AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0730160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0730160 MtrunA17_Chr5g0423251 95.522 268 11 1 1 268 88 354 0.0 528
Msa0730160 MtrunA17_Chr5g0423191 84.962 266 39 1 1 266 88 352 3.73e-171 476
Msa0730160 MtrunA17_Chr5g0421041 83.209 268 44 1 1 268 86 352 9.35e-169 470
Msa0730160 MtrunA17_Chr5g0420721 82.353 255 44 1 12 266 1 254 1.97e-162 451
Msa0730160 MtrunA17_Chr5g0421011 70.677 266 77 1 1 266 88 352 5.29e-141 400
Msa0730160 MtrunA17_Chr5g0421101 68.302 265 83 1 1 265 88 351 9.75e-137 389
Msa0730160 MtrunA17_Chr5g0423201 66.914 269 87 2 1 268 88 355 1.09e-130 374
Msa0730160 MtrunA17_Chr5g0420951 65.399 263 90 1 1 263 95 356 1.13e-130 374
Msa0730160 MtrunA17_Chr5g0420901 62.642 265 98 1 1 265 87 350 2.48e-129 370
Msa0730160 MtrunA17_Chr5g0423221 65.909 264 88 2 1 263 112 374 3.41e-129 371
Msa0730160 MtrunA17_Chr5g0420941 64.906 265 92 1 1 265 86 349 4.09e-129 370
Msa0730160 MtrunA17_Chr8g0365241 64.151 265 94 1 1 265 99 362 2.72e-126 363
Msa0730160 MtrunA17_Chr5g0420981 64.151 265 94 1 1 265 95 358 2.36e-124 358
Msa0730160 MtrunA17_Chr5g0421091 60.526 266 103 2 1 265 86 350 1.24e-121 351
Msa0730160 MtrunA17_Chr5g0423211 60.526 266 100 3 1 263 88 351 5.10e-119 344
Msa0730160 MtrunA17_Chr8g0375671 60.448 268 105 1 1 268 97 363 1.31e-117 341
Msa0730160 MtrunA17_Chr8g0375681 58.955 268 109 1 1 268 25 291 5.46e-114 329
Msa0730160 MtrunA17_Chr8g0375601 58.271 266 110 1 1 266 92 356 7.74e-114 332
Msa0730160 MtrunA17_Chr2g0314381 56.015 266 116 1 1 266 120 384 9.64e-112 327
Msa0730160 MtrunA17_Chr2g0314391 55.639 266 117 1 1 266 113 377 2.33e-109 320
Msa0730160 MtrunA17_Chr8g0375571 56.604 265 114 1 1 265 90 353 2.37e-109 320
Msa0730160 MtrunA17_Chr2g0314401 56.107 262 114 1 1 262 94 354 2.40e-109 320
Msa0730160 MtrunA17_Chr1g0162191 51.301 269 129 2 1 268 90 357 2.71e-100 297
Msa0730160 MtrunA17_Chr8g0375701 48.855 262 132 2 1 262 96 355 2.28e-89 269
Msa0730160 MtrunA17_Chr2g0314371 48.707 232 94 3 1 210 95 323 1.64e-74 230
Msa0730160 MtrunA17_Chr5g0420881 64.865 148 51 1 118 265 1 147 9.15e-71 214
Msa0730160 MtrunA17_Chr7g0239821 38.258 264 162 1 1 264 105 367 8.61e-69 217
Msa0730160 MtrunA17_Chr7g0239121 36.742 264 167 0 1 264 92 355 9.21e-69 216
Msa0730160 MtrunA17_Chr7g0239101 37.262 263 164 1 1 263 96 357 2.08e-67 213
Msa0730160 MtrunA17_Chr2g0296371 39.394 264 158 2 1 263 95 357 7.74e-67 211
Msa0730160 MtrunA17_Chr7g0239111 37.647 255 158 1 10 264 105 358 1.10e-64 206
Msa0730160 MtrunA17_Chr3g0087031 38.168 262 160 2 1 262 101 360 1.68e-64 205
Msa0730160 MtrunA17_Chr7g0239071 36.471 255 161 1 10 264 50 303 1.31e-63 202
Msa0730160 MtrunA17_Chr8g0370711 40.000 255 149 3 9 262 103 354 2.90e-61 197
Msa0730160 MtrunA17_Chr7g0242551 36.466 266 165 2 1 263 99 363 1.67e-60 195
Msa0730160 MtrunA17_Chr5g0437181 36.502 263 164 2 1 261 94 355 2.46e-59 192
Msa0730160 MtrunA17_Chr3g0145171 38.039 255 154 3 9 262 103 354 2.46e-59 192
Msa0730160 MtrunA17_Chr8g0370721 37.262 263 161 3 1 262 95 354 6.01e-57 186
Msa0730160 MtrunA17_Chr4g0006371 35.521 259 163 2 9 264 115 372 8.36e-57 186
Msa0730160 MtrunA17_Chr3g0113641 34.586 266 171 2 1 264 95 359 2.85e-56 184
Msa0730160 MtrunA17_Chr4g0064781 33.585 265 168 4 1 262 89 348 1.82e-52 174
Msa0730160 MtrunA17_Chr7g0232161 41.489 188 109 1 10 197 110 296 2.10e-52 173
Msa0730160 MtrunA17_Chr3g0109041 34.962 266 163 5 7 264 91 354 2.01e-51 171
Msa0730160 MtrunA17_Chr3g0128001 34.783 253 162 3 10 261 86 336 4.39e-51 170
Msa0730160 MtrunA17_Chr5g0426891 38.760 258 147 6 9 262 92 342 8.11e-51 169
Msa0730160 MtrunA17_Chr7g0239091 32.955 264 166 3 1 264 201 453 5.54e-49 167
Msa0730160 MtrunA17_Chr5g0424201 37.815 238 142 4 9 242 91 326 4.83e-48 162
Msa0730160 MtrunA17_Chr3g0114861 36.735 245 149 4 9 249 86 328 1.30e-47 161
Msa0730160 MtrunA17_Chr3g0145181 37.143 245 147 5 1 242 94 334 8.86e-47 159
Msa0730160 MtrunA17_Chr3g0126741 35.714 266 157 7 1 261 104 360 2.06e-44 154
Msa0730160 MtrunA17_Chr3g0145201 37.143 245 147 5 1 242 729 969 3.30e-44 159
Msa0730160 MtrunA17_Chr5g0398291 34.599 237 147 5 4 234 95 329 3.55e-42 147
Msa0730160 MtrunA17_Chr5g0424211 35.808 229 139 4 9 231 89 315 1.24e-41 145
Msa0730160 MtrunA17_Chr8g0345831 34.343 198 128 2 65 262 148 343 2.06e-41 145
Msa0730160 MtrunA17_Chr1g0179801 32.184 261 163 6 11 262 118 373 3.51e-40 143
Msa0730160 MtrunA17_Chr1g0161041 33.962 265 164 7 1 261 137 394 7.90e-40 142
Msa0730160 MtrunA17_Chr7g0265221 29.213 267 169 6 11 262 119 380 1.91e-39 141
Msa0730160 MtrunA17_Chr4g0045411 31.452 248 153 7 2 238 80 321 1.09e-38 138
Msa0730160 MtrunA17_Chr1g0162361 32.812 256 151 7 4 243 69 319 3.74e-38 137
Msa0730160 MtrunA17_Chr7g0266651 29.520 271 174 7 1 263 102 363 7.27e-38 136
Msa0730160 MtrunA17_Chr8g0336861 32.222 270 167 9 1 262 105 366 1.54e-37 135
Msa0730160 MtrunA17_Chr1g0170631 35.859 198 121 4 73 267 3 197 2.25e-37 130
Msa0730160 MtrunA17_Chr1g0162351 30.515 272 163 9 9 263 127 389 4.56e-37 135
Msa0730160 MtrunA17_Chr8g0336781 31.716 268 170 7 1 262 140 400 6.06e-37 134
Msa0730160 MtrunA17_Chr8g0354261 35.266 207 124 5 68 268 178 380 7.86e-37 134
Msa0730160 MtrunA17_Chr4g0050031 32.210 267 169 6 1 262 107 366 8.49e-37 134
Msa0730160 MtrunA17_Chr1g0162321 30.515 272 163 9 9 263 127 389 8.88e-37 134
Msa0730160 MtrunA17_Chr8g0371931 31.538 260 171 6 11 267 93 348 1.53e-36 133
Msa0730160 MtrunA17_Chr5g0412651 37.778 180 109 3 72 250 156 333 3.92e-36 131
Msa0730160 MtrunA17_Chr3g0102041 30.798 263 170 6 11 264 93 352 4.35e-36 131
Msa0730160 MtrunA17_Chr2g0311761 31.034 261 171 4 1 257 112 367 5.00e-36 132
Msa0730160 MtrunA17_Chr4g0045441 38.372 172 102 3 66 235 150 319 1.76e-35 130
Msa0730160 MtrunA17_Chr4g0045471 32.377 244 139 9 11 235 84 320 1.89e-35 129
Msa0730160 MtrunA17_Chr3g0121141 30.769 221 146 4 37 254 77 293 1.89e-35 129
Msa0730160 MtrunA17_Chr1g0161081 44.595 148 78 4 116 261 226 371 2.00e-35 130
Msa0730160 MtrunA17_Chr5g0412681 37.853 177 107 3 67 242 138 312 4.36e-35 128
Msa0730160 MtrunA17_Chr8g0348081 31.852 270 166 10 1 262 105 364 4.51e-35 129
Msa0730160 MtrunA17_Chr3g0126761 45.205 146 77 3 116 261 89 231 6.89e-35 125
Msa0730160 MtrunA17_Chr1g0187821 34.848 198 124 3 68 262 175 370 7.02e-35 129
Msa0730160 MtrunA17_Chr8g0336761 30.970 268 171 7 1 262 105 364 7.37e-35 128
