12 24 496 8 455 1.33e-67 224
Msa0511910 AT2G31750.1 30.228 483 294 14 22 493 6 456 1.05e-63 214
Msa0511910 AT2G31750.2 30.228 483 294 14 22 493 6 456 3.26e-63 214
Msa0511910 AT1G05680.1 30.753 465 285 11 24 480 6 441 7.74e-62 209
Msa0511910 AT1G05675.1 29.175 473 298 11 24 488 6 449 3.65e-61 207
Msa0511910 AT3G02100.1 29.897 485 288 15 22 489 11 460 5.31e-61 207
Msa0511910 AT2G43820.1 29.046 482 292 13 21 491 4 446 9.27e-61 206
Msa0511910 AT2G31790.1 30.380 474 289 12 18 480 2 445 1.03e-59 203
Msa0511910 AT2G43840.1 27.801 482 296 13 22 491 5 446 9.81e-58 198
Msa0511910 AT2G43840.2 27.801 482 296 13 22 491 5 446 1.21e-57 198
Msa0511910 AT2G30140.1 30.242 496 277 16 20 495 9 455 6.29e-57 196
Msa0511910 AT2G30140.2 30.444 496 275 16 20 495 9 454 6.68e-57 196
Msa0511910 AT2G36750.1 31.515 495 295 13 24 493 10 485 3.97e-55 192
Msa0511910 AT5G17050.1 26.240 484 322 11 16 493 4 458 5.66e-55 191
Msa0511910 AT1G05560.1 27.143 490 306 13 23 497 4 457 1.06e-53 188
Msa0511910 AT4G34131.1 30.078 512 285 16 16 491 5 479 1.53e-53 187
Msa0511910 AT2G36800.1 30.417 503 304 17 18 493 6 489 1.76e-53 188
Msa0511910 AT1G05560.2 27.143 490 306 13 23 497 54 507 3.06e-53 188
Msa0511910 AT1G24100.1 29.209 493 283 17 22 491 9 458 3.62e-53 186
Msa0511910 AT2G15480.1 28.629 496 309 11 20 491 6 480 1.41e-52 185
Msa0511910 AT2G30150.2 29.668 482 283 14 24 491 13 452 1.70e-52 184
Msa0511910 AT4G15550.1 27.621 496 296 14 23 490 12 472 1.94e-52 184
Msa0511910 AT4G01070.1 28.144 501 274 14 19 480 3 456 6.74e-52 183
Msa0511910 AT2G15490.3 28.370 497 311 11 19 491 2 477 8.72e-52 183
Msa0511910 AT1G05530.1 26.572 493 300 14 22 492 3 455 1.39e-51 182
Msa0511910 AT2G36770.1 29.365 504 311 14 18 494 6 491 2.81e-51 182
Msa0511910 AT5G17040.1 26.458 480 298 11 24 492 5 440 3.27e-51 181
Msa0511910 AT4G14090.1 30.123 488 280 18 21 490 10 454 4.89e-51 180
Msa0511910 AT2G15480.2 28.261 506 308 12 20 491 6 490 9.86e-51 180
Msa0511910 AT2G15490.1 28.200 500 311 12 19 491 2 480 1.30e-50 180
Msa0511910 AT2G36780.1 29.980 507 302 16 17 493 7 490 1.50e-50 180
Msa0511910 AT2G30150.1 29.289 478 282 14 28 491 1 436 1.87e-50 178
Msa0511910 AT1G30530.1 25.873 487 319 12 10 492 3 451 4.67e-50 177
Msa0511910 AT2G23250.1 28.512 477 287 18 27 491 1 435 2.11e-49 176
Msa0511910 AT3G53160.1 28.629 496 313 14 24 495 8 486 3.13e-49 176
Msa0511910 AT5G26310.1 28.794 514 275 20 19 490 2 466 3.24e-49 176
Msa0511910 AT5G17040.2 31.596 307 193 4 188 492 47 338 1.13e-48 171
Msa0511910 AT5G66690.1 27.811 507 289 17 19 490 2 466 1.44e-48 174
Msa0511910 AT5G37950.1 33.158 380 208 11 39 409 1 343 2.32e-48 170
Msa0511910 AT2G23260.1 26.804 485 309 14 18 491 4 453 6.27e-48 172
Msa0511910 AT5G37950.2 32.620 374 212 9 39 409 1 337 1.30e-47 168
Msa0511910 AT2G36760.1 28.800 500 305 16 24 494 14 491 2.12e-47 171
Msa0511910 AT4G34135.1 29.020 510 291 13 19 491 6 481 2.64e-47 171
Msa0511910 AT1G10400.1 30.800 500 282 21 21 494 4 465 2.03e-46 168
Msa0511910 AT2G36790.1 30.629 493 303 14 24 493 13 489 2.62e-46 168
Msa0511910 AT3G22250.1 27.447 470 284 15 20 464 4 441 1.79e-45 166
Msa0511910 AT4G36770.1 28.274 481 281 17 24 476 4 448 1.03e-44 163
Msa0511910 AT1G01420.1 28.033 478 277 16 23 471 7 446 1.96e-44 163
Msa0511910 AT1G01420.2 28.033 478 277 16 23 471 10 449 2.03e-44 163
Msa0511910 AT5G17030.1 28.477 302 201 3 193 493 170 457 1.78e-43 160
Msa0511910 AT2G16890.2 28.740 508 273 23 24 491 9 467 3.30e-43 159
Msa0511910 AT4G34138.1 26.430 507 299 13 22 491 9 478 8.65e-43 159
Msa0511910 AT1G01390.1 28.024 496 299 15 18 488 2 464 1.63e-42 158
Msa0511910 AT1G01390.2 28.455 492 294 15 18 484 19 477 2.60e-42 157
Msa0511910 AT5G14860.1 27.470 506 299 17 20 491 4 475 2.82e-42 157
Msa0511910 AT3G53150.1 25.825 515 326 12 18 494 16 512 3.71e-42 157
Msa0511910 AT3G50740.1 27.586 522 277 20 22 493 5 475 4.90e-42 157
Msa0511910 AT2G29710.1 25.873 487 321 15 21 492 2 463 1.16e-40 152
Msa0511910 AT2G18570.1 26.471 510 285 18 22 489 3 464 5.07e-40 150
Msa0511910 AT3G16520.3 32.087 321 191 10 180 489 153 457 1.09e-39 149
