Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783960 | sp|O81223|CNBL4_ARATH | 62.245 | 196 | 71 | 1 | 7 | 199 | 19 | 214 | 3.48e-85 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783960 | A0A396GEZ0 | 90.594 | 202 | 16 | 1 | 4 | 202 | 35 | 236 | 1.77e-128 | 370 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0783960 | 0.830447 | 2.921171e-55 | -8.615850e-47 |
| Msa0010490 | Msa0783960 | 0.840372 | 9.045955e-58 | -8.615850e-47 |
| Msa0010500 | Msa0783960 | 0.825994 | 3.460673e-54 | -8.615850e-47 |
| Msa0015930 | Msa0783960 | 0.804942 | 1.695832e-49 | -8.615850e-47 |
| Msa0020390 | Msa0783960 | 0.812796 | 3.540330e-51 | -8.615850e-47 |
| Msa0032580 | Msa0783960 | 0.801168 | 1.022677e-48 | -8.615850e-47 |
| Msa0033110 | Msa0783960 | 0.837666 | 4.543774e-57 | -8.615850e-47 |
| Msa0033260 | Msa0783960 | 0.826906 | 2.097229e-54 | -8.615850e-47 |
| Msa0036540 | Msa0783960 | 0.826000 | 3.449245e-54 | -8.615850e-47 |
| Msa0037540 | Msa0783960 | -0.833334 | 5.661051e-56 | -8.615850e-47 |
| Msa0037590 | Msa0783960 | -0.829244 | 5.736090e-55 | -8.615850e-47 |
| Msa0054750 | Msa0783960 | 0.801807 | 7.563098e-49 | -8.615850e-47 |
| Msa0059950 | Msa0783960 | 0.814651 | 1.382153e-51 | -8.615850e-47 |
| Msa0071250 | Msa0783960 | 0.810297 | 1.236440e-50 | -8.615850e-47 |
| Msa0089820 | Msa0783960 | 0.811673 | 6.223274e-51 | -8.615850e-47 |
| Msa0090520 | Msa0783960 | 0.808981 | 2.370591e-50 | -8.615850e-47 |
| Msa0090550 | Msa0783960 | 0.807009 | 6.230619e-50 | -8.615850e-47 |
| Msa0091410 | Msa0783960 | 0.829394 | 5.274552e-55 | -8.615850e-47 |
| Msa0092410 | Msa0783960 | 0.800510 | 1.393583e-48 | -8.615850e-47 |
| Msa0104230 | Msa0783960 | 0.821313 | 4.313697e-53 | -8.615850e-47 |
| Msa0104240 | Msa0783960 | 0.816876 | 4.411022e-52 | -8.615850e-47 |
| Msa0112770 | Msa0783960 | 0.802318 | 5.939360e-49 | -8.615850e-47 |
| Msa0610130 | Msa0783960 | 0.846627 | 1.928292e-59 | -8.615850e-47 |
| Msa0610180 | Msa0783960 | 0.855113 | 7.843296e-62 | -8.615850e-47 |
| Msa0617640 | Msa0783960 | 0.803075 | 4.144972e-49 | -8.615850e-47 |
| Msa0620620 | Msa0783960 | 0.800928 | 1.144741e-48 | -8.615850e-47 |
| Msa0631350 | Msa0783960 | 0.805936 | 1.049384e-49 | -8.615850e-47 |
| Msa0643320 | Msa0783960 | 0.821877 | 3.195829e-53 | -8.615850e-47 |
| Msa0682090 | Msa0783960 | 0.810915 | 9.091387e-51 | -8.615850e-47 |
| Msa0682140 | Msa0783960 | 0.815146 | 1.073696e-51 | -8.615850e-47 |
| Msa0683140 | Msa0783960 | 0.815655 | 8.271006e-52 | -8.615850e-47 |
| Msa0683600 | Msa0783960 | 0.813447 | 2.548015e-51 | -8.615850e-47 |
| Msa0685140 | Msa0783960 | 0.806032 | 1.001549e-49 | -8.615850e-47 |
| Msa0698800 | Msa0783960 | 0.805266 | 1.450554e-49 | -8.615850e-47 |
| Msa0703910 | Msa0783960 | 0.853954 | 1.698110e-61 | -8.615850e-47 |
| Msa0705990 | Msa0783960 | 0.801577 | 8.434210e-49 | -8.615850e-47 |
| Msa0706400 | Msa0783960 | 0.812535 | 4.038090e-51 | -8.615850e-47 |
| Msa0707250 | Msa0783960 | 0.825946 | 3.552591e-54 | -8.615850e-47 |
| Msa0711150 | Msa0783960 | 0.805762 | 1.141185e-49 | -8.615850e-47 |
| Msa0738030 | Msa0783960 | 0.803971 | 2.702638e-49 | -8.615850e-47 |
| Msa0741440 | Msa0783960 | 0.831089 | 2.033539e-55 | -8.615850e-47 |
| Msa0742150 | Msa0783960 | 0.808854 | 2.523679e-50 | -8.615850e-47 |
| Msa0750850 | Msa0783960 | 0.825469 | 4.609618e-54 | -8.615850e-47 |
| Msa0751850 | Msa0783960 | 0.816025 | 6.841496e-52 | -8.615850e-47 |
| Msa0763920 | Msa0783960 | 0.802097 | 6.593275e-49 | -8.615850e-47 |
| Msa0783960 | Msa0800370 | 0.820331 | 7.257304e-53 | -8.615850e-47 |
| Msa0783960 | Msa0817460 | 0.817306 | 3.530372e-52 | -8.615850e-47 |
| Msa0783960 | Msa0822310 | -0.804748 | 1.861211e-49 | -8.615850e-47 |
| Msa0783960 | Msa0822500 | 0.832429 | 9.503904e-56 | -8.615850e-47 |
| Msa0783960 | Msa0831850 | 0.802909 | 4.484327e-49 | -8.615850e-47 |
| Msa0783960 | Msa0861470 | 0.817775 | 2.768437e-52 | -8.615850e-47 |
| Msa0783960 | Msa0861570 | 0.830096 | 3.560417e-55 | -8.615850e-47 |
| Msa0783960 | Msa0865030 | 0.818513 | 1.885230e-52 | -8.615850e-47 |
| Msa0783960 | Msa0876810 | 0.802580 | 5.244579e-49 | -8.615850e-47 |
| Msa0783960 | Msa0887250 | 0.826206 | 3.081233e-54 | -8.615850e-47 |
| Msa0783960 | Msa0890550 | 0.852228 | 5.296048e-61 | -8.615850e-47 |
| Msa0783960 | Msa0894710 | 0.828821 | 7.262931e-55 | -8.615850e-47 |
| Msa0783960 | Msa0918390 | 0.805247 | 1.463946e-49 | -8.615850e-47 |
| Msa0783960 | Msa0945440 | 0.803753 | 2.998923e-49 | -8.615850e-47 |
| Msa0783960 | Msa0994370 | 0.801690 | 7.995819e-49 | -8.615850e-47 |
| Msa0783960 | Msa1001390 | 0.802710 | 4.931345e-49 | -8.615850e-47 |
| Msa0783960 | Msa1025080 | 0.813796 | 2.134644e-51 | -8.615850e-47 |
| Msa0783960 | Msa1029050 | 0.808818 | 2.569676e-50 | -8.615850e-47 |
| Msa0783960 | Msa1036610 | 0.812786 | 3.558610e-51 | -8.615850e-47 |
| Msa0783960 | Msa1064250 | 0.827824 | 1.263505e-54 | -8.615850e-47 |
| Msa0783960 | Msa1071320 | 0.829460 | 5.084582e-55 | -8.615850e-47 |
| Msa0783960 | Msa1077030 | 0.803220 | 3.868052e-49 | -8.615850e-47 |
| Msa0783960 | Msa1081790 | -0.833335 | 5.656955e-56 | -8.615850e-47 |
| Msa0783960 | Msa1089320 | 0.826823 | 2.195498e-54 | -8.615850e-47 |
| Msa0783960 | Msa1089460 | 0.841648 | 4.183875e-58 | -8.615850e-47 |
| Msa0783960 | Msa1091940 | 0.833779 | 4.383923e-56 | -8.615850e-47 |
| Msa0783960 | Msa1104560 | 0.812804 | 3.526184e-51 | -8.615850e-47 |
| Msa0783960 | Msa1109090 | 0.805092 | 1.577012e-49 | -8.615850e-47 |