Msa0730160 MtrunA17_Chr2g0285931 30.682 264 165 9 1 251 64 322 7.39e-35 127
Msa0730160 MtrunA17_Chr8g0336851 30.712 267 173 7 1 262 105 364 7.60e-35 128
Msa0730160 MtrunA17_Chr3g0093761 30.337 267 173 7 1 262 95 353 8.06e-35 128
Msa0730160 MtrunA17_Chr8g0336631 30.224 268 174 7 1 262 105 365 8.07e-35 128
Msa0730160 MtrunA17_Chr1g0161111 44.595 148 78 4 116 261 285 430 9.45e-35 129
Msa0730160 MtrunA17_Chr7g0265351 32.714 269 165 8 1 262 78 337 9.59e-35 127
Msa0730160 MtrunA17_Chr2g0311921 29.588 267 177 6 1 262 98 358 1.01e-34 128
Msa0730160 MtrunA17_Chr8g0371921 31.048 248 158 6 11 252 93 333 1.46e-34 127
Msa0730160 MtrunA17_Chr3g0093741 31.716 268 169 7 1 262 95 354 1.54e-34 127
Msa0730160 MtrunA17_Chr2g0332191 30.290 241 158 5 9 242 96 333 4.36e-34 126
Msa0730160 MtrunA17_Chr2g0311831 30.075 266 176 5 1 262 112 371 9.71e-34 125
Msa0730160 MtrunA17_Chr3g0093751 30.597 268 172 8 1 262 95 354 1.02e-33 125
Msa0730160 MtrunA17_Chr5g0439011 29.911 224 148 4 37 254 78 298 1.22e-33 124
Msa0730160 MtrunA17_Chr4g0064771 35.326 184 111 4 74 254 27 205 1.27e-33 121
Msa0730160 MtrunA17_Chr8g0336751 31.364 220 142 5 46 262 184 397 1.53e-33 125
Msa0730160 MtrunA17_Chr2g0289341 30.180 222 148 4 37 254 77 295 1.56e-33 124
Msa0730160 MtrunA17_Chr5g0405411 30.924 249 159 6 9 251 91 332 2.15e-33 124
Msa0730160 MtrunA17_Chr4g0066121 30.370 270 173 8 1 264 105 365 2.18e-33 124
Msa0730160 MtrunA17_Chr4g0045431 37.791 172 103 3 66 235 150 319 2.50e-33 124
Msa0730160 MtrunA17_Chr7g0250511 28.405 257 174 6 10 262 101 351 3.72e-33 124
Msa0730160 MtrunA17_Chr4g0068891 38.889 198 110 7 72 261 125 319 4.10e-33 123
Msa0730160 MtrunA17_Chr5g0412671 33.641 217 141 3 35 250 119 333 7.01e-33 122
Msa0730160 MtrunA17_Chr6g0488511 32.632 190 121 2 44 228 82 269 8.66e-33 121
Msa0730160 MtrunA17_Chr3g0125201 32.035 231 144 4 1 226 45 267 9.11e-33 121
Msa0730160 MtrunA17_Chr1g0187831 30.189 265 164 8 7 261 120 373 1.01e-32 123
Msa0730160 MtrunA17_Chr2g0311861 32.536 209 130 4 63 262 141 347 1.48e-32 122
Msa0730160 MtrunA17_Chr8g0351101 31.203 266 162 7 8 254 106 369 1.56e-32 122
Msa0730160 MtrunA17_Chr4g0045451 36.047 172 106 3 66 235 150 319 1.79e-32 122
Msa0730160 MtrunA17_Chr8g0354241 33.498 203 125 5 67 263 177 375 4.61e-32 121
Msa0730160 MtrunA17_Chr6g0455481 30.645 248 158 7 9 249 89 329 4.61e-32 120
Msa0730160 MtrunA17_Chr7g0220011 28.279 244 168 4 9 249 86 325 4.93e-32 120
Msa0730160 MtrunA17_Chr2g0311631 31.449 283 157 9 1 263 97 362 5.98e-32 120
Msa0730160 MtrunA17_Chr1g0184111 34.500 200 121 5 63 260 142 333 1.33e-31 119
Msa0730160 MtrunA17_Chr1g0204181 29.707 239 157 4 8 238 111 346 1.69e-31 119
Msa0730160 MtrunA17_Chr4g0055591 28.358 268 168 8 7 262 106 361 6.40e-31 118
Msa0730160 MtrunA17_Chr8g0375581 57.471 87 36 1 94 180 1 86 7.44e-31 110
Msa0730160 MtrunA17_Chr1g0184121 33.000 200 124 5 63 260 142 333 9.42e-31 117
Msa0730160 MtrunA17_Chr1g0184101 34.759 187 115 4 63 247 143 324 2.29e-30 116
Msa0730160 MtrunA17_Chr6g0474391 27.857 280 170 6 1 255 109 381 2.31e-30 117
Msa0730160 MtrunA17_Chr2g0313111 30.651 261 165 10 10 262 73 325 2.44e-30 115
Msa0730160 MtrunA17_Chr1g0184161 34.921 189 116 4 63 249 143 326 3.57e-30 115
Msa0730160 MtrunA17_Chr1g0187811 32.143 224 137 6 46 262 278 493 4.38e-30 117
Msa0730160 MtrunA17_Chr2g0311701 30.603 232 143 6 41 263 154 376 5.07e-30 115
Msa0730160 MtrunA17_Chr7g0220001 31.330 233 151 5 9 237 88 315 5.22e-30 115
Msa0730160 MtrunA17_Chr2g0293931 37.500 200 107 9 75 261 9 203 1.27e-29 110
Msa0730160 MtrunA17_Chr7g0235981 27.407 270 184 4 1 264 66 329 2.61e-29 113
Msa0730160 MtrunA17_Chr2g0311691 30.638 235 145 6 37 262 144 369 3.87e-29 113
Msa0730160 MtrunA17_Chr7g0235951 27.308 260 167 5 9 262 130 373 4.00e-29 113
Msa0730160 MtrunA17_Chr6g0472861 29.368 269 167 9 1 257 111 368 6.39e-29 112
Msa0730160 MtrunA17_Chr8g0358941 29.368 269 169 10 10 263 72 334 6.50e-29 112
Msa0730160 MtrunA17_Chr2g0319491 32.948 173 108 3 70 242 141 305 7.56e-29 111
Msa0730160 MtrunA17_Chr4g0075471 41.071 112 65 1 115 226 26 136 1.03e-28 107
Msa0730160 MtrunA17_Chr3g0114871 34.409 186 116 4 11 192 91 274 1.23e-28 110
Msa0730160 MtrunA17_Chr7g0233661 39.231 130 71 3 113 242 16 137 1.74e-28 106
Msa0730160 MtrunA17_Chr2g0311681 29.915 234 146 6 38 262 145 369 2.69e-28 111
Msa0730160 MtrunA17_Chr1g0167931 29.811 265 175 5 6 262 57 318 3.87e-28 109
Msa0730160 MtrunA17_Chr1g0167961 29.213 267 177 6 1 262 113 372 3.90e-28 110
Msa0730160 MtrunA17_Chr1g0167951 28.947 266 178 5 1 262 97 355 4.14e-28 110
Msa0730160 MtrunA17_Chr1g0191201 29.437 231 146 5 8 227 105 329 8.94e-28 109
Msa0730160 MtrunA17_Chr2g0311741 31.884 207 137 4 57 262 124 327 1.03e-27 108
Msa0730160 MtrunA17_Chr1g0167911 29.615 260 170 7 1 255 98 349 1.04e-27 109
Msa0730160 MtrunA17_Chr1g0148771 29.839 248 164 7 1 245 99 339 1.33e-27 108
Msa0730160 MtrunA17_Chr8g0336801 35.374 147 90 3 119 262 12 156 1.44e-27 103
Msa0730160 MtrunA17_Chr8g0364471 28.125 224 149 4 40 257 151 368 1.44e-27 109
Msa0730160 MtrunA17_Chr5g0394071 38.462 130 72 3 113 242 42 163 1.63e-27 104
Msa0730160 MtrunA17_Chr4g0052251 27.953 254 166 10 10 251 74 322 3.77e-27 107
Msa0730160 MtrunA17_Chr8g0375661 61.644 73 28 0 1 73 97 169 8.02e-27 102
Msa0730160 MtrunA17_Chr2g0311711 28.821 229 148 6 40 262 151 370 8.48e-27 107
Msa0730160 MtrunA17_Chr4g0045461 30.204 245 157 5 11 243 84 326 9.61e-27 107
Msa0730160 MtrunA17_Chr3g0130391 28.634 227 153 3 8 227 118 342 1.10e-26 107
Msa0730160 MtrunA17_Chr8g0375641 55.814 86 35 1 1 83 97 182 1.77e-26 102
Msa0730160 MtrunA17_Chr5g0420891 60.274 73 29 0 1 73 87 159 3.57e-26 100
Msa0730160 MtrunA17_Chr3g0125421 29.508 244 149 8 12 241 92 326 9.38e-26 103
Msa0730160 MtrunA17_Chr7g0225881 27.876 226 149 7 46 264 154 372 9.44e-26 104
Msa0730160 MtrunA17_Chr4g0037611 37.500 136 76 4 108 242 26 153 1.37e-25 99.8
Msa0730160 MtrunA17_Chr1g0184241 25.940 266 184 6 1 262 111 367 3.89e-25 102
Msa0730160 MtrunA17_Chr1g0184151 30.159 189 125 4 63 249 143 326 3.26e-24 99.8
Msa0730160 MtrunA17_Chr7g0236011 27.481 262 164 8 9 262 130 373 3.79e-24 99.8
Msa0730160 MtrunA17_Chr2g0314361 55.696 79 35 0 184 262 1 79 5.27e-24 92.4
Msa0730160 MtrunA17_Chr1g0194321 29.762 252 156 8 31 264 86 334 5.40e-24 99.0
Msa0730160 MtrunA17_Chr4g0066991 29.310 232 152 5 37 262 128 353 7.11e-24 99.0
Msa0730160 MtrunA17_Chr8g0384461 27.419 248 162 8 9 244 97 338 1.74e-23 97.8