Msa0511910 AT5G03490.1 29.134 508 266 23 19 491 14 462 1.16e-38 147
Msa0511910 AT2G29730.1 24.017 483 329 14 24 492 5 463 1.62e-37 144
Msa0511910 AT3G16520.1 32.268 313 183 10 180 477 153 451 1.69e-37 143
Msa0511910 AT3G16520.2 32.862 283 166 8 180 451 153 422 1.98e-37 143
Msa0511910 AT3G21790.1 26.733 505 307 17 22 491 2 478 4.11e-36 140
Msa0511910 AT1G51210.1 27.511 458 278 13 20 465 16 431 7.10e-36 138
Msa0511910 AT2G18560.1 30.592 304 160 10 219 489 89 374 8.60e-36 137
Msa0511910 AT1G73880.1 26.132 486 314 14 22 492 12 467 1.25e-34 135
Msa0511910 AT5G65550.1 26.866 469 287 16 22 469 7 440 1.26e-34 135
Msa0511910 AT3G21780.1 25.889 506 310 19 22 496 2 473 1.08e-33 133
Msa0511910 AT1G07250.1 25.391 512 309 18 21 496 3 477 4.02e-33 131
Msa0511910 AT1G07240.1 29.889 271 162 7 238 492 218 476 9.12e-33 130
Msa0511910 AT3G21800.1 32.028 281 155 8 240 496 212 480 1.25e-32 130
Msa0511910 AT3G21750.1 23.031 508 318 14 22 494 2 471 2.82e-32 129
Msa0511910 AT3G21760.1 24.554 505 320 16 22 491 2 480 2.90e-32 129
Msa0511910 AT4G15260.1 28.179 291 176 5 227 496 81 359 3.44e-32 127
Msa0511910 AT2G16890.3 27.174 460 247 22 24 444 9 419 4.62e-32 127
Msa0511910 AT5G49690.1 27.391 460 272 20 24 463 10 427 4.64e-32 128
Msa0511910 AT2G29740.1 30.078 256 154 7 238 481 222 464 2.20e-31 126
Msa0511910 AT1G07260.1 29.104 268 165 6 238 492 217 472 2.58e-31 126
Msa0511910 AT4G15280.1 28.920 287 163 8 234 494 205 476 5.60e-31 125
Msa0511910 AT5G12890.1 26.829 492 294 20 24 480 10 470 5.62e-31 125
Msa0511910 AT4G15280.2 28.920 287 163 8 234 494 237 508 7.37e-31 125
Msa0511910 AT2G29750.1 24.319 514 307 18 24 497 8 479 2.02e-30 124
Msa0511910 AT5G54010.1 25.000 496 299 21 22 494 4 449 2.08e-27 115
Msa0511910 AT4G27560.1 23.935 493 303 17 22 492 5 447 1.22e-25 109
Msa0511910 AT4G27570.1 24.034 466 289 15 22 468 5 424 1.52e-25 109
Msa0511910 AT2G22590.1 26.539 471 284 18 22 467 13 446 3.38e-25 108
Msa0511910 AT1G64910.1 25.647 464 269 18 21 462 3 412 5.75e-24 104
Msa0511910 AT5G53990.1 25.629 437 253 16 21 442 3 382 6.86e-24 104
Msa0511910 AT3G29630.1 24.766 428 272 15 22 444 4 386 5.12e-23 102
Msa0511910 AT4G34135.2 27.479 353 198 10 19 345 6 326 3.91e-22 97.8
Msa0511910 AT5G54060.1 24.197 467 304 14 25 473 14 448 1.61e-21 97.8
Msa0511910 AT1G64920.1 23.577 492 309 20 20 490 2 447 3.01e-21 96.7
Msa0511910 AT3G29630.2 23.888 427 251 13 22 444 4 360 4.37e-21 95.9
Msa0511910 AT1G06000.1 26.259 278 184 8 227 491 164 433 3.97e-20 93.2
Msa0511910 AT4G09500.2 22.845 464 292 17 22 468 4 418 6.24e-20 92.8
Msa0511910 AT2G22930.1 22.198 464 291 17 24 468 6 418 8.62e-19 89.4
Msa0511910 AT1G50580.1 23.026 456 290 16 22 462 4 413 5.33e-18 86.7
Msa0511910 AT4G09500.1 27.429 175 120 3 301 468 219 393 1.98e-17 84.7
Msa0511910 AT4G01070.2 23.177 384 214 12 19 368 3 339 2.57e-16 80.9

Find 114 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAAAATGGTTGAGTAAA+TGG 0.151034 3_4:-61612398 Msa0511910:CDS
TTATGCAACACTTGGAAAAT+AGG 0.227176 3_4:-61612021 Msa0511910:CDS
CATGTTGACTATTCTGAATT+TGG 0.236044 3_4:-61611707 Msa0511910:three_prime_UTR
TCTTCACCCATTACTATATC+TGG 0.244649 3_4:+61612255 None:intergenic
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_4:+61614493 None:intergenic
GATTGCTCATTTGATTGATT+TGG 0.290032 3_4:-61611541 Msa0511910:three_prime_UTR
TGGAAGAGTGGCTAAAGATT+TGG 0.298779 3_4:-61614332 Msa0511910:CDS
CTTGGAGCTGACTTTGTTAA+GGG 0.310099 3_4:-61614556 Msa0511910:CDS
ATGACTCAGAATGCATAAAA+TGG 0.312996 3_4:-61612410 Msa0511910:CDS
GAAATGTAATAGATTTGTTT+TGG 0.317995 3_4:-61611519 Msa0511910:three_prime_UTR
ATTTATTGATTATGTTCCTT+TGG 0.324898 3_4:-61611563 Msa0511910:three_prime_UTR
CAGGTCTGCCTACTATTTGT+TGG 0.330319 3_4:-61612080 Msa0511910:CDS
ACACTTGAAGCAATTTCTTC+AGG 0.336883 3_4:-61612099 Msa0511910:CDS
GGGCCAATGCTATATATGTT+AGG 0.338040 3_4:+61612507 None:intergenic
CTAATACAACATGAGGCTTT+TGG 0.339567 3_4:+61614701 None:intergenic
TCTTGGAGCTGACTTTGTTA+AGG 0.346942 3_4:-61614557 Msa0511910:CDS
ACCATTACAACGTAGGAGTT+TGG 0.354802 3_4:+61614633 None:intergenic