| Msa0783960 | Msa1109680 | 0.812758 | 3.608030e-51 | -8.615850e-47 |
| Msa0783960 | Msa1111870 | 0.820723 | 5.899255e-53 | -8.615850e-47 |
| Msa0783960 | Msa1133230 | 0.849979 | 2.283679e-60 | -8.615850e-47 |
| Msa0783960 | Msa1133250 | 0.806071 | 9.828799e-50 | -8.615850e-47 |
| Msa0783960 | Msa1144040 | 0.832150 | 1.114006e-55 | -8.615850e-47 |
| Msa0783960 | Msa1152920 | 0.808073 | 3.704122e-50 | -8.615850e-47 |
| Msa0783960 | Msa1160590 | 0.804595 | 2.003069e-49 | -8.615850e-47 |
| Msa0783960 | Msa1162780 | 0.803061 | 4.172704e-49 | -8.615850e-47 |
| Msa0783960 | Msa1166090 | -0.826164 | 3.153179e-54 | -8.615850e-47 |
| Msa0783960 | Msa1175200 | 0.809475 | 1.858273e-50 | -8.615850e-47 |
| Msa0783960 | Msa1176710 | 0.953456 | 2.636121e-111 | -8.615850e-47 |
| Msa0783960 | Msa1176720 | 0.872834 | 2.344737e-67 | -8.615850e-47 |
| Msa0783960 | Msa1180500 | 0.846066 | 2.743130e-59 | -8.615850e-47 |
| Msa0783960 | Msa1181250 | 0.840427 | 8.752649e-58 | -8.615850e-47 |
| Msa0783960 | Msa1181330 | 0.839165 | 1.865417e-57 | -8.615850e-47 |
| Msa0783960 | Msa1206310 | 0.830273 | 3.222138e-55 | -8.615850e-47 |
| Msa0783960 | Msa1206360 | 0.834716 | 2.551456e-56 | -8.615850e-47 |
| Msa0783960 | Msa1206850 | 0.802086 | 6.628803e-49 | -8.615850e-47 |
| Msa0783960 | Msa1207310 | 0.805878 | 1.079140e-49 | -8.615850e-47 |
| Msa0783960 | Msa1209200 | 0.825747 | 3.959054e-54 | -8.615850e-47 |
| Msa0783960 | Msa1231840 | 0.876726 | 1.110125e-68 | -8.615850e-47 |
| Msa0783960 | Msa1242580 | -0.803421 | 3.513645e-49 | -8.615850e-47 |
| Msa0783960 | Msa1254730 | 0.818318 | 2.086655e-52 | -8.615850e-47 |
| Msa0783960 | Msa1270660 | 0.815994 | 6.948923e-52 | -8.615850e-47 |
| Msa0783960 | Msa1274560 | 0.822216 | 2.666667e-53 | -8.615850e-47 |
| Msa0783960 | Msa1294820 | 0.812573 | 3.961460e-51 | -8.615850e-47 |
| Msa0783960 | Msa1302850 | 0.803146 | 4.007571e-49 | -8.615850e-47 |
| Msa0783960 | Msa1306560 | 0.803115 | 4.066328e-49 | -8.615850e-47 |
| Msa0783960 | Msa1307180 | 0.833569 | 4.947528e-56 | -8.615850e-47 |
| Msa0783960 | Msa1312520 | 0.846022 | 2.820017e-59 | -8.615850e-47 |
| Msa0783960 | Msa1316360 | 0.854478 | 1.198216e-61 | -8.615850e-47 |
| Msa0783960 | Msa1336560 | 0.822895 | 1.854539e-53 | -8.615850e-47 |
| Msa0783960 | Msa1346840 | 0.841431 | 4.770953e-58 | -8.615850e-47 |
| Msa0783960 | Msa1351540 | 0.815959 | 7.077391e-52 | -8.615850e-47 |
| Msa0783960 | Msa1355890 | 0.826545 | 2.557403e-54 | -8.615850e-47 |
| Msa0783960 | Msa1359630 | 0.803949 | 2.731244e-49 | -8.615850e-47 |
| Msa0783960 | Msa1364210 | 0.823707 | 1.198223e-53 | -8.615850e-47 |
| Msa0783960 | Msa1368360 | 0.822189 | 2.705471e-53 | -8.615850e-47 |
| Msa0783960 | Msa1372280 | 0.805056 | 1.605040e-49 | -8.615850e-47 |
| Msa0783960 | Msa1381480 | 0.807680 | 4.490607e-50 | -8.615850e-47 |
| Msa0783960 | Msa1382790 | 0.800713 | 1.266869e-48 | -8.615850e-47 |
| Msa0783960 | Msa1388860 | 0.800680 | 1.286533e-48 | -8.615850e-47 |
| Msa0783960 | Msa1393570 | 0.806350 | 8.586342e-50 | -8.615850e-47 |
| Msa0783960 | Msa1395730 | 0.833308 | 5.747741e-56 | -8.615850e-47 |
| Msa0783960 | Msa1396400 | -0.824904 | 6.269246e-54 | -8.615850e-47 |
| Msa0783960 | Msa1400580 | 0.800766 | 1.235365e-48 | -8.615850e-47 |
| Msa0783960 | Msa1403340 | 0.809795 | 1.585925e-50 | -8.615850e-47 |
| Msa0783960 | Msa1407190 | 0.817068 | 3.994774e-52 | -8.615850e-47 |
| Msa0783960 | Msa1412130 | 0.855664 | 5.421899e-62 | -8.615850e-47 |
| Msa0783960 | Msa1419870 | 0.807883 | 4.066346e-50 | -8.615850e-47 |
| Msa0783960 | Msa1421040 | 0.867398 | 1.409076e-65 | -8.615850e-47 |
| Msa0783960 | Msa1425260 | 0.834464 | 2.952254e-56 | -8.615850e-47 |
| Msa0783960 | Msa1436520 | 0.815336 | 9.740171e-52 | -8.615850e-47 |
| Msa0783960 | Msa1437270 | 0.821515 | 3.875027e-53 | -8.615850e-47 |
| Msa0783960 | Msa1445390 | -0.815911 | 7.252431e-52 | -8.615850e-47 |
| Msa0783960 | Msa1449340 | -0.828072 | 1.101806e-54 | -8.615850e-47 |
| Msa0783960 | Msa1455130 | 0.811065 | 8.433685e-51 | -8.615850e-47 |
| Msa0127020 | Msa0783960 | 0.803010 | 4.274633e-49 | -8.615850e-47 |
| Msa0129190 | Msa0783960 | -0.830418 | 2.969268e-55 | -8.615850e-47 |
| Msa0137990 | Msa0783960 | 0.810418 | 1.164394e-50 | -8.615850e-47 |
| Msa0138020 | Msa0783960 | 0.820571 | 6.394387e-53 | -8.615850e-47 |
| Msa0140500 | Msa0783960 | -0.819214 | 1.306356e-52 | -8.615850e-47 |
| Msa0148080 | Msa0783960 | 0.827862 | 1.237315e-54 | -8.615850e-47 |
| Msa0156370 | Msa0783960 | 0.800421 | 1.452990e-48 | -8.615850e-47 |
| Msa0160960 | Msa0783960 | 0.808950 | 2.407180e-50 | -8.615850e-47 |
| Msa0171540 | Msa0783960 | 0.815749 | 7.882900e-52 | -8.615850e-47 |
| Msa0178800 | Msa0783960 | 0.827959 | 1.172525e-54 | -8.615850e-47 |
| Msa0189300 | Msa0783960 | 0.818277 | 2.131484e-52 | -8.615850e-47 |
| Msa0189520 | Msa0783960 | 0.813492 | 2.491042e-51 | -8.615850e-47 |
| Msa0202410 | Msa0783960 | 0.803805 | 2.925696e-49 | -8.615850e-47 |
| Msa0209500 | Msa0783960 | 0.811670 | 6.233212e-51 | -8.615850e-47 |
| Msa0217700 | Msa0783960 | 0.831885 | 1.294963e-55 | -8.615850e-47 |
| Msa0229170 | Msa0783960 | 0.812008 | 5.261604e-51 | -8.615850e-47 |
| Msa0231660 | Msa0783960 | 0.807978 | 3.882121e-50 | -8.615850e-47 |
| Msa0233370 | Msa0783960 | 0.814848 | 1.250023e-51 | -8.615850e-47 |
| Msa0371250 | Msa0783960 | 0.801849 | 7.414010e-49 | -8.615850e-47 |
| Msa0380100 | Msa0783960 | 0.824818 | 6.568170e-54 | -8.615850e-47 |
| Msa0383800 | Msa0783960 | 0.828770 | 7.475183e-55 | -8.615850e-47 |