Msa0730160 MtrunA17_Chr8g0335411 26.336 262 167 6 9 262 130 373 1.87e-23 97.8
Msa0730160 MtrunA17_Chr7g0247991 28.750 240 149 6 9 242 130 353 2.31e-23 97.8
Msa0730160 MtrunA17_Chr4g0053251 31.489 235 142 7 1 221 60 289 2.92e-23 96.7
Msa0730160 MtrunA17_Chr1g0158011 31.771 192 123 6 76 262 73 261 1.25e-21 91.3
Msa0730160 MtrunA17_Chr8g0384481 30.055 183 125 3 77 258 183 363 2.89e-21 92.0
Msa0730160 MtrunA17_Chr8g0336871 30.114 176 112 3 85 257 2 169 3.82e-21 87.8
Msa0730160 MtrunA17_Chr4g0004071 29.388 245 165 7 8 250 62 300 2.71e-20 88.6
Msa0730160 MtrunA17_Chr4g0004061 28.340 247 170 6 8 252 62 303 3.50e-20 88.2
Msa0730160 MtrunA17_Chr5g0407781 25.468 267 181 8 1 262 44 297 8.13e-20 86.7
Msa0730160 MtrunA17_Chr8g0375621 61.404 57 22 0 94 150 1 57 1.09e-19 80.5
Msa0730160 MtrunA17_Chr7g0256741 28.455 246 167 7 2 244 57 296 1.17e-17 81.3
Msa0730160 MtrunA17_Chr1g0161101 42.727 110 50 4 116 223 404 502 6.26e-17 80.1
Msa0730160 MtrunA17_Chr2g0319521 32.143 112 74 2 72 183 15 124 2.26e-16 73.9
Msa0730160 MtrunA17_Chr3g0138351 24.514 257 182 10 2 252 57 307 2.70e-16 77.4
Msa0730160 MtrunA17_Chr3g0092531 27.545 167 117 4 61 226 107 270 4.85e-16 76.6
Msa0730160 MtrunA17_Chr3g0105281 27.778 144 100 2 76 219 149 288 6.75e-16 76.3
Msa0730160 MtrunA17_Chr4g0011311 32.000 125 79 4 61 183 168 288 1.11e-15 75.5
Msa0730160 MtrunA17_Chr8g0364171 33.333 111 72 2 73 183 18 126 4.44e-15 70.5
Msa0730160 MtrunA17_Chr3g0092581 28.472 144 99 4 83 225 1 141 1.58e-14 70.1
Msa0730160 MtrunA17_Chr7g0219991 37.864 103 62 2 79 181 254 354 2.42e-14 72.0
Msa0730160 MtrunA17_Chr4g0055911 26.667 255 151 10 11 242 58 299 5.76e-14 70.5
Msa0730160 MtrunA17_Chr8g0362741 32.000 125 82 3 59 183 152 273 8.71e-14 69.7
Msa0730160 MtrunA17_Chr4g0009541 24.400 250 172 9 2 242 54 295 1.70e-13 69.3
Msa0730160 MtrunA17_Chr2g0311611 39.726 73 35 3 118 183 1 71 2.43e-13 63.9
Msa0730160 MtrunA17_Chr5g0407731 24.354 271 185 9 1 262 72 331 3.63e-13 68.6
Msa0730160 MtrunA17_Chr1g0167921 34.409 93 59 2 90 182 66 156 9.03e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0730160 AT1G17020.1 56.439 264 112 2 1 262 96 358 2.40e-108 318
Msa0730160 AT4G25310.1 55.894 263 114 2 1 262 92 353 3.56e-107 315
Msa0730160 AT1G78550.2 53.053 262 122 1 1 262 18 278 5.01e-106 309
Msa0730160 AT1G78550.1 53.053 262 122 1 1 262 96 356 5.59e-105 309
Msa0730160 AT4G25300.1 53.232 263 121 2 1 262 95 356 1.96e-102 303
Msa0730160 AT1G17010.1 53.030 264 122 2 1 263 97 359 6.78e-100 296
Msa0730160 AT4G25310.2 48.855 262 106 2 1 262 92 325 1.92e-84 256
Msa0730160 AT4G25300.2 52.604 192 89 2 72 262 72 262 2.71e-70 217
Msa0730160 AT3G21420.1 41.634 257 147 3 8 262 107 362 2.22e-69 218
Msa0730160 AT2G38240.1 38.577 267 160 2 1 264 88 353 5.71e-69 217
Msa0730160 AT1G49390.2 35.938 256 160 3 8 262 17 269 2.09e-57 185
Msa0730160 AT5G20400.1 37.500 256 156 3 8 262 96 348 2.35e-57 187
Msa0730160 AT1G49390.1 35.938 256 160 3 8 262 96 348 1.62e-56 185
Msa0730160 AT5G20550.1 37.247 247 152 2 9 254 97 341 1.54e-55 182
Msa0730160 AT5G05600.1 34.231 260 168 2 1 258 107 365 1.90e-54 180
Msa0730160 AT3G55970.1 34.717 265 168 3 1 261 97 360 2.71e-54 179
Msa0730160 AT5G54000.1 35.659 258 158 4 8 262 17 269 5.34e-53 173
Msa0730160 AT5G54000.2 36.047 258 157 4 8 262 97 349 3.55e-52 174
Msa0730160 AT3G11180.1 33.846 260 169 2 1 258 136 394 7.75e-51 171
Msa0730160 AT3G11180.2 33.209 268 175 3 1 265 136 402 1.08e-49 169
Msa0730160 AT4G16330.1 33.462 260 163 5 5 260 3 256 1.88e-49 164
Msa0730160 AT4G16330.2 33.462 260 163 5 5 260 109 362 2.10e-48 164
Msa0730160 AT4G22880.1 35.833 240 146 5 1 234 92 329 1.20e-46 159
Msa0730160 AT4G22880.2 35.833 240 146 5 1 234 92 329 1.20e-46 159
Msa0730160 AT4G22880.3 35.833 240 146 5 1 234 92 329 1.20e-46 159
Msa0730160 AT5G24530.1 35.019 257 157 5 8 258 84 336 2.15e-43 150
Msa0730160 AT2G36690.2 32.950 261 162 7 9 263 111 364 3.54e-42 148
Msa0730160 AT2G36690.1 32.950 261 162 7 9 263 111 364 3.54e-42 148
Msa0730160 AT3G13610.1 32.246 276 158 9 1 262 101 361 1.06e-41 147
Msa0730160 AT4G10490.1 34.171 199 127 3 65 261 148 344 1.77e-41 145
Msa0730160 AT4G10500.1 32.828 198 130 3 65 261 150 345 1.31e-40 144
Msa0730160 AT5G59540.1 32.836 268 168 5 1 262 105 366 1.74e-39 141
Msa0730160 AT1G06650.2 33.459 266 158 11 1 257 109 364 6.05e-39 139
Msa0730160 AT1G55290.1 32.609 276 157 9 1 262 101 361 1.80e-38 138
Msa0730160 AT5G08640.2 31.513 238 157 5 9 242 90 325 1.51e-37 135
Msa0730160 AT5G08640.1 31.513 238 157 5 9 242 90 325 1.51e-37 135
Msa0730160 AT3G60290.1 29.658 263 179 5 1 261 95 353 1.79e-36 133
Msa0730160 AT5G59530.1 32.222 270 168 7 1 262 102 364 3.42e-36 132
Msa0730160 AT3G12900.1 31.985 272 164 9 1 263 98 357 6.77e-36 131
Msa0730160 AT3G51240.2 29.588 267 175 6 8 268 5 264 8.26e-36 129
Msa0730160 AT3G51240.1 29.588 267 175 6 8 268 89 348 6.07e-35 129
Msa0730160 AT1G06640.1 30.483 269 162 9 1 257 109 364 1.00e-34 128
Msa0730160 AT3G55970.2 35.294 187 116 3 1 183 97 282 1.04e-34 127
Msa0730160 AT5G05600.2 32.973 185 121 2 1 183 107 290 1.45e-34 126
Msa0730160 AT2G44800.1 29.183 257 176 5 7 261 101 353 2.79e-34 127
Msa0730160 AT1G15550.1 29.482 251 168 6 1 245 93 340 9.41e-34 125
Msa0730160 AT3G19000.1 31.295 278 173 7 4 268 79 351 1.02e-33 125
Msa0730160 AT1G62380.1 30.137 219 145 4 39 254 82 295 1.17e-33 124
Msa0730160 AT1G78440.1 30.037 273 164 11 10 268 63 322 1.18e-33 125
Msa0730160 AT5G07480.1 28.788 264 177 5 8 263 95 355 1.47e-33 125
Msa0730160 AT1G12010.1 28.794 257 170 5 1 254 49 295 1.91e-33 124
Msa0730160 AT5G07480.2 31.416 226 140 6 50 263 24 246 3.78e-33 121
Msa0730160 AT1G03410.2 32.046 259 160 8 1 251 101 351 6.00e-33 124
Msa0730160 AT3G19010.1 31.317 281 173 8 2 268 72 346 6.09e-33 123
Msa0730160 AT3G19010.4 31.317 281 173 8 2 268 72 346 6.09e-33 123
Msa0730160 AT1G06620.1 31.502 273 163 8 1 262 106 365 9.63e-33 123
Msa0730160 AT1G03410.1 32.046 259 160 8 1 251 138 388 9.79e-33 124
Msa0730160 AT5G63590.1 31.967 244 158 6 4 242 57 297 1.18e-32 122
Msa0730160 AT1G06645.1 30.855 269 158 10 1 257 122 374 8.39e-32 121
Msa0730160 AT5G63600.1 32.031 256 161 7 6 259 78 322 8.52e-32 120
Msa0730160 AT1G04380.1 34.091 220 136 5 46 262 132 345 1.22e-31 120
Msa0730160 AT1G05010.1 29.114 237 157 5 26 254 66 299 3.02e-31 118
Msa0730160 AT3G61400.1 30.741 270 166 12 1 259 109 368 3.79e-31 119