GAAATGATGGAAGGAGAAAA+AGG 0.359746 3_4:-61611946 Msa0511910:CDS
AGCTTCTACTTGTGGGTTTG+TGG 0.362012 3_4:-61614284 Msa0511910:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_4:-61614352 Msa0511910:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_4:+61614373 None:intergenic
AACACATTTGAAGAATTAGA+AGG 0.379838 3_4:-61612561 Msa0511910:CDS
ATCACTTGAAAGAATTTGCT+TGG 0.385257 3_4:-61612320 Msa0511910:CDS
ATGGTCTCAAATTGAAAATC+AGG 0.386462 3_4:+61614529 None:intergenic
TATTTGAGTTATATTATAAT+CGG 0.388927 3_4:-61611803 Msa0511910:exon
GGAAGAGTGGCTAAAGATTT+GGG 0.399411 3_4:-61614331 Msa0511910:CDS
TCGGTACTATATATTAATTA+TGG 0.399615 3_4:-61612366 Msa0511910:CDS
TCACTTGAAAGAATTTGCTT+GGG 0.404835 3_4:-61612319 Msa0511910:CDS
CCTTGGATACAAGTTTAGAT+TGG 0.405206 3_4:-61612716 Msa0511910:CDS
GTGAATCCCTTGACACCCTT+AGG 0.405921 3_4:-61612539 Msa0511910:CDS
ACAAGTTTAGATTGGATCTC+TGG 0.407043 3_4:-61612708 Msa0511910:CDS
AATTCCAACCACAATGAGTT+AGG 0.409400 3_4:+61612124 None:intergenic
GCTTCTACTTGTGGGTTTGT+GGG 0.414047 3_4:-61614283 Msa0511910:CDS
CATAAAATGGTTGAGTAAAT+GGG 0.417737 3_4:-61612397 Msa0511910:CDS
CAGTTTAATTTACCTTTGAA+TGG 0.422394 3_4:+61614220 None:intergenic
GCAAAACCGTATTCTTTCTC+AGG 0.431385 3_4:+61612459 None:intergenic
TGAATTCAACCACAAACGTT+TGG 0.432420 3_4:-61614587 Msa0511910:CDS
CAATGTTGTGTGATTCAACT+AGG 0.436379 3_4:-61614459 Msa0511910:CDS
AAATTAACTATGATGTGAAA+AGG 0.437634 3_4:-61611993 Msa0511910:CDS
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_4:+61614505 None:intergenic
AAACGTTTGGTAAAGTCTCT+TGG 0.443702 3_4:-61614574 Msa0511910:CDS
TATGGACAGCTTCTACTTGT+GGG 0.455987 3_4:-61614291 Msa0511910:CDS
GCCAAACTCCTACGTTGTAA+TGG 0.460605 3_4:-61614634 Msa0511910:CDS
CTAGATGAAGTCAAGGATAG+AGG 0.462415 3_4:-61612207 Msa0511910:CDS
AATTAACTATGATGTGAAAA+GGG 0.466340 3_4:-61611992 Msa0511910:CDS
GGCCAATGCTATATATGTTA+GGG 0.467636 3_4:+61612508 None:intergenic
ATGAGGCCAGATATAGTAAT+GGG 0.468666 3_4:-61612261 Msa0511910:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_4:+61612057 None:intergenic
CTTGCTCATCCATCAGTTGG+AGG 0.473224 3_4:-61612150 Msa0511910:CDS
CTGAGCAACAAACAAATTGT+CGG 0.473435 3_4:-61612047 Msa0511910:CDS
GAGACTTTACCAAACGTTTG+TGG 0.473697 3_4:+61614578 None:intergenic
CAGTGTTCACAAAGGTTATG+TGG 0.477175 3_4:+61614608 None:intergenic
AAGAAAGGCCAACAAATAGT+AGG 0.487158 3_4:+61612072 None:intergenic
ACATGACCCTGTGCTGGAAA+TGG 0.488947 3_4:+61614676 None:intergenic
ATTAGTACCATTTCCAGCAC+AGG 0.496257 3_4:-61614683 Msa0511910:CDS
GTCGGTATTTATGCAACACT+TGG 0.498218 3_4:-61612029 Msa0511910:CDS
GTCAACATGACATTGATTGA+TGG 0.501093 3_4:+61611721 None:intergenic
TGAATCCCTTGACACCCTTA+GGG 0.501956 3_4:-61612538 Msa0511910:CDS
ATACAAGTAACTGGAATATG+AGG 0.502466 3_4:+61614382 None:intergenic
AGAACTTGTGATGGAAATGA+TGG 0.507214 3_4:-61611959 Msa0511910:CDS
AACCCTAACATATATAGCAT+TGG 0.514549 3_4:-61612510 Msa0511910:CDS
GAGTAAATGGGAACCTTGCT+CGG 0.515019 3_4:-61612385 Msa0511910:CDS
CTGATGGATGAGCAAGCACT+TGG 0.515271 3_4:+61612157 None:intergenic
CCAATCTAAACTTGTATCCA+AGG 0.516376 3_4:+61612716 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3_4:+61614649 None:intergenic
GGGTTCACATGACCCTGTGC+TGG 0.518569 3_4:+61614670 None:intergenic
ATTGGCCCACTTCACATGCT+TGG 0.521488 3_4:-61612492 Msa0511910:CDS
TCAGTGACTCTGATGAAGCT+TGG 0.522849 3_4:+61612657 None:intergenic
CTAGTTGAATCACACAACAT+TGG 0.524951 3_4:+61614460 None:intergenic
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_4:-61614232 Msa0511910:intron
ACAAAATTGTGTGAGATCAT+CGG 0.529236 3_4:-61612595 Msa0511910:CDS
TGTGGGATATTTGCAATTCG+AGG 0.531454 3_4:-61614266 Msa0511910:CDS
AGAGATGAGACAAAACTGCT+TGG 0.532493 3_4:-61611920 Msa0511910:CDS
GCATTCGAGAGATACAACTA+TGG 0.532990 3_4:-61614309 Msa0511910:CDS
CAACACTTGGAAAATAGGAA+TGG 0.534434 3_4:-61612016 Msa0511910:CDS
TGACTCTGATGAAGCTTGGA+AGG 0.534999 3_4:+61612661 None:intergenic
TTCGAGGAGCTTGTCAAAAG+AGG 0.537426 3_4:-61614250 Msa0511910:CDS
AGAGATAACAGAACTTGTGA+TGG 0.539853 3_4:-61611968 Msa0511910:CDS
CTATGGACAGCTTCTACTTG+TGG 0.540648 3_4:-61614292 Msa0511910:CDS