| Msa0385490 | Msa0783960 | 0.835687 | 1.451290e-56 | -8.615850e-47 |
| Msa0385500 | Msa0783960 | 0.803785 | 2.954060e-49 | -8.615850e-47 |
| Msa0389210 | Msa0783960 | 0.806995 | 6.272866e-50 | -8.615850e-47 |
| Msa0412840 | Msa0783960 | 0.811932 | 5.465363e-51 | -8.615850e-47 |
| Msa0427580 | Msa0783960 | 0.809610 | 1.738327e-50 | -8.615850e-47 |
| Msa0434180 | Msa0783960 | 0.826750 | 2.285276e-54 | -8.615850e-47 |
| Msa0437400 | Msa0783960 | 0.801100 | 1.055977e-48 | -8.615850e-47 |
| Msa0450480 | Msa0783960 | 0.811390 | 7.170493e-51 | -8.615850e-47 |
| Msa0457510 | Msa0783960 | 0.807128 | 5.880870e-50 | -8.615850e-47 |
| Msa0464100 | Msa0783960 | 0.816117 | 6.525153e-52 | -8.615850e-47 |
| Msa0464120 | Msa0783960 | 0.815332 | 9.759055e-52 | -8.615850e-47 |
| Msa0469620 | Msa0783960 | -0.811676 | 6.213561e-51 | -8.615850e-47 |
| Msa0481030 | Msa0783960 | 0.821228 | 4.514672e-53 | -8.615850e-47 |
| Msa0481280 | Msa0783960 | 0.841134 | 5.713377e-58 | -8.615850e-47 |
| Msa0241140 | Msa0783960 | 0.837322 | 5.567437e-57 | -8.615850e-47 |
| Msa0257500 | Msa0783960 | 0.827642 | 1.398020e-54 | -8.615850e-47 |
| Msa0257520 | Msa0783960 | 0.836925 | 7.029939e-57 | -8.615850e-47 |
| Msa0278580 | Msa0783960 | 0.842109 | 3.160723e-58 | -8.615850e-47 |
| Msa0279220 | Msa0783960 | 0.809038 | 2.304864e-50 | -8.615850e-47 |
| Msa0279240 | Msa0783960 | 0.825309 | 5.027618e-54 | -8.615850e-47 |
| Msa0281530 | Msa0783960 | 0.800941 | 1.137970e-48 | -8.615850e-47 |
| Msa0296820 | Msa0783960 | 0.818190 | 2.230906e-52 | -8.615850e-47 |
| Msa0305410 | Msa0783960 | 0.800681 | 1.285771e-48 | -8.615850e-47 |
| Msa0309880 | Msa0783960 | 0.802541 | 5.341736e-49 | -8.615850e-47 |
| Msa0317960 | Msa0783960 | 0.823085 | 1.674847e-53 | -8.615850e-47 |
| Msa0317970 | Msa0783960 | 0.810994 | 8.738255e-51 | -8.615850e-47 |
| Msa0318980 | Msa0783960 | 0.811298 | 7.507173e-51 | -8.615850e-47 |
| Msa0357900 | Msa0783960 | 0.813487 | 2.496492e-51 | -8.615850e-47 |
| Msa0358860 | Msa0783960 | 0.812344 | 4.445867e-51 | -8.615850e-47 |
| Msa0489410 | Msa0783960 | 0.800190 | 1.618746e-48 | -8.615850e-47 |
| Msa0500470 | Msa0783960 | 0.807559 | 4.764433e-50 | -8.615850e-47 |
| Msa0510930 | Msa0783960 | 0.832546 | 8.887281e-56 | -8.615850e-47 |
| Msa0518170 | Msa0783960 | 0.821051 | 4.958032e-53 | -8.615850e-47 |
| Msa0542090 | Msa0783960 | 0.811055 | 8.478330e-51 | -8.615850e-47 |
| Msa0542130 | Msa0783960 | 0.810245 | 1.268601e-50 | -8.615850e-47 |
| Msa0544840 | Msa0783960 | 0.807365 | 5.238540e-50 | -8.615850e-47 |
| Msa0555450 | Msa0783960 | 0.801199 | 1.007575e-48 | -8.615850e-47 |
| Msa0581280 | Msa0783960 | 0.830621 | 2.649293e-55 | -8.615850e-47 |
| Msa0601150 | Msa0783960 | 0.801558 | 8.509939e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783960 | MtrunA17_Chr8g0346911 | 90.594 | 202 | 16 | 1 | 4 | 202 | 35 | 236 | 3.40e-132 | 370 |
| Msa0783960 | MtrunA17_Chr8g0388331 | 59.474 | 190 | 77 | 0 | 10 | 199 | 21 | 210 | 5.61e-81 | 239 |
| Msa0783960 | MtrunA17_Chr4g0055421 | 55.135 | 185 | 83 | 0 | 15 | 199 | 26 | 210 | 1.87e-73 | 221 |
| Msa0783960 | MtrunA17_Chr4g0076551 | 54.891 | 184 | 83 | 0 | 17 | 200 | 44 | 227 | 1.78e-72 | 219 |
| Msa0783960 | MtrunA17_Chr3g0102821 | 54.891 | 184 | 83 | 0 | 17 | 200 | 43 | 226 | 4.08e-72 | 218 |
| Msa0783960 | MtrunA17_Chr1g0151621 | 57.459 | 181 | 77 | 0 | 17 | 197 | 67 | 247 | 5.01e-72 | 218 |
| Msa0783960 | MtrunA17_Chr2g0290771 | 54.301 | 186 | 85 | 0 | 15 | 200 | 6 | 191 | 5.14e-72 | 216 |
| Msa0783960 | MtrunA17_Chr5g0446931 | 54.348 | 184 | 84 | 0 | 17 | 200 | 43 | 226 | 3.73e-71 | 215 |
| Msa0783960 | MtrunA17_Chr2g0290781 | 48.925 | 186 | 95 | 0 | 17 | 202 | 48 | 233 | 1.78e-60 | 189 |
| Msa0783960 | MtrunA17_Chr2g0290751 | 54.545 | 165 | 75 | 0 | 17 | 181 | 46 | 210 | 1.04e-59 | 186 |
| Msa0783960 | MtrunA17_Chr2g0290761 | 53.939 | 165 | 76 | 0 | 17 | 181 | 46 | 210 | 4.68e-58 | 181 |
| Msa0783960 | MtrunA17_Chr8g0341941 | 52.247 | 178 | 85 | 0 | 18 | 195 | 74 | 251 | 5.85e-58 | 183 |
| Msa0783960 | MtrunA17_Chr3g0126801 | 70.297 | 101 | 30 | 0 | 101 | 201 | 6 | 106 | 9.36e-47 | 150 |
| Msa0783960 | MtrunA17_Chr4g0063121 | 40.437 | 183 | 89 | 1 | 19 | 201 | 7 | 169 | 1.71e-43 | 144 |
| Msa0783960 | MtrunA17_Chr3g0126811 | 61.364 | 88 | 34 | 0 | 17 | 104 | 29 | 116 | 1.30e-31 | 111 |
| Msa0783960 | MtrunA17_Chr8g0388311 | 52.439 | 82 | 39 | 0 | 121 | 202 | 1 | 82 | 3.40e-25 | 94.0 |
| Msa0783960 | MtrunA17_Chr5g0399921 | 45.556 | 90 | 49 | 0 | 15 | 104 | 25 | 114 | 2.98e-23 | 89.7 |
| Msa0783960 | MtrunA17_Chr8g0388321 | 39.091 | 110 | 42 | 2 | 18 | 118 | 71 | 164 | 1.62e-19 | 81.6 |
| Msa0783960 | MtrunA17_Chr5g0399931 | 55.738 | 61 | 27 | 0 | 121 | 181 | 1 | 61 | 1.54e-16 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783960 | AT5G24270.5 | 64.674 | 184 | 65 | 0 | 16 | 199 | 6 | 189 | 3.17e-87 | 255 |
| Msa0783960 | AT5G24270.4 | 62.245 | 196 | 71 | 1 | 7 | 199 | 19 | 214 | 3.54e-86 | 254 |
| Msa0783960 | AT5G24270.1 | 62.245 | 196 | 71 | 1 | 7 | 199 | 19 | 214 | 3.54e-86 | 254 |
| Msa0783960 | AT5G24270.2 | 62.245 | 196 | 71 | 1 | 7 | 199 | 19 | 214 | 3.54e-86 | 254 |
| Msa0783960 | AT5G24270.3 | 63.975 | 161 | 58 | 0 | 39 | 199 | 7 | 167 | 2.78e-76 | 227 |
| Msa0783960 | AT1G64480.2 | 58.470 | 183 | 76 | 0 | 17 | 199 | 32 | 214 | 6.75e-72 | 217 |
| Msa0783960 | AT1G64480.3 | 58.470 | 183 | 76 | 0 | 17 | 199 | 32 | 214 | 6.75e-72 | 217 |
| Msa0783960 | AT1G64480.1 | 58.470 | 183 | 76 | 0 | 17 | 199 | 32 | 214 | 6.75e-72 | 217 |