Msa0730160 AT2G19590.2 29.767 215 137 4 19 228 54 259 4.32e-31 117
Msa0730160 AT2G30830.1 30.075 266 176 6 1 262 99 358 4.52e-31 118
Msa0730160 AT2G19590.1 29.767 215 137 4 19 228 69 274 5.04e-31 117
Msa0730160 AT5G43440.1 29.740 269 174 8 1 262 105 365 6.05e-31 118
Msa0730160 AT5G63600.2 31.907 257 161 8 6 259 78 323 6.76e-31 117
Msa0730160 AT1G03400.1 30.888 259 166 8 1 253 92 343 6.96e-31 118
Msa0730160 AT1G04350.1 30.741 270 171 9 1 262 99 360 1.15e-30 117
Msa0730160 AT2G30840.1 30.303 264 168 9 1 257 103 357 1.50e-30 117
Msa0730160 AT5G43450.1 31.452 248 151 9 14 257 125 357 3.69e-30 116
Msa0730160 AT1G30040.1 30.000 230 149 8 31 251 95 321 6.34e-30 115
Msa0730160 AT1G77330.1 28.507 221 141 4 42 254 86 297 1.99e-29 113
Msa0730160 AT4G25420.1 29.464 224 148 4 8 224 112 332 6.16e-29 113
Msa0730160 AT1G44090.1 29.787 235 143 7 11 232 118 343 8.98e-29 113
Msa0730160 AT1G80340.1 28.685 251 164 6 1 242 86 330 1.05e-28 112
Msa0730160 AT1G47990.1 29.779 272 161 11 11 265 63 321 1.09e-28 111
Msa0730160 AT2G34555.1 36.022 186 109 6 64 242 125 307 2.82e-28 110
Msa0730160 AT3G19010.3 28.986 276 156 8 2 268 72 316 4.56e-28 110
Msa0730160 AT5G43935.1 30.579 242 135 8 9 242 66 282 5.80e-28 108
Msa0730160 AT5G07200.1 29.487 234 155 4 1 226 103 334 1.25e-27 109
Msa0730160 AT4G21200.1 44.167 120 60 3 113 232 192 304 3.68e-27 107
Msa0730160 AT4G21690.1 28.125 256 164 6 1 242 83 332 4.01e-27 107
Msa0730160 AT1G60980.1 33.333 177 109 4 72 242 183 356 5.51e-27 108
Msa0730160 AT1G80330.1 27.519 258 172 9 1 247 85 338 6.73e-27 107
Msa0730160 AT2G30840.3 29.545 264 164 10 1 257 103 351 6.89e-27 107
Msa0730160 AT5G51810.1 28.000 225 145 4 8 221 110 328 7.06e-26 105
Msa0730160 AT5G12270.1 28.782 271 178 8 1 262 95 359 1.51e-25 103
Msa0730160 AT1G02400.1 37.580 157 89 6 103 252 165 319 1.70e-25 103
Msa0730160 AT1G03400.2 27.875 287 166 9 1 253 92 371 2.09e-25 103
Msa0730160 AT1G06650.1 33.333 192 115 8 1 188 109 291 9.25e-25 100
Msa0730160 AT3G50210.4 31.602 231 137 7 9 221 68 295 2.92e-24 100
Msa0730160 AT3G50210.1 31.602 231 137 7 9 221 68 295 2.92e-24 100
Msa0730160 AT3G50210.3 31.602 231 137 7 9 221 68 295 2.92e-24 100
Msa0730160 AT3G50210.2 35.329 167 101 4 61 221 48 213 3.46e-24 98.2
Msa0730160 AT2G25450.1 28.467 274 171 11 1 262 99 359 6.13e-24 99.4
Msa0730160 AT3G19000.2 30.570 193 119 6 4 183 79 269 7.29e-23 95.1
Msa0730160 AT3G49620.1 30.901 233 147 8 1 221 86 316 8.61e-23 96.3
Msa0730160 AT1G50960.1 35.862 145 91 2 73 217 153 295 1.96e-22 95.1
Msa0730160 AT1G06640.2 31.579 190 109 7 1 182 109 285 3.29e-21 91.3
Msa0730160 AT3G49630.2 35.802 162 94 6 65 221 62 218 3.51e-21 90.1
Msa0730160 AT1G06640.3 30.890 191 111 7 1 183 109 286 7.87e-21 89.7
Msa0730160 AT3G49630.3 29.237 236 147 8 1 221 57 287 9.99e-21 90.1
Msa0730160 AT3G49630.1 29.237 236 147 8 1 221 61 291 1.02e-20 90.1
Msa0730160 AT3G47190.1 28.194 227 144 7 1 213 67 288 4.11e-20 88.6
Msa0730160 AT5G63595.1 27.315 216 133 5 10 223 73 266 5.22e-20 87.4
Msa0730160 AT3G46500.5 29.084 251 155 10 9 242 64 308 5.23e-20 88.2
Msa0730160 AT5G59540.2 31.720 186 118 4 1 183 105 284 7.80e-20 87.0
Msa0730160 AT1G06620.2 33.158 190 106 7 1 182 106 282 1.06e-18 84.0
Msa0730160 AT4G25420.2 26.667 180 123 3 11 183 115 292 1.08e-18 84.0
Msa0730160 AT3G61400.2 32.105 190 112 10 1 183 109 288 1.43e-18 83.6
Msa0730160 AT3G19010.2 29.000 200 123 8 2 186 72 267 3.69e-18 82.8
Msa0730160 AT2G30840.2 29.730 185 119 6 1 182 103 279 5.43e-18 82.4
Msa0730160 AT1G52820.1 27.381 252 167 8 7 252 64 305 5.56e-18 82.4
Msa0730160 AT3G46490.1 28.148 270 164 12 9 252 64 329 1.47e-17 81.3
Msa0730160 AT3G46500.7 29.730 222 133 10 9 213 64 279 2.24e-17 80.5
Msa0730160 AT5G51810.2 25.789 190 124 4 8 186 110 293 1.48e-16 78.2
Msa0730160 AT3G46500.10 29.412 187 117 6 66 242 53 234 1.97e-16 77.0
Msa0730160 AT3G46500.1 29.412 187 117 6 66 242 53 234 1.97e-16 77.0
Msa0730160 AT1G04380.2 34.783 138 84 4 46 183 132 263 5.70e-16 76.3
Msa0730160 AT5G43440.2 29.032 186 120 7 1 182 105 282 7.42e-16 76.3
Msa0730160 AT3G46500.4 30.508 177 108 6 76 242 1 172 1.23e-15 73.6
Msa0730160 AT5G43450.2 31.765 170 100 8 14 182 125 279 1.23e-15 75.5
Msa0730160 AT1G30040.2 30.247 162 101 8 31 183 95 253 2.14e-15 74.3
Msa0730160 AT4G22870.1 35.345 116 69 3 151 265 2 112 3.99e-15 70.1
Msa0730160 AT1G28030.1 36.975 119 73 2 128 244 184 302 6.54e-15 73.9
Msa0730160 AT4G23340.2 32.061 131 83 4 118 244 47 175 8.40e-15 71.6
Msa0730160 AT2G06960.1 30.247 162 96 7 90 250 1 146 1.62e-14 69.7
Msa0730160 AT3G46490.2 28.216 241 139 12 9 219 64 300 2.03e-14 72.4
Msa0730160 AT3G46500.3 30.380 158 95 6 66 213 53 205 3.85e-14 70.1
Msa0730160 AT4G03070.1 37.931 116 69 3 128 242 187 300 6.95e-14 70.9
Msa0730160 AT4G23340.1 32.061 131 83 4 118 244 165 293 7.76e-14 70.9
Msa0730160 AT5G63580.1 29.050 179 116 7 6 179 64 236 1.39e-13 68.9
Msa0730160 AT5G63580.2 29.050 179 116 7 6 179 64 236 1.50e-13 68.9
Msa0730160 AT4G16765.3 31.928 166 99 7 60 214 45 207 3.79e-13 67.8
Msa0730160 AT1G14130.1 27.564 156 110 2 107 260 147 301 1.44e-12 67.0
Msa0730160 AT4G22870.2 33.613 119 70 4 151 265 40 153 1.88e-12 63.9
Msa0730160 AT3G46500.2 30.370 135 80 5 66 190 53 183 6.00e-11 60.5

Find 74 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAACAATGCAGGCCTTTC+AGG 0.135037 5_1:+38450553 None:intergenic
CTGAATGGTTGAGGAATATT+TGG 0.148068 5_1:+38451684 None:intergenic
CTGAAAATAGTTAGCATATT+TGG 0.157880 5_1:-38450381 Msa0730160:three_prime_UTR
CATAAATGTTGGAGACATTT+TGG 0.162522 5_1:-38451022 Msa0730160:CDS
TGGAAGAGAAGAAGAAATTT+TGG 0.211908 5_1:-38451833 Msa0730160:CDS
CAAACCCCTCAAAATCTTCT+TGG 0.215079 5_1:+38451805 None:intergenic
ATTTATATTCTCAGACTAAA+TGG 0.226952 5_1:-38450306 None:intergenic
CAAATATTCCTCAACCATTC+AGG 0.259007 5_1:-38451683 Msa0730160:intron
TTTAAATGTTTAAAGTATAA+AGG 0.274516 5_1:+38452223 None:intergenic
AGGAATATTTGGAAATAAAC+GGG 0.294366 5_1:+38451695 None:intergenic
GAGGAATATTTGGAAATAAA+CGG 0.370120 5_1:+38451694 None:intergenic
TTGGAGACCTTCAATGTCAT+TGG 0.371526 5_1:+38451101 None:intergenic
ATTAAGTCTAGCAGTTCATT+TGG 0.374517 5_1:+38451240 None:intergenic
ATAAAATGTTTAAAGTATAA+AGG 0.378266 5_1:+38452198 None:intergenic
CGGAGTCAATCCTTTATTGA+TGG 0.402675 5_1:-38451898 Msa0730160:exon
GGAAGTGATAAAAGTATCAT+AGG 0.403496 5_1:-38450435 Msa0730160:exon
CTGAGAATCAAAAGTTAGAA+TGG 0.421549 5_1:-38451764 Msa0730160:CDS