GGTTCCTAACTCATTGTGGT+TGG 0.541326 3_4:-61612128 Msa0511910:CDS
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_4:+61614510 None:intergenic
TGGCTATGACTATGAGGAGG+TGG 0.543980 3_4:+61614721 None:intergenic
GCCTACCAAGCATGTGAAGT+GGG 0.545551 3_4:+61612487 None:intergenic
AGCTACAGATGCTACTAATG+TGG 0.548442 3_4:-61611884 Msa0511910:CDS
CACTTGAAAGAATTTGCTTG+GGG 0.550965 3_4:-61612318 Msa0511910:CDS
GTGCTTGCTCATCCATCAGT+TGG 0.553399 3_4:-61612153 Msa0511910:CDS
TTTAGCCCTAAGGGTGTCAA+GGG 0.554175 3_4:+61612533 None:intergenic
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_4:-61614370 Msa0511910:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3_4:+61614650 None:intergenic
TTGCTCATCCATCAGTTGGA+GGG 0.557925 3_4:-61612149 Msa0511910:CDS
GTTAGGAACCCTCCAACTGA+TGG 0.561564 3_4:+61612141 None:intergenic
GGAGGGTTCCTAACTCATTG+TGG 0.564364 3_4:-61612132 Msa0511910:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.569942 3_4:-61614344 Msa0511910:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_4:-61614520 Msa0511910:CDS
TATTGTGGTTCTTGTTGACA+AGG 0.574072 3_4:-61611609 Msa0511910:three_prime_UTR
ACTTGTATCCAAGGTGCCAT+CGG 0.578172 3_4:+61612725 None:intergenic
CTATGACTATGAGGAGGTGG+AGG 0.581902 3_4:+61614724 None:intergenic
GCTACAGATGCTACTAATGT+GGG 0.582080 3_4:-61611883 Msa0511910:CDS
AATGAGGCCAGATATAGTAA+TGG 0.584372 3_4:-61612262 Msa0511910:CDS
GCCCACTTCACATGCTTGGT+AGG 0.589057 3_4:-61612488 Msa0511910:CDS
TTAATCACGAGCTCTTTGAA+AGG 0.592339 3_4:+61614421 None:intergenic
TTAATATATAGTACCGAGCA+AGG 0.597770 3_4:+61612372 None:intergenic
ATAGAGGATACATAACAAGT+TGG 0.603705 3_4:-61612191 Msa0511910:CDS
TGCCTACCAAGCATGTGAAG+TGG 0.610099 3_4:+61612486 None:intergenic
AATGGTACTAATACAACATG+AGG 0.610124 3_4:+61614694 None:intergenic
TGAGACAAAACTGCTTGGAG+TGG 0.611958 3_4:-61611915 Msa0511910:CDS
GTATGGACAGGAAAATATTG+TGG 0.616787 3_4:-61611624 Msa0511910:three_prime_UTR
ACTTCATCTAGAAAATCTTG+TGG 0.630695 3_4:+61612219 None:intergenic
CAATCAAATGAGCAATCCAA+AGG 0.640979 3_4:+61611547 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.648111 3_4:-61611955 Msa0511910:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_4:+61614600 None:intergenic
TTAGTACCATTTCCAGCACA+GGG 0.662050 3_4:-61614682 Msa0511910:CDS
TGTGGAAACCATTACAACGT+AGG 0.697450 3_4:+61614626 None:intergenic
ACAGATGCTACTAATGTGGG+AGG 0.700783 3_4:-61611880 Msa0511910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAATGTATTTAAAAAG+TGG + chr3_4:61612189-61612208 None:intergenic 10.0%
!! TAAAAAAAAAAATATCAGTT+GGG + chr3_4:61612991-61613010 None:intergenic 10.0%
!!! ATTCTAAAATAAAGAAATAA+AGG + chr3_4:61613124-61613143 None:intergenic 10.0%
!!! TATTTGAGTTATATTATAAT+CGG - chr3_4:61614460-61614479 Msa0511910:CDS 10.0%
!!! TTATTTTTTCTAAAGAGTAT+TGG - chr3_4:61612348-61612367 Msa0511910:CDS 15.0%
!!! TTATTTTTTGGAATATACTT+AGG + chr3_4:61612396-61612415 None:intergenic 15.0%
!! TTATACATTCATAATATTCA+TGG - chr3_4:61612594-61612613 Msa0511910:CDS 15.0%
!! GTAAAAAAAAAAATATCAGT+TGG + chr3_4:61612992-61613011 None:intergenic 15.0%
!! GAAAATTATGAAGAAAAAAA+AGG + chr3_4:61614615-61614634 None:intergenic 15.0%
!! TTAATGCGATATGAATATTT+AGG - chr3_4:61613091-61613110 Msa0511910:intron 20.0%
!! ATTAAAATCAATACAAGCAA+AGG + chr3_4:61613301-61613320 None:intergenic 20.0%
!! TCGGTACTATATATTAATTA+TGG - chr3_4:61613897-61613916 Msa0511910:intron 20.0%
!!! ATAGTAAGTTACCATTTTTA+TGG - chr3_4:61613976-61613995 Msa0511910:intron 20.0%
!! AAATTAACTATGATGTGAAA+AGG - chr3_4:61614270-61614289 Msa0511910:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG - chr3_4:61614271-61614290 Msa0511910:CDS 20.0%
!!! ATTTATTGATTATGTTCCTT+TGG - chr3_4:61614700-61614719 Msa0511910:CDS 20.0%
!!! GAAATGTAATAGATTTGTTT+TGG - chr3_4:61614744-61614763 Msa0511910:CDS 20.0%
!! CAGTTTAATTTACCTTTGAA+TGG + chr3_4:61612046-61612065 None:intergenic 25.0%
!! GAATATACTTAGGTACTTTT+GGG + chr3_4:61612386-61612405 None:intergenic 25.0%
!!! CTACTTATTGACTCATTTAT+TGG + chr3_4:61612544-61612563 None:intergenic 25.0%
! AGTCAATAAGTAGTTCAAAT+CGG - chr3_4:61612551-61612570 Msa0511910:CDS 25.0%