| Msa0783960 | AT4G33000.2 | 57.923 | 183 | 77 | 0 | 17 | 199 | 64 | 246 | 3.97e-71 | 216 |
| Msa0783960 | AT4G17615.4 | 54.054 | 185 | 85 | 0 | 15 | 199 | 26 | 210 | 4.37e-71 | 215 |
| Msa0783960 | AT4G17615.1 | 54.054 | 185 | 85 | 0 | 15 | 199 | 26 | 210 | 4.37e-71 | 215 |
| Msa0783960 | AT4G17615.5 | 54.054 | 185 | 85 | 0 | 15 | 199 | 26 | 210 | 4.37e-71 | 215 |
| Msa0783960 | AT5G47100.1 | 54.595 | 185 | 84 | 0 | 15 | 199 | 26 | 210 | 5.43e-71 | 215 |
| Msa0783960 | AT4G33000.1 | 57.923 | 183 | 77 | 0 | 17 | 199 | 74 | 256 | 7.79e-71 | 216 |
| Msa0783960 | AT4G26570.1 | 53.804 | 184 | 85 | 0 | 17 | 200 | 43 | 226 | 8.42e-71 | 215 |
| Msa0783960 | AT5G55990.1 | 54.348 | 184 | 84 | 0 | 17 | 200 | 43 | 226 | 1.01e-69 | 212 |
| Msa0783960 | AT5G55990.2 | 54.348 | 184 | 84 | 0 | 17 | 200 | 43 | 226 | 1.01e-69 | 212 |
| Msa0783960 | AT4G26570.2 | 52.660 | 188 | 85 | 1 | 17 | 200 | 43 | 230 | 1.34e-68 | 209 |
| Msa0783960 | AT1G64480.4 | 58.788 | 165 | 68 | 0 | 17 | 181 | 32 | 196 | 9.92e-64 | 196 |
| Msa0783960 | AT4G17615.3 | 54.386 | 171 | 78 | 0 | 15 | 185 | 26 | 196 | 1.79e-63 | 197 |
| Msa0783960 | AT4G17615.2 | 54.777 | 157 | 71 | 0 | 43 | 199 | 12 | 168 | 1.67e-61 | 189 |
| Msa0783960 | AT4G16350.2 | 52.841 | 176 | 79 | 1 | 17 | 192 | 41 | 212 | 1.41e-59 | 186 |
| Msa0783960 | AT4G16350.1 | 52.841 | 176 | 79 | 1 | 17 | 192 | 41 | 212 | 1.41e-59 | 186 |
| Msa0783960 | AT4G01420.1 | 49.133 | 173 | 88 | 0 | 20 | 192 | 30 | 202 | 3.74e-57 | 179 |
| Msa0783960 | AT4G26560.1 | 43.396 | 212 | 99 | 2 | 2 | 200 | 11 | 214 | 5.14e-57 | 179 |
| Msa0783960 | AT4G01420.2 | 49.383 | 162 | 82 | 0 | 20 | 181 | 30 | 191 | 2.78e-53 | 169 |
| Msa0783960 | AT5G47100.2 | 51.128 | 133 | 65 | 0 | 15 | 147 | 26 | 158 | 9.40e-46 | 149 |
| Msa0783960 | AT4G33000.5 | 55.639 | 133 | 59 | 0 | 17 | 149 | 64 | 196 | 1.65e-44 | 147 |
| Msa0783960 | AT4G33000.4 | 56.589 | 129 | 56 | 0 | 17 | 145 | 64 | 192 | 2.53e-44 | 146 |
| Msa0783960 | AT4G33000.6 | 56.589 | 129 | 56 | 0 | 17 | 145 | 64 | 192 | 2.53e-44 | 146 |
| Msa0783960 | AT4G33000.3 | 55.556 | 81 | 36 | 0 | 17 | 97 | 64 | 144 | 6.69e-22 | 87.8 |
Find 56 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTCACGCATTTAGTAATT+TGG | 0.163718 | 5_2:+68273372 | None:intergenic |
| TTGTCTGCTTGAGGAGCTTT+AGG | 0.234896 | 5_2:+68274581 | None:intergenic |
| CATTATATTAGACGCCTTAA+TGG | 0.237392 | 5_2:+68273210 | None:intergenic |
| GGATATGGTGTTGATGATTT+TGG | 0.239699 | 5_2:-68274227 | Msa0783960:CDS |
| AGTGGAAAGGAACCAATTTC+AGG | 0.259449 | 5_2:+68275158 | None:intergenic |
| TTCTAATAAGCATTGATATA+TGG | 0.263606 | 5_2:+68273723 | None:intergenic |
| TTATCCAAACAACCTGAAAT+TGG | 0.264477 | 5_2:-68275170 | Msa0783960:five_prime_UTR |
| GGAACCAATTTCAGGTTGTT+TGG | 0.303557 | 5_2:+68275166 | None:intergenic |
| TTCTGCGCTCAGCATAAAAC+TGG | 0.328781 | 5_2:+68273838 | None:intergenic |
| TAAATTCGCCAAACTCTATA+TGG | 0.330475 | 5_2:+68274627 | None:intergenic |
| GGCGAATTTATCAGATCTTT+AGG | 0.334304 | 5_2:-68274614 | Msa0783960:CDS |
| AAATTTACAGTTGAAGGATA+TGG | 0.376424 | 5_2:-68274242 | Msa0783960:intron |
| TAACTGAATTCTGACCATTA+AGG | 0.382199 | 5_2:-68273224 | Msa0783960:three_prime_UTR |
| CACAACGGCCATATAGAGTT+TGG | 0.395021 | 5_2:-68274635 | Msa0783960:CDS |
| CATTCATGTAGTTTGTCGTT+TGG | 0.395666 | 5_2:-68273467 | Msa0783960:three_prime_UTR |
| AAACTACGATTGTGATTCTT+CGG | 0.429750 | 5_2:+68273814 | None:intergenic |
| GTACACTATTCATATGCAAT+TGG | 0.434840 | 5_2:+68275114 | None:intergenic |
| GTCATGTTCTTGAGTAATGA+TGG | 0.435791 | 5_2:+68273983 | None:intergenic |
| AAACAAACGCAACCTCTTTG+TGG | 0.437485 | 5_2:-68274804 | Msa0783960:CDS |
| TTATATGACTTGAGGCATAC+AGG | 0.464058 | 5_2:-68274364 | Msa0783960:CDS |
| TTTAAAACTTACATTAGATA+AGG | 0.469690 | 5_2:+68273956 | None:intergenic |
| AGCAGCAGATGAAGAATTTG+TGG | 0.474533 | 5_2:-68273168 | Msa0783960:three_prime_UTR |
| GATATATGGTTATCAAAGGT+TGG | 0.474970 | 5_2:+68273737 | None:intergenic |
| ATAATCACTTCTGCTACAAT+CGG | 0.481128 | 5_2:-68275205 | Msa0783960:five_prime_UTR |
| GAAGAATGGAGTGAATATGT+TGG | 0.482908 | 5_2:-68274013 | Msa0783960:CDS |
| AGTTTGTCGTTTGGAGCCGT+TGG | 0.490956 | 5_2:-68273458 | Msa0783960:three_prime_UTR |
| GGGACTTAGTTAACAGACTC+TGG | 0.494451 | 5_2:-68273147 | None:intergenic |
| GAGAGAGGTGGAAATCTTGA+AGG | 0.495718 | 5_2:-68275051 | Msa0783960:CDS |
| TTGGAGCTGTTAGATGAAGA+TGG | 0.504661 | 5_2:+68273391 | None:intergenic |
| CGACAAACTACATGAATGCT+AGG | 0.516597 | 5_2:+68273472 | None:intergenic |
| AAGTGATTATAACACATTTG+AGG | 0.519985 | 5_2:+68273282 | None:intergenic |
| CAAATGCAATGCATATAGAA+TGG | 0.521321 | 5_2:-68273775 | Msa0783960:three_prime_UTR |
| ACGCAACCTCTTTGTGGATA+GGG | 0.528181 | 5_2:-68274798 | Msa0783960:intron |
| TAACATGATCTTTCGTGATG+TGG | 0.536071 | 5_2:-68273257 | Msa0783960:three_prime_UTR |
| TGCAATGCATATAGAATGGT+CGG | 0.548590 | 5_2:-68273771 | Msa0783960:three_prime_UTR |
| GCAGCAGATGAAGAATTTGT+GGG | 0.552817 | 5_2:-68273167 | Msa0783960:three_prime_UTR |
| CGTTTAGATTATATGACTTG+AGG | 0.559102 | 5_2:-68274372 | Msa0783960:CDS |
| CTTCATCTGCTGCTGATACA+CGG | 0.560602 | 5_2:+68273177 | None:intergenic |
| TTTGGTTCTATCTGATGATG+TGG | 0.562282 | 5_2:-68274194 | Msa0783960:CDS |
| AACGCAACCTCTTTGTGGAT+AGG | 0.564160 | 5_2:-68274799 | Msa0783960:CDS |
| CATTGATATATGGTTATCAA+AGG | 0.564986 | 5_2:+68273733 | None:intergenic |
| TATGAGACTCATTGTGTAAG+CGG | 0.570664 | 5_2:+68273345 | None:intergenic |
| CATAAATTAAAACACACAAG+TGG | 0.587867 | 5_2:+68275140 | None:intergenic |