AATGACCGGGACTTGTTGTA+AGG 0.431293 5_1:+38452092 None:intergenic
CCTACAATGGTTCTCATTTG+AGG 0.434185 5_1:+38450598 None:intergenic
GACCTTCAATGTCATTGGCT+TGG 0.446002 5_1:+38451106 None:intergenic
TTGATGGAAAATGTGAAGAT+AGG 0.446800 5_1:-38451882 Msa0730160:CDS
CTCCAAGCCAATGACATTGA+AGG 0.447858 5_1:-38451108 Msa0730160:CDS
TCTCTTCCAATGGAAGACTT+AGG 0.450309 5_1:+38451847 None:intergenic
AGACCATGCATGTAAAGAAT+GGG 0.451504 5_1:-38452022 Msa0730160:five_prime_UTR
CCTCAAATGAGAACCATTGT+AGG 0.460683 5_1:-38450598 Msa0730160:CDS
TGAACAATGCAGGCCTTTCA+GGG 0.462268 5_1:+38450554 None:intergenic
CCCCAACCAGAAAATGTCAT+TGG 0.464977 5_1:-38451171 Msa0730160:CDS
GGTCTCCAAATCAGAAAAGA+TGG 0.465607 5_1:-38451087 Msa0730160:CDS
CTTCAGATAACAATTTACTT+AGG 0.468457 5_1:+38452067 None:intergenic
CTCAATCCTCATTCTGATGC+GGG 0.474310 5_1:-38451147 Msa0730160:CDS
AATTTCTTCTTCTCTTCCAA+TGG 0.476254 5_1:+38451837 None:intergenic
CGGGGATTCCTTGCATAGGA+TGG 0.480457 5_1:+38451714 None:intergenic
TAGACCATGCATGTAAAGAA+TGG 0.481543 5_1:-38452023 Msa0730160:five_prime_UTR
AGAGTTCCTAAGTCTTCCAT+TGG 0.484540 5_1:-38451853 Msa0730160:CDS
TAATGATGAATTATAAAGAT+GGG 0.488745 5_1:-38450336 Msa0730160:three_prime_UTR
CTTTCAGGGGTAACAAGTCT+TGG 0.491424 5_1:+38450568 None:intergenic
TGAGAATCAAAAGTTAGAAT+GGG 0.494198 5_1:-38451763 Msa0730160:CDS
GACATGATTTCCCCTGTAGC+TGG 0.497390 5_1:+38450488 None:intergenic
ATAATGATGAATTATAAAGA+TGG 0.505774 5_1:-38450337 Msa0730160:three_prime_UTR
CAATGTCATTGGCTTGGAGA+AGG 0.510393 5_1:+38451112 None:intergenic
GTTAGCATATTTGGTAGCTA+AGG 0.512866 5_1:-38450372 Msa0730160:three_prime_UTR
TACGAGTAATAATGCATCGC+TGG 0.519042 5_1:-38452255 Msa0730160:five_prime_UTR
AAAAGTATCATAGGACTATG+TGG 0.525959 5_1:-38450426 Msa0730160:three_prime_UTR
GGGGTAACAAGTCTTGGTGT+TGG 0.530064 5_1:+38450574 None:intergenic
GATGCTTCGATAAATTCCAT+TGG 0.536434 5_1:+38450681 None:intergenic
ATATAAAACCTGAATGGTTG+AGG 0.540451 5_1:+38451675 None:intergenic
AATTTACTTAGGTCAATGAC+CGG 0.542644 5_1:+38452078 None:intergenic
AACTCCCTTACAACAAGTCC+CGG 0.544566 5_1:-38452097 Msa0730160:five_prime_UTR
AACAAGATATAAAACCTGAA+TGG 0.546593 5_1:+38451669 None:intergenic
AAATCAGAAAAGATGGACAT+TGG 0.547128 5_1:-38451080 Msa0730160:CDS
TGGTTCTCATTTGAGGTCTG+TGG 0.550170 5_1:+38450605 None:intergenic
TCTTGGTGTTGGACCTACAA+TGG 0.560044 5_1:+38450585 None:intergenic
ACTCAATCCTCATTCTGATG+CGG 0.564038 5_1:-38451148 Msa0730160:CDS
GGCTTGGAGAAGGATGGTTA+AGG 0.567568 5_1:+38451122 None:intergenic
GTCATTGGCTTGGAGAAGGA+TGG 0.570781 5_1:+38451116 None:intergenic
ATATTATCAAGCTAAGAAAG+AGG 0.573842 5_1:-38452164 Msa0730160:five_prime_UTR
TGATTACAGTTGATTAATCA+CGG 0.584047 5_1:-38451918 Msa0730160:intron
AGGTCTGTGGAAAGCTACAA+TGG 0.585010 5_1:+38450618 None:intergenic
CAAGACTTGTTACCCCTGAA+AGG 0.587133 5_1:-38450567 Msa0730160:CDS
AAAGTATCATAGGACTATGT+GGG 0.591071 5_1:-38450425 Msa0730160:three_prime_UTR
AAGGCACCCGCATCAGAATG+AGG 0.599815 5_1:+38451141 None:intergenic
ATTTATGACAAAAGCAGCAT+CGG 0.604432 5_1:+38451038 None:intergenic
GACCATGCATGTAAAGAATG+GGG 0.611707 5_1:-38452021 Msa0730160:five_prime_UTR
TAAACGGGGATTCCTTGCAT+AGG 0.614239 5_1:+38451710 None:intergenic
CAATTAACTCAAAGAAAGAG+AGG 0.617824 5_1:-38450645 Msa0730160:CDS
ACAAAAGCAGCATCGGTGAG+TGG 0.619056 5_1:+38451045 None:intergenic
ACCATGCATGTAAAGAATGG+GGG 0.621988 5_1:-38452020 Msa0730160:five_prime_UTR
CGACTCTTCCATCCTATGCA+AGG 0.622119 5_1:-38451722 Msa0730160:CDS
GGAATATTTGGAAATAAACG+GGG 0.629086 5_1:+38451696 None:intergenic
GAACAATGCAGGCCTTTCAG+GGG 0.639437 5_1:+38450555 None:intergenic
ATGACCGGGACTTGTTGTAA+GGG 0.642501 5_1:+38452093 None:intergenic
ATGATATAACTCAATCAATG+AGG 0.649828 5_1:-38451215 Msa0730160:CDS
GTTGTGCAGATACTGACCAA+TGG 0.680891 5_1:-38450697 Msa0730160:intron
ATTTACTTAGGTCAATGACC+GGG 0.683898 5_1:+38452079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAAATTATAATAA+AGG + chr5_1:38450609-38450628 None:intergenic 0.0%
!! ATAAAATTAAATTATAATAA+AGG + chr5_1:38450609-38450628 None:intergenic 0.0%
!!! TTTAAATGTTTAAAGTATAA+AGG + chr5_1:38450356-38450375 None:intergenic 10.0%
!!! ATAAAATGTTTAAAGTATAA+AGG + chr5_1:38450381-38450400 None:intergenic 10.0%
!!! TTATACTTTAAACATTTTAT+AGG - chr5_1:38450381-38450400 Msa0730160:three_prime_UTR 10.0%
!! AAATTAAATTATAATAAAGG+AGG + chr5_1:38450606-38450625 None:intergenic 10.0%
!!! TTTAAATGTTTAAAGTATAA+AGG + chr5_1:38450356-38450375 None:intergenic 10.0%
!!! ATAAAATGTTTAAAGTATAA+AGG + chr5_1:38450381-38450400 None:intergenic 10.0%
!!! TTATACTTTAAACATTTTAT+AGG - chr5_1:38450381-38450400 Msa0730160:three_prime_UTR 10.0%
!! AAATTAAATTATAATAAAGG+AGG + chr5_1:38450606-38450625 None:intergenic 10.0%
!!! ATTTTTCAATTCTAAACAAT+AGG + chr5_1:38451268-38451287 None:intergenic 15.0%
!!! CATTTTATAGATTCAAATTT+AGG + chr5_1:38451744-38451763 None:intergenic 15.0%
!! ATAATGATGAATTATAAAGA+TGG - chr5_1:38452239-38452258 Msa0730160:five_prime_UTR 15.0%
!! TAATGATGAATTATAAAGAT+GGG - chr5_1:38452240-38452259 Msa0730160:five_prime_UTR 15.0%
!!! ATTTTTCAATTCTAAACAAT+AGG + chr5_1:38451268-38451287 None:intergenic 15.0%
!!! CATTTTATAGATTCAAATTT+AGG + chr5_1:38451744-38451763 None:intergenic 15.0%
!! ATAATGATGAATTATAAAGA+TGG - chr5_1:38452239-38452258 Msa0730160:five_prime_UTR 15.0%
!! TAATGATGAATTATAAAGAT+GGG - chr5_1:38452240-38452259 Msa0730160:five_prime_UTR 15.0%
!! ATAAAGGGTAAAATAAAAAG+AGG + chr5_1:38451608-38451627 None:intergenic 20.0%
!!! AAATTTTCATGCATAACATT+TGG + chr5_1:38451660-38451679 None:intergenic 20.0%
!! TGAGAATTCAAAAAGATAAT+AGG - chr5_1:38452120-38452139 Msa0730160:five_prime_UTR 20.0%
!! ATAAAGGGTAAAATAAAAAG+AGG + chr5_1:38451608-38451627 None:intergenic 20.0%
!!! AAATTTTCATGCATAACATT+TGG + chr5_1:38451660-38451679 None:intergenic 20.0%
!! TGAGAATTCAAAAAGATAAT+AGG - chr5_1:38452120-38452139 Msa0730160:five_prime_UTR 20.0%
! ATATTATCAAGCTAAGAAAG+AGG - chr5_1:38450412-38450431 Msa0730160:three_prime_UTR 25.0%
! CTTCAGATAACAATTTACTT+AGG + chr5_1:38450512-38450531 None:intergenic 25.0%
! TGATTACAGTTGATTAATCA+CGG - chr5_1:38450658-38450677 Msa0730160:CDS 25.0%
!! TTCACATTTTCCATCAATAA+AGG + chr5_1:38450691-38450710 None:intergenic 25.0%
! TGAGAATCAAAAGTTAGAAT+GGG - chr5_1:38450813-38450832 Msa0730160:intron 25.0%
! AGGAATATTTGGAAATAAAC+GGG + chr5_1:38450884-38450903 None:intergenic 25.0%
! GAGGAATATTTGGAAATAAA+CGG + chr5_1:38450885-38450904 None:intergenic 25.0%