! ATTTGACGCATTTAATACAA+GGG + chr3_4:61612644-61612663 None:intergenic 25.0%
! AATTTGACGCATTTAATACA+AGG + chr3_4:61612645-61612664 None:intergenic 25.0%
!! TTTAGAATTAGAGTTAGTCA+AGG + chr3_4:61612795-61612814 None:intergenic 25.0%
!!! ATTAGTTTAGCTACTTTTCT+TGG + chr3_4:61612818-61612837 None:intergenic 25.0%
!!! CACTGTTTAGGTATTTTTTT+TGG - chr3_4:61612948-61612967 Msa0511910:intron 25.0%
!!! TATTTTTTTTGGTACAAGAG+AGG - chr3_4:61612959-61612978 Msa0511910:intron 25.0%
!!! ATTTTTTTTGGTACAAGAGA+GGG - chr3_4:61612960-61612979 Msa0511910:intron 25.0%
!! TTACACTTTAAAAACTATCC+AGG + chr3_4:61613340-61613359 None:intergenic 25.0%
! AACACATTTGAAGAATTAGA+AGG - chr3_4:61613702-61613721 Msa0511910:intron 25.0%
! CATAAAATGGTTGAGTAAAT+GGG - chr3_4:61613866-61613885 Msa0511910:intron 25.0%
!!! TACCATTTTTATGGATAATG+AGG - chr3_4:61613985-61614004 Msa0511910:intron 25.0%
!! CTTCATAATTTTCAACTGTA+TGG - chr3_4:61614622-61614641 Msa0511910:CDS 25.0%
AATGGTACTAATACAACATG+AGG + chr3_4:61611572-61611591 None:intergenic 30.0%
ATGGTCTCAAATTGAAAATC+AGG + chr3_4:61611737-61611756 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG + chr3_4:61611884-61611903 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG + chr3_4:61611893-61611912 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG - chr3_4:61611893-61611912 Msa0511910:CDS 30.0%
! GGAATATACTTAGGTACTTT+TGG + chr3_4:61612387-61612406 None:intergenic 30.0%
TTAACGATTAGAATATGCCT+CGG + chr3_4:61612917-61612936 None:intergenic 30.0%
!!! ACTATTTTTGGAGCTTGATA+TGG - chr3_4:61613177-61613196 Msa0511910:intron 30.0%
AAATGTACATCGCAGAAATT+AGG + chr3_4:61613247-61613266 None:intergenic 30.0%
ACAAAATTGTGTGAGATCAT+CGG - chr3_4:61613668-61613687 Msa0511910:intron 30.0%
AACCCTAACATATATAGCAT+TGG - chr3_4:61613753-61613772 Msa0511910:intron 30.0%
! CATTTTCCTGAGAAAGAATA+CGG - chr3_4:61613798-61613817 Msa0511910:intron 30.0%
ATGACTCAGAATGCATAAAA+TGG - chr3_4:61613853-61613872 Msa0511910:intron 30.0%
GCATAAAATGGTTGAGTAAA+TGG - chr3_4:61613865-61613884 Msa0511910:intron 30.0%
! TTAATATATAGTACCGAGCA+AGG + chr3_4:61613894-61613913 None:intergenic 30.0%
! ATCACTTGAAAGAATTTGCT+TGG - chr3_4:61613943-61613962 Msa0511910:intron 30.0%
! TCACTTGAAAGAATTTGCTT+GGG - chr3_4:61613944-61613963 Msa0511910:intron 30.0%
ACTTCATCTAGAAAATCTTG+TGG + chr3_4:61614047-61614066 None:intergenic 30.0%
! AGATTTTCTAGATGAAGTCA+AGG - chr3_4:61614049-61614068 Msa0511910:intron 30.0%
ATAGAGGATACATAACAAGT+TGG - chr3_4:61614072-61614091 Msa0511910:intron 30.0%
TTATGCAACACTTGGAAAAT+AGG - chr3_4:61614242-61614261 Msa0511910:CDS 30.0%
! CATGTTGACTATTCTGAATT+TGG - chr3_4:61614556-61614575 Msa0511910:CDS 30.0%
! TAATTTTCAACTGTATGGAC+AGG - chr3_4:61614627-61614646 Msa0511910:CDS 30.0%
GATTGCTCATTTGATTGATT+TGG - chr3_4:61614722-61614741 Msa0511910:CDS 30.0%
! CTAATACAACATGAGGCTTT+TGG + chr3_4:61611565-61611584 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG + chr3_4:61611666-61611685 None:intergenic 35.0%
TGAATTCAACCACAAACGTT+TGG - chr3_4:61611676-61611695 Msa0511910:three_prime_UTR 35.0%
AAACGTTTGGTAAAGTCTCT+TGG - chr3_4:61611689-61611708 Msa0511910:three_prime_UTR 35.0%
GTTGCATCTTTATCTGATTC+TGG + chr3_4:61611773-61611792 None:intergenic 35.0%
CTAGTTGAATCACACAACAT+TGG + chr3_4:61611806-61611825 None:intergenic 35.0%
CAATGTTGTGTGATTCAACT+AGG - chr3_4:61611804-61611823 Msa0511910:exon 35.0%
TTAATCACGAGCTCTTTGAA+AGG + chr3_4:61611845-61611864 None:intergenic 35.0%
AGAGGAATTCTTCCATTCAA+AGG - chr3_4:61612031-61612050 Msa0511910:CDS 35.0%
TATGAATCTGACGTACAGAT+CGG + chr3_4:61612258-61612277 None:intergenic 35.0%
!! TAAGTAGTGGGCCAATAAAT+GGG - chr3_4:61612501-61612520 Msa0511910:CDS 35.0%
AGTTCAAATCGGATTCTTTG+TGG - chr3_4:61612562-61612581 Msa0511910:CDS 35.0%
!! ATTTTGACGAATGCCAATCA+TGG - chr3_4:61612662-61612681 Msa0511910:CDS 35.0%
! ACTACATTTTTGTTGGTCCT+TGG + chr3_4:61612711-61612730 None:intergenic 35.0%
AAGGACCAACAAAAATGTAG+TGG - chr3_4:61612710-61612729 Msa0511910:CDS 35.0%
AGGACCAACAAAAATGTAGT+GGG - chr3_4:61612711-61612730 Msa0511910:CDS 35.0%