| ATTAAAACACACAAGTGGAA+AGG | 0.598568 | 5_2:+68275145 | None:intergenic |
| CCTAGCAGTTACTGTGAGAG+AGG | 0.600150 | 5_2:-68275066 | Msa0783960:CDS |
| ATAACAAAAGCATATTCAGA+AGG | 0.604134 | 5_2:+68273305 | None:intergenic |
| ACTGTAAGGTCTTGATCCAA+CGG | 0.605756 | 5_2:+68273442 | None:intergenic |
| CCTCTCTCACAGTAACTGCT+AGG | 0.611386 | 5_2:+68275066 | None:intergenic |
| GGTTGAAACAATTGTGGACA+AGG | 0.615162 | 5_2:-68274173 | Msa0783960:intron |
| GAAACAGACACGAAAGGTGA+CGG | 0.615254 | 5_2:-68274049 | Msa0783960:CDS |
| TGCATACCCTATCCACAAAG+AGG | 0.624228 | 5_2:+68274792 | None:intergenic |
| TGATGTGGTTGAAACAATTG+TGG | 0.635953 | 5_2:-68274179 | Msa0783960:CDS |
| AGCAGTTACTGTGAGAGAGG+TGG | 0.654761 | 5_2:-68275063 | Msa0783960:CDS |
| TCTGCGCTCAGCATAAAACT+GGG | 0.668163 | 5_2:+68273839 | None:intergenic |
| TTTCTAGAAACAGACACGAA+AGG | 0.669410 | 5_2:-68274055 | Msa0783960:CDS |
| AGGTTACATTGAGCGCGAAG+AGG | 0.670430 | 5_2:-68274344 | Msa0783960:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTCTTATATATATATTT+TGG | - | chr5_2:68274294-68274313 | Msa0783960:intron | 10.0% |
| !!! | GTTTCTTATATATATATTTT+GGG | - | chr5_2:68274295-68274314 | Msa0783960:intron | 10.0% |
| !!! | TTTCTTATATATATATTTTG+GGG | - | chr5_2:68274296-68274315 | Msa0783960:intron | 10.0% |
| !!! | AGTTTCTTATATATATATTT+TGG | - | chr5_2:68274294-68274313 | Msa0783960:intron | 10.0% |
| !!! | GTTTCTTATATATATATTTT+GGG | - | chr5_2:68274295-68274314 | Msa0783960:intron | 10.0% |
| !!! | TTTCTTATATATATATTTTG+GGG | - | chr5_2:68274296-68274315 | Msa0783960:intron | 10.0% |
| !!! | TTCTTATATATATATTTTGG+GGG | - | chr5_2:68274297-68274316 | Msa0783960:intron | 15.0% |
| !!! | TTTAAAACTTACATTAGATA+AGG | + | chr5_2:68274435-68274454 | None:intergenic | 15.0% |
| !!! | TTCTTATATATATATTTTGG+GGG | - | chr5_2:68274297-68274316 | Msa0783960:intron | 15.0% |
| !!! | TTTAAAACTTACATTAGATA+AGG | + | chr5_2:68274435-68274454 | None:intergenic | 15.0% |
| !!! | TGACAATTGTTTTAATGTTT+TGG | - | chr5_2:68274114-68274133 | Msa0783960:intron | 20.0% |
| !! | TAATGAAAATTTACAGTTGA+AGG | - | chr5_2:68274140-68274159 | Msa0783960:intron | 20.0% |
| !!! | TCTTATATATATATTTTGGG+GGG | - | chr5_2:68274298-68274317 | Msa0783960:intron | 20.0% |
| !!! | ACTTTTTGATTCTAATTTCA+GGG | - | chr5_2:68274509-68274528 | Msa0783960:intron | 20.0% |
| !!! | TTCTAATAAGCATTGATATA+TGG | + | chr5_2:68274668-68274687 | None:intergenic | 20.0% |
| !! | TATCAATGCTTATTAGAAAT+TGG | - | chr5_2:68274670-68274689 | Msa0783960:intron | 20.0% |
| !!! | TGACAATTGTTTTAATGTTT+TGG | - | chr5_2:68274114-68274133 | Msa0783960:intron | 20.0% |
| !! | TAATGAAAATTTACAGTTGA+AGG | - | chr5_2:68274140-68274159 | Msa0783960:intron | 20.0% |
| !!! | TCTTATATATATATTTTGGG+GGG | - | chr5_2:68274298-68274317 | Msa0783960:intron | 20.0% |
| !!! | ACTTTTTGATTCTAATTTCA+GGG | - | chr5_2:68274509-68274528 | Msa0783960:intron | 20.0% |
| !!! | TTCTAATAAGCATTGATATA+TGG | + | chr5_2:68274668-68274687 | None:intergenic | 20.0% |
| !! | TATCAATGCTTATTAGAAAT+TGG | - | chr5_2:68274670-68274689 | Msa0783960:intron | 20.0% |
| ! | CATAAATTAAAACACACAAG+TGG | + | chr5_2:68273251-68273270 | None:intergenic | 25.0% |
| !! | GAAAAATGGACTTATTCAAA+AGG | - | chr5_2:68273391-68273410 | Msa0783960:three_prime_UTR | 25.0% |
| ! | TGTGTATTGTGTATATTAAC+AGG | - | chr5_2:68273530-68273549 | Msa0783960:intron | 25.0% |
| ! | AAATTTACAGTTGAAGGATA+TGG | - | chr5_2:68274146-68274165 | Msa0783960:intron | 25.0% |
| !! | GAAAAATTGACTTAGAAGAA+TGG | - | chr5_2:68274361-68274380 | Msa0783960:CDS | 25.0% |
| !!! | CACTTTTTGATTCTAATTTC+AGG | - | chr5_2:68274508-68274527 | Msa0783960:intron | 25.0% |
| ! | CATTGATATATGGTTATCAA+AGG | + | chr5_2:68274658-68274677 | None:intergenic | 25.0% |
| ! | AAGAAATTCAGAAACAACAA+CGG | + | chr5_2:68274753-68274772 | None:intergenic | 25.0% |
| ! | TAAGAAATAGTGAAAATGCA+TGG | - | chr5_2:68274839-68274858 | Msa0783960:CDS | 25.0% |
| ! | ATTTCACGCATTTAGTAATT+TGG | + | chr5_2:68275019-68275038 | None:intergenic | 25.0% |
| !! | ATAACAAAAGCATATTCAGA+AGG | + | chr5_2:68275086-68275105 | None:intergenic | 25.0% |
| ! | AAGTGATTATAACACATTTG+AGG | + | chr5_2:68275109-68275128 | None:intergenic | 25.0% |
| ! | CATAAATTAAAACACACAAG+TGG | + | chr5_2:68273251-68273270 | None:intergenic | 25.0% |
| !! | GAAAAATGGACTTATTCAAA+AGG | - | chr5_2:68273391-68273410 | Msa0783960:three_prime_UTR | 25.0% |
| ! | TGTGTATTGTGTATATTAAC+AGG | - | chr5_2:68273530-68273549 | Msa0783960:intron | 25.0% |
| ! | AAATTTACAGTTGAAGGATA+TGG | - | chr5_2:68274146-68274165 | Msa0783960:intron | 25.0% |
| !! | GAAAAATTGACTTAGAAGAA+TGG | - | chr5_2:68274361-68274380 | Msa0783960:CDS | 25.0% |
| !!! | CACTTTTTGATTCTAATTTC+AGG | - | chr5_2:68274508-68274527 | Msa0783960:intron | 25.0% |
| ! | CATTGATATATGGTTATCAA+AGG | + | chr5_2:68274658-68274677 | None:intergenic | 25.0% |
| ! | AAGAAATTCAGAAACAACAA+CGG | + | chr5_2:68274753-68274772 | None:intergenic | 25.0% |
| ! | TAAGAAATAGTGAAAATGCA+TGG | - | chr5_2:68274839-68274858 | Msa0783960:CDS | 25.0% |
| ! | ATTTCACGCATTTAGTAATT+TGG | + | chr5_2:68275019-68275038 | None:intergenic | 25.0% |
| !! | ATAACAAAAGCATATTCAGA+AGG | + | chr5_2:68275086-68275105 | None:intergenic | 25.0% |
| ! | AAGTGATTATAACACATTTG+AGG | + | chr5_2:68275109-68275128 | None:intergenic | 25.0% |
| ATAATCACTTCTGCTACAAT+CGG | - | chr5_2:68273183-68273202 | Msa0783960:three_prime_UTR | 30.0% | |
| TTATCCAAACAACCTGAAAT+TGG | - | chr5_2:68273218-68273237 | Msa0783960:three_prime_UTR | 30.0% | |