! AACAAGATATAAAACCTGAA+TGG + chr5_1:38450910-38450929 None:intergenic 25.0%
! AAATGCAATAGTACAACTAT+AGG - chr5_1:38451106-38451125 Msa0730160:CDS 25.0%
! ATGATATAACTCAATCAATG+AGG - chr5_1:38451361-38451380 Msa0730160:intron 25.0%
! CCATGATACTATTGTAATTT+CGG + chr5_1:38451824-38451843 None:intergenic 25.0%
! CTTACCAATTTAATCAGTAA+TGG - chr5_1:38451857-38451876 Msa0730160:CDS 25.0%
!! ACAACCATTACTGATTAAAT+TGG + chr5_1:38451864-38451883 None:intergenic 25.0%
! CTGAAAATAGTTAGCATATT+TGG - chr5_1:38452195-38452214 Msa0730160:five_prime_UTR 25.0%
! ATATTATCAAGCTAAGAAAG+AGG - chr5_1:38450412-38450431 Msa0730160:three_prime_UTR 25.0%
! CTTCAGATAACAATTTACTT+AGG + chr5_1:38450512-38450531 None:intergenic 25.0%
! TGATTACAGTTGATTAATCA+CGG - chr5_1:38450658-38450677 Msa0730160:CDS 25.0%
!! TTCACATTTTCCATCAATAA+AGG + chr5_1:38450691-38450710 None:intergenic 25.0%
! TGAGAATCAAAAGTTAGAAT+GGG - chr5_1:38450813-38450832 Msa0730160:intron 25.0%
! AGGAATATTTGGAAATAAAC+GGG + chr5_1:38450884-38450903 None:intergenic 25.0%
! GAGGAATATTTGGAAATAAA+CGG + chr5_1:38450885-38450904 None:intergenic 25.0%
! AACAAGATATAAAACCTGAA+TGG + chr5_1:38450910-38450929 None:intergenic 25.0%
! AAATGCAATAGTACAACTAT+AGG - chr5_1:38451106-38451125 Msa0730160:CDS 25.0%
! ATGATATAACTCAATCAATG+AGG - chr5_1:38451361-38451380 Msa0730160:intron 25.0%
! CCATGATACTATTGTAATTT+CGG + chr5_1:38451824-38451843 None:intergenic 25.0%
! CTTACCAATTTAATCAGTAA+TGG - chr5_1:38451857-38451876 Msa0730160:CDS 25.0%
!! ACAACCATTACTGATTAAAT+TGG + chr5_1:38451864-38451883 None:intergenic 25.0%
! CTGAAAATAGTTAGCATATT+TGG - chr5_1:38452195-38452214 Msa0730160:five_prime_UTR 25.0%
AATTTACTTAGGTCAATGAC+CGG + chr5_1:38450501-38450520 None:intergenic 30.0%
TTGATGGAAAATGTGAAGAT+AGG - chr5_1:38450694-38450713 Msa0730160:intron 30.0%
AATTTCTTCTTCTCTTCCAA+TGG + chr5_1:38450742-38450761 None:intergenic 30.0%
! TGGAAGAGAAGAAGAAATTT+TGG - chr5_1:38450743-38450762 Msa0730160:intron 30.0%
! CAAAACCAAGAAGATTTTGA+GGG - chr5_1:38450766-38450785 Msa0730160:intron 30.0%
! AAAACCAAGAAGATTTTGAG+GGG - chr5_1:38450767-38450786 Msa0730160:intron 30.0%
CTGAGAATCAAAAGTTAGAA+TGG - chr5_1:38450812-38450831 Msa0730160:intron 30.0%
GGAATATTTGGAAATAAACG+GGG + chr5_1:38450883-38450902 None:intergenic 30.0%
ATATAAAACCTGAATGGTTG+AGG + chr5_1:38450904-38450923 None:intergenic 30.0%
ATTAAGTCTAGCAGTTCATT+TGG + chr5_1:38451339-38451358 None:intergenic 30.0%
! AATGTCCATCTTTTCTGATT+TGG + chr5_1:38451497-38451516 None:intergenic 30.0%
AAATCAGAAAAGATGGACAT+TGG - chr5_1:38451496-38451515 Msa0730160:intron 30.0%
ATTTATGACAAAAGCAGCAT+CGG + chr5_1:38451541-38451560 None:intergenic 30.0%
! CATAAATGTTGGAGACATTT+TGG - chr5_1:38451554-38451573 Msa0730160:intron 30.0%
CACTCATAAGAACACATAAA+GGG + chr5_1:38451623-38451642 None:intergenic 30.0%
ACACTCATAAGAACACATAA+AGG + chr5_1:38451624-38451643 None:intergenic 30.0%
! TTTCAAGTACAAAGAGTTTG+AGG + chr5_1:38451797-38451816 None:intergenic 30.0%
CCGAAATTACAATAGTATCA+TGG - chr5_1:38451821-38451840 Msa0730160:CDS 30.0%
CAATTAACTCAAAGAAAGAG+AGG - chr5_1:38451931-38451950 Msa0730160:intron 30.0%
!! GGAAGTGATAAAAGTATCAT+AGG - chr5_1:38452141-38452160 Msa0730160:five_prime_UTR 30.0%
!! AAAAGTATCATAGGACTATG+TGG - chr5_1:38452150-38452169 Msa0730160:five_prime_UTR 30.0%
! AAAGTATCATAGGACTATGT+GGG - chr5_1:38452151-38452170 Msa0730160:five_prime_UTR 30.0%
AATTTACTTAGGTCAATGAC+CGG + chr5_1:38450501-38450520 None:intergenic 30.0%
TTGATGGAAAATGTGAAGAT+AGG - chr5_1:38450694-38450713 Msa0730160:intron 30.0%
AATTTCTTCTTCTCTTCCAA+TGG + chr5_1:38450742-38450761 None:intergenic 30.0%
! TGGAAGAGAAGAAGAAATTT+TGG - chr5_1:38450743-38450762 Msa0730160:intron 30.0%
! CAAAACCAAGAAGATTTTGA+GGG - chr5_1:38450766-38450785 Msa0730160:intron 30.0%
! AAAACCAAGAAGATTTTGAG+GGG - chr5_1:38450767-38450786 Msa0730160:intron 30.0%
CTGAGAATCAAAAGTTAGAA+TGG - chr5_1:38450812-38450831 Msa0730160:intron 30.0%
GGAATATTTGGAAATAAACG+GGG + chr5_1:38450883-38450902 None:intergenic 30.0%
ATATAAAACCTGAATGGTTG+AGG + chr5_1:38450904-38450923 None:intergenic 30.0%
ATTAAGTCTAGCAGTTCATT+TGG + chr5_1:38451339-38451358 None:intergenic 30.0%
! AATGTCCATCTTTTCTGATT+TGG + chr5_1:38451497-38451516 None:intergenic 30.0%
AAATCAGAAAAGATGGACAT+TGG - chr5_1:38451496-38451515 Msa0730160:intron 30.0%
ATTTATGACAAAAGCAGCAT+CGG + chr5_1:38451541-38451560 None:intergenic 30.0%
! CATAAATGTTGGAGACATTT+TGG - chr5_1:38451554-38451573 Msa0730160:intron 30.0%
CACTCATAAGAACACATAAA+GGG + chr5_1:38451623-38451642 None:intergenic 30.0%
ACACTCATAAGAACACATAA+AGG + chr5_1:38451624-38451643 None:intergenic 30.0%
! TTTCAAGTACAAAGAGTTTG+AGG + chr5_1:38451797-38451816 None:intergenic 30.0%
CCGAAATTACAATAGTATCA+TGG - chr5_1:38451821-38451840 Msa0730160:CDS 30.0%
CAATTAACTCAAAGAAAGAG+AGG - chr5_1:38451931-38451950 Msa0730160:intron 30.0%
!! GGAAGTGATAAAAGTATCAT+AGG - chr5_1:38452141-38452160 Msa0730160:five_prime_UTR 30.0%
!! AAAAGTATCATAGGACTATG+TGG - chr5_1:38452150-38452169 Msa0730160:five_prime_UTR 30.0%
! AAAGTATCATAGGACTATGT+GGG - chr5_1:38452151-38452170 Msa0730160:five_prime_UTR 30.0%
ATTTACTTAGGTCAATGACC+GGG + chr5_1:38450500-38450519 None:intergenic 35.0%
TAGACCATGCATGTAAAGAA+TGG - chr5_1:38450553-38450572 Msa0730160:CDS 35.0%
AGACCATGCATGTAAAGAAT+GGG - chr5_1:38450554-38450573 Msa0730160:CDS 35.0%
! GCAAAACCAAGAAGATTTTG+AGG - chr5_1:38450765-38450784 Msa0730160:intron 35.0%
CTGAATGGTTGAGGAATATT+TGG + chr5_1:38450895-38450914 None:intergenic 35.0%
CAAATATTCCTCAACCATTC+AGG - chr5_1:38450893-38450912 Msa0730160:intron 35.0%
ATCGACAATTGACAACATTG+TGG + chr5_1:38450956-38450975 None:intergenic 35.0%
! ATTGCTGTTGTTCTGTGATA+CGG + chr5_1:38451065-38451084 None:intergenic 35.0%
CAATAGTACAACTATAGGCA+CGG - chr5_1:38451111-38451130 Msa0730160:CDS 35.0%
TAGGCACGGTTTAACAATAT+TGG - chr5_1:38451125-38451144 Msa0730160:CDS 35.0%
TGTTGTAGTTTGGAGGAAAA+CGG + chr5_1:38451159-38451178 None:intergenic 35.0%
TCTGCAACATGAAACAAAGT+TGG + chr5_1:38451232-38451251 None:intergenic 35.0%
!!! TCCAATGACATTTTCTGGTT+GGG + chr5_1:38451409-38451428 None:intergenic 35.0%
! TTGAGTCCAATGACATTTTC+TGG + chr5_1:38451414-38451433 None:intergenic 35.0%
!!! GCTGCTTTTGTCATAAATGT+TGG - chr5_1:38451543-38451562 Msa0730160:intron 35.0%
! AAATGTTGGAGACATTTTGG+AGG - chr5_1:38451557-38451576 Msa0730160:intron 35.0%