ATGTTAGCAAACTTCTCCAT+CGG - chr3_4:61612836-61612855 Msa0511910:intron 35.0%
TAACGTTATGATTCATCCGA+TGG + chr3_4:61612855-61612874 None:intergenic 35.0%
! GATGAAAATTTTGTTGCCGA+TGG - chr3_4:61613522-61613541 Msa0511910:intron 35.0%
CCAATCTAAACTTGTATCCA+AGG + chr3_4:61613550-61613569 None:intergenic 35.0%
CCTTGGATACAAGTTTAGAT+TGG - chr3_4:61613547-61613566 Msa0511910:intron 35.0%
ACAAGTTTAGATTGGATCTC+TGG - chr3_4:61613555-61613574 Msa0511910:intron 35.0%
! GATGATCTCACACAATTTTG+TGG + chr3_4:61613669-61613688 None:intergenic 35.0%
GGCCAATGCTATATATGTTA+GGG + chr3_4:61613758-61613777 None:intergenic 35.0%
! CACTTGAAAGAATTTGCTTG+GGG - chr3_4:61613945-61613964 Msa0511910:intron 35.0%
GGCCTCATTATCCATAAAAA+TGG + chr3_4:61613990-61614009 None:intergenic 35.0%
AATGAGGCCAGATATAGTAA+TGG - chr3_4:61614001-61614020 Msa0511910:intron 35.0%
ATGAGGCCAGATATAGTAAT+GGG - chr3_4:61614002-61614021 Msa0511910:intron 35.0%
TCTTCACCCATTACTATATC+TGG + chr3_4:61614011-61614030 None:intergenic 35.0%
AATTCCAACCACAATGAGTT+AGG + chr3_4:61614142-61614161 None:intergenic 35.0%
ACACTTGAAGCAATTTCTTC+AGG - chr3_4:61614164-61614183 Msa0511910:intron 35.0%
AAGAAAGGCCAACAAATAGT+AGG + chr3_4:61614194-61614213 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+CGG - chr3_4:61614216-61614235 Msa0511910:intron 35.0%
CAACACTTGGAAAATAGGAA+TGG - chr3_4:61614247-61614266 Msa0511910:CDS 35.0%
AGAGATAACAGAACTTGTGA+TGG - chr3_4:61614295-61614314 Msa0511910:CDS 35.0%
! AGAACTTGTGATGGAAATGA+TGG - chr3_4:61614304-61614323 Msa0511910:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+AGG - chr3_4:61614317-61614336 Msa0511910:CDS 35.0%
! GTCAACATGACATTGATTGA+TGG + chr3_4:61614545-61614564 None:intergenic 35.0%
GTATGGACAGGAAAATATTG+TGG - chr3_4:61614639-61614658 Msa0511910:CDS 35.0%
TATTGTGGTTCTTGTTGACA+AGG - chr3_4:61614654-61614673 Msa0511910:CDS 35.0%
CAATCAAATGAGCAATCCAA+AGG + chr3_4:61614719-61614738 None:intergenic 35.0%
!! TTTTGGCTATGACTATGAGG+AGG + chr3_4:61611548-61611567 None:intergenic 40.0%
ATTAGTACCATTTCCAGCAC+AGG - chr3_4:61611580-61611599 Msa0511910:three_prime_UTR 40.0%
TTAGTACCATTTCCAGCACA+GGG - chr3_4:61611581-61611600 Msa0511910:three_prime_UTR 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG + chr3_4:61611616-61611635 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG + chr3_4:61611617-61611636 None:intergenic 40.0%
ACCATTACAACGTAGGAGTT+TGG + chr3_4:61611633-61611652 None:intergenic 40.0%
TGTGGAAACCATTACAACGT+AGG + chr3_4:61611640-61611659 None:intergenic 40.0%
CAGTGTTCACAAAGGTTATG+TGG + chr3_4:61611658-61611677 None:intergenic 40.0%
GAGACTTTACCAAACGTTTG+TGG + chr3_4:61611688-61611707 None:intergenic 40.0%
! TCTTGGAGCTGACTTTGTTA+AGG - chr3_4:61611706-61611725 Msa0511910:three_prime_UTR 40.0%
! CTTGGAGCTGACTTTGTTAA+GGG - chr3_4:61611707-61611726 Msa0511910:three_prime_UTR 40.0%
! CAATTTGAGACCATACCTGA+TGG - chr3_4:61611743-61611762 Msa0511910:three_prime_UTR 40.0%
TTCTGGTAAACCATCAGGTA+TGG + chr3_4:61611756-61611775 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG + chr3_4:61611761-61611780 None:intergenic 40.0%
GATGGCAATTATGACTTTGC+TGG - chr3_4:61611911-61611930 Msa0511910:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG - chr3_4:61611919-61611938 Msa0511910:CDS 40.0%
TGGAAGAGTGGCTAAAGATT+TGG - chr3_4:61611931-61611950 Msa0511910:CDS 40.0%
GGAAGAGTGGCTAAAGATTT+GGG - chr3_4:61611932-61611951 Msa0511910:CDS 40.0%
GCATTCGAGAGATACAACTA+TGG - chr3_4:61611954-61611973 Msa0511910:CDS 40.0%
TATGGACAGCTTCTACTTGT+GGG - chr3_4:61611972-61611991 Msa0511910:CDS 40.0%
TGTGGGATATTTGCAATTCG+AGG - chr3_4:61611997-61612016 Msa0511910:CDS 40.0%
ACTACTTACTAATAGGGGTG+TGG + chr3_4:61612489-61612508 None:intergenic 40.0%
ACACCCCTATTAGTAAGTAG+TGG - chr3_4:61612488-61612507 Msa0511910:CDS 40.0%
CACCCCTATTAGTAAGTAGT+GGG - chr3_4:61612489-61612508 Msa0511910:CDS 40.0%
TGGCCCACTACTTACTAATA+GGG + chr3_4:61612495-61612514 None:intergenic 40.0%
TTGGCCCACTACTTACTAAT+AGG + chr3_4:61612496-61612515 None:intergenic 40.0%