| ATTAAAACACACAAGTGGAA+AGG | + | chr5_2:68273246-68273265 | None:intergenic | 30.0% | |
| GTACACTATTCATATGCAAT+TGG | + | chr5_2:68273277-68273296 | None:intergenic | 30.0% | |
| TGCACAGTTATTGTGAAAAA+TGG | - | chr5_2:68273377-68273396 | Msa0783960:three_prime_UTR | 30.0% | |
| TAAATTCGCCAAACTCTATA+TGG | + | chr5_2:68273764-68273783 | None:intergenic | 30.0% | |
| !!! | CATTTTATTTTGTCTGCTTG+AGG | + | chr5_2:68273819-68273838 | None:intergenic | 30.0% |
| ! | CTGCGAAGAATAATTTTACA+TGG | + | chr5_2:68273993-68274012 | None:intergenic | 30.0% |
| CGTTTAGATTATATGACTTG+AGG | - | chr5_2:68274016-68274035 | Msa0783960:CDS | 30.0% | |
| TCTATCCTATGAAAAGACTA+CGG | + | chr5_2:68274079-68274098 | None:intergenic | 30.0% | |
| ! | AGTCTTTTCATAGGATAGAT+TGG | - | chr5_2:68274080-68274099 | Msa0783960:intron | 30.0% |
| !!! | GATTTTGGTTGAATCTGATT+TGG | - | chr5_2:68274176-68274195 | Msa0783960:CDS | 30.0% |
| AAACTACGATTGTGATTCTT+CGG | + | chr5_2:68274577-68274596 | None:intergenic | 30.0% | |
| CAAATGCAATGCATATAGAA+TGG | - | chr5_2:68274613-68274632 | Msa0783960:CDS | 30.0% | |
| GATATATGGTTATCAAAGGT+TGG | + | chr5_2:68274654-68274673 | None:intergenic | 30.0% | |
| TAGTGAAAATTGTGAATTGC+AGG | + | chr5_2:68274821-68274840 | None:intergenic | 30.0% | |
| AAATAGTGAAAATGCATGGA+GGG | - | chr5_2:68274843-68274862 | Msa0783960:intron | 30.0% | |
| TAACTGAATTCTGACCATTA+AGG | - | chr5_2:68275164-68275183 | Msa0783960:five_prime_UTR | 30.0% | |
| CATTATATTAGACGCCTTAA+TGG | + | chr5_2:68275181-68275200 | None:intergenic | 30.0% | |
| ATAATCACTTCTGCTACAAT+CGG | - | chr5_2:68273183-68273202 | Msa0783960:three_prime_UTR | 30.0% | |
| TTATCCAAACAACCTGAAAT+TGG | - | chr5_2:68273218-68273237 | Msa0783960:three_prime_UTR | 30.0% | |
| ATTAAAACACACAAGTGGAA+AGG | + | chr5_2:68273246-68273265 | None:intergenic | 30.0% | |
| GTACACTATTCATATGCAAT+TGG | + | chr5_2:68273277-68273296 | None:intergenic | 30.0% | |
| TGCACAGTTATTGTGAAAAA+TGG | - | chr5_2:68273377-68273396 | Msa0783960:three_prime_UTR | 30.0% | |
| TAAATTCGCCAAACTCTATA+TGG | + | chr5_2:68273764-68273783 | None:intergenic | 30.0% | |
| !!! | CATTTTATTTTGTCTGCTTG+AGG | + | chr5_2:68273819-68273838 | None:intergenic | 30.0% |
| ! | CTGCGAAGAATAATTTTACA+TGG | + | chr5_2:68273993-68274012 | None:intergenic | 30.0% |
| CGTTTAGATTATATGACTTG+AGG | - | chr5_2:68274016-68274035 | Msa0783960:CDS | 30.0% | |
| TCTATCCTATGAAAAGACTA+CGG | + | chr5_2:68274079-68274098 | None:intergenic | 30.0% | |
| ! | AGTCTTTTCATAGGATAGAT+TGG | - | chr5_2:68274080-68274099 | Msa0783960:intron | 30.0% |
| !!! | GATTTTGGTTGAATCTGATT+TGG | - | chr5_2:68274176-68274195 | Msa0783960:CDS | 30.0% |
| AAACTACGATTGTGATTCTT+CGG | + | chr5_2:68274577-68274596 | None:intergenic | 30.0% | |
| CAAATGCAATGCATATAGAA+TGG | - | chr5_2:68274613-68274632 | Msa0783960:CDS | 30.0% | |
| GATATATGGTTATCAAAGGT+TGG | + | chr5_2:68274654-68274673 | None:intergenic | 30.0% | |
| TAGTGAAAATTGTGAATTGC+AGG | + | chr5_2:68274821-68274840 | None:intergenic | 30.0% | |
| AAATAGTGAAAATGCATGGA+GGG | - | chr5_2:68274843-68274862 | Msa0783960:intron | 30.0% | |
| TAACTGAATTCTGACCATTA+AGG | - | chr5_2:68275164-68275183 | Msa0783960:five_prime_UTR | 30.0% | |
| CATTATATTAGACGCCTTAA+TGG | + | chr5_2:68275181-68275200 | None:intergenic | 30.0% | |
| ACTTGAATCTCTTGTTCGAT+TGG | - | chr5_2:68273445-68273464 | Msa0783960:three_prime_UTR | 35.0% | |
| GAAAAGATCAAACATCTGCA+TGG | + | chr5_2:68273724-68273743 | None:intergenic | 35.0% | |
| ! | CTTTTCGATGTCAATCACAA+CGG | - | chr5_2:68273738-68273757 | Msa0783960:three_prime_UTR | 35.0% |
| GGCGAATTTATCAGATCTTT+AGG | - | chr5_2:68273774-68273793 | Msa0783960:three_prime_UTR | 35.0% | |
| TGTATATACGATCAACATCC+TGG | + | chr5_2:68273893-68273912 | None:intergenic | 35.0% | |
| TTATATGACTTGAGGCATAC+AGG | - | chr5_2:68274024-68274043 | Msa0783960:CDS | 35.0% | |
| CTATCCTATGAAAAGACTAC+GGG | + | chr5_2:68274078-68274097 | None:intergenic | 35.0% | |
| !!! | GGATATGGTGTTGATGATTT+TGG | - | chr5_2:68274161-68274180 | Msa0783960:intron | 35.0% |
| !! | TTTGGTTCTATCTGATGATG+TGG | - | chr5_2:68274194-68274213 | Msa0783960:CDS | 35.0% |
| TGATGTGGTTGAAACAATTG+TGG | - | chr5_2:68274209-68274228 | Msa0783960:CDS | 35.0% | |
| ! | TTTCTAGAAACAGACACGAA+AGG | - | chr5_2:68274333-68274352 | Msa0783960:intron | 35.0% |
| GAAGAATGGAGTGAATATGT+TGG | - | chr5_2:68274375-68274394 | Msa0783960:CDS | 35.0% | |
| GTCATGTTCTTGAGTAATGA+TGG | + | chr5_2:68274408-68274427 | None:intergenic | 35.0% | |
| CTGTGTCATAATGCAATGAA+TGG | + | chr5_2:68274476-68274495 | None:intergenic | 35.0% | |
| TGCAATGCATATAGAATGGT+CGG | - | chr5_2:68274617-68274636 | Msa0783960:CDS | 35.0% | |
| AGACCATAGTACACTTTCTA+TGG | - | chr5_2:68274717-68274736 | Msa0783960:intron | 35.0% | |
| GACCATAGTACACTTTCTAT+GGG | - | chr5_2:68274718-68274737 | Msa0783960:intron | 35.0% | |
| ACCATAGTACACTTTCTATG+GGG | - | chr5_2:68274719-68274738 | Msa0783960:intron | 35.0% | |
| GTTTCTGAATTTCTTATCCG+AGG | - | chr5_2:68274758-68274777 | Msa0783960:intron | 35.0% | |
| AAACCTTGCAATAAACACCT+CGG | + | chr5_2:68274778-68274797 | None:intergenic | 35.0% | |
| ! | AGGCTTTTCTAATTGCTCTA+AGG | + | chr5_2:68274801-68274820 | None:intergenic | 35.0% |
| GAAATAGTGAAAATGCATGG+AGG | - | chr5_2:68274842-68274861 | Msa0783960:intron | 35.0% | |
| ! | CATTCATGTAGTTTGTCGTT+TGG | - | chr5_2:68274921-68274940 | Msa0783960:intron | 35.0% |
| TAAGCTCGTCAAAAACTGTA+AGG | + | chr5_2:68274963-68274982 | None:intergenic | 35.0% | |
| TATGAGACTCATTGTGTAAG+CGG | + | chr5_2:68275046-68275065 | None:intergenic | 35.0% | |