GATGCTTCGATAAATTCCAT+TGG + chr5_1:38451898-38451917 None:intergenic 35.0%
!! GTAAGTGTTTTGAACAATGC+AGG + chr5_1:38452035-38452054 None:intergenic 35.0%
! GTTAGCATATTTGGTAGCTA+AGG - chr5_1:38452204-38452223 Msa0730160:five_prime_UTR 35.0%
ATTTACTTAGGTCAATGACC+GGG + chr5_1:38450500-38450519 None:intergenic 35.0%
TAGACCATGCATGTAAAGAA+TGG - chr5_1:38450553-38450572 Msa0730160:CDS 35.0%
AGACCATGCATGTAAAGAAT+GGG - chr5_1:38450554-38450573 Msa0730160:CDS 35.0%
! GCAAAACCAAGAAGATTTTG+AGG - chr5_1:38450765-38450784 Msa0730160:intron 35.0%
CTGAATGGTTGAGGAATATT+TGG + chr5_1:38450895-38450914 None:intergenic 35.0%
CAAATATTCCTCAACCATTC+AGG - chr5_1:38450893-38450912 Msa0730160:intron 35.0%
ATCGACAATTGACAACATTG+TGG + chr5_1:38450956-38450975 None:intergenic 35.0%
! ATTGCTGTTGTTCTGTGATA+CGG + chr5_1:38451065-38451084 None:intergenic 35.0%
CAATAGTACAACTATAGGCA+CGG - chr5_1:38451111-38451130 Msa0730160:CDS 35.0%
TAGGCACGGTTTAACAATAT+TGG - chr5_1:38451125-38451144 Msa0730160:CDS 35.0%
TGTTGTAGTTTGGAGGAAAA+CGG + chr5_1:38451159-38451178 None:intergenic 35.0%
TCTGCAACATGAAACAAAGT+TGG + chr5_1:38451232-38451251 None:intergenic 35.0%
!!! TCCAATGACATTTTCTGGTT+GGG + chr5_1:38451409-38451428 None:intergenic 35.0%
! TTGAGTCCAATGACATTTTC+TGG + chr5_1:38451414-38451433 None:intergenic 35.0%
!!! GCTGCTTTTGTCATAAATGT+TGG - chr5_1:38451543-38451562 Msa0730160:intron 35.0%
! AAATGTTGGAGACATTTTGG+AGG - chr5_1:38451557-38451576 Msa0730160:intron 35.0%
GATGCTTCGATAAATTCCAT+TGG + chr5_1:38451898-38451917 None:intergenic 35.0%
!! GTAAGTGTTTTGAACAATGC+AGG + chr5_1:38452035-38452054 None:intergenic 35.0%
! GTTAGCATATTTGGTAGCTA+AGG - chr5_1:38452204-38452223 Msa0730160:five_prime_UTR 35.0%
TACGAGTAATAATGCATCGC+TGG - chr5_1:38450321-38450340 Msa0730160:three_prime_UTR 40.0%
GACCATGCATGTAAAGAATG+GGG - chr5_1:38450555-38450574 Msa0730160:CDS 40.0%
ACCATGCATGTAAAGAATGG+GGG - chr5_1:38450556-38450575 Msa0730160:CDS 40.0%
GAGGAGTAATAGTTGAAACC+TGG + chr5_1:38450587-38450606 None:intergenic 40.0%
CGGAGTCAATCCTTTATTGA+TGG - chr5_1:38450678-38450697 Msa0730160:CDS 40.0%
AGAGTTCCTAAGTCTTCCAT+TGG - chr5_1:38450723-38450742 Msa0730160:intron 40.0%
TCTCTTCCAATGGAAGACTT+AGG + chr5_1:38450732-38450751 None:intergenic 40.0%
CAAACCCCTCAAAATCTTCT+TGG + chr5_1:38450774-38450793 None:intergenic 40.0%
!! CAAGAAGATTTTGAGGGGTT+TGG - chr5_1:38450772-38450791 Msa0730160:intron 40.0%
AACATTGTGGCTAGCAAACA+AGG + chr5_1:38450943-38450962 None:intergenic 40.0%
! CGATCTTTGTTGTAGTTTGG+AGG + chr5_1:38451166-38451185 None:intergenic 40.0%
! GAGCGATCTTTGTTGTAGTT+TGG + chr5_1:38451169-38451188 None:intergenic 40.0%
!!! CCAATGACATTTTCTGGTTG+GGG + chr5_1:38451408-38451427 None:intergenic 40.0%
!! GTCCAATGACATTTTCTGGT+TGG + chr5_1:38451410-38451429 None:intergenic 40.0%
ACTCAATCCTCATTCTGATG+CGG - chr5_1:38451428-38451447 Msa0730160:intron 40.0%
TTGGAGACCTTCAATGTCAT+TGG + chr5_1:38451478-38451497 None:intergenic 40.0%
GGTCTCCAAATCAGAAAAGA+TGG - chr5_1:38451489-38451508 Msa0730160:intron 40.0%
CTGCTACTAAGAGTTTCATG+TGG + chr5_1:38451707-38451726 None:intergenic 40.0%
CATGAAACTCTTAGTAGCAG+AGG - chr5_1:38451707-38451726 Msa0730160:CDS 40.0%
! GTACAAAGAGTTTGAGGTGT+CGG + chr5_1:38451791-38451810 None:intergenic 40.0%
CCTACAATGGTTCTCATTTG+AGG + chr5_1:38451981-38452000 None:intergenic 40.0%
CCTCAAATGAGAACCATTGT+AGG - chr5_1:38451978-38451997 Msa0730160:intron 40.0%
! AATATTTTCACGCCAGCTAC+AGG - chr5_1:38452076-38452095 Msa0730160:five_prime_UTR 40.0%
! ATATTTTCACGCCAGCTACA+GGG - chr5_1:38452077-38452096 Msa0730160:five_prime_UTR 40.0%
TACGAGTAATAATGCATCGC+TGG - chr5_1:38450321-38450340 Msa0730160:three_prime_UTR 40.0%
GACCATGCATGTAAAGAATG+GGG - chr5_1:38450555-38450574 Msa0730160:CDS 40.0%
ACCATGCATGTAAAGAATGG+GGG - chr5_1:38450556-38450575 Msa0730160:CDS 40.0%
GAGGAGTAATAGTTGAAACC+TGG + chr5_1:38450587-38450606 None:intergenic 40.0%
CGGAGTCAATCCTTTATTGA+TGG - chr5_1:38450678-38450697 Msa0730160:CDS 40.0%
AGAGTTCCTAAGTCTTCCAT+TGG - chr5_1:38450723-38450742 Msa0730160:intron 40.0%
TCTCTTCCAATGGAAGACTT+AGG + chr5_1:38450732-38450751 None:intergenic 40.0%
CAAACCCCTCAAAATCTTCT+TGG + chr5_1:38450774-38450793 None:intergenic 40.0%
!! CAAGAAGATTTTGAGGGGTT+TGG - chr5_1:38450772-38450791 Msa0730160:intron 40.0%
AACATTGTGGCTAGCAAACA+AGG + chr5_1:38450943-38450962 None:intergenic 40.0%
! CGATCTTTGTTGTAGTTTGG+AGG + chr5_1:38451166-38451185 None:intergenic 40.0%
! GAGCGATCTTTGTTGTAGTT+TGG + chr5_1:38451169-38451188 None:intergenic 40.0%
!!! CCAATGACATTTTCTGGTTG+GGG + chr5_1:38451408-38451427 None:intergenic 40.0%
!! GTCCAATGACATTTTCTGGT+TGG + chr5_1:38451410-38451429 None:intergenic 40.0%
ACTCAATCCTCATTCTGATG+CGG - chr5_1:38451428-38451447 Msa0730160:intron 40.0%
TTGGAGACCTTCAATGTCAT+TGG + chr5_1:38451478-38451497 None:intergenic 40.0%
GGTCTCCAAATCAGAAAAGA+TGG - chr5_1:38451489-38451508 Msa0730160:intron 40.0%
CTGCTACTAAGAGTTTCATG+TGG + chr5_1:38451707-38451726 None:intergenic 40.0%
CATGAAACTCTTAGTAGCAG+AGG - chr5_1:38451707-38451726 Msa0730160:CDS 40.0%
! GTACAAAGAGTTTGAGGTGT+CGG + chr5_1:38451791-38451810 None:intergenic 40.0%
CCTACAATGGTTCTCATTTG+AGG + chr5_1:38451981-38452000 None:intergenic 40.0%
CCTCAAATGAGAACCATTGT+AGG - chr5_1:38451978-38451997 Msa0730160:intron 40.0%
! AATATTTTCACGCCAGCTAC+AGG - chr5_1:38452076-38452095 Msa0730160:five_prime_UTR 40.0%
! ATATTTTCACGCCAGCTACA+GGG - chr5_1:38452077-38452096 Msa0730160:five_prime_UTR 40.0%
AACTCCCTTACAACAAGTCC+CGG - chr5_1:38450479-38450498 Msa0730160:CDS 45.0%
!! ATGACCGGGACTTGTTGTAA+GGG + chr5_1:38450486-38450505 None:intergenic 45.0%
!! AATGACCGGGACTTGTTGTA+AGG + chr5_1:38450487-38450506 None:intergenic 45.0%
ACCCCCATTCTTTACATGCA+TGG + chr5_1:38450560-38450579 None:intergenic 45.0%
TAAAGAATGGGGGTTCTTCC+AGG - chr5_1:38450566-38450585 Msa0730160:CDS 45.0%
TAAACGGGGATTCCTTGCAT+AGG + chr5_1:38450869-38450888 None:intergenic 45.0%
TTGTGGCTAGCAAACAAGGA+TGG + chr5_1:38450939-38450958 None:intergenic 45.0%
!!! ACATTTTCTGGTTGGGGACA+AGG + chr5_1:38451402-38451421 None:intergenic 45.0%
CCCCAACCAGAAAATGTCAT+TGG - chr5_1:38451405-38451424 Msa0730160:intron 45.0%
CTCAATCCTCATTCTGATGC+GGG - chr5_1:38451429-38451448 Msa0730160:intron 45.0%
!! CAATGTCATTGGCTTGGAGA+AGG + chr5_1:38451467-38451486 None:intergenic 45.0%
CTCCAAGCCAATGACATTGA+AGG - chr5_1:38451468-38451487 Msa0730160:intron 45.0%