!! GTAAGTAGTGGGCCAATAAA+TGG - chr3_4:61612500-61612519 Msa0511910:CDS 40.0%
CCAGTGTCTATCCCATTTAT+TGG + chr3_4:61612515-61612534 None:intergenic 40.0%
CCAATAAATGGGATAGACAC+TGG - chr3_4:61612512-61612531 Msa0511910:CDS 40.0%
TTCATGGTCATTGAGTCACA+TGG - chr3_4:61612610-61612629 Msa0511910:CDS 40.0%
!! CAACAAAAATGTAGTGGGCA+CGG - chr3_4:61612716-61612735 Msa0511910:CDS 40.0%
TCAGAGAGAGAGAGAAAGAT+TGG - chr3_4:61612751-61612770 Msa0511910:intron 40.0%
TGAAAATGACATTAGCACCG+AGG - chr3_4:61612897-61612916 Msa0511910:intron 40.0%
ATGCGATATGTGCACTGTTT+AGG - chr3_4:61612936-61612955 Msa0511910:intron 40.0%
ACGAAACTGGATTATGTGGA+CGG + chr3_4:61613216-61613235 None:intergenic 40.0%
ACAGACGAAACTGGATTATG+TGG + chr3_4:61613220-61613239 None:intergenic 40.0%
TTAGGTCTAACAGACGAAAC+TGG + chr3_4:61613229-61613248 None:intergenic 40.0%
TCTACAATCGATCATGTGTG+TGG + chr3_4:61613423-61613442 None:intergenic 40.0%
!!! GTTAGGGTTTTTAGCCCTAA+GGG + chr3_4:61613742-61613761 None:intergenic 40.0%
!!! TGTTAGGGTTTTTAGCCCTA+AGG + chr3_4:61613743-61613762 None:intergenic 40.0%
GGGCCAATGCTATATATGTT+AGG + chr3_4:61613759-61613778 None:intergenic 40.0%
GCAAAACCGTATTCTTTCTC+AGG + chr3_4:61613807-61613826 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG - chr3_4:61613826-61613845 Msa0511910:intron 40.0%
CTAGATGAAGTCAAGGATAG+AGG - chr3_4:61614056-61614075 Msa0511910:intron 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG + chr3_4:61614209-61614228 None:intergenic 40.0%
GTCGGTATTTATGCAACACT+TGG - chr3_4:61614234-61614253 Msa0511910:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG - chr3_4:61614308-61614327 Msa0511910:CDS 40.0%
AGAGATGAGACAAAACTGCT+TGG - chr3_4:61614343-61614362 Msa0511910:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG - chr3_4:61614379-61614398 Msa0511910:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG - chr3_4:61614380-61614399 Msa0511910:CDS 40.0%
!! GGCTTTTGGCTATGACTATG+AGG + chr3_4:61611551-61611570 None:intergenic 45.0%
GCCAAACTCCTACGTTGTAA+TGG - chr3_4:61611629-61611648 Msa0511910:three_prime_UTR 45.0%
CTATGGACAGCTTCTACTTG+TGG - chr3_4:61611971-61611990 Msa0511910:CDS 45.0%
AGCTTCTACTTGTGGGTTTG+TGG - chr3_4:61611979-61611998 Msa0511910:CDS 45.0%
GCTTCTACTTGTGGGTTTGT+GGG - chr3_4:61611980-61611999 Msa0511910:CDS 45.0%
TTCGAGGAGCTTGTCAAAAG+AGG - chr3_4:61612013-61612032 Msa0511910:CDS 45.0%
GGCCCACTACTTACTAATAG+GGG + chr3_4:61612494-61612513 None:intergenic 45.0%
GCAAGTGACAACTGTGTCTA+GGG + chr3_4:61612689-61612708 None:intergenic 45.0%
! CGTGCCCACTACATTTTTGT+TGG + chr3_4:61612718-61612737 None:intergenic 45.0%
ATTTGCATACACTGTCAGCC+TGG - chr3_4:61613319-61613338 Msa0511910:intron 45.0%
! ACTTGTATCCAAGGTGCCAT+CGG + chr3_4:61613541-61613560 None:intergenic 45.0%
TGACTCTGATGAAGCTTGGA+AGG + chr3_4:61613605-61613624 None:intergenic 45.0%
TCAGTGACTCTGATGAAGCT+TGG + chr3_4:61613609-61613628 None:intergenic 45.0%
TGAATCCCTTGACACCCTTA+GGG - chr3_4:61613725-61613744 Msa0511910:intron 45.0%
!! TTTAGCCCTAAGGGTGTCAA+GGG + chr3_4:61613733-61613752 None:intergenic 45.0%
!!! TTTTAGCCCTAAGGGTGTCA+AGG + chr3_4:61613734-61613753 None:intergenic 45.0%
! GAATACGGTTTTGCAGCAAG+TGG - chr3_4:61613813-61613832 Msa0511910:intron 45.0%
GAGTAAATGGGAACCTTGCT+CGG - chr3_4:61613878-61613897 Msa0511910:intron 45.0%
TTGCTCATCCATCAGTTGGA+GGG - chr3_4:61614114-61614133 Msa0511910:intron 45.0%
GGTTCCTAACTCATTGTGGT+TGG - chr3_4:61614135-61614154 Msa0511910:intron 45.0%
CAGGTCTGCCTACTATTTGT+TGG - chr3_4:61614183-61614202 Msa0511910:intron 45.0%
TGAGACAAAACTGCTTGGAG+TGG - chr3_4:61614348-61614367 Msa0511910:CDS 45.0%
ACAGATGCTACTAATGTGGG+AGG - chr3_4:61614383-61614402 Msa0511910:CDS 45.0%
!!! TAAATAACTAAATTATTTTT+TGG + chr3_4:61612408-61612427 None:intergenic 5.0%
!!! AAAATATATATTACTATTTT+TGG - chr3_4:61613165-61613184 Msa0511910:intron 5.0%
CTATGACTATGAGGAGGTGG+AGG + chr3_4:61611542-61611561 None:intergenic 50.0%
TGGCTATGACTATGAGGAGG+TGG + chr3_4:61611545-61611564 None:intergenic 50.0%
ACATGACCCTGTGCTGGAAA+TGG + chr3_4:61611590-61611609 None:intergenic 50.0%