| TAACATGATCTTTCGTGATG+TGG | - | chr5_2:68275131-68275150 | Msa0783960:five_prime_UTR | 35.0% | |
| ACTTGAATCTCTTGTTCGAT+TGG | - | chr5_2:68273445-68273464 | Msa0783960:three_prime_UTR | 35.0% | |
| GAAAAGATCAAACATCTGCA+TGG | + | chr5_2:68273724-68273743 | None:intergenic | 35.0% | |
| ! | CTTTTCGATGTCAATCACAA+CGG | - | chr5_2:68273738-68273757 | Msa0783960:three_prime_UTR | 35.0% |
| GGCGAATTTATCAGATCTTT+AGG | - | chr5_2:68273774-68273793 | Msa0783960:three_prime_UTR | 35.0% | |
| TGTATATACGATCAACATCC+TGG | + | chr5_2:68273893-68273912 | None:intergenic | 35.0% | |
| TTATATGACTTGAGGCATAC+AGG | - | chr5_2:68274024-68274043 | Msa0783960:CDS | 35.0% | |
| CTATCCTATGAAAAGACTAC+GGG | + | chr5_2:68274078-68274097 | None:intergenic | 35.0% | |
| !!! | GGATATGGTGTTGATGATTT+TGG | - | chr5_2:68274161-68274180 | Msa0783960:intron | 35.0% |
| !! | TTTGGTTCTATCTGATGATG+TGG | - | chr5_2:68274194-68274213 | Msa0783960:CDS | 35.0% |
| TGATGTGGTTGAAACAATTG+TGG | - | chr5_2:68274209-68274228 | Msa0783960:CDS | 35.0% | |
| ! | TTTCTAGAAACAGACACGAA+AGG | - | chr5_2:68274333-68274352 | Msa0783960:intron | 35.0% |
| GAAGAATGGAGTGAATATGT+TGG | - | chr5_2:68274375-68274394 | Msa0783960:CDS | 35.0% | |
| GTCATGTTCTTGAGTAATGA+TGG | + | chr5_2:68274408-68274427 | None:intergenic | 35.0% | |
| CTGTGTCATAATGCAATGAA+TGG | + | chr5_2:68274476-68274495 | None:intergenic | 35.0% | |
| TGCAATGCATATAGAATGGT+CGG | - | chr5_2:68274617-68274636 | Msa0783960:CDS | 35.0% | |
| AGACCATAGTACACTTTCTA+TGG | - | chr5_2:68274717-68274736 | Msa0783960:intron | 35.0% | |
| GACCATAGTACACTTTCTAT+GGG | - | chr5_2:68274718-68274737 | Msa0783960:intron | 35.0% | |
| ACCATAGTACACTTTCTATG+GGG | - | chr5_2:68274719-68274738 | Msa0783960:intron | 35.0% | |
| GTTTCTGAATTTCTTATCCG+AGG | - | chr5_2:68274758-68274777 | Msa0783960:intron | 35.0% | |
| AAACCTTGCAATAAACACCT+CGG | + | chr5_2:68274778-68274797 | None:intergenic | 35.0% | |
| ! | AGGCTTTTCTAATTGCTCTA+AGG | + | chr5_2:68274801-68274820 | None:intergenic | 35.0% |
| GAAATAGTGAAAATGCATGG+AGG | - | chr5_2:68274842-68274861 | Msa0783960:intron | 35.0% | |
| ! | CATTCATGTAGTTTGTCGTT+TGG | - | chr5_2:68274921-68274940 | Msa0783960:intron | 35.0% |
| TAAGCTCGTCAAAAACTGTA+AGG | + | chr5_2:68274963-68274982 | None:intergenic | 35.0% | |
| TATGAGACTCATTGTGTAAG+CGG | + | chr5_2:68275046-68275065 | None:intergenic | 35.0% | |
| TAACATGATCTTTCGTGATG+TGG | - | chr5_2:68275131-68275150 | Msa0783960:five_prime_UTR | 35.0% | |
| !! | GGAACCAATTTCAGGTTGTT+TGG | + | chr5_2:68273225-68273244 | None:intergenic | 40.0% |
| AGTGGAAAGGAACCAATTTC+AGG | + | chr5_2:68273233-68273252 | None:intergenic | 40.0% | |
| AAACAAACGCAACCTCTTTG+TGG | - | chr5_2:68273584-68273603 | Msa0783960:intron | 40.0% | |
| AGTCGTTTGTTTACCATTCC+AGG | - | chr5_2:68273872-68273891 | Msa0783960:intron | 40.0% | |
| ATACGATCAACATCCTGGAA+TGG | + | chr5_2:68273888-68273907 | None:intergenic | 40.0% | |
| ! | TACTCCCGTAGTCTTTTCAT+AGG | - | chr5_2:68274071-68274090 | Msa0783960:intron | 40.0% |
| GGTTGAAACAATTGTGGACA+AGG | - | chr5_2:68274215-68274234 | Msa0783960:CDS | 40.0% | |
| ! | TCCCCATAGAAAGTGTACTA+TGG | + | chr5_2:68274723-68274742 | None:intergenic | 40.0% |
| ACACTTTCTATGGGGAAGTT+TGG | - | chr5_2:68274727-68274746 | Msa0783960:intron | 40.0% | |
| ! | TATCCGAGGTGTTTATTGCA+AGG | - | chr5_2:68274772-68274791 | Msa0783960:intron | 40.0% |
| TGAATGCTAGGAATGTGAGA+TGG | + | chr5_2:68274907-68274926 | None:intergenic | 40.0% | |
| CGACAAACTACATGAATGCT+AGG | + | chr5_2:68274919-68274938 | None:intergenic | 40.0% | |
| ACTGTAAGGTCTTGATCCAA+CGG | + | chr5_2:68274949-68274968 | None:intergenic | 40.0% | |
| TTGGAGCTGTTAGATGAAGA+TGG | + | chr5_2:68275000-68275019 | None:intergenic | 40.0% | |
| AGCAGCAGATGAAGAATTTG+TGG | - | chr5_2:68275220-68275239 | Msa0783960:five_prime_UTR | 40.0% | |
| GCAGCAGATGAAGAATTTGT+GGG | - | chr5_2:68275221-68275240 | Msa0783960:five_prime_UTR | 40.0% | |
| !! | GGAACCAATTTCAGGTTGTT+TGG | + | chr5_2:68273225-68273244 | None:intergenic | 40.0% |
| AGTGGAAAGGAACCAATTTC+AGG | + | chr5_2:68273233-68273252 | None:intergenic | 40.0% | |
| AAACAAACGCAACCTCTTTG+TGG | - | chr5_2:68273584-68273603 | Msa0783960:intron | 40.0% | |
| AGTCGTTTGTTTACCATTCC+AGG | - | chr5_2:68273872-68273891 | Msa0783960:intron | 40.0% | |
| ATACGATCAACATCCTGGAA+TGG | + | chr5_2:68273888-68273907 | None:intergenic | 40.0% | |
| ! | TACTCCCGTAGTCTTTTCAT+AGG | - | chr5_2:68274071-68274090 | Msa0783960:intron | 40.0% |
| GGTTGAAACAATTGTGGACA+AGG | - | chr5_2:68274215-68274234 | Msa0783960:CDS | 40.0% | |
| ! | TCCCCATAGAAAGTGTACTA+TGG | + | chr5_2:68274723-68274742 | None:intergenic | 40.0% |
| ACACTTTCTATGGGGAAGTT+TGG | - | chr5_2:68274727-68274746 | Msa0783960:intron | 40.0% | |
| ! | TATCCGAGGTGTTTATTGCA+AGG | - | chr5_2:68274772-68274791 | Msa0783960:intron | 40.0% |
| TGAATGCTAGGAATGTGAGA+TGG | + | chr5_2:68274907-68274926 | None:intergenic | 40.0% | |
| CGACAAACTACATGAATGCT+AGG | + | chr5_2:68274919-68274938 | None:intergenic | 40.0% | |
| ACTGTAAGGTCTTGATCCAA+CGG | + | chr5_2:68274949-68274968 | None:intergenic | 40.0% | |
| TTGGAGCTGTTAGATGAAGA+TGG | + | chr5_2:68275000-68275019 | None:intergenic | 40.0% | |
| AGCAGCAGATGAAGAATTTG+TGG | - | chr5_2:68275220-68275239 | Msa0783960:five_prime_UTR | 40.0% | |
| GCAGCAGATGAAGAATTTGT+GGG | - | chr5_2:68275221-68275240 | Msa0783960:five_prime_UTR | 40.0% | |
| GAGAGAGGTGGAAATCTTGA+AGG | - | chr5_2:68273337-68273356 | Msa0783960:three_prime_UTR | 45.0% | |