! GACCTTCAATGTCATTGGCT+TGG + chr5_1:38451473-38451492 None:intergenic 45.0%
GTTGTGCAGATACTGACCAA+TGG - chr5_1:38451879-38451898 Msa0730160:CDS 45.0%
AGGTCTGTGGAAAGCTACAA+TGG + chr5_1:38451961-38451980 None:intergenic 45.0%
! TGGTTCTCATTTGAGGTCTG+TGG + chr5_1:38451974-38451993 None:intergenic 45.0%
!! TCTTGGTGTTGGACCTACAA+TGG + chr5_1:38451994-38452013 None:intergenic 45.0%
CTTTCAGGGGTAACAAGTCT+TGG + chr5_1:38452011-38452030 None:intergenic 45.0%
!! CAAGACTTGTTACCCCTGAA+AGG - chr5_1:38452009-38452028 Msa0730160:intron 45.0%
TGAACAATGCAGGCCTTTCA+GGG + chr5_1:38452025-38452044 None:intergenic 45.0%
TTGAACAATGCAGGCCTTTC+AGG + chr5_1:38452026-38452045 None:intergenic 45.0%
! TATTTTCACGCCAGCTACAG+GGG - chr5_1:38452078-38452097 Msa0730160:five_prime_UTR 45.0%
AACTCCCTTACAACAAGTCC+CGG - chr5_1:38450479-38450498 Msa0730160:CDS 45.0%
!! ATGACCGGGACTTGTTGTAA+GGG + chr5_1:38450486-38450505 None:intergenic 45.0%
!! AATGACCGGGACTTGTTGTA+AGG + chr5_1:38450487-38450506 None:intergenic 45.0%
ACCCCCATTCTTTACATGCA+TGG + chr5_1:38450560-38450579 None:intergenic 45.0%
TAAAGAATGGGGGTTCTTCC+AGG - chr5_1:38450566-38450585 Msa0730160:CDS 45.0%
TAAACGGGGATTCCTTGCAT+AGG + chr5_1:38450869-38450888 None:intergenic 45.0%
TTGTGGCTAGCAAACAAGGA+TGG + chr5_1:38450939-38450958 None:intergenic 45.0%
!!! ACATTTTCTGGTTGGGGACA+AGG + chr5_1:38451402-38451421 None:intergenic 45.0%
CCCCAACCAGAAAATGTCAT+TGG - chr5_1:38451405-38451424 Msa0730160:intron 45.0%
CTCAATCCTCATTCTGATGC+GGG - chr5_1:38451429-38451448 Msa0730160:intron 45.0%
!! CAATGTCATTGGCTTGGAGA+AGG + chr5_1:38451467-38451486 None:intergenic 45.0%
CTCCAAGCCAATGACATTGA+AGG - chr5_1:38451468-38451487 Msa0730160:intron 45.0%
! GACCTTCAATGTCATTGGCT+TGG + chr5_1:38451473-38451492 None:intergenic 45.0%
GTTGTGCAGATACTGACCAA+TGG - chr5_1:38451879-38451898 Msa0730160:CDS 45.0%
AGGTCTGTGGAAAGCTACAA+TGG + chr5_1:38451961-38451980 None:intergenic 45.0%
! TGGTTCTCATTTGAGGTCTG+TGG + chr5_1:38451974-38451993 None:intergenic 45.0%
!! TCTTGGTGTTGGACCTACAA+TGG + chr5_1:38451994-38452013 None:intergenic 45.0%
CTTTCAGGGGTAACAAGTCT+TGG + chr5_1:38452011-38452030 None:intergenic 45.0%
!! CAAGACTTGTTACCCCTGAA+AGG - chr5_1:38452009-38452028 Msa0730160:intron 45.0%
TGAACAATGCAGGCCTTTCA+GGG + chr5_1:38452025-38452044 None:intergenic 45.0%
TTGAACAATGCAGGCCTTTC+AGG + chr5_1:38452026-38452045 None:intergenic 45.0%
! TATTTTCACGCCAGCTACAG+GGG - chr5_1:38452078-38452097 Msa0730160:five_prime_UTR 45.0%
CGACTCTTCCATCCTATGCA+AGG - chr5_1:38450854-38450873 Msa0730160:intron 50.0%
!!! TTTTCTGGTTGGGGACAAGG+AGG + chr5_1:38451399-38451418 None:intergenic 50.0%
GGCTTGGAGAAGGATGGTTA+AGG + chr5_1:38451457-38451476 None:intergenic 50.0%
!! GTCATTGGCTTGGAGAAGGA+TGG + chr5_1:38451463-38451482 None:intergenic 50.0%
!! ACAAAAGCAGCATCGGTGAG+TGG + chr5_1:38451534-38451553 None:intergenic 50.0%
! GGGGTAACAAGTCTTGGTGT+TGG + chr5_1:38452005-38452024 None:intergenic 50.0%
GAACAATGCAGGCCTTTCAG+GGG + chr5_1:38452024-38452043 None:intergenic 50.0%
GACATGATTTCCCCTGTAGC+TGG + chr5_1:38452091-38452110 None:intergenic 50.0%
CGACTCTTCCATCCTATGCA+AGG - chr5_1:38450854-38450873 Msa0730160:intron 50.0%
!!! TTTTCTGGTTGGGGACAAGG+AGG + chr5_1:38451399-38451418 None:intergenic 50.0%
GGCTTGGAGAAGGATGGTTA+AGG + chr5_1:38451457-38451476 None:intergenic 50.0%
!! GTCATTGGCTTGGAGAAGGA+TGG + chr5_1:38451463-38451482 None:intergenic 50.0%
!! ACAAAAGCAGCATCGGTGAG+TGG + chr5_1:38451534-38451553 None:intergenic 50.0%
! GGGGTAACAAGTCTTGGTGT+TGG + chr5_1:38452005-38452024 None:intergenic 50.0%
GAACAATGCAGGCCTTTCAG+GGG + chr5_1:38452024-38452043 None:intergenic 50.0%
GACATGATTTCCCCTGTAGC+TGG + chr5_1:38452091-38452110 None:intergenic 50.0%
CGGGGATTCCTTGCATAGGA+TGG + chr5_1:38450865-38450884 None:intergenic 55.0%
! AAGGCACCCGCATCAGAATG+AGG + chr5_1:38451438-38451457 None:intergenic 55.0%
CGGGGATTCCTTGCATAGGA+TGG + chr5_1:38450865-38450884 None:intergenic 55.0%
! AAGGCACCCGCATCAGAATG+AGG + chr5_1:38451438-38451457 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 38450308 38452290 38450308 ID=Msa0730160;Name=Msa0730160
chr5_1 mRNA 38450308 38452290 38450308 ID=Msa0730160-mRNA-1;Parent=Msa0730160;Name=Msa0730160-mRNA-1;_AED=0.07;_eAED=0.07;_QI=310|1|1|1|0.66|0.5|4|142|268
chr5_1 exon 38450308 38450710 38450308 ID=Msa0730160-mRNA-1:exon:11534;Parent=Msa0730160-mRNA-1
chr5_1 exon 38451020 38451347 38451020 ID=Msa0730160-mRNA-1:exon:11533;Parent=Msa0730160-mRNA-1
chr5_1 exon 38451684 38451931 38451684 ID=Msa0730160-mRNA-1:exon:11532;Parent=Msa0730160-mRNA-1
chr5_1 exon 38452011 38452290 38452011 ID=Msa0730160-mRNA-1:exon:11531;Parent=Msa0730160-mRNA-1
chr5_1 five_prime_UTR 38452011 38452290 38452011 ID=Msa0730160-mRNA-1:five_prime_utr;Parent=Msa0730160-mRNA-1
chr5_1 five_prime_UTR 38451902 38451931 38451902 ID=Msa0730160-mRNA-1:five_prime_utr;Parent=Msa0730160-mRNA-1
chr5_1 CDS 38451684 38451901 38451684 ID=Msa0730160-mRNA-1:cds;Parent=Msa0730160-mRNA-1
chr5_1 CDS 38451020 38451347 38451020 ID=Msa0730160-mRNA-1:cds;Parent=Msa0730160-mRNA-1
chr5_1 CDS 38450450 38450710 38450450 ID=Msa0730160-mRNA-1:cds;Parent=Msa0730160-mRNA-1
chr5_1 three_prime_UTR 38450308 38450449 38450308 ID=Msa0730160-mRNA-1:three_prime_utr;Parent=Msa0730160-mRNA-1
Gene Sequence

>Msa0730160

ATGGAAAATGTGAAGATAGGTGTTCAAGAGTTCCTAAGTCTTCCATTGGAAGAGAAGAAGAAATTTTGGCAAAACCAAGAAGATTTTGAGGGGTTTGGTCAACTGCATGTTGTATCTGAGAATCAAAAGTTAGAATGGGCAGATTTATTCTTCACTACGACTCTTCCATCCTATGCAAGGAATCCCCGTTTATTTCCAAATATTCCTCAACCATTCAGAGATAATTTAGAAACCTATTGTTTAGAATTGAAAAATGTTTGCATCACAATCATCAAACATATGTCAAAAGCTCTTAAAGTTGAACCAAATGAACTGCTAGACTTAATTGATGATATAACTCAATCAATGAGGATGAATTACTATCCTCCTTGTCCCCAACCAGAAAATGTCATTGGACTCAATCCTCATTCTGATGCGGGTGCCTTAACCATCCTTCTCCAAGCCAATGACATTGAAGGTCTCCAAATCAGAAAAGATGGACATTGGATTTCTGTTAAACCACTCACCGATGCTGCTTTTGTCATAAATGTTGGAGACATTTTGGAGATACTGACCAATGGAATTTATCGAAGCATCGAACATCGAGCTACAATTAACTCAAAGAAAGAGAGGATTTCCATTGTAGCTTTCCACAGACCTCAAATGAGAACCATTGTAGGTCCAACACCAAGACTTGTTACCCCTGAAAGGCCTGCATTGTTCAAAACACTTACAGTTGAAGATTACTACAAAGTAATATTTTCACGCCAGCTACAGGGGAAATCATGTCTTGATCTTATGAGAATTCAAAAAGATAATAGGAAGTGA

Protein sequence

>Msa0730160

MENVKIGVQEFLSLPLEEKKKFWQNQEDFEGFGQLHVVSENQKLEWADLFFTTTLPSYARNPRLFPNIPQPFRDNLETYCLELKNVCITIIKHMSKALKVEPNELLDLIDDITQSMRMNYYPPCPQPENVIGLNPHSDAGALTILLQANDIEGLQIRKDGHWISVKPLTDAAFVINVGDILEILTNGIYRSIEHRATINSKKERISIVAFHRPQMRTIVGPTPRLVTPERPALFKTLTVEDYYKVIFSRQLQGKSCLDLMRIQKDNRK*