! CTGTGTCTAGGGTCCATGAT+TGG + chr3_4:61612678-61612697 None:intergenic 50.0%
GGCAAGTGACAACTGTGTCT+AGG + chr3_4:61612690-61612709 None:intergenic 50.0%
! GACACAGTTGTCACTTGCCA+AGG - chr3_4:61612691-61612710 Msa0511910:CDS 50.0%
! TTTTGTTGCCGATGGCACCT+TGG - chr3_4:61613530-61613549 Msa0511910:intron 50.0%
GTGAATCCCTTGACACCCTT+AGG - chr3_4:61613724-61613743 Msa0511910:intron 50.0%
ATTGGCCCACTTCACATGCT+TGG - chr3_4:61613771-61613790 Msa0511910:intron 50.0%
GCCTACCAAGCATGTGAAGT+GGG + chr3_4:61613779-61613798 None:intergenic 50.0%
TGCCTACCAAGCATGTGAAG+TGG + chr3_4:61613780-61613799 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG + chr3_4:61614109-61614128 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG - chr3_4:61614110-61614129 Msa0511910:intron 50.0%
CTTGCTCATCCATCAGTTGG+AGG - chr3_4:61614113-61614132 Msa0511910:intron 50.0%
GTTAGGAACCCTCCAACTGA+TGG + chr3_4:61614125-61614144 None:intergenic 50.0%
GGAGGGTTCCTAACTCATTG+TGG - chr3_4:61614131-61614150 Msa0511910:intron 50.0%
GCCCACTTCACATGCTTGGT+AGG - chr3_4:61613775-61613794 Msa0511910:intron 55.0%
GGGTTCACATGACCCTGTGC+TGG + chr3_4:61611596-61611615 None:intergenic 60.0%
GTCAAGGCACGCTAGTAGCG+TGG + chr3_4:61612779-61612798 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 61611503 61614782 61611503 ID=Msa0511910;Name=Msa0511910
chr3_4 mRNA 61611503 61614782 61611503 ID=Msa0511910-mRNA-1;Parent=Msa0511910;Name=Msa0511910-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|1|0.5|1|1|1|2|316|497
chr3_4 exon 61611503 61612762 61611503 ID=Msa0511910-mRNA-1:exon:15099;Parent=Msa0511910-mRNA-1
chr3_4 exon 61614233 61614782 61614233 ID=Msa0511910-mRNA-1:exon:15098;Parent=Msa0511910-mRNA-1
chr3_4 CDS 61614233 61614782 61614233 ID=Msa0511910-mRNA-1:cds;Parent=Msa0511910-mRNA-1
chr3_4 CDS 61611819 61612762 61611819 ID=Msa0511910-mRNA-1:cds;Parent=Msa0511910-mRNA-1
chr3_4 three_prime_UTR 61611503 61611818 61611503 ID=Msa0511910-mRNA-1:three_prime_utr;Parent=Msa0511910-mRNA-1
Gene Sequence

>Msa0511910

ATGTCTCATGAAAAGAAAAATAAAATAGAGTATACTCCTCCACCTCCTCATAGTCATAGCCAAAAGCCTCATGTTGTATTAGTACCATTTCCAGCACAGGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGTAATGGTTTCCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGGTAAAGTCTCTTGGAGCTGACTTTGTTAAGGGTCTACCTGATTTTCAATTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAAGATATTCCAATGTTGTGTGATTCAACTAGGAAAAATTGTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGCTAAAGATTTGGGCATTCGAGAGATACAACTATGGACAGCTTCTACTTGTGGGTTTGTGGGATATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTGTTGCCGATGGCACCTTGGATACAAGTTTAGATTGGATCTCTGGAATAAAAGATATCAGATTGAAAGACCTTCCAAGCTTCATCAGAGTCACTGATCTAAATGATATTATGTTTGATTTCTTTTGTGTTGAGCCACAAAATTGTGTGAGATCATCGGCAATCATCATTAACACATTTGAAGAATTAGAAGGTGAATCCCTTGACACCCTTAGGGCTAAAAACCCTAACATATATAGCATTGGCCCACTTCACATGCTTGGTAGGCATTTTCCTGAGAAAGAATACGGTTTTGCAGCAAGTGGTTCAAGTTTTTGGAAAAATGACTCAGAATGCATAAAATGGTTGAGTAAATGGGAACCTTGCTCGGTACTATATATTAATTATGGAAGTATAACTGTTATGACAGATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAGTTACCATTTTTATGGATAATGAGGCCAGATATAGTAATGGGTGAAGAAACTTCAACTTTGCCACAAGATTTTCTAGATGAAGTCAAGGATAGAGGATACATAACAAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGAGGGTTCCTAACTCATTGTGGTTGGAATTCTACACTTGAAGCAATTTCTTCAGGTCTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTCGGTATTTATGCAACACTTGGAAAATAGGAATGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACAGAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAACTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA
Protein sequence

>Msa0511910

MSHEKKNKIEYTPPPPHSHSQKPHVVLVPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLVKSLGADFVKGLPDFQFETIPDGLPESDKDATQDIPMLCDSTRKNCYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVGYLQFEELVKRGILPFKDENFVADGTLDTSLDWISGIKDIRLKDLPSFIRVTDLNDIMFDFFCVEPQNCVRSSAIIINTFEELEGESLDTLRAKNPNIYSIGPLHMLGRHFPEKEYGFAASGSSFWKNDSECIKWLSKWEPCSVLYINYGSITVMTDHHLKEFAWGIANSKLPFLWIMRPDIVMGEETSTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGGFLTHCGWNSTLEAISSGLPTICWPFFAEQQTNCRYLCNTWKIGMEINYDVKREEITELVMEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*