| AACGCAACCTCTTTGTGGAT+AGG | - | chr5_2:68273589-68273608 | Msa0783960:intron | 45.0% | |
| ACGCAACCTCTTTGTGGATA+GGG | - | chr5_2:68273590-68273609 | Msa0783960:intron | 45.0% | |
| TGCATACCCTATCCACAAAG+AGG | + | chr5_2:68273599-68273618 | None:intergenic | 45.0% | |
| CACAACGGCCATATAGAGTT+TGG | - | chr5_2:68273753-68273772 | Msa0783960:three_prime_UTR | 45.0% | |
| TTGTCTGCTTGAGGAGCTTT+AGG | + | chr5_2:68273810-68273829 | None:intergenic | 45.0% | |
| GAAACAGACACGAAAGGTGA+CGG | - | chr5_2:68274339-68274358 | Msa0783960:intron | 45.0% | |
| TCTGCGCTCAGCATAAAACT+GGG | + | chr5_2:68274552-68274571 | None:intergenic | 45.0% | |
| TTCTGCGCTCAGCATAAAAC+TGG | + | chr5_2:68274553-68274572 | None:intergenic | 45.0% | |
| ! | TTTGACCAGGCAGCAGATTT+TGG | - | chr5_2:68274873-68274892 | Msa0783960:intron | 45.0% |
| TGAATCCAAAATCTGCTGCC+TGG | + | chr5_2:68274881-68274900 | None:intergenic | 45.0% | |
| CTTCATCTGCTGCTGATACA+CGG | + | chr5_2:68275214-68275233 | None:intergenic | 45.0% | |
| GAGAGAGGTGGAAATCTTGA+AGG | - | chr5_2:68273337-68273356 | Msa0783960:three_prime_UTR | 45.0% | |
| AACGCAACCTCTTTGTGGAT+AGG | - | chr5_2:68273589-68273608 | Msa0783960:intron | 45.0% | |
| ACGCAACCTCTTTGTGGATA+GGG | - | chr5_2:68273590-68273609 | Msa0783960:intron | 45.0% | |
| TGCATACCCTATCCACAAAG+AGG | + | chr5_2:68273599-68273618 | None:intergenic | 45.0% | |
| CACAACGGCCATATAGAGTT+TGG | - | chr5_2:68273753-68273772 | Msa0783960:three_prime_UTR | 45.0% | |
| TTGTCTGCTTGAGGAGCTTT+AGG | + | chr5_2:68273810-68273829 | None:intergenic | 45.0% | |
| GAAACAGACACGAAAGGTGA+CGG | - | chr5_2:68274339-68274358 | Msa0783960:intron | 45.0% | |
| TCTGCGCTCAGCATAAAACT+GGG | + | chr5_2:68274552-68274571 | None:intergenic | 45.0% | |
| TTCTGCGCTCAGCATAAAAC+TGG | + | chr5_2:68274553-68274572 | None:intergenic | 45.0% | |
| ! | TTTGACCAGGCAGCAGATTT+TGG | - | chr5_2:68274873-68274892 | Msa0783960:intron | 45.0% |
| TGAATCCAAAATCTGCTGCC+TGG | + | chr5_2:68274881-68274900 | None:intergenic | 45.0% | |
| CTTCATCTGCTGCTGATACA+CGG | + | chr5_2:68275214-68275233 | None:intergenic | 45.0% | |
| CCTCTCTCACAGTAACTGCT+AGG | + | chr5_2:68273325-68273344 | None:intergenic | 50.0% | |
| CCTAGCAGTTACTGTGAGAG+AGG | - | chr5_2:68273322-68273341 | Msa0783960:three_prime_UTR | 50.0% | |
| AGCAGTTACTGTGAGAGAGG+TGG | - | chr5_2:68273325-68273344 | Msa0783960:three_prime_UTR | 50.0% | |
| AGGTTACATTGAGCGCGAAG+AGG | - | chr5_2:68274044-68274063 | Msa0783960:CDS | 50.0% | |
| !! | GGAGGGACACAATTTTGACC+AGG | - | chr5_2:68274860-68274879 | Msa0783960:intron | 50.0% |
| ! | AGTTTGTCGTTTGGAGCCGT+TGG | - | chr5_2:68274930-68274949 | Msa0783960:intron | 50.0% |
| CCTCTCTCACAGTAACTGCT+AGG | + | chr5_2:68273325-68273344 | None:intergenic | 50.0% | |
| CCTAGCAGTTACTGTGAGAG+AGG | - | chr5_2:68273322-68273341 | Msa0783960:three_prime_UTR | 50.0% | |
| AGCAGTTACTGTGAGAGAGG+TGG | - | chr5_2:68273325-68273344 | Msa0783960:three_prime_UTR | 50.0% | |
| AGGTTACATTGAGCGCGAAG+AGG | - | chr5_2:68274044-68274063 | Msa0783960:CDS | 50.0% | |
| !! | GGAGGGACACAATTTTGACC+AGG | - | chr5_2:68274860-68274879 | Msa0783960:intron | 50.0% |
| ! | AGTTTGTCGTTTGGAGCCGT+TGG | - | chr5_2:68274930-68274949 | Msa0783960:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 68273150 | 68275260 | 68273150 | ID=Msa0783960;Name=Msa0783960 |
| chr5_2 | mRNA | 68273150 | 68275260 | 68273150 | ID=Msa0783960-mRNA-1;Parent=Msa0783960;Name=Msa0783960-mRNA-1;_AED=0.19;_eAED=0.19;_QI=134|1|1|1|0.85|0.75|8|432|202 |
| chr5_2 | exon | 68273150 | 68273497 | 68273150 | ID=Msa0783960-mRNA-1:exon:20440;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68273733 | 68273880 | 68273733 | ID=Msa0783960-mRNA-1:exon:20439;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68273968 | 68274080 | 68273968 | ID=Msa0783960-mRNA-1:exon:20438;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68274174 | 68274254 | 68274174 | ID=Msa0783960-mRNA-1:exon:20437;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68274345 | 68274397 | 68274345 | ID=Msa0783960-mRNA-1:exon:20436;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68274573 | 68274681 | 68274573 | ID=Msa0783960-mRNA-1:exon:20435;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68274799 | 68274858 | 68274799 | ID=Msa0783960-mRNA-1:exon:20434;Parent=Msa0783960-mRNA-1 |
| chr5_2 | exon | 68274998 | 68275260 | 68274998 | ID=Msa0783960-mRNA-1:exon:20433;Parent=Msa0783960-mRNA-1 |
| chr5_2 | five_prime_UTR | 68275127 | 68275260 | 68275127 | ID=Msa0783960-mRNA-1:five_prime_utr;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68274998 | 68275126 | 68274998 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68274799 | 68274858 | 68274799 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68274573 | 68274681 | 68274573 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68274345 | 68274397 | 68274345 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68274174 | 68274254 | 68274174 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68273968 | 68274080 | 68273968 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | CDS | 68273817 | 68273880 | 68273817 | ID=Msa0783960-mRNA-1:cds;Parent=Msa0783960-mRNA-1 |
| chr5_2 | three_prime_UTR | 68273733 | 68273816 | 68273733 | ID=Msa0783960-mRNA-1:three_prime_utr;Parent=Msa0783960-mRNA-1 |
| chr5_2 | three_prime_UTR | 68273150 | 68273497 | 68273150 | ID=Msa0783960-mRNA-1:three_prime_utr;Parent=Msa0783960